Citrus Sinensis ID: 005147
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJR3 | 845 | Protein SPA1-RELATED 3 OS | yes | no | 0.834 | 0.702 | 0.616 | 0.0 | |
| Q94BM7 | 794 | Protein SPA1-RELATED 4 OS | no | no | 0.806 | 0.722 | 0.571 | 0.0 | |
| Q9SYX2 | 1029 | Protein SUPPRESSOR OF PHY | no | no | 0.773 | 0.535 | 0.356 | 8e-95 | |
| Q9T014 | 1036 | Protein SPA1-RELATED 2 OS | no | no | 0.299 | 0.205 | 0.459 | 6e-54 | |
| P93471 | 672 | E3 ubiquitin-protein liga | N/A | no | 0.466 | 0.494 | 0.344 | 3e-50 | |
| P43254 | 675 | E3 ubiquitin-protein liga | no | no | 0.477 | 0.503 | 0.321 | 5e-46 | |
| Q8NHY2 | 731 | E3 ubiquitin-protein liga | yes | no | 0.417 | 0.406 | 0.317 | 2e-37 | |
| Q9R1A8 | 733 | E3 ubiquitin-protein liga | yes | no | 0.259 | 0.252 | 0.410 | 1e-36 | |
| Q9LTJ6 | 385 | WD repeat-containing prot | no | no | 0.171 | 0.316 | 0.343 | 3e-13 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.223 | 0.143 | 0.257 | 4e-13 |
| >sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/654 (61%), Positives = 499/654 (76%), Gaps = 60/654 (9%)
Query: 49 ENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108
++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV AAHSQGIVVHNV
Sbjct: 59 DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIVNAAHSQGIVVHNV 118
Query: 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168
RPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S RR
Sbjct: 119 RPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS------------RR 162
Query: 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 228
E+ +S+A ++ Y +K+L+ ++ + EEK QPFPMK
Sbjct: 163 EEA---------VSKAIAIEEKGVY------------NKLLERKIEKLE-EEKTQPFPMK 200
Query: 229 QILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288
IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK+RTMSSLRHRVLP
Sbjct: 201 HILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEKSRTMSSLRHRVLP 260
Query: 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 348
PQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EEREAAIELR++I+E+
Sbjct: 261 PQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEEREAAIELRDRIEEQ 320
Query: 349 ELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDD-- 406
E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G S ++ + DD
Sbjct: 321 ESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGS--SLSDFSKDDHQ 378
Query: 407 -LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSL 464
SG + S + + SA + SRKR R L L + E D+ ++ +L
Sbjct: 379 YTSGQPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTL 426
Query: 465 FKSSRLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNL 522
+SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N
Sbjct: 427 LESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNP 486
Query: 523 GSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG 580
+ + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSSNLVC+L+FDR+G
Sbjct: 487 VAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREG 546
Query: 581 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640
ELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNSYIKSQIASSNF+G
Sbjct: 547 ELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDG 606
Query: 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
VVQ+WDV+RSQ++TEM+EH++RVWSID SSADPTLLASGSDDG+VKLWSINQ +
Sbjct: 607 VVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTVKLWSINQGV 660
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Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/682 (57%), Positives = 475/682 (69%), Gaps = 108/682 (15%)
Query: 27 SDGVE-LTHGDHLR---------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK 76
+DG + L+H D++R N GGL D V A+E DVSLRQWLD P
Sbjct: 23 TDGSKSLSHIDYVRSLLGSHKEANLGGLDD--------DSIVRALECEDVSLRQWLDNPD 74
Query: 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS 136
RSVD +EC H+FRQIVEIV AAHSQGIVVHNVRPSCFVMSSFN+VSFIESASCSDSGS
Sbjct: 75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNNVSFIESASCSDSGS-- 132
Query: 137 HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196
+E T++ E
Sbjct: 133 -DEDATTKSRE------------------------------------------------- 142
Query: 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256
+ ++ +IL R + +Q E KKQPFPMKQIL ME +WY S EE G+ +CASDIY
Sbjct: 143 ---IGSSRQEEILSERRSKQQEEVKKQPFPMKQILAMEMSWYTSHEEDNGSLCNCASDIY 199
Query: 257 RLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316
RLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M
Sbjct: 200 RLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSM 259
Query: 317 GELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFI 376
ELLQSEF+NEPR+++EEREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S +
Sbjct: 260 SELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLL 319
Query: 377 CSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPEL 436
SDI++V K+Q +L++KG D + + SRKR R
Sbjct: 320 SSDIDQVVKRQLVLQQKG-------------------------RDVRSFLASRKRIRQGA 354
Query: 437 QLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG--- 493
+ EE +D+ +++ L E +L +SSRLM+N KKLES YF TR R +K +
Sbjct: 355 ETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAE 414
Query: 494 RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK 552
+PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSK
Sbjct: 415 KPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSK 468
Query: 553 LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612
LRVKADL QGDLLNSSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVV
Sbjct: 469 LRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVV 528
Query: 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672
E+ASRSKLS ICWNSYIKSQ+ASSNFEGVVQVWDV+R+Q++TEM+EHE+RVWSID+SSAD
Sbjct: 529 ELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSAD 588
Query: 673 PTLLASGSDDGSVKLWSINQAI 694
PTLLASGSDDGSVKLWSINQ +
Sbjct: 589 PTLLASGSDDGSVKLWSINQGV 610
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Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 229/642 (35%), Positives = 348/642 (54%), Gaps = 91/642 (14%)
Query: 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 125
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 126 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185
+ +D SD E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 186 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236
+ S ++V +Q+ + N ++V V K+ +E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS-----MSTWLEEQ 440
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 296
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 297 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLL 356
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA E+ ELLL FL
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICE-DDSVKSTAAAEEI------SELLLHFLS 553
Query: 357 LVQ-QRKQESAKKLQDIVSFICSDIEEVSKQQA----ILRKKGGLGSFAELANDDLSGLN 411
++ Q+K++++K LQDI + + DI+E ++ + ++R G + + +
Sbjct: 554 SLEVQKKKKASKLLQDIQT-LEDDIKEAERRYSSNVSLVRSHGAIEKRVQSS-------- 604
Query: 412 IPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLM 471
+D C+ S F P T N +R LM
Sbjct: 605 -----PLDEHCTT---SSALFVP----------------------TANTDR-------LM 627
Query: 472 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSE 530
N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++
Sbjct: 628 SNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTK 678
Query: 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK 590
G+ S + F EGLCK+ +SK + GDLLNS+++VCSLSFD D E AAAG++K
Sbjct: 679 GKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISK 738
Query: 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS 650
KIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+WD
Sbjct: 739 KIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTG 798
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
Q ++ EH++R WS+DFS +DPT SGSDD SVKLWSIN+
Sbjct: 799 QGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINE 840
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Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 149/224 (66%), Gaps = 11/224 (4%)
Query: 469 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY 528
RL++N +LESAYF R P R +R + L N +++ + + E +
Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETW 686
Query: 529 SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV 588
S R G F +GLCKY +SK + L +L N+SN++CSL FDRD + FA AGV
Sbjct: 687 SSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGV 743
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
+KKIK++E +++ NE+ DIHYP +EM +RSKLS +CWN+YI++ +ASS+++G+V++WDV+
Sbjct: 744 SKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVT 803
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
Q ++ EHE+R WS+DFS A PT LASGSDD SVKLW+IN+
Sbjct: 804 TGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 847
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Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 204/386 (52%), Gaps = 54/386 (13%)
Query: 332 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA--- 388
ME+ EA + ++LL+FL ++++K + K++Q + FI DI V K +
Sbjct: 150 MEQEEAERNM-------QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLY 202
Query: 389 -----------ILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQ 437
+L GG S + + SGL LN+ S + + + ++
Sbjct: 203 RARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQIS 262
Query: 438 LH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSG 493
H H + D + D+Q N +G +L + R+ F L+ Y R + KP G
Sbjct: 263 SHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHG 319
Query: 494 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 553
+ ER + N S+EGYS G ++ F L + +S+L
Sbjct: 320 Q-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRL 353
Query: 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
RV A++ GD+ +S+N+V S+ FDRD +LFA AGV+++IKVF+ A++NE D H PVVE
Sbjct: 354 RVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVE 413
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
M +RSKLS + WN Y K+QIASS++EG+V VW ++ + L E EHE+R WS+DFS DP
Sbjct: 414 MTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRTDP 473
Query: 674 TLLASGSDDGSVKLWSINQAILLLHL 699
++L SGSDD VK+W NQ +L++
Sbjct: 474 SMLVSGSDDCKVKVWCTNQEASVLNI 499
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E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Pisum sativum (taxid: 3888) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 206/383 (53%), Gaps = 43/383 (11%)
Query: 332 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA-IL 390
+ ER+ +E E ++LL+FL ++++K + ++Q + +I DI V + + +
Sbjct: 148 LAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLY 207
Query: 391 RKKGGLGSFAELANDDLS------------GLNIPSLNIIDNDCSATMGSRK-RFRPELQ 437
R + + DD S G N SL+I + ++K + +
Sbjct: 208 RARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGS 267
Query: 438 LHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPL 496
H L +K L+G++ +SL +S+ M K++ + + L C L
Sbjct: 268 SHGLP---------KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------L 310
Query: 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 556
+ QL+ + + N++S + +EGYS G + F L + +S+LRV
Sbjct: 311 QKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVI 359
Query: 557 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616
A++ GD+ +S+N+V S+ FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM++
Sbjct: 360 AEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMST 419
Query: 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676
RSKLS + WN + K+ IASS++EG+V VWDV+ Q L E EHE+R WS+DFS +P++L
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSML 479
Query: 677 ASGSDDGSVKLWSINQAILLLHL 699
SGSDD VK+W Q ++++
Sbjct: 480 VSGSDDCKVKVWCTRQEASVINI 502
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E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 172/359 (47%), Gaps = 62/359 (17%)
Query: 334 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 393
+++ +E + ++L+EFL + ++ K+E +++Q +S + DI+ V +
Sbjct: 247 QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS------ 300
Query: 394 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 453
G ++ ++ D +P S+ + S + +P
Sbjct: 301 ---GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPPG-----FSGSSQTKKQPW 348
Query: 454 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 513
+N T R RL +F+ LE YF TR S++S D RT+ L
Sbjct: 349 YNSTLASRRK-----RLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL- 389
Query: 514 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVC 572
+ F E L K+ ++ +R A L+ DL N S++V
Sbjct: 390 ------------------------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 425
Query: 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632
S+ FDRD + FA AGV KKIKV+E D +I + DIHYP EM SK+S I W+SY K+
Sbjct: 426 SIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 485
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
+ASS++EG V +WD Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 486 LASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 544
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 121/224 (54%), Gaps = 39/224 (17%)
Query: 469 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY 528
RL +F+ LE YF TR S++S D RT+ L
Sbjct: 361 RLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL---------------- 391
Query: 529 SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVCSLSFDRDGELFAAAG 587
+ F E L K+ ++ +R A L+ DL N S++V S+ FDRD + FA AG
Sbjct: 392 ---------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG 442
Query: 588 VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647
V KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 443 VTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG 502
Query: 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 503 FTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 546
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9LTJ6|RUP1_ARATH WD repeat-containing protein RUP1 OS=Arabidopsis thaliana GN=RUP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 79/128 (61%), Gaps = 6/128 (4%)
Query: 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSI 623
S+ + ++ FD GE+ A G+ +KI+ + +++ E+RD H E + + +KLSS+
Sbjct: 69 TGSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESYICTPAKLSSL 127
Query: 624 CWNSYIKSQ-IASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLL-ASGS 680
W + I S +++GVV +DV + ++E EH RR+WS+D++ + +L+ ASGS
Sbjct: 128 KWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGS 187
Query: 681 DDGSVKLW 688
DDG+V++W
Sbjct: 188 DDGTVQMW 195
|
Functions in association with RUP2 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5. Play a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 89/241 (36%), Gaps = 82/241 (34%)
Query: 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIESASCSDSGSDSHEEGL 141
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 906 CLHIFLQIAEAVQFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 946
Query: 142 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 201
D LVTA D E + + AY TH V
Sbjct: 947 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 978
Query: 202 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261
T Y SPE++ G S DI+ LG++
Sbjct: 979 ---------------------------------TKLYMSPEQIHGNNYSHKVDIFSLGLI 1005
Query: 262 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
LFEL PFST E+ RT++ +R+ PP K+P+E +L P P RP+ ++++
Sbjct: 1006 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPQEHMMVQDMLSPSPMERPEATDIIE 1065
Query: 322 S 322
+
Sbjct: 1066 N 1066
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | ||||||
| 255585740 | 889 | ubiquitin ligase protein cop1, putative | 0.949 | 0.760 | 0.720 | 0.0 | |
| 359493656 | 903 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.963 | 0.759 | 0.687 | 0.0 | |
| 356546870 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.953 | 0.761 | 0.674 | 0.0 | |
| 356542282 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.953 | 0.761 | 0.674 | 0.0 | |
| 357452949 | 875 | SPA1-like protein [Medicago truncatula] | 0.925 | 0.753 | 0.656 | 0.0 | |
| 449446929 | 850 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.908 | 0.761 | 0.689 | 0.0 | |
| 224114936 | 851 | predicted protein [Populus trichocarpa] | 0.859 | 0.719 | 0.692 | 0.0 | |
| 224128308 | 857 | predicted protein [Populus trichocarpa] | 0.890 | 0.739 | 0.687 | 0.0 | |
| 357519507 | 814 | SPA1-like protein [Medicago truncatula] | 0.925 | 0.809 | 0.643 | 0.0 | |
| 330688325 | 662 | SPA3 isoform 2 [Arabidopsis thaliana] | 0.831 | 0.894 | 0.622 | 0.0 |
| >gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/681 (72%), Positives = 572/681 (83%), Gaps = 5/681 (0%)
Query: 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK 74
G S D RK +D V L H + L+NQ GLSG ++E A+DPF AIEWGDVSLRQWLDK
Sbjct: 29 GPLSRDSVFRKKTDRVVLAHHN-LKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDK 87
Query: 75 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134
P+RSVD +ECLHIFRQIV IV AHSQGIVVHNVRPSCFVM+SFNHVSFIESASCSDSGS
Sbjct: 88 PERSVDEFECLHIFRQIVGIVNLAHSQGIVVHNVRPSCFVMTSFNHVSFIESASCSDSGS 147
Query: 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194
DS E+GLN++ +E K+ SS LP D+ Q RTRLR ED Q + P N LSEASC+QSSS +
Sbjct: 148 DSLEDGLNSRTLEVKNPSSLLPNDIFQLRTRLRSEDFQPASTPINALSEASCIQSSSVHA 207
Query: 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254
THV + E +E K D + ++ EE+KQPFPMKQILLMET+WY SPEE G+P SCASD
Sbjct: 208 THVPVGENTEEDKANDRTIIEQEEEERKQPFPMKQILLMETSWYTSPEEATGSPSSCASD 267
Query: 255 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
IYRLGVLLFELFCPFS+ E+K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RP
Sbjct: 268 IYRLGVLLFELFCPFSSREDKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRP 327
Query: 315 KMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVS 374
KM ELLQSEFLNEPR+++EEREAAI+L E+I+E++LLL+FLLL+QQRKQE+A KLQD VS
Sbjct: 328 KMCELLQSEFLNEPRENLEEREAAIQLSERIEEQDLLLDFLLLIQQRKQEAADKLQDTVS 387
Query: 375 FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP 434
+CSDIEEV K + L+KKG GS E DD N+P +I+DND S+++GSRKRFRP
Sbjct: 388 LLCSDIEEVLKHRTFLKKKG--GSCLERMKDDNLVSNLPPFSIVDNDDSSSLGSRKRFRP 445
Query: 435 ELQLHHLEECDDNLDDNQKHNL-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG 493
+Q+ ++EE DDN DD Q ++ T +++ L KSSRLMKNFKKLESAYFLTRCRP++ SG
Sbjct: 446 GIQIFNMEEFDDNRDDAQHSDMVTESQDSLLLKSSRLMKNFKKLESAYFLTRCRPIRSSG 505
Query: 494 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 553
+P +R+S +SSDGR S +V+ERSSINNL KE + E R+SGWI+PFLEGLCKYLSF+KL
Sbjct: 506 KPFIRYSPISSDGRGST-VVSERSSINNLAPKEQHVESRQSGWISPFLEGLCKYLSFNKL 564
Query: 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
++KADL QGDLLNSSNLVCSLSFDRDGE FA AGVNKKIK+FECDAIINENRDIHYPVVE
Sbjct: 565 KIKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVE 624
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
+A+RSKLSS+CWNSYIKSQIASSNFEGVVQVWD++RSQVLTEMREHERRVWSIDFSSADP
Sbjct: 625 IATRSKLSSVCWNSYIKSQIASSNFEGVVQVWDITRSQVLTEMREHERRVWSIDFSSADP 684
Query: 674 TLLASGSDDGSVKLWSINQAI 694
T LASGSDD SVKLW+INQ +
Sbjct: 685 TTLASGSDDCSVKLWNINQGV 705
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/701 (68%), Positives = 557/701 (79%), Gaps = 15/701 (2%)
Query: 2 NPRLLRGERFGVRGDDSND---FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFV 58
NPR R G+ G S+D RK D V +H + +NQ G+S VC+++ A+DPFV
Sbjct: 28 NPRQRHANRIGLSGGASHDSGFISGRKERDHVLSSHTKNHKNQVGISQVCDDDVALDPFV 87
Query: 59 HAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF 118
AIEWGDVSLR WLDKP+R VD ECLHIF QI EIV AAHSQG+VV+NVRPSCFVMSSF
Sbjct: 88 RAIEWGDVSLRHWLDKPERRVDALECLHIFTQIAEIVNAAHSQGVVVNNVRPSCFVMSSF 147
Query: 119 NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178
NHVSFIES SCSDSGSDS E+G N+ E LSS LP D+ R++R ED PT
Sbjct: 148 NHVSFIESVSCSDSGSDSLEDGSNSHTEEDNGLSS-LPDDLHLRKSRSGNEDFLPTIMPT 206
Query: 179 ND----LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234
N LSE SCMQSSS THV LVE +E+K D R +VEQ EEKKQ FPMK+ILLME
Sbjct: 207 NASQIVLSETSCMQSSSVSATHVTLVEDREEYKSTDRR-SVEQSEEKKQTFPMKEILLME 265
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 294
TNWY SPEE++GA SCASDIY+LGVLLFELFC FS+ EEK+RTMS LRHRVLPPQLLLK
Sbjct: 266 TNWYTSPEEISGAQTSCASDIYQLGVLLFELFCTFSSREEKSRTMSCLRHRVLPPQLLLK 325
Query: 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEF 354
+PKEASFCLWLLHPEPS RPK+ EL QSEFL EPRD MEEREAAIELRE+I+E+ELLLEF
Sbjct: 326 WPKEASFCLWLLHPEPSSRPKISELFQSEFLTEPRDKMEEREAAIELRERIEEQELLLEF 385
Query: 355 LLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPS 414
LLL+QQRKQ + KLQD +SF+ SDIEEV KQQA LRK+GG S+ EL DD S ++
Sbjct: 386 LLLMQQRKQGAVDKLQDTISFLSSDIEEVGKQQATLRKRGG--SYQELVKDDQSTSDLSP 443
Query: 415 LNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTG-NEERSLFKSSRLMKN 473
+++ +N+ S ++ S KRFR +HH++E DD L++ QK + N E + KSSRLMKN
Sbjct: 444 MDVDENEDSTSVRSSKRFRQ--GVHHIKELDDTLNNGQKLGMNAENPEILISKSSRLMKN 501
Query: 474 FKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRR 533
FKKLESAY LTR +P KPSG+P + S SS+GR S +V ERSS+NNL SK+ Y+E +
Sbjct: 502 FKKLESAYLLTRRKPTKPSGKPSNKISPPSSNGRGS-IVVTERSSVNNLASKDQYNEHGQ 560
Query: 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593
SGWINPFL+GLCKYLSFSKL+VKADL QGDLLNSSNLVCS+SFDRDGELFA AGVNKKIK
Sbjct: 561 SGWINPFLDGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSVSFDRDGELFATAGVNKKIK 620
Query: 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL 653
VFEC++I+NE+RDIHYP+VEMA RSKLSSICWNSYIKSQIASSNFEGVVQVWDV+RSQVL
Sbjct: 621 VFECNSILNEDRDIHYPLVEMACRSKLSSICWNSYIKSQIASSNFEGVVQVWDVTRSQVL 680
Query: 654 TEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
TEMREHERRVWSID+S ADPT+LASGSDDGSVKLWSINQ +
Sbjct: 681 TEMREHERRVWSIDYSLADPTMLASGSDDGSVKLWSINQGV 721
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/695 (67%), Positives = 549/695 (78%), Gaps = 16/695 (2%)
Query: 2 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRN-QGGLSGVCENEAAIDPFVHA 60
N R+ +R G+ S D RK D L G +N GG SG+CE+E +DPF A
Sbjct: 28 NQRVHCPQRNPFLGEASQDSGFRKERDRFLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCA 87
Query: 61 IEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH 120
+EWGD+SLRQWLDKP+RSV +ECLHIFRQIVEIV AHSQG+VVHNVRPSCFVMSSFNH
Sbjct: 88 VEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFNH 147
Query: 121 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV-TAPTN 179
+SFIESASCSD+GSDS EGLN Q E K +S P DM Q+ + ED V T T
Sbjct: 148 ISFIESASCSDTGSDSLGEGLNNQGGEVKTPTSLCPHDMPQQS--MGSEDFMPVKTLTTP 205
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
S++SCM SS+ Y L+E +E+K+ D R + ++VE KKQ FPMKQILLME +WY
Sbjct: 206 AQSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-DEVEGKKQSFPMKQILLMEMSWYT 264
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 299
SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEA
Sbjct: 265 SPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEA 324
Query: 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQ 359
SFCLWLLHP+PSGRP +GELLQS+FLNE RD MEEREAAIELR++ID++ELLLEFLLL+Q
Sbjct: 325 SFCLWLLHPDPSGRPTLGELLQSDFLNEQRDDMEEREAAIELRQRIDDQELLLEFLLLLQ 384
Query: 360 QRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIID 419
QRKQE A+KLQ VSF+CSDIEEV+KQ ++ G AEL +D+ S + PS+ ++D
Sbjct: 385 QRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG----AELGSDEHSASSFPSMTVVD 440
Query: 420 NDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLES 479
++ SA +G+RKR R + + ++EEC D++ D+QK N + L KSSRLMKNFKKLES
Sbjct: 441 SEGSAFLGTRKRVRLGMDVKNIEECVDDVGDDQKSNGS-----FLSKSSRLMKNFKKLES 495
Query: 480 AYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINP 539
AYFLTRCRP SG+ VRH ++SDGR S ++ ERS IN+L SKE EG S WINP
Sbjct: 496 AYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV-VMTERSCINDLKSKEQCREGA-SAWINP 553
Query: 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599
FLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIKVFECD+
Sbjct: 554 FLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDS 613
Query: 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659
IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSNFEGVVQ+WDV+RSQV++EMREH
Sbjct: 614 IINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREH 673
Query: 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
ERRVWSIDFSSADPT+LASGSDDGSVKLWSINQ +
Sbjct: 674 ERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGV 708
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/695 (67%), Positives = 549/695 (78%), Gaps = 16/695 (2%)
Query: 2 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRN-QGGLSGVCENEAAIDPFVHA 60
N R+ +R G+ S D RK D V L G +N GG SG+CE+E +DPF A
Sbjct: 27 NQRVHCPQRNPFSGEASQDSGFRKERDRVLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCA 86
Query: 61 IEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH 120
+EWGD+SLRQWLDKP+RSVD +ECLHIFRQIVEIV AHSQG+VVHNVRPSCFVMSSFNH
Sbjct: 87 VEWGDISLRQWLDKPERSVDAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFNH 146
Query: 121 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV-TAPTN 179
+SFIESASCSD+GSDS +G+N Q E K +S P DM Q+ L ED + T+ T
Sbjct: 147 ISFIESASCSDTGSDSLGDGMNNQGGEVKTPTSLCPHDMHQQS--LGSEDFMPIKTSTTP 204
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
S++SCM SS+ Y L+E +E+K+ D R + E+VE KKQ FPMKQILLME +WY
Sbjct: 205 ARSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-EEVEGKKQSFPMKQILLMEMSWYT 263
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 299
SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEA
Sbjct: 264 SPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEA 323
Query: 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQ 359
SFCLWLLHP+P RP +GELLQSEFLNE RD EEREAAIELR++I+++ELLLEFLLL+Q
Sbjct: 324 SFCLWLLHPDPKSRPTLGELLQSEFLNEQRDDTEEREAAIELRQRIEDQELLLEFLLLLQ 383
Query: 360 QRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIID 419
QRKQE A+KLQ VSF+CSDIEEV+KQ ++ G AEL +D+ S + PS+ +D
Sbjct: 384 QRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG----AELGSDERSASSFPSMTFVD 439
Query: 420 NDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLES 479
++ SA +G+RKR R + + ++EECDD++ D+QK N + L KSSRLMKNFKKLES
Sbjct: 440 SEDSAFLGTRKRVRLGMDVKNIEECDDDVGDDQKSNGS-----FLSKSSRLMKNFKKLES 494
Query: 480 AYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINP 539
AYFLTRCRP SG+ VRH ++SDGR S +V ERS IN+L SKE EG S WINP
Sbjct: 495 AYFLTRCRPAYSSGKLAVRHPPVTSDGRGS-VVVTERSCINDLKSKEQCREGA-SAWINP 552
Query: 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599
FLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIKVFECD+
Sbjct: 553 FLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDS 612
Query: 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659
IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSNFEGVVQ+WDV+RSQV++EMREH
Sbjct: 613 IINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREH 672
Query: 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
ERRVWSIDFSSADPT+LASGSDDGSVKLWSINQ +
Sbjct: 673 ERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGV 707
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/685 (65%), Positives = 537/685 (78%), Gaps = 26/685 (3%)
Query: 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLD 73
G+ S D RK D + GD +N GG CE E DPF ++EWGD+SLRQWLD
Sbjct: 28 GEGSQDSRFRKERDWIHGAQGDQNKNLGGF---CEGEEVENDPFFSSVEWGDISLRQWLD 84
Query: 74 KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133
KP RSVD +ECLHIFRQIVEIV AAH QG+VVHNVRPSCFVMSSFNH+SFIESASCSD+
Sbjct: 85 KPDRSVDFFECLHIFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTS 144
Query: 134 SDSHEEGLNT-QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192
SDS +G+N Q +E K +S P D++ +++ ED T+ S++SCM SS+
Sbjct: 145 SDSLGDGVNNDQGVEVKTPTSHCPRDIMHQQS-FGSEDFMPAKISTDARSDSSCMLSSAV 203
Query: 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252
Y L+E +E+K+ D R + E+VE KKQ FPMKQILLME +WY SPEE+AG P SCA
Sbjct: 204 YAARASLIEETEENKMKDMRKD-EEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCA 262
Query: 253 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 312
SD+YRLG+LLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+PS
Sbjct: 263 SDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSS 322
Query: 313 RPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDI 372
RP +GELLQSEFLNE RD MEEREAAIELR++I++EELLLEFL L++QRKQE A+KLQ
Sbjct: 323 RPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHT 382
Query: 373 VSFICSDIEEVSKQQAILRKKGGLGSFAELA-NDDLSGLNIPSLNIIDNDCSATMGSRKR 431
+SF+CSDIEEV+K+Q ++ G+ EL +DD S PS+ +ID++ SA +G+RKR
Sbjct: 383 ISFLCSDIEEVTKKQTRFKEIAGV----ELGGSDDRSASTFPSMTVIDSEDSACLGTRKR 438
Query: 432 FRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP 491
R + HL+ECDDN++ +QK N L K+SRLMKNFKKLESAYFLTRC+P
Sbjct: 439 VRLGM---HLDECDDNMESDQK-----NHGSFLSKNSRLMKNFKKLESAYFLTRCKPTYS 490
Query: 492 SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGR--RSGWINPFLEGLCKYLS 549
SGRP VRHS +++ GR S +++ERS IN+L K+ +GR S WINPFLEGLCKYLS
Sbjct: 491 SGRPGVRHSTIANGGRGS-VVMSERSCINSLALKD---QGRDSASAWINPFLEGLCKYLS 546
Query: 550 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHY 609
FSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIK+FECD II +RDIHY
Sbjct: 547 FSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRDIHY 606
Query: 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669
PVVEMA RSKLSS+CWN+YIKSQIASSNFEGVVQ+WDV+RSQ+L+EMREHERRVWSIDFS
Sbjct: 607 PVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFS 666
Query: 670 SADPTLLASGSDDGSVKLWSINQAI 694
SADPT+LASGSDDGSVKLWSINQ +
Sbjct: 667 SADPTMLASGSDDGSVKLWSINQGV 691
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/660 (68%), Positives = 522/660 (79%), Gaps = 13/660 (1%)
Query: 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95
DHLRN +SGVCE + DP++ + +W D+SLRQWLDKP RSVD ECLHIFRQIVEIV
Sbjct: 20 DHLRNLDDISGVCEEDILADPYLRSHKWSDISLRQWLDKPGRSVDALECLHIFRQIVEIV 79
Query: 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155
AH+QGIVVHNVRPSCFVMSSFNHV+FIESASCSDSGSDS E+G+N+Q E K SSP
Sbjct: 80 NIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDSLEDGINSQMAEVKTSSSPF 139
Query: 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215
P + L E + V P N LSE SCMQSSS Y L EG + + D R ++
Sbjct: 140 P-------SSLGSEGFRSVMTPINALSETSCMQSSSIYAAQASLNEGFGKFRKKDRR-HI 191
Query: 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 275
E+ E+K Q FPMKQIL MET WY SPEE + +P S ASDIYRLGVLLFELFC FS+ EEK
Sbjct: 192 EETEDKVQSFPMKQILAMETTWYTSPEEASDSPSSSASDIYRLGVLLFELFCSFSSREEK 251
Query: 276 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
RTMSSLRHRVLP QLLLK+PKEASFCLWLLHPEP+ RPK+ ELLQS FLNEP+D +EER
Sbjct: 252 NRTMSSLRHRVLPTQLLLKWPKEASFCLWLLHPEPTNRPKLSELLQSVFLNEPKDDLEER 311
Query: 336 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 395
EAAI+LR++I+E+ELLLEFLLL+QQRKQE+A KLQD +SF+CSDIE+V + Q +K
Sbjct: 312 EAAIKLRKKIEEQELLLEFLLLMQQRKQEAAHKLQDTISFLCSDIEQVMRHQTNFKK--N 369
Query: 396 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 455
+GS +L D+ LN+PS+ + N SA +GSRKRFRP + H +E C DNLD K +
Sbjct: 370 IGSHTDLVKDNHLPLNLPSMPPVRNTDSAALGSRKRFRPGILTHDIEACGDNLDHCSKTS 429
Query: 456 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 514
NE+ LFKSSRLMKNFKKLE AYFL R R KPS R V+HS +SSDGR S L
Sbjct: 430 SENDNEQGVLFKSSRLMKNFKKLELAYFLMRGRVNKPS-RQFVKHSSVSSDGRGSVVLT- 487
Query: 515 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 574
ERSS+NNL SKE ++ R+ GWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVCSL
Sbjct: 488 ERSSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSL 547
Query: 575 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634
SFDRDGE FA AGVN+KIKVF D+I+NE+RDIHYPVVEMASRSKLSS+CWN YIKSQIA
Sbjct: 548 SFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIA 607
Query: 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
SSNFEGVVQVWDV+RSQV+TEM EHERRVWSIDFSSADPT+LASGSDDGSVKLWSINQ I
Sbjct: 608 SSNFEGVVQVWDVTRSQVVTEMGEHERRVWSIDFSSADPTILASGSDDGSVKLWSINQGI 667
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/651 (69%), Positives = 530/651 (81%), Gaps = 39/651 (5%)
Query: 37 HLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95
+L+NQ G LSGVCE+EAA+D F+ IEW DVSLR WLDKP+RSV+ +EC HIFRQ+VE+V
Sbjct: 51 NLKNQAGTLSGVCEDEAAVDRFMQTIEWNDVSLRHWLDKPQRSVNEFECSHIFRQVVEVV 110
Query: 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155
AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS ++GLN++ ME K+ SS L
Sbjct: 111 NVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLDDGLNSETMEVKNSSSSL 170
Query: 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215
P DM Q+R +V LVE +EHK+ D R NV
Sbjct: 171 PHDMCQQR--------------------------------NVPLVEETEEHKVHDMR-NV 197
Query: 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 275
E EE+KQPFPMKQILLME+ WY SPEE AG+P SCASDIYRLGVLLFELFCPF++ E+K
Sbjct: 198 EHEEERKQPFPMKQILLMESCWYTSPEEDAGSPSSCASDIYRLGVLLFELFCPFTSSEDK 257
Query: 276 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+RTMSSLRHRVLPPQLLLK+ KEASFCLWLLHPEPS RPK+GELLQS+FLNEP +++EE
Sbjct: 258 SRTMSSLRHRVLPPQLLLKWSKEASFCLWLLHPEPSSRPKIGELLQSDFLNEPINNLEEL 317
Query: 336 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 395
EAA +LRE+I+E+ELLLEFLLL+QQRKQ++A KLQD +S +CSDIEEV+K Q L+KKG
Sbjct: 318 EAATQLRERIEEQELLLEFLLLIQQRKQDAADKLQDTISLLCSDIEEVTKHQVFLKKKGD 377
Query: 396 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 455
+ E D NIP+LN++D D S+++GSRKRF P L++H++E+CDDNLD++Q +
Sbjct: 378 --TCKERGEGDHLTSNIPALNVVDIDDSSSLGSRKRFCPGLEIHNVEKCDDNLDESQNSD 435
Query: 456 -LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRHSQLSSDGRTSKPLV 513
++E LF+SSRLMKNFKKLESAYFLTRCRPV+P G+P R+ + SDGR S +
Sbjct: 436 TFVESQESPLFRSSRLMKNFKKLESAYFLTRCRPVRPPGKPSFARNLPVISDGRISI-VA 494
Query: 514 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCS 573
ERSSIN++ K+ ++EGRRSGWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVCS
Sbjct: 495 TERSSINSIAPKQQFTEGRRSGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCS 554
Query: 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633
+SFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM RSKLSSICWNSYIKSQ+
Sbjct: 555 ISFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVCRSKLSSICWNSYIKSQL 614
Query: 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684
ASSNFEGVVQVWDV+RSQV+TEMREHERRVWS+DFSSADPT+LASGSDDGS
Sbjct: 615 ASSNFEGVVQVWDVTRSQVVTEMREHERRVWSVDFSSADPTMLASGSDDGS 665
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/675 (68%), Positives = 536/675 (79%), Gaps = 41/675 (6%)
Query: 23 LRKHSDGVELTHGDHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81
RK +D V L +L+NQ G LSGVCE+EAA+D FV +EW DVSLR WL+KP+RSVD
Sbjct: 37 FRKETDRVVLAR-QNLKNQAGTLSGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDE 95
Query: 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 141
+ECLHIFRQIVEIV AHSQGIVVHNVRPSCFVMSSFNHVSFIESAS SDSGSDS ++GL
Sbjct: 96 FECLHIFRQIVEIVNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASYSDSGSDSLDDGL 155
Query: 142 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 201
N Q +E K+ SS DM Q+R ++ L E
Sbjct: 156 NRQTVEVKNASS-FSHDMCQQR--------------------------------NLPLGE 182
Query: 202 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261
+E+K+L R NVE EE+KQPFPMKQILLME++WY SPEE+AG+P SCASDIY+LGVL
Sbjct: 183 ETEENKVLGTR-NVEHEEERKQPFPMKQILLMESSWYTSPEEVAGSPSSCASDIYQLGVL 241
Query: 262 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
LFELF PF++ E+K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKMGELLQ
Sbjct: 242 LFELFSPFTSREDKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLQ 301
Query: 322 SEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIE 381
SEFLNEPRD +EEREAAI+LRE+I+E+ELLLEFLL +QQRKQ++A KLQ VS +CSDIE
Sbjct: 302 SEFLNEPRDYLEEREAAIQLRERIEEQELLLEFLLPMQQRKQDAANKLQGTVSLLCSDIE 361
Query: 382 EVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHL 441
EV+K Q L+KKG + E D N+P LNI D D S+++GSRKRF LQ+ +
Sbjct: 362 EVTKHQTFLKKKGS--TCKERGEGDHLASNLPPLNIYDIDDSSSLGSRKRFCSGLQILNT 419
Query: 442 EECDDNLDDNQKHN-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRH 499
E CDDNL++ + + ++E LF+SSRLMKNFKKLESAYFLTR RPV+P G+P VR+
Sbjct: 420 EGCDDNLNEGRNSDTFVESQESPLFRSSRLMKNFKKLESAYFLTRSRPVRPPGKPPFVRN 479
Query: 500 SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559
S +S DGR S +V ERSSIN+L K+ + +GR+SGWI+PFLEGLCKYLS+SKL+VKADL
Sbjct: 480 SPVSGDGRGSI-VVTERSSINSLALKDRFIKGRQSGWISPFLEGLCKYLSYSKLKVKADL 538
Query: 560 NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619
QGDLLNSSNLVCSLSFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM SRSK
Sbjct: 539 KQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSK 598
Query: 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679
LSSICWN YI SQIASSNFEGVVQVWDV+RSQV+TEMREHERRVWSIDFSSADPT+LASG
Sbjct: 599 LSSICWNRYITSQIASSNFEGVVQVWDVTRSQVVTEMREHERRVWSIDFSSADPTMLASG 658
Query: 680 SDDGSVKLWSINQAI 694
SDDGSVKLWSINQ +
Sbjct: 659 SDDGSVKLWSINQGV 673
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357519507|ref|XP_003630042.1| SPA1-like protein [Medicago truncatula] gi|355524064|gb|AET04518.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/688 (64%), Positives = 531/688 (77%), Gaps = 29/688 (4%)
Query: 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLD 73
G+ S D RK D + GD +N GG CE E DPF ++EWGD+SLRQWLD
Sbjct: 28 GEGSQDSRFRKERDWIHGAQGDQNKNLGGF---CEGEEVENDPFFSSVEWGDISLRQWLD 84
Query: 74 KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133
KP RSVD +ECLHIFRQIVEIV AAH QG+VVHNVRPSCFVMSSFNH+SFIESASCSD+
Sbjct: 85 KPDRSVDFFECLHIFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTS 144
Query: 134 SDSHEEGLNT-QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192
SDS +G+N Q +E K +S P D++ +++ ED T+ S++SCM SS+
Sbjct: 145 SDSLGDGVNNDQGVEVKTPTSHCPRDIMHQQS-FGSEDFMPAKISTDARSDSSCMLSSAV 203
Query: 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252
Y L+E +E+K+ D R + E+VE KKQ FPMKQILLME +WY SPEE+AG P SCA
Sbjct: 204 YAARASLIEETEENKMKDMRKD-EEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCA 262
Query: 253 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 312
SD+YRLG+LLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+PS
Sbjct: 263 SDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSS 322
Query: 313 RPKMGEL---LQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKL 369
RP +G L + NE RD MEEREAAIELR++I++EELLLEFL L++QRKQE A+KL
Sbjct: 323 RPTLGSLQGVVAERVPNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKL 382
Query: 370 QDIVSFICSDIEEVSKQQAILRKKGGLGSFAELA-NDDLSGLNIPSLNIIDNDCSATMGS 428
Q +SF+CSDIEEV+K+Q ++ G+ EL +DD S PS+ +ID++ SA +G+
Sbjct: 383 QHTISFLCSDIEEVTKKQTRFKEIAGV----ELGGSDDRSASTFPSMTVIDSEDSACLGT 438
Query: 429 RKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRP 488
RKR R + HL+ECDDN++ +QK N L K+SRLMKNFKKLESAYFLTRC+P
Sbjct: 439 RKRVRLGM---HLDECDDNMESDQK-----NHGSFLSKNSRLMKNFKKLESAYFLTRCKP 490
Query: 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGR--RSGWINPFLEGLCK 546
SGRP VRHS +++ GR S +++ERS IN+L K+ +GR S WINPFLEGLCK
Sbjct: 491 TYSSGRPGVRHSTIANGGRGS-VVMSERSCINSLALKD---QGRDSASAWINPFLEGLCK 546
Query: 547 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606
YLSFSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIK+FECD II +RD
Sbjct: 547 YLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRD 606
Query: 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSI 666
IHYPVVEMA RSKLSS+CWN+YIKSQIASSNFEGVVQ+WDV+RSQ+L+EMREHERRVWSI
Sbjct: 607 IHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSI 666
Query: 667 DFSSADPTLLASGSDDGSVKLWSINQAI 694
DFSSADPT+LASGSDDGSVKLWSINQ +
Sbjct: 667 DFSSADPTMLASGSDDGSVKLWSINQGV 694
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|330688325|gb|AEC32933.1| SPA3 isoform 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/652 (62%), Positives = 500/652 (76%), Gaps = 60/652 (9%)
Query: 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112
IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV AAHSQGIVVHNVRPSC
Sbjct: 63 GIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIVNAAHSQGIVVHNVRPSC 122
Query: 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172
FVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S RRE+
Sbjct: 123 FVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS------------RREEA- 165
Query: 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL 232
+S+A ++ Y +K+L+ ++ + EEK QPFPMK IL
Sbjct: 166 --------VSKAIAIEEKGVY------------NKLLERKIEKLE-EEKTQPFPMKHILA 204
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 292
MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK+RTMSSLRHRVLPPQ+L
Sbjct: 205 METSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEKSRTMSSLRHRVLPPQIL 264
Query: 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLL 352
LK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EEREAAIELR++I+E+E LL
Sbjct: 265 LKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEEREAAIELRDRIEEQESLL 324
Query: 353 EFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDD---LSG 409
EFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G S ++ + DD SG
Sbjct: 325 EFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGS--SLSDFSKDDHQYTSG 382
Query: 410 LNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSLFKSS 468
+ S + + SA + SRKR R L L + E D+ ++ +L +SS
Sbjct: 383 QPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTLLESS 430
Query: 469 RLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKE 526
RLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N + +
Sbjct: 431 RLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPK 490
Query: 527 GY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFA 584
+ ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSSNLVC+L+FDR+GELFA
Sbjct: 491 AFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREGELFA 550
Query: 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644
AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNSYIKSQIASSNF+GVVQ+
Sbjct: 551 TAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQI 610
Query: 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696
WDV+RSQ++TEM+EH++RVWSID SSADPTLLASGSDDG+VKLWSINQAIL+
Sbjct: 611 WDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTVKLWSINQAILI 662
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 712 | ||||||
| TAIR|locus:2037005 | 794 | SPA4 "SPA1-related 4" [Arabido | 0.376 | 0.337 | 0.611 | 5.3e-147 | |
| TAIR|locus:2136133 | 1036 | SPA2 "SPA1-related 2" [Arabido | 0.299 | 0.205 | 0.428 | 1.6e-82 | |
| TAIR|locus:2039139 | 1029 | SPA1 "SUPPRESSOR OF PHYA-105 1 | 0.304 | 0.210 | 0.418 | 1.1e-79 | |
| DICTYBASE|DDB_G0288453 | 970 | DDB_G0288453 "E3 ubiquitin-pro | 0.241 | 0.177 | 0.474 | 3.1e-36 | |
| TAIR|locus:2059359 | 675 | COP1 "CONSTITUTIVE PHOTOMORPHO | 0.271 | 0.285 | 0.421 | 1.8e-35 | |
| RGD|1304773 | 433 | Rfwd2 "ring finger and WD repe | 0.227 | 0.374 | 0.447 | 6.2e-34 | |
| UNIPROTKB|H0Y339 | 566 | RFWD2 "E3 ubiquitin-protein li | 0.227 | 0.286 | 0.453 | 6e-31 | |
| ZFIN|ZDB-GENE-070410-134 | 694 | rfwd2 "ring finger and WD repe | 0.227 | 0.233 | 0.460 | 3.1e-30 | |
| UNIPROTKB|Q8NHY2 | 731 | RFWD2 "E3 ubiquitin-protein li | 0.227 | 0.221 | 0.453 | 9.1e-30 | |
| UNIPROTKB|F1MHX1 | 735 | RFWD2 "Uncharacterized protein | 0.227 | 0.220 | 0.447 | 2e-29 |
| TAIR|locus:2037005 SPA4 "SPA1-related 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 840 (300.8 bits), Expect = 5.3e-147, Sum P(2) = 5.3e-147
Identities = 170/278 (61%), Positives = 209/278 (75%)
Query: 421 DCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESA 480
D + + SRKR R + EE +D+ +++ L E +L +SSRLM+N KKLES
Sbjct: 339 DVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESV 398
Query: 481 YFLTRCRPVKPSG---RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGW 536
YF TR R +K + +PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GW
Sbjct: 399 YFATRYRQIKAATAAEKPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGW 452
Query: 537 INPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFE 596
I+PFLEGLCKYLSFSKLRVKADL QGD FDRDGE FA AGVNKKIK+FE
Sbjct: 453 IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFE 512
Query: 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM 656
C++II + RDIHYPVVE+ASRSKLS ICWNSYIKSQ+ASSNFEGVVQVWDV+R+Q++TEM
Sbjct: 513 CESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEM 572
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694
+EHE+RVWSID+SSADPTLLASGSDDGSVKLWSINQ +
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
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| TAIR|locus:2136133 SPA2 "SPA1-related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 482 (174.7 bits), Expect = 1.6e-82, Sum P(3) = 1.6e-82
Identities = 96/224 (42%), Positives = 139/224 (62%)
Query: 469 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY 528
RL++N +LESAYF R P R +R + L N +++ + + E +
Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETW 686
Query: 529 SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAAAGV 588
S R G F +GLCKY +SK + L + FDRD + FA AGV
Sbjct: 687 SSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGV 743
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
+KKIK++E +++ NE+ DIHYP +EM +RSKLS +CWN+YI++ +ASS+++G+V++WDV+
Sbjct: 744 SKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVT 803
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
Q ++ EHE+R WS+DFS A PT LASGSDD SVKLW+IN+
Sbjct: 804 TGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINE 847
|
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| TAIR|locus:2039139 SPA1 "SUPPRESSOR OF PHYA-105 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 488 (176.8 bits), Expect = 1.1e-79, Sum P(2) = 1.1e-79
Identities = 95/227 (41%), Positives = 141/227 (62%)
Query: 467 SSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSK 525
+ RLM N ++LE AYF R + + S ++ R+ K L + +R S N ++
Sbjct: 623 TDRLMSNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQ 673
Query: 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAA 585
+ ++G+ S + F EGLCK+ +SK + GD FD D E AA
Sbjct: 674 DMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAA 733
Query: 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645
AG++KKIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+W
Sbjct: 734 AGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIW 793
Query: 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
D Q ++ EH++R WS+DFS +DPT SGSDD SVKLWSIN+
Sbjct: 794 DAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINE 840
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| DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 84/177 (47%), Positives = 112/177 (63%)
Query: 514 NERSSINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXX 572
N S++NNL + E G+ G ++ F L K+ +++ +V A L GD
Sbjct: 615 NTNSNLNNLNNNIESLKVGK--GLLS-FSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVS 671
Query: 573 XXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632
FDRD E FA AGV KKIK+FE I +N ++H PV EM RSK+S + WN+YIKSQ
Sbjct: 672 SIEFDRDEEYFATAGVTKKIKIFEFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQ 730
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
IASS++EG++ +WD + Q + + EHE+RVWS+DFS DPT LASGSDD VKLWS
Sbjct: 731 IASSDYEGIISLWDANTGQNIMTLEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWS 787
|
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| TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 408 (148.7 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 86/204 (42%), Positives = 125/204 (61%)
Query: 496 LVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 555
L + QL+ D SK N++S + +EGYS G + F L + +S+LRV
Sbjct: 310 LQKRRQLA-DQPNSKQ-ENDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRV 358
Query: 556 KADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615
A++ GD FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM+
Sbjct: 359 IAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS 418
Query: 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675
+RSKLS + WN + K+ IASS++EG+V VWDV+ Q L E EHE+R WS+DFS +P++
Sbjct: 419 TRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSM 478
Query: 676 LASGSDDGSVKLWSINQAILLLHL 699
L SGSDD VK+W Q ++++
Sbjct: 479 LVSGSDDCKVKVWCTRQEASVINI 502
|
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| RGD|1304773 Rfwd2 "ring finger and WD repeat domain 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 6.2e-34, Sum P(2) = 6.2e-34
Identities = 73/163 (44%), Positives = 97/163 (59%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 84 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 143
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 144 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 203
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 204 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 246
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| UNIPROTKB|H0Y339 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 74/163 (45%), Positives = 98/163 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 217 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 276
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 277 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 336
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 337 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 379
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| ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 3.1e-30, Sum P(3) = 3.1e-30
Identities = 75/163 (46%), Positives = 98/163 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R ++ F+E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 345 DSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 404
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKVFE +I + DIHYPV EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 405 TKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 464
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 465 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 507
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| UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 9.1e-30, Sum P(3) = 9.1e-30
Identities = 74/163 (45%), Positives = 98/163 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 382 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 544
|
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| UNIPROTKB|F1MHX1 RFWD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 73/163 (44%), Positives = 97/163 (59%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 386 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 505
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N
Sbjct: 506 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTN 548
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LJR3 | SPA3_ARATH | No assigned EC number | 0.6162 | 0.8342 | 0.7029 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_Genewise1_v1.C_LG_XI3877 | hypothetical protein (851 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 712 | |||
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.0 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-14 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-13 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-12 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 9e-12 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 7e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-09 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 4e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-07 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-06 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-06 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-06 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-04 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 0.002 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.002 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.003 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 764 bits (1974), Expect = 0.0
Identities = 389/671 (57%), Positives = 465/671 (69%), Gaps = 98/671 (14%)
Query: 32 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQ 90
L+H D++R+ G + D V A+E DVSLRQWLD P RSVD +EC H+FRQ
Sbjct: 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQ 88
Query: 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKD 150
IVEIV AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD E+ ++
Sbjct: 89 IVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD--EDATTKS----RE 142
Query: 151 LSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210
+ S RRE+ IL
Sbjct: 143 IGSS------------RREE-------------------------------------ILS 153
Query: 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFS 270
R + E KKQPFPMKQIL ME +WY SPEE G+ +CASD+YRLGVLLFELFCP S
Sbjct: 154 ERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS 213
Query: 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330
+ EEK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+
Sbjct: 214 SREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRE 273
Query: 331 SMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAIL 390
++EEREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L
Sbjct: 274 NLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVL 333
Query: 391 RKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP-ELQLHHLEECDDNLD 449
++KG +D + + SRKR R L EE DDN
Sbjct: 334 QQKG-------------------------SDVRSFLASRKRIRQGAETLAAEEENDDN-- 366
Query: 450 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRHSQLSS-D 505
L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S +
Sbjct: 367 ---SSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSEN 423
Query: 506 GRTSKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563
GR+S E+SS++N + ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGD
Sbjct: 424 GRSS-----EKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGD 478
Query: 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 623
LLNSSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS I
Sbjct: 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 538
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
CWNSYIKSQ+ASSNFEGVVQVWDV+RSQ++TEM+EHE+RVWSID+SSADPTLLASGSDDG
Sbjct: 539 CWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598
Query: 684 SVKLWSINQAI 694
SVKLWSINQ +
Sbjct: 599 SVKLWSINQGV 609
|
Length = 793 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630
V ++F DG+L A + IKV++ + + +++ +Y+
Sbjct: 12 VTCVAFSPDGKLLATGSGDGTIKVWD----LETGELLRTLKGHTGPVRDVAASADGTYL- 66
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
AS + + +++WD+ + + + H V S+ FS D +L+S S D ++K+W +
Sbjct: 67 ---ASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDV 122
Query: 691 NQ 692
Sbjct: 123 ET 124
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630
V S++F DGE ++ + IK+++ + + R + + ++
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK--------CLGTL--RGHENGVNSVAFSP 229
Query: 631 SQ--IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688
+AS + +G ++VWD+ + + + H V S+ + S D LASGS DG++++W
Sbjct: 230 DGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAW-SPDGKRLASGSADGTIRIW 288
Query: 689 S 689
Sbjct: 289 D 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 8e-12
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 23/148 (15%)
Query: 558 DLNQGDLLNS----SNLVCSLSFDRDGELFAAAGVNKKIKVFE-----CDAIINENRDIH 608
DL G+ + + ++ V S++F DG + +++ +K IKV++ C + + D
Sbjct: 79 DLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTD-- 136
Query: 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDF 668
V +S+ ++ + +ASS+ +G +++WD+ + + + H V S+ F
Sbjct: 137 -WV---------NSVAFSPD-GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAF 185
Query: 669 SSADPTLLASGSDDGSVKLWSINQAILL 696
S D L S S DG++KLW ++ L
Sbjct: 186 -SPDGEKLLSSSSDGTIKLWDLSTGKCL 212
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 9e-12
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYI 629
V S++F DG A++ + IK+++ H V +S+ + S
Sbjct: 138 VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV--------NSVAF-SPD 188
Query: 630 KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
++ SS+ +G +++WD+S + L +R HE V S+ FS D LLASGS+DG++++W
Sbjct: 189 GEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSP-DGYLLASGSEDGTIRVWD 247
Query: 690 I 690
+
Sbjct: 248 L 248
|
Length = 289 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 7e-11
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLL 292
Y +PE L G A DI+ LGV+L+EL PF ++ + + P
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 293 LKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
EA LL +P R E LQ F
Sbjct: 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP---PQL 291
T Y +PE G P S SDI+ LG LL+E+ F+ E R+M LR++V P +
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM-ATFAPPFE-ARSMQDLRYKVQRGKYPPI 221
Query: 292 LLKFPKEAS-FCLWLLHPEPSGRPKMGELLQS 322
+ ++ F +L +P RP ++L S
Sbjct: 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 235 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T WY +PE L G D++ LGV+L+EL PFS E L R+L P
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFS--GENILDQLQLIRRILGPP 218
Query: 291 LLLKFPKE-------ASFCLWLLHPEPSGRPKMGELLQSEFL 325
L PK L+ +PS RP E+LQ +
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.8 bits (138), Expect = 1e-08
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 572 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631
SF DG L A+ + I++++ + + R + S + S+ ++
Sbjct: 245 VVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL------SGHSSSVLSVAFSPD-GK 297
Query: 632 QIASSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
+AS + +G V++WD+ ++L+ + HE V S+ FS L++ GSDDG+++LW
Sbjct: 298 LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357
Query: 690 INQAILLLHL 699
+ L L
Sbjct: 358 LRTGKPLKTL 367
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.8 bits (138), Expect = 1e-08
Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 41/224 (18%)
Query: 514 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCS 573
N+ + + + L L L DL+ L + + S
Sbjct: 11 NKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITS 70
Query: 574 LSFDRDGELFAAAGVNKKIKVFECD----------------------------------- 598
++F DGEL + + IK+++ D
Sbjct: 71 IAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASS 130
Query: 599 ------AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV 652
+ + + ++S+ ++ K + S+ +G +++WD+ +
Sbjct: 131 SLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKP 190
Query: 653 LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696
L+ + H V S+ FS L+ASGS DG+++LW ++ LL
Sbjct: 191 LSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.8 bits (125), Expect = 4e-07
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 563 DLLNSSNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621
L V SLSF DG L + G + I++++ + S +
Sbjct: 323 TLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH--------SNVL 374
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681
S+ ++ + + S +G V++WD+S +L + H RV S+DFS D LASGS
Sbjct: 375 SVSFSPDGRVVSSGST-DGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSP-DGKSLASGSS 432
Query: 682 DGSVKLWSIN 691
D +++LW +
Sbjct: 433 DNTIRLWDLK 442
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 4e-07
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
++L ++ H V S+ FS D LLASGSDDG+V++W
Sbjct: 2 KLLRTLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 51.3 bits (124), Expect = 5e-07
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQL 291
Y SPE P + SDI+ LG +L+EL PF + + L ++L P +
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF-----EGENLLELALKILKGQYPPI 223
Query: 292 LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFL 325
++ E + LL +P RP + ++LQS F+
Sbjct: 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-06
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
++L ++ H V S+ FS D LASGSDDG++KLW
Sbjct: 3 ELLKTLKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 180 DLSEASCMQSSSAYGTHVVLVE--GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237
DL+ +C+ SS T VV V GM + +LD+ E FP+K
Sbjct: 125 DLAARNCLVSS----TGVVKVSDFGMTRY-VLDD----EYTSSSGAKFPVK--------- 166
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PF-STGEEKTRTMSSLRHRVLPPQLL 292
++ PE + S SD++ GVL++E+F PF + M S R+ P+L
Sbjct: 167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA 226
Query: 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQS 322
E + W H +P GRP ELL++
Sbjct: 227 SMTVYEVMYSCW--HEKPEGRPTFAELLRA 254
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.5 bits (119), Expect = 2e-06
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 560 NQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRS 618
L S V SL+F DG+L A+ ++ IK+++ + + +
Sbjct: 147 LIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWD----LRTGKPLS---TLAGHTD 199
Query: 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678
+SS+ ++ IAS + +G +++WD+S ++L FS D +LLAS
Sbjct: 200 PVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP-DGSLLAS 258
Query: 679 GSDDGSVKLWSIN 691
GS DG+++LW +
Sbjct: 259 GSSDGTIRLWDLR 271
|
Length = 466 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 294
Y SPE + G S A+DI+ LG+ L E PF + + ++ P L
Sbjct: 166 YMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-FFELMQAICDGPPPSLP 224
Query: 295 FPKEAS--FCLWL---LHPEPSGRPKMGELLQSEFLNE 327
+E S F ++ L +P RP ELLQ F+ +
Sbjct: 225 -AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 203 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262
++E +LD V+ + P K ++ T Y +PE L G P S ++DIY LGV+L
Sbjct: 165 LEEEDLLDIDVDERNICYSSMTIPGK---IVGTPDYMAPERLLGVPASESTDIYALGVIL 221
Query: 263 FE-LFCPFSTGEEKTRTMSSLRHRVLPPQ 290
++ L F +K R + S R +L P
Sbjct: 222 YQMLTLSFPYRRKKGRKI-SYRDVILSPI 249
|
Length = 932 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700
+ H V + FS D LLA+GS DG++K+W + LL L
Sbjct: 6 KGHTGGVTCVAFS-PDGKLLATGSGDGTIKVWDLETGELLRTLK 48
|
Length = 289 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 289
T Y SPE L P +SD++ LG +++++ PF E T + PP
Sbjct: 185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILKLEYSFPP 243
Query: 290 QLLLKFPKEAS-FCLWLLHPEPSGRP----KMGELLQSEF 324
FP +A LL +P R EL F
Sbjct: 244 ----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS---SLRHRVLP 288
T +Y +PE P S +D++ LGVLL+EL PF GE M + R+ LP
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD-GENMEEVMHKTLAGRYDPLP 266
Query: 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320
P + P+ LL +P RP +LL
Sbjct: 267 PSI---SPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 227 MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF----CPFST-GEEKTRTMSS 281
+KQI + W A PE L + SD++ G+LL+E F P+ ++TR
Sbjct: 154 LKQIPI---KWTA-PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209
Query: 282 LRHRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQS 322
+R+ PQL E + L L +P RP E+
Sbjct: 210 SGYRMPAPQLC----PEEIYRLMLQCWAYDPENRPSFSEIYNE 248
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 40.5 bits (93), Expect = 0.002
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 17/117 (14%)
Query: 235 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHRV 286
T Y +PE L G A S +SDI+ LG+ L+EL T + +
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230
Query: 287 LPPQLLLKFPKE---------ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334
P L + LL +P R L + L + +
Sbjct: 231 PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287
|
Length = 384 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFEL----FCPFSTGEEKTRTMSSLRHRVL--- 287
T+ Y +PE + G S SDI+ LG+ L EL F P+ + + L ++
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF-PYPPENDPPDGIFELLQYIVNEP 220
Query: 288 PPQLLL-KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 326
PP+L KF + F L +P RP ELL+ F+
Sbjct: 221 PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 712 | |||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.98 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.98 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.98 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.98 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.97 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.96 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.96 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.96 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.96 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.96 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.96 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.96 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.96 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.96 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.96 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.96 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.95 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.95 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.95 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.95 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.95 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.95 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.95 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.95 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.95 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.95 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.95 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.95 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.95 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.94 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.94 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.94 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.94 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.94 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.94 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.94 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.94 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.94 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.94 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.94 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.94 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.94 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.94 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.94 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.94 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.94 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.94 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.94 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.94 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.94 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.94 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.94 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.94 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.94 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.94 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.94 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.94 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.94 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.94 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.94 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.93 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.93 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.93 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.93 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.93 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.93 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.93 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.93 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.93 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.93 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.93 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.93 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.93 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.93 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.93 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.93 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.93 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.93 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.93 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.93 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.93 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.93 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.93 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.93 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.93 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.93 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.93 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.93 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.93 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.93 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.93 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.93 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.93 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.93 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.93 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.93 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.93 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.92 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.92 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.92 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.92 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.92 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.92 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.92 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.92 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.92 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.92 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.92 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.92 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.91 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.91 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 99.91 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.91 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.91 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.9 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.9 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.9 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.9 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.9 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.9 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.89 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.89 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.89 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.89 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.88 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.88 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.88 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.87 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.87 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.87 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.87 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.87 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.87 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.87 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.87 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.86 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.86 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.86 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.86 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.86 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.85 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.84 | |
| PTZ00421 | 493 | coronin; Provisional | 99.84 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.84 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.84 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.83 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.83 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.83 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.83 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.83 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.82 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.82 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.82 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.81 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.81 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.8 | |
| PTZ00421 | 493 | coronin; Provisional | 99.8 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.8 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.79 | |
| PTZ00420 | 568 | coronin; Provisional | 99.79 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.79 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.79 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.78 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.78 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.78 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.78 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.77 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.77 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.76 | |
| KOG1332 | 299 | consensus Vesicle coat complex COPII, subunit SEC1 | 99.76 | |
| PTZ00420 | 568 | coronin; Provisional | 99.76 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.75 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.75 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.75 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.75 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.75 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.75 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.75 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.75 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.75 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.74 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.74 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.73 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.72 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.72 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.72 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.72 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 99.71 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.71 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.71 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.7 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.7 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.7 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.7 | |
| KOG0269 | 839 | consensus WD40 repeat-containing protein [Function | 99.69 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.69 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.69 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.69 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.68 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.68 | |
| KOG0269 | 839 | consensus WD40 repeat-containing protein [Function | 99.68 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.68 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.68 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.67 | |
| KOG0267 | 825 | consensus Microtubule severing protein katanin p80 | 99.67 | |
| KOG0270 | 463 | consensus WD40 repeat-containing protein [Function | 99.67 | |
| KOG0290 | 364 | consensus Conserved WD40 repeat-containing protein | 99.67 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.66 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.66 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.65 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.65 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.65 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.65 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.64 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.64 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.64 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.64 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.64 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.63 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.63 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.63 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 99.63 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.62 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 99.62 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.61 | |
| KOG2445 | 361 | consensus Nuclear pore complex component (sc Seh1) | 99.61 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=625.85 Aligned_cols=581 Identities=65% Similarity=1.018 Sum_probs=426.0
Q ss_pred eeccCCC-CCcccccccc---cccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 31 ELTHGDH-LRNQGGLSGV---CENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 31 ~l~~~~H-~ni~~~~~~~---~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
-++.+.| +||+.+++.+ ..+......++.++|+.+++|.+||..+.+.+++.+++.|++||+.||+|||++||+||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr 104 (793)
T PLN00181 25 GSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVH 104 (793)
T ss_pred ccchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 3556777 6777777732 12233345788899999999999997666679999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+..|.+|++|||++...+.+. ...+++.|||+++.........
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-- 156 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDE--------------------------DATTKSREIGSSRREEILSERR-- 156 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccc--------------------------cCcccccccccccccccccccc--
Confidence 999999999999999999999997654321 1234567998876421100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. ..........++......+||++|||||++.+..|+.++|||||||+||||+
T Consensus 157 ---------------------~------~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 157 ---------------------I------EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ---------------------h------hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 0 0000111122333334468999999999999999999999999999999999
Q ss_pred CCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHHHHHHHHHHhhhh
Q 005147 267 CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQID 346 (712)
Q Consensus 267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e~~~~~~~~e~~~ 346 (712)
+|+.+.......+..+.....|+......+....++.+||.++|.+||++.|+|+||||......+.+++......+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~ 289 (793)
T PLN00181 210 CPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIE 289 (793)
T ss_pred hCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhh
Confidence 98877665555555565555666555566777799999999999999999999999999986555555455445555556
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHhhhhcHHHHHHHHHHHHhhCCCCcchhcccccCCCCCCCCccccCCCCCccc
Q 005147 347 EEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATM 426 (712)
Q Consensus 347 ~~e~l~~fl~~~~~~k~~~~~~lq~el~~Le~Di~eve~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (712)
+.+.+++++...++++++++.+++.++++|+.||+++++|+......+... ....
T Consensus 290 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~ 344 (793)
T PLN00181 290 EQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFL 344 (793)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc-------------------------cccc
Confidence 667778888888899999999999999999999999998665432211110 1122
Q ss_pred CcccccccccccccccccccccccccccCCCCCcccchhhhhhhhhhHhHHHHHHHhhccCCCCCCC---CCccc-cccc
Q 005147 427 GSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVR-HSQL 502 (712)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~y~~~~~~~~~~~~---~~~~~-~~~~ 502 (712)
..++++..+..+...++.... ..+.......+.+++++|||++|++|+++||.+|++....+. ++..+ +...
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (793)
T PLN00181 345 ASRKRIRQGAETLAAEEENDD----NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSAL 420 (793)
T ss_pred ccchhhhccccchhhcccccc----ccccccccccccchhhhHHHHHHHHHHHHHhhhhhcccccccccccccccccccc
Confidence 334444443322221111110 000012234567788999999999999999999986533211 11111 2333
Q ss_pred CCCCCCCCccccCCCCCCceeeccCC-CccceecccCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCC
Q 005147 503 SSDGRTSKPLVNERSSINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE 581 (712)
Q Consensus 503 ~~~g~~~~~~~~~~~~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~ 581 (712)
+.+|++.. ..+..+...-.+.+ .......|+.+|.+|++++|+..+.++...++.+++.+|.+.|++++|+|+++
T Consensus 421 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~ 496 (793)
T PLN00181 421 SENGRSSE----KSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGE 496 (793)
T ss_pred cccccccc----ccccccccccccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCC
Confidence 33444430 00101101001111 11236678889999999999999999988888899999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC
Q 005147 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER 661 (712)
Q Consensus 582 ~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~ 661 (712)
+|||||.|++|+|||+..........+.++....+...|.+++|+|+++.+||+|+.||+|+|||+.+++.+..+.+|.+
T Consensus 497 ~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~ 576 (793)
T PLN00181 497 FFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEK 576 (793)
T ss_pred EEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Confidence 99999999999999987543333444556667777889999999998889999999999999999999999999999999
Q ss_pred cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 662 RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 662 ~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.|++++|+|.++.+|+|||.|++|++||++++.++.++
T Consensus 577 ~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~ 614 (793)
T PLN00181 577 RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 614 (793)
T ss_pred CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 99999999878999999999999999999998877654
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=334.38 Aligned_cols=214 Identities=20% Similarity=0.213 Sum_probs=166.5
Q ss_pred cceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 21 ~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
..++-.++..+|+.++|||||++++ +|+.+ +.+|+|+|+ .||.|.+++-..+. +.+...+.+++||+.||.|||
T Consensus 219 ~~~~v~~EieILkkL~HP~IV~~~d-~f~~~---ds~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH 293 (475)
T KOG0615|consen 219 KTRDVQNEIEILKKLSHPNIVRIKD-FFEVP---DSSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH 293 (475)
T ss_pred chhhhHHHHHHHHhcCCCCEEEEee-eeecC---CceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH
Confidence 3344467788999999999999998 66433 233555555 89999999955443 899999999999999999999
Q ss_pred hcCceeccCCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+|||+..+ -.+||+|||+++..|.. .|
T Consensus 294 ~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----------------------------------sf----- 334 (475)
T KOG0615|consen 294 SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----------------------------------SF----- 334 (475)
T ss_pred HcCcccccCCcceEEeccCCcceEEEecccchhhccccc----------------------------------ee-----
Confidence 9999999999999999865 67899999998655422 11
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCcc
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCAS 253 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~s 253 (712)
....+|||.|.|||++.+.. +..++
T Consensus 335 ----------------------------------------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kV 362 (475)
T KOG0615|consen 335 ----------------------------------------------------MKTLCGTPSYVAPEVLASKGVEYYPSKV 362 (475)
T ss_pred ----------------------------------------------------hhhhcCCccccChhheecCCeecccchh
Confidence 01278999999999998766 34588
Q ss_pred chHHHHHHHHHhhCCCCCChhh---HHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 254 DIYRLGVLLFELFCPFSTGEEK---TRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 254 DIwSlGvll~eLl~pf~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|||||||+||-+|++|.++.+. ......+..+.+ |+.+.....+..+||.+||..||++|||+.|+|+||||+.
T Consensus 363 DiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 363 DIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred eeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 9999999999999955444332 224445555443 3444444555669999999999999999999999999997
Q ss_pred CcC
Q 005147 328 PRD 330 (712)
Q Consensus 328 ~~~ 330 (712)
...
T Consensus 443 ~~~ 445 (475)
T KOG0615|consen 443 APC 445 (475)
T ss_pred ccc
Confidence 654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=318.73 Aligned_cols=208 Identities=22% Similarity=0.244 Sum_probs=171.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
+|..+|...+||+||++|+.+|.+.. .+.|+||| +||+|.++++..+ .+++.....|+++|++||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 67778888999999999996653221 46777777 6999999996654 49999999999999999999995 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++..|+|||+|||.+......
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS------------------------------------------------- 232 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS------------------------------------------------- 232 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------------------
Confidence 9999999999999999999999988432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
-....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 233 -------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 233 -------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred -------------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 0112689999999999999999999999999999999
Q ss_pred hhC---CCCCC----hhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+.+ ||.+. ......+..+.....|..... ..++..+|+..||++||.+|||+.|+|+|||++....
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 998 66553 345667777777665555444 4556669999999999999999999999999997755
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=320.44 Aligned_cols=210 Identities=20% Similarity=0.308 Sum_probs=170.1
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
||..-|..++ ||||++|+. ++.+. ...++++|||...+|.++++.+++.+++..++.|++||+.||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~E-vi~d~--~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKE-VIRDN--DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHH-Hhhcc--CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 6666788899 999999988 44222 2289999999999999999877888999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||+.....|||+|||+|+...+..
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Skp------------------------------------------------- 164 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSKP------------------------------------------------- 164 (538)
T ss_pred ccCChhheEecccceeEecccccccccccCC-------------------------------------------------
Confidence 9999999999988999999999997642220
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
| -+.++-|.||+|||++.... |+.+.|||++||+++|
T Consensus 165 ----------------------------------------P--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 165 ----------------------------------------P--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ----------------------------------------C--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 0 02267899999999987655 9999999999999999
Q ss_pred hhC--CCCCChhhHHHHHhhcccC---------------------CCc--------hhhhcCchhHHHHHHcCCCCCCCC
Q 005147 265 LFC--PFSTGEEKTRTMSSLRHRV---------------------LPP--------QLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 265 Ll~--pf~~~~~~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+.+ |.+++....+.+..+..-. +|. -++...++..++|.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 988 8777766555554443211 111 122334555699999999999999
Q ss_pred CCHHHHhcCcCCCCCcC
Q 005147 314 PKMGELLQSEFLNEPRD 330 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~ 330 (712)
|||.++|+||||+....
T Consensus 283 pTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 283 PTASQALQHPFFQVGRA 299 (538)
T ss_pred ccHHHHhcCcccccccc
Confidence 99999999999997643
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=321.94 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=172.2
Q ss_pred eeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 23 ~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+.|++.++++.+.||||+.+|+ ++ +...+.|++++|+.||.|.++|-..++ +++.++.++|+||+.||.|||..+
T Consensus 57 ~~IerEIviMkLi~HpnVl~Lyd-Vw--e~~~~lylvlEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 57 AGIEREIVIMKLIEHPNVLRLYD-VW--ENKQHLYLVLEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred cchhhhhHHHHHhcCCCeeeeee-ee--ccCceEEEEEEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhhhc
Confidence 47899999999999999999999 55 233344555555589999999955554 999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|+||+..+++||+|||++...-..++ -
T Consensus 133 icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl--------------------------------------------L 168 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL--------------------------------------------L 168 (786)
T ss_pred ceeccCCchhhhhhcccCEeeeccceeecccCCcc--------------------------------------------c
Confidence 99999999999999988899999999843211110 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvl 261 (712)
+ ..||.|.|++||++.|.+| +.++||||.||+
T Consensus 169 e-----------------------------------------------TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVI 201 (786)
T KOG0588|consen 169 E-----------------------------------------------TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVI 201 (786)
T ss_pred c-----------------------------------------------ccCCCcccCCchhhcCCCCCCCccccchhHHH
Confidence 1 1579999999999999997 789999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.||+ ||... +....+..+.++.+... ....+++.+||.+||..||++|+|++||++|||+.....
T Consensus 202 LfALLtG~LPFdDd-Nir~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 202 LFALLTGKLPFDDD-NIRVLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHhCCCCCCCc-cHHHHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 999999 88744 34456666666665322 334566669999999999999999999999999887644
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=293.12 Aligned_cols=197 Identities=19% Similarity=0.240 Sum_probs=159.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhh---cCCCCCCChhHHHHHHHHHHHHHHHhhh--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l---~~~~~~l~~~~~~~i~~qil~~l~~lHs-- 100 (712)
.+.-+|++++|||||+.++-.+ .....-++|+||+ .+|+|.+.| ++..+.+++..++++|.|++.||..||+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f--~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSF--IEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhh--hccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 4566799999999999666222 1222347788888 589999988 4566779999999999999999999999
Q ss_pred cC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 101 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 101 ~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
.. |+||||||.||+|+.+|.||+.|||+++.+...
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~------------------------------------------- 181 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK------------------------------------------- 181 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhHhHhcch-------------------------------------------
Confidence 45 999999999999999999999888887543211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.+ ...+.+|||+||+||.+.+.+|+++||||||
T Consensus 182 --~t---------------------------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 182 --TT---------------------------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred --hH---------------------------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 00 1123799999999999999999999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCH
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~ 316 (712)
||++|||.. ||.+. +....-..+.++.+|+.+...++ +...+|..|+..||..||+.
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 999999987 88765 66677778888888776644444 44589999999999999986
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=294.13 Aligned_cols=207 Identities=18% Similarity=0.273 Sum_probs=166.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
|+.-.|+++.|+|+|.++. +| .-...+++|+||++.++.+-|......++...+..|++|++.|+.|||++++|||
T Consensus 50 REIrmLKqLkH~NLVnLiE-VF---rrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHR 125 (396)
T KOG0593|consen 50 REIRMLKQLKHENLVNLIE-VF---RRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHR 125 (396)
T ss_pred HHHHHHHhcccchHHHHHH-HH---HhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecc
Confidence 6777899999999999888 65 3345789999999999988886665669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.+|.+|+||||+++....+ +|.
T Consensus 126 DIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~--------------- 157 (396)
T KOG0593|consen 126 DIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN--------------- 157 (396)
T ss_pred cCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch---------------
Confidence 99999999999999999999999653211 000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
-+.++.|.||+|||.+.| .+|+.++|||++||++.||
T Consensus 158 ------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl 195 (396)
T KOG0593|consen 158 ------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAEL 195 (396)
T ss_pred ------------------------------------------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHH
Confidence 022678999999999988 5699999999999999999
Q ss_pred hC--CCCCChhhHHHHHhhccc--------------------C-CC-----chhhhcCc----hhHHHHHHcCCCCCCCC
Q 005147 266 FC--PFSTGEEKTRTMSSLRHR--------------------V-LP-----PQLLLKFP----KEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~~--------------------~-~~-----~~~~~~~~----~~~~li~~~L~~dP~~R 313 (712)
++ |+.+++........++.. . +| ..+...+| -..+|+..||..||.+|
T Consensus 196 ~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R 275 (396)
T KOG0593|consen 196 LTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDR 275 (396)
T ss_pred hcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccc
Confidence 99 777776655554443321 0 11 11222333 33499999999999999
Q ss_pred CCHHHHhcCcCCCC
Q 005147 314 PKMGELLQSEFLNE 327 (712)
Q Consensus 314 pt~~eiL~hp~~~~ 327 (712)
++.+++|.||||..
T Consensus 276 ~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 276 LSCEQLLHHPYFDG 289 (396)
T ss_pred ccHHHHhcChHHHH
Confidence 99999999999943
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=305.21 Aligned_cols=239 Identities=18% Similarity=0.226 Sum_probs=185.8
Q ss_pred cccccccccCCC--CC--cceeeeccceeeccCCCCCccccccccccc--ccccCceEEEEeeCCccHHHhhcCCCCCCC
Q 005147 7 RGERFGVRGDDS--ND--FELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 7 ~~~~~~~~~~~~--~~--~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~--~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~ 80 (712)
.|+++++++... .. ..-|..|+..+|.+++|+||+.+++ ++.. ......+|+++++.+.+|.+.|+... .++
T Consensus 46 t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~d-i~~p~~~~~f~DvYiV~elMetDL~~iik~~~-~L~ 123 (359)
T KOG0660|consen 46 TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLD-IFRPPSRDKFNDVYLVFELMETDLHQIIKSQQ-DLT 123 (359)
T ss_pred CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEe-ecccccccccceeEEehhHHhhHHHHHHHcCc-ccc
Confidence 467777777663 12 2237889999999999999999999 4433 22455799999999999999995543 499
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
...+..+++||+.||.|+|+.||+||||||+|++++.+..+||+|||+++...... .
T Consensus 124 d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~---------------------- 180 (359)
T KOG0660|consen 124 DDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E---------------------- 180 (359)
T ss_pred HHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC-c----------------------
Confidence 99999999999999999999999999999999999999999999999996542210 0
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
.+ ..+.++.|.||+|
T Consensus 181 --------~~---------------------------------------------------------~mTeYVaTRWYRA 195 (359)
T KOG0660|consen 181 --------DG---------------------------------------------------------FMTEYVATRWYRA 195 (359)
T ss_pred --------cc---------------------------------------------------------chhcceeeeeecC
Confidence 00 0123688999999
Q ss_pred cccccCC-CCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc-------------------------CCC----
Q 005147 241 PEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR-------------------------VLP---- 288 (712)
Q Consensus 241 PE~~~~~-~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~-------------------------~~~---- 288 (712)
||++... .|+.+.||||+||+|.||++ |.+++.+....+..+... ..|
T Consensus 196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f 275 (359)
T KOG0660|consen 196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF 275 (359)
T ss_pred HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH
Confidence 9998654 49999999999999999999 766665444433322210 111
Q ss_pred -chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHHH
Q 005147 289 -PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335 (712)
Q Consensus 289 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e~ 335 (712)
..++...|.+.+|+.+||..||.+|+|++|+|+|||+....++..|+
T Consensus 276 ~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 276 SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 12344456667999999999999999999999999999988776665
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=317.29 Aligned_cols=205 Identities=22% Similarity=0.260 Sum_probs=165.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..+-+.+.|||||++++ +|++.. .+|++.|+ ..++|.++++ ..+.++|.+++.+++||+.||.|||++||||
T Consensus 67 ~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiH 141 (592)
T KOG0575|consen 67 NEIEIHRSLKHPNIVQFYH-FFEDSN---NVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIH 141 (592)
T ss_pred HHHHHHHhcCCCcEEeeee-EeecCC---ceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCcee
Confidence 5666788899999999998 776543 45667776 4899999886 4456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||..||||+.+.+|||+|||++.....+
T Consensus 142 RDLKLGNlfL~~~~~VKIgDFGLAt~le~~-------------------------------------------------- 171 (592)
T KOG0575|consen 142 RDLKLGNLFLNENMNVKIGDFGLATQLEYD-------------------------------------------------- 171 (592)
T ss_pred cccchhheeecCcCcEEecccceeeeecCc--------------------------------------------------
Confidence 999999999999999999999998543221
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+++ ....+|||.|.|||++....+++.+||||+||+||-|
T Consensus 172 ---------------------------------~Er-------k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtL 211 (592)
T KOG0575|consen 172 ---------------------------------GER-------KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTL 211 (592)
T ss_pred ---------------------------------ccc-------cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhh
Confidence 011 1227899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|. ||... .....+..++...+... .....++.+||.+||.++|.+|||+++||.|+||+.-
T Consensus 212 L~G~PPFetk-~vkety~~Ik~~~Y~~P-~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 212 LVGRPPFETK-TVKETYNKIKLNEYSMP-SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred hhCCCCcccc-hHHHHHHHHHhcCcccc-cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 99 55543 33455666655443211 1445666799999999999999999999999999544
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=306.47 Aligned_cols=236 Identities=19% Similarity=0.210 Sum_probs=181.3
Q ss_pred ccccccccccccCC--CCCcce--eeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCC
Q 005147 4 RLLRGERFGVRGDD--SNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (712)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~--r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l 79 (712)
++.+|+-++++..- ..+.+| -..|++.+|..++||||++|.+.+.. .....+|+|+||+..+|.-++..++-.|
T Consensus 138 ~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~--~~~~siYlVFeYMdhDL~GLl~~p~vkf 215 (560)
T KOG0600|consen 138 DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS--KLSGSIYLVFEYMDHDLSGLLSSPGVKF 215 (560)
T ss_pred ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe--cCCceEEEEEecccchhhhhhcCCCccc
Confidence 34455555554432 222344 45589999999999999999986653 3445799999999999999998888789
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchh
Q 005147 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (712)
Q Consensus 80 ~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (712)
++.+++.|++||+.||+|||++||+|||||++||||+.+|.+||+|||+++.+....-
T Consensus 216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~---------------------- 273 (560)
T KOG0600|consen 216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS---------------------- 273 (560)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC----------------------
Confidence 9999999999999999999999999999999999999999999999999965422200
Q ss_pred HHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcccc
Q 005147 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (712)
Q Consensus 160 ~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (712)
.+ -+..+-|.||+
T Consensus 274 -----------------------------------------------------------------~~--~T~rVvTLWYR 286 (560)
T KOG0600|consen 274 -----------------------------------------------------------------AP--YTSRVVTLWYR 286 (560)
T ss_pred -----------------------------------------------------------------cc--cccceEEeecc
Confidence 00 11256799999
Q ss_pred CcccccCCC-CCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc------------CCC------------ch--
Q 005147 240 SPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR------------VLP------------PQ-- 290 (712)
Q Consensus 240 aPE~~~~~~-~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~------------~~~------------~~-- 290 (712)
|||.+.|.. |+.++|+||+||||.||+. |..++......+..+-+. .+| ..
T Consensus 287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~ 366 (560)
T KOG0600|consen 287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR 366 (560)
T ss_pred ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence 999999887 9999999999999999999 766665555555443321 011 00
Q ss_pred --hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 291 --LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 291 --~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+....+...+|+..||..||.+|.||.++|+|+||+..+.
T Consensus 367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 1111123448999999999999999999999999965544
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=281.71 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=187.6
Q ss_pred ccccccccccCCCCC----cceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCCh
Q 005147 6 LRGERFGVRGDDSND----FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (712)
Q Consensus 6 ~~~~~~~~~~~~~~~----~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~ 81 (712)
.+|++++++...-.+ -..-..||...|+.+.|+||+.+++ +|- ....+-+|+|+...+|...|+.....++.
T Consensus 25 ~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~---~~~~l~lVfEfm~tdLe~vIkd~~i~l~p 100 (318)
T KOG0659|consen 25 ETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELID-VFP---HKSNLSLVFEFMPTDLEVVIKDKNIILSP 100 (318)
T ss_pred CCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhh-hcc---CCCceEEEEEeccccHHHHhcccccccCH
Confidence 467777776554432 1234558888999999999999999 553 33467899999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 82 ~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
.++..|+.|++.||+|||++.|+||||||.|+||+++|++|++|||+++.+|.+.-.
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~----------------------- 157 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI----------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-----------------------
Confidence 999999999999999999999999999999999999999999999999877665100
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.+..+-|.||+||
T Consensus 158 -------------------------------------------------------------------~~~~V~TRWYRAP 170 (318)
T KOG0659|consen 158 -------------------------------------------------------------------QTHQVVTRWYRAP 170 (318)
T ss_pred -------------------------------------------------------------------cccceeeeeccCh
Confidence 0113569999999
Q ss_pred ccccCCC-CCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc----------------------CCCch-----h
Q 005147 242 EELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR----------------------VLPPQ-----L 291 (712)
Q Consensus 242 E~~~~~~-~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~----------------------~~~~~-----~ 291 (712)
|.+.|.. |+..+||||.||++.||+- ||++++...+.+..+-.. .+|.. +
T Consensus 171 ELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf 250 (318)
T KOG0659|consen 171 ELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLF 250 (318)
T ss_pred HHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccc
Confidence 9999887 9999999999999999998 999887776666544321 11111 2
Q ss_pred hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 292 ~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
....++..+|+..||.+||.+|+|+.|+|+|+||+..+.+..
T Consensus 251 ~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 251 PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTP 292 (318)
T ss_pred ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCC
Confidence 223345569999999999999999999999999997655443
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=302.19 Aligned_cols=216 Identities=19% Similarity=0.197 Sum_probs=163.7
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+++..+|..++|||||+.++. +. ..+...++++||| .||+|.+++++.+..+++..++.+.+||++||.|||++|||
T Consensus 62 ~~Ei~iL~~l~~p~IV~~~G~-~~-~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 62 EREIRILSRLNHPNIVQYYGS-SS-SRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred HHHHHHHHhCCCCCEEeeCCc-cc-cccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 466778999999999998882 21 1111467888888 69999999976654799999999999999999999999999
Q ss_pred eccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||+|||++. ++.+||+|||.+.........
T Consensus 140 H~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~--------------------------------------------- 174 (313)
T KOG0198|consen 140 HCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK--------------------------------------------- 174 (313)
T ss_pred ccCcccceEEEeCCCCeEEeccCcccccccccccc---------------------------------------------
Confidence 9999999999999 699999999988543210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
+.......||+.|||||++..+. ...++|||||||++
T Consensus 175 ------------------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV 212 (313)
T KOG0198|consen 175 ------------------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV 212 (313)
T ss_pred ------------------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence 00011257899999999998643 34599999999999
Q ss_pred HHhhCCCCCChh----hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFCPFSTGEE----KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||+|+-.++.+ .............|.......++..+|+.+|+..+|++||||.++|+|||.+....
T Consensus 213 vEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 213 VEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999994333332 23333444444444333334445569999999999999999999999999987654
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=305.19 Aligned_cols=219 Identities=18% Similarity=0.252 Sum_probs=165.9
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|...|..+ +||.|++||. .|.|+. .+|.+++| .+|+|.++|++.+. |++..++.++.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 344456667 9999999998 554433 34555555 79999999977654 99999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+++++|+|||.++.++.....
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~---------------------------------------------- 230 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKS---------------------------------------------- 230 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcc----------------------------------------------
Confidence 9999999999999999999999999765433110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
|.+++.. .+. ..+....+||..|.+||++.....++++|||+|||+||.
T Consensus 231 ---~~~~~~~-------------------------~~a---~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 231 ---QENPVDP-------------------------NQA---SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred ---ccCccCc-------------------------ccc---cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 0000000 000 000123799999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+. ||....+. ..++.+.+..+. ++..+ +...+||.++|..||.+|+|+++|.+||||.....
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~--fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYE--FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhccc--CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 999 66654443 455555443321 12223 44559999999999999999999999999998754
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=309.74 Aligned_cols=203 Identities=25% Similarity=0.380 Sum_probs=162.9
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
|+..+++.+. ||||++++. ++... ..++++|||+ ||+|.+++.+ ..++.+.+++.+|+||+.||+|||++||+
T Consensus 68 rEi~~~~~~~~HpnI~~l~e-v~~t~---~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~ 142 (370)
T KOG0583|consen 68 REISILRRLRSHPNIIRLLE-VFATP---TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIV 142 (370)
T ss_pred HHHHHHHHhccCCCEeEEEE-EEecC---CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEe
Confidence 6777888998 999999888 55322 2378888874 7899999976 44599999999999999999999999999
Q ss_pred eccCCCCceeecCC-CcEEEEecccccCCC-CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 105 VHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 105 HrDLkP~NIll~~~-~~vkl~dfg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||+|||++.+ +.+||+|||++.... .+ ++
T Consensus 143 HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~----------- 177 (370)
T KOG0583|consen 143 HRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL----------- 177 (370)
T ss_pred eCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc-----------
Confidence 99999999999998 999999999985431 11 00
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CC-CccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VS-CASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~-~~sDIwSlGv 260 (712)
....+|++.|+|||++.+.. |+ .++||||+||
T Consensus 178 ----------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV 211 (370)
T KOG0583|consen 178 ----------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV 211 (370)
T ss_pred ----------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence 01158999999999999987 74 8999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+||.|++ ||..... ......+....+. +.... .++...|+.+||..+|.+|+|+.+|+.||||+.
T Consensus 212 iLy~ml~G~~PF~d~~~-~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 212 ILYVLLCGRLPFDDSNV-PNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHhCCCCCCCccH-HHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999999 6654332 3344444444332 22222 677779999999999999999999999999997
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=274.41 Aligned_cols=207 Identities=19% Similarity=0.213 Sum_probs=163.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+-..+.||||+.+.. .+ .....++++...+.|++|..-|-++ ..+++..+-++++||+++|+|||.+|||||
T Consensus 59 rEarIC~~LqHP~IvrL~~-ti--~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHR 134 (355)
T KOG0033|consen 59 REARICRKLQHPNIVRLHD-SI--QEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHR 134 (355)
T ss_pred HHHHHHHhcCCCcEeehhh-hh--cccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceec
Confidence 5556667799999999888 33 2223344444445799998766222 347999999999999999999999999999
Q ss_pred cCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||+|+++.+ ..-||++|||++.+.+.....
T Consensus 135 DvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~--------------------------------------------- 169 (355)
T KOG0033|consen 135 DLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW--------------------------------------------- 169 (355)
T ss_pred cCChhheeeeeccCCCceeecccceEEEeCCcccc---------------------------------------------
Confidence 99999999963 345899999999665422111
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.| .+|||.|||||++...+|+.++|||+.||+||
T Consensus 170 ---------------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLf 203 (355)
T KOG0033|consen 170 ---------------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 203 (355)
T ss_pred ---------------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhhHHHH
Confidence 01 68999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
-||. ||.. +...+.+..+..+.+ ++.+....+...+|+++||..||++|+|+.|+|+|||+.+..
T Consensus 204 iLL~G~~PF~~-~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 204 ILLVGYPPFWD-EDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred HHHhCCCCCCC-ccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 9998 5543 344566676666543 346666677778999999999999999999999999998753
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=290.83 Aligned_cols=208 Identities=19% Similarity=0.255 Sum_probs=163.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|+-+|..++||.||++.+ .+ .....+|++.++ .||.|.-.|.+.++ +++..++.++..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sF---Qt~~kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SF---QTEEKLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ec---ccCCeEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 3455788899999999888 44 233456666666 79999999965554 999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+..|+++++|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999995321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00116899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC----CHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~eiL~hp~~~~~~~ 330 (712)
++ ||... +....+..+.+...+....-..+...+++.++|..||.+|. .+.+|-+||||.....
T Consensus 219 L~G~pPF~~~-~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 219 LTGKPPFYAE-DVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred hhCCCCCcCc-cHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 99 55543 33445555554442222222345566999999999999995 6899999999998754
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=286.45 Aligned_cols=215 Identities=20% Similarity=0.263 Sum_probs=173.5
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..|+..+|.+..|||||.+-..+. ..+.+.+|+||+|+..+|...|..-.+++...+++.++.|++.||.|||...|+
T Consensus 122 sLREIniLl~~~H~NIV~vkEVVv--G~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wil 199 (419)
T KOG0663|consen 122 SLREINILLKARHPNIVEVKEVVV--GSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWIL 199 (419)
T ss_pred hHHHHHHHHhcCCCCeeeeEEEEe--ccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeE
Confidence 447888899999999999766444 455667999999999999999977667799999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+|++..|.+|++|||+++.+|++...
T Consensus 200 HRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~---------------------------------------------- 233 (419)
T KOG0663|consen 200 HRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP---------------------------------------------- 233 (419)
T ss_pred ecccchhheeeccCCcEEecccchhhhhcCCccc----------------------------------------------
Confidence 9999999999999999999999999988776100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
-+..+-|.||+|||.+.|.+ |+++.|+||+||++.
T Consensus 234 --------------------------------------------~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 234 --------------------------------------------YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred --------------------------------------------CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence 01256799999999999987 999999999999999
Q ss_pred HhhC--CCCCChhhHHHHHhhcc-------cCCC------------------chhhhcC------chhHHHHHHcCCCCC
Q 005147 264 ELFC--PFSTGEEKTRTMSSLRH-------RVLP------------------PQLLLKF------PKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~--pf~~~~~~~~~~~~~~~-------~~~~------------------~~~~~~~------~~~~~li~~~L~~dP 310 (712)
||+. |.+++.........+-. .+.| ..+...+ ....+|+..+|.+||
T Consensus 270 E~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP 349 (419)
T KOG0663|consen 270 ELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDP 349 (419)
T ss_pred HHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCc
Confidence 9999 77766554444333221 0111 0111111 223489999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|.||.+.|+|+||.+.+.+
T Consensus 350 ~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 350 GKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred cccccHHHhhcccccccCCCC
Confidence 999999999999999986554
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=287.12 Aligned_cols=276 Identities=15% Similarity=0.142 Sum_probs=188.1
Q ss_pred CCcceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhh-cCCCCCCChhHHHHHHHHHHHHHH
Q 005147 19 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 19 ~~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~ 96 (712)
.+...|.+.|..||+.++||-+..||. .++ ..+-+|++|||| ||+|...+ +++++.+++..++.++..++.||+
T Consensus 118 rkKl~Ra~tE~eIL~~lDHPFlPTLYa-~fe---t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALE 193 (459)
T KOG0610|consen 118 RKKLKRAQTEREILSLLDHPFLPTLYA-SFE---TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALE 193 (459)
T ss_pred hhHHHHHHHHHHHHHhcCCCccchhhh-eee---ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHH
Confidence 344458889999999999999999888 442 334578888885 99999987 566778999999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCC-CcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
|||-.|||.|||||+||||.++|+|++.||.++...... .+.. ..+..+.............-|.+..
T Consensus 194 YLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~-----------s~~~~~~~~~~~~~~~~~s~f~~r~ 262 (459)
T KOG0610|consen 194 YLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK-----------SSSPRSSGSQPSCRSRQPSCFSPRC 262 (459)
T ss_pred HHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec-----------cCCCCCCCCCcccccccccccccch
Confidence 999999999999999999999999999999998554111 0000 0000000000000000111121110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
..... ..+-.+...+....+--.-....+++..+||-.|.|||++.|...+.++|+
T Consensus 263 ~~~~~------------------------~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDW 318 (459)
T KOG0610|consen 263 LSSSK------------------------KRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDW 318 (459)
T ss_pred hcccc------------------------ccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhH
Confidence 00000 000000000000000000111124466899999999999999999999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC----HHHHhcCcCCCCC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEP 328 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~eiL~hp~~~~~ 328 (712)
|+|||+|||||. ||.+..........+.+...-+........+.+||+++|.+||++|.. +.||.+||||+..
T Consensus 319 WtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 319 WTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred HHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 999999999997 998777765555555554433333344466679999999999999997 9999999999998
Q ss_pred cCchH
Q 005147 329 RDSME 333 (712)
Q Consensus 329 ~~~~~ 333 (712)
...+.
T Consensus 399 nWaLi 403 (459)
T KOG0610|consen 399 NWALI 403 (459)
T ss_pred Chhhe
Confidence 77543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=300.63 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=165.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..++....|+|||.+++.+... +.++++||| .||+|.+.+.... +++.++..|++.++.||+|||.+||+|
T Consensus 319 nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~gIiH 392 (550)
T KOG0578|consen 319 NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHARGIIH 392 (550)
T ss_pred HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhcceee
Confidence 566778999999999988844322 556666666 7999999884443 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||-+|||+..+|.|||+|||+|..+....
T Consensus 393 rDIKSDnILL~~~g~vKltDFGFcaqi~~~~------------------------------------------------- 423 (550)
T KOG0578|consen 393 RDIKSDNILLTMDGSVKLTDFGFCAQISEEQ------------------------------------------------- 423 (550)
T ss_pred eccccceeEeccCCcEEEeeeeeeecccccc-------------------------------------------------
Confidence 9999999999999999999999995432210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+....+|||+|||||++....|++++||||||++++||
T Consensus 424 -----------------------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM 462 (550)
T KOG0578|consen 424 -----------------------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM 462 (550)
T ss_pred -----------------------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHH
Confidence 011226899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-cCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-RVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+- ||..+.. ..++..+.. +....... ...+...+|+.+||+.||.+|+++.|+|+||||+...
T Consensus 463 veGEPPYlnE~P-lrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 463 VEGEPPYLNENP-LRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred hcCCCCccCCCh-HHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 98 7776444 444444443 33332333 3456666999999999999999999999999995443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=289.35 Aligned_cols=225 Identities=16% Similarity=0.240 Sum_probs=170.8
Q ss_pred ccccccccCCCC--Ccceee--eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChh
Q 005147 8 GERFGVRGDDSN--DFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVY 82 (712)
Q Consensus 8 ~~~~~~~~~~~~--~~~~r~--~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~ 82 (712)
+.+++++..... ....++ ..|..+|+.++|||||++++ +++. .+.+++||||| ||+|.+||++.++ +++.
T Consensus 35 ~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d-~~~~---~~~i~lVMEyC~gGDLs~yi~~~~~-l~e~ 109 (429)
T KOG0595|consen 35 GTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLD-CIED---DDFIYLVMEYCNGGDLSDYIRRRGR-LPEA 109 (429)
T ss_pred CceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEE-EEec---CCeEEEEEEeCCCCCHHHHHHHcCC-CCHH
Confidence 344555444433 333444 57888999999999999998 4432 34677888885 8999999966654 9999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC------CcEEEEecccccCCCCCCcccccccccccccCCCCCCC
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (712)
.+++++.||+.||++||+++||||||||.||||+.. -.+||+|||+++......+
T Consensus 110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~------------------- 170 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM------------------- 170 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH-------------------
Confidence 999999999999999999999999999999999864 3478888888854321100
Q ss_pred chhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCc
Q 005147 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (712)
Q Consensus 157 ~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (712)
....+|++
T Consensus 171 ------------------------------------------------------------------------a~tlcGSp 178 (429)
T KOG0595|consen 171 ------------------------------------------------------------------------AETLCGSP 178 (429)
T ss_pred ------------------------------------------------------------------------HHHhhCCc
Confidence 11268999
Q ss_pred cccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhccc--CCCchhhhcCchhHHHHHHcCCCCCC
Q 005147 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (712)
.|||||++....|+.++|+||+|+++|++++ ||.. ....+....+++. ..|.......+...+++...|..+|.
T Consensus 179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a-~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~ 257 (429)
T KOG0595|consen 179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA-ETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPK 257 (429)
T ss_pred cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc-cCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcc
Confidence 9999999999999999999999999999999 4543 3333444444433 22222223344555899999999999
Q ss_pred CCCCHHHHhcCcCCCCCc
Q 005147 312 GRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~ 329 (712)
.|.+..+.+.|+++....
T Consensus 258 ~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 258 DRISFEDFFDHPFLAANP 275 (429)
T ss_pred ccCchHHhhhhhhcccCc
Confidence 999999999999998765
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=292.24 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=166.9
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++.++|+.+.|||||+|+. +.++.+.+.+|+|.||+ .|.+ .|.......+++.+++.|++.++.||+|||.||||
T Consensus 156 ~~EIailKkl~H~nVV~LiE--vLDDP~s~~~YlVley~s~G~v-~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgii 232 (576)
T KOG0585|consen 156 RREIAILKKLHHPNVVKLIE--VLDDPESDKLYLVLEYCSKGEV-KWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGII 232 (576)
T ss_pred HHHHHHHHhcCCcCeeEEEE--eecCcccCceEEEEEeccCCcc-ccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCee
Confidence 37888999999999999988 44677778888888886 4443 34433333389999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+||+.+|+|||.|||.+..+.....+ ++
T Consensus 233 HRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~------------- 268 (576)
T KOG0585|consen 233 HRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS------------- 268 (576)
T ss_pred ccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-------------
Confidence 9999999999999999999999998433111000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 260 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGv 260 (712)
+ . .....+|||.|+|||.+.++. .+++.|||||||
T Consensus 269 -------------------d---------------~-------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 269 -------------------D---------------D-------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred -------------------H---------------H-------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 0 0 001157999999999998743 578999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.|+. ||..........+.+......+..........+||.+||.+||.+|+++.+|..|||.....+
T Consensus 308 TLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999987 888766654333333333333444445667779999999999999999999999999987744
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=295.22 Aligned_cols=256 Identities=14% Similarity=0.148 Sum_probs=170.9
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
|.||+ +|...+.|.||++|+ .|.+ ...+|++||| +||++..+|.+.+ .|++..++.++.+++.|++.+|..|
T Consensus 189 ~aERd--iL~~~ds~~vVKLyY-sFQD---~~~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~g 261 (550)
T KOG0605|consen 189 RAERD--ILAEVDSPWVVKLYY-SFQD---KEYLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLG 261 (550)
T ss_pred HHHHH--HhhhcCCCcEEEEEE-EecC---CCeeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcC
Confidence 44454 788899999999998 5533 3456777777 7999999995554 4999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|||||||+|+||+..|++|+.|||+|.-.......+ +.......+. . -......||....+..
T Consensus 262 yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~-~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~---- 325 (550)
T KOG0605|consen 262 YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE-SYRLDEQMQI---------N--LSEAKPSDFPKFNTPR---- 325 (550)
T ss_pred cccccCChhheeecCCCCEeeccccccchhhhhhhhh-hhcchhhhhh---------h--hccCCCcccccccccc----
Confidence 9999999999999999999999999995432221100 0000000000 0 0000001110000000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.. ..........+........+.+|||-|||||++.+..|+..+|+|||||++
T Consensus 326 ------------------------~~---~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 326 ------------------------ST---MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred ------------------------ch---hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 00 001111122222222333457999999999999999999999999999999
Q ss_pred HHhhCCCCCC--hhhHHHHHhhcccC---CCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcC
Q 005147 263 FELFCPFSTG--EEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~pf~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~ 330 (712)
||||.+|+++ +........+.... ..|.-....+++.+||.+||. ||.+|. .++||.+||||+...-
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 9999844332 33344555554422 222223334666699999999 999998 5999999999998754
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=280.91 Aligned_cols=220 Identities=19% Similarity=0.255 Sum_probs=169.4
Q ss_pred eeeccceeeccCCCCC-ccccccccccccc--ccCceEEEEeeCCccHHHhhcCCC---CCCChhHHHHHHHHHHHHHHH
Q 005147 24 RKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 24 r~~~~~~~l~~~~H~n-i~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~---~~l~~~~~~~i~~qil~~l~~ 97 (712)
-..|+..+|..+.|+| |+.+++.++.... ....+++++|+...+|..+++... ..++...++.+++||+.||+|
T Consensus 56 taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 56 TAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred hhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 3457888999999999 9999994443331 233788999999999999996544 347888999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||.||+|++.|.+|++|||+++.++.+.-
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~---------------------------------------- 175 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR---------------------------------------- 175 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc----------------------------------------
Confidence 9999999999999999999999999999999965433210
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIw 256 (712)
.-+..++|.||+|||++.|.. |+...|||
T Consensus 176 --------------------------------------------------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiW 205 (323)
T KOG0594|consen 176 --------------------------------------------------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIW 205 (323)
T ss_pred --------------------------------------------------cccccEEEeeccCHHHhcCCCcCCCCcchH
Confidence 011247899999999999984 99999999
Q ss_pred HHHHHHHHhhC--CCCCChhhHHHHHhhccc--------------------CC-----Cchhhh----cCchhHHHHHHc
Q 005147 257 RLGVLLFELFC--PFSTGEEKTRTMSSLRHR--------------------VL-----PPQLLL----KFPKEASFCLWL 305 (712)
Q Consensus 257 SlGvll~eLl~--pf~~~~~~~~~~~~~~~~--------------------~~-----~~~~~~----~~~~~~~li~~~ 305 (712)
|+||+++||++ |.+++.........+-.. .+ +..+.. ..+...+++.+|
T Consensus 206 s~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~ 285 (323)
T KOG0594|consen 206 SLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKL 285 (323)
T ss_pred hHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHH
Confidence 99999999999 665554443333322110 00 001111 113455999999
Q ss_pred CCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 306 LHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 306 L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
|+.+|.+|.|+..+|.||||........
T Consensus 286 L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 286 LQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred hccCcccCcCHHHHhcChhhcccccchh
Confidence 9999999999999999999998866433
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=288.18 Aligned_cols=215 Identities=18% Similarity=0.210 Sum_probs=168.4
Q ss_pred eccceeeccCCCCCcccccccccccccc-cCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
-+|..+|..++|||||.+...++..... .....+++||...+|.+.++. .++.++..+++-+..||++||.|||+.
T Consensus 65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 4667788899999999999855544433 235667999999999999953 356699999999999999999999999
Q ss_pred CceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||.|+|++++ |.+||+|||+++.....+
T Consensus 145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e-------------------------------------------- 180 (364)
T KOG0658|consen 145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE-------------------------------------------- 180 (364)
T ss_pred CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC--------------------------------------------
Confidence 99999999999999966 899999999996542210
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlG 259 (712)
..+++.-+..|+|||.+.|.. |+.+.||||.|
T Consensus 181 -----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaG 213 (364)
T KOG0658|consen 181 -----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAG 213 (364)
T ss_pred -----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhh
Confidence 011256699999999999987 99999999999
Q ss_pred HHHHHhhC--CCCCChhhHHHHHhhccc-------------------CCCc---------hhhhcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC--PFSTGEEKTRTMSSLRHR-------------------VLPP---------QLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~--pf~~~~~~~~~~~~~~~~-------------------~~~~---------~~~~~~~~~~~li~~~L~~d 309 (712)
|+++||+- |.++++.....+..+.+- .+|. ......++..+|+.++|.++
T Consensus 214 CV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~ 293 (364)
T KOG0658|consen 214 CVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYS 293 (364)
T ss_pred HHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccC
Confidence 99999998 766665444444333211 0111 11122356669999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|.++.|+|.||||...+++
T Consensus 294 P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 294 PSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhhcCCHHHHhcchhhHHhhCc
Confidence 9999999999999999988764
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-33 Score=281.70 Aligned_cols=207 Identities=20% Similarity=0.309 Sum_probs=169.8
Q ss_pred eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 23 ~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
.+..|+..|++.+|||||+.+|. +|+ +.+.++|+||| .+|.|.+|+...+ .|++.+++++|+||+.||.|||.+
T Consensus 98 vhIRREIeIMSsLNHPhII~IyE-VFE---NkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHkn 172 (668)
T KOG0611|consen 98 VHIRREIEIMSSLNHPHIIQIYE-VFE---NKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKN 172 (668)
T ss_pred HHHHHHHHHHhhcCCCceeehhh-hhc---CCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhc
Confidence 46668888999999999999887 663 44567888888 5999999995554 499999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
+|+|||||.+|||++.+|++||+|||++..+.... |
T Consensus 173 rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k----------------------------------f---------- 208 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK----------------------------------F---------- 208 (668)
T ss_pred cceecccchhheeecCCCCeeeeccchhhhhcccc----------------------------------H----------
Confidence 99999999999999999999999999984332211 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (712)
...++|+|.|++||+++|.+| ++.+|-|||||
T Consensus 209 -----------------------------------------------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGv 241 (668)
T KOG0611|consen 209 -----------------------------------------------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGV 241 (668)
T ss_pred -----------------------------------------------HHHhcCCcccCCccccCCCCCCCCccchhhHHH
Confidence 112689999999999999997 68999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+||-|+. ||.+.+.. ....++..+.+... ....+...||+|||..+|.+|.|+.+|..|=|++--
T Consensus 242 LLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP--~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg 309 (668)
T KOG0611|consen 242 LLYTLVYGTMPFDGRDHK-RLVRQISRGAYREP--ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWG 309 (668)
T ss_pred HHHHHhhcccccCCchHH-HHHHHhhcccccCC--CCCchHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence 9999997 88765543 55556665554321 233456689999999999999999999999887743
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-33 Score=270.69 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=163.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.+.||.++.+++ .+. ....++++|++ .||.|..+|++.++ +++..++.++.||+.||+|||+.+|++|
T Consensus 94 Ek~vL~~v~~PFlv~l~~-t~~---d~~~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiYR 168 (355)
T KOG0616|consen 94 EKRVLKAVSHPFLVKLYG-TFK---DNSNLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIYR 168 (355)
T ss_pred HHHHHhhccCceeEEEEE-eec---cCCeEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeeec
Confidence 445688889999999776 443 33456677776 89999999977665 9999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.+|.+||+|||+++.....
T Consensus 169 DLKPENiLlD~~G~iKitDFGFAK~v~~r--------------------------------------------------- 197 (355)
T KOG0616|consen 169 DLKPENLLLDQNGHIKITDFGFAKRVSGR--------------------------------------------------- 197 (355)
T ss_pred cCChHHeeeccCCcEEEEeccceEEecCc---------------------------------------------------
Confidence 99999999999999999999998542111
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+|||.|+|||++...+|+.++|.|+|||++|||+
T Consensus 198 ------------------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl 235 (355)
T KOG0616|consen 198 ------------------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML 235 (355)
T ss_pred ------------------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH
Confidence 11268999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC--CCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||..... ...+..+..+. +|..+ .++..+|+..+|+.|-.+|. ...+|..||||+...
T Consensus 236 aG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 236 AGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred cCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 9 6655544 45566655543 33332 46677999999999999994 578999999999753
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=286.18 Aligned_cols=202 Identities=16% Similarity=0.217 Sum_probs=159.8
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+|+++.+|.+++|+||+.+.+ +|... --|||+|||+ .|-|.+.|+.. +.++......|.++|+.|+.|||.+.|
T Consensus 159 kETdIKHLRkLkH~NII~FkG-VCtqs---PcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKI 233 (904)
T KOG4721|consen 159 KETDIKHLRKLKHPNIITFKG-VCTQS---PCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKI 233 (904)
T ss_pred hhhhHHHHHhccCcceeeEee-eecCC---ceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhH
Confidence 568888999999999999777 88443 3589999996 88999999554 458888889999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||.-||||+.+..|||+|||.++....-
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~------------------------------------------------ 265 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDK------------------------------------------------ 265 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhh------------------------------------------------
Confidence 99999999999999999999999987432100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.+.+.+.||..|||||+++..+++.++|||||||+||
T Consensus 266 -------------------------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLW 302 (904)
T KOG4721|consen 266 -------------------------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLW 302 (904)
T ss_pred -------------------------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHH
Confidence 0123478999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp 323 (712)
|||| ||..-..... +--+....+....+...|+-. -|++.||+..|..||++.+||.|-
T Consensus 303 EmLT~EiPYkdVdssAI-IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 303 EMLTGEIPYKDVDSSAI-IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred HHHhcCCCccccchhee-EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 9999 7764332211 111112222222233344443 688999999999999999999984
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=267.87 Aligned_cols=208 Identities=18% Similarity=0.249 Sum_probs=159.3
Q ss_pred eeccCCCCCccccccccccccccc-CceEEEEee-CCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAI-DPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~-~~~~l~~e~-~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+...-.|||||.+++ +|+..... ..+++|||+ .||.|...| .+....+++.++..|++||..||.|||+.+|.|||
T Consensus 108 Hw~~s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRD 186 (400)
T KOG0604|consen 108 HWMASGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRD 186 (400)
T ss_pred hhhhcCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhcc
Confidence 444578999999999 88765544 467888888 699999999 44455699999999999999999999999999999
Q ss_pred CCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 108 VRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 108 LkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||+|+|.. ++..+|++|||+++..... +
T Consensus 187 lKpENLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~--------------- 218 (400)
T KOG0604|consen 187 LKPENLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------G--------------- 218 (400)
T ss_pred CChhheeeecCCCCcceEecccccccccCCC---------------------------------c---------------
Confidence 999999997 4456899999988542111 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+-||+|.|||++....|+.++|+|||||++|-
T Consensus 219 -------------------------------------------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYI 255 (400)
T KOG0604|consen 219 -------------------------------------------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255 (400)
T ss_pred -------------------------------------------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHH
Confidence 0011455999999999988889999999999999999
Q ss_pred hhCCCCCC---hh--hHHHH-Hhhccc--CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFCPFSTG---EE--KTRTM-SSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~pf~~~---~~--~~~~~-~~~~~~--~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+|+++ .. ....| ..++.+ .+|..-+... .+..++|+.+|..+|.+|.|+++++.|||++....
T Consensus 256 lLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 256 LLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred hhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 99954443 22 11122 223322 3444434443 44459999999999999999999999999997643
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=289.02 Aligned_cols=202 Identities=20% Similarity=0.246 Sum_probs=162.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcC-c
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG-I 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~g-I 103 (712)
+|..+|..++|||||++++ +|..... .+++++|| .+|+|.++|.+ ..+.++...++.|+.||+.|++|||+++ |
T Consensus 88 ~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i 164 (362)
T KOG0192|consen 88 REASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI 164 (362)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 4555888899999999777 7754433 68888888 69999999965 4667999999999999999999999999 9
Q ss_pred eeccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||||+|||++..+ ++||+|||+++......
T Consensus 165 IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------------------------------------- 198 (362)
T KOG0192|consen 165 IHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------------------------------------- 198 (362)
T ss_pred eecccChhhEEEcCCCCEEEECCCccceeecccc----------------------------------------------
Confidence 9999999999999997 99999999985421110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--CCCCCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDIwSlGv 260 (712)
...+...||+.|||||++. ...|+.++||||||+
T Consensus 199 --------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgI 234 (362)
T KOG0192|consen 199 --------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGI 234 (362)
T ss_pred --------------------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHH
Confidence 0001146899999999999 558999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+||||+| ||........+.........|.......+....++.+||..||..||++.+|+.
T Consensus 235 vlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 235 VLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999 888777633344444455555444445666679999999999999999988866
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-32 Score=288.09 Aligned_cols=207 Identities=20% Similarity=0.256 Sum_probs=166.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+.++. .|+ ...++++|.||+-|+|..+|...+ .++++.++.|..|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfE---t~~~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFE---TSAHLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhc---ccceEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 4455788899999999777 553 446899999998779999995544 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+||.|||+...|.+|++|||+++..+....
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~------------------------------------------------- 155 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNTS------------------------------------------------- 155 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCce-------------------------------------------------
Confidence 9999999999999999999999854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
-.+...|||.|||||.+.+.+|+..+|+|||||++|||+
T Consensus 156 -----------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 156 -----------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred -----------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 011257999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
. ||....-..-....+.....|+. ...+....|+..+|.+||.+|.|+.+++.|||++....
T Consensus 195 ~G~PPF~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 66654443333333333333332 45566779999999999999999999999999887543
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-32 Score=264.66 Aligned_cols=205 Identities=17% Similarity=0.160 Sum_probs=159.1
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++.-+|.+ .+||+|+.+.+ +|+.+ .-+++|+++ ..|.|.++|... -.+++.+.+.|++||++||.|||.++||
T Consensus 71 ~Ev~ILRqv~GHP~II~l~D-~yes~---sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~IV 145 (411)
T KOG0599|consen 71 QEISILRQVMGHPYIIDLQD-VYESD---AFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARNIV 145 (411)
T ss_pred HHHHHHHHhcCCCcEEEeee-eccCc---chhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 44456766 79999999888 77433 235666666 589999999544 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.+.+++|.|||++......+
T Consensus 146 HRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------------------------------------ 177 (411)
T KOG0599|consen 146 HRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------------------------------------ 177 (411)
T ss_pred hcccChhheeeccccceEEeccceeeccCCch------------------------------------------------
Confidence 99999999999999999999999985432211
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC------CCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~sDIwSl 258 (712)
+....+|||.|.|||.+.- ..|+..+|+|++
T Consensus 178 -------------------------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~ 214 (411)
T KOG0599|consen 178 -------------------------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWAC 214 (411)
T ss_pred -------------------------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHH
Confidence 1123689999999998842 238999999999
Q ss_pred HHHHHHhhCCCCCChh--hHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 259 GVLLFELFCPFSTGEE--KTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|-||.+.+++-. .......+..+.+ .+++.+......+||.+||+.||.+|.|++|+|+||||..
T Consensus 215 GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 215 GVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 9999999984333322 2222333334333 3555566666779999999999999999999999999954
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=283.46 Aligned_cols=211 Identities=18% Similarity=0.230 Sum_probs=164.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+.-||+.-+||+||++|+.+| .....+++++.|+||-....+-.-++.|++.++..+++|+++||.|||+++||||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy---~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHR 154 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYY---FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHR 154 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHh---ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 4556799999999999999555 3344556666666888887776667779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||+..+|.|+++|||++...... +
T Consensus 155 DLKAGNiL~TldGdirLADFGVSAKn~~t-----------------------------~--------------------- 184 (1187)
T KOG0579|consen 155 DLKAGNILLTLDGDIRLADFGVSAKNKST-----------------------------R--------------------- 184 (1187)
T ss_pred hccccceEEEecCcEeeecccccccchhH-----------------------------H---------------------
Confidence 99999999999999999999987321000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-----cCCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-----AGAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~sDIwSlGvl 261 (712)
.+.-.++|||+|||||++ ...+|++++||||||++
T Consensus 185 ----------------------------------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT 224 (1187)
T KOG0579|consen 185 ----------------------------------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT 224 (1187)
T ss_pred ----------------------------------------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence 011226899999999987 45679999999999999
Q ss_pred HHHhhC--CCCCChhhHHHHHhhcccCCCchh-hhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC--PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~--pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.||.- |-...-+..+++..+.+...|..+ +..|.. ..+|+.+||..||..||++.++|+||||+....
T Consensus 225 LIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 225 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999998 444444555555555554444322 223443 449999999999999999999999999997654
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=279.27 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=160.5
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+|.. .+|.+|+.||+ | +.....+|++|||+..+|..+|++.....+...++.|..|++.||.++|..||||.|||
T Consensus 412 lL~KLkg~~~IIqL~D--Y--Ev~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLK 487 (677)
T KOG0596|consen 412 LLNKLKGHDKIIQLYD--Y--EVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLK 487 (677)
T ss_pred HHHHhcCCceEEEEee--e--eccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCC
Confidence 4544 58999999998 6 55677899999999999999998777666666999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|.|||+- .|.+||||||++..+..+.
T Consensus 488 PANFLlV-kG~LKLIDFGIA~aI~~DT----------------------------------------------------- 513 (677)
T KOG0596|consen 488 PANFLLV-KGRLKLIDFGIANAIQPDT----------------------------------------------------- 513 (677)
T ss_pred cccEEEE-eeeEEeeeechhcccCccc-----------------------------------------------------
Confidence 9999994 6899999999985443220
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----------CCCCccchHHH
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----------PVSCASDIYRL 258 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~sDIwSl 258 (712)
++| -.-..+||..|||||.+... .++.+||||||
T Consensus 514 -----TsI------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSL 558 (677)
T KOG0596|consen 514 -----TSI------------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSL 558 (677)
T ss_pred -----cce------------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhh
Confidence 000 01126899999999998432 26789999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC--chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF--PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||+||+|+. ||....+...-+..+........++... .++.++++.||..||.+|||+.++|+|||++...-+
T Consensus 559 GCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~ 636 (677)
T KOG0596|consen 559 GCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIP 636 (677)
T ss_pred hhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccccc
Confidence 999999998 6665554444444444332111222211 125599999999999999999999999999985543
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=275.01 Aligned_cols=231 Identities=17% Similarity=0.180 Sum_probs=166.6
Q ss_pred ccccccccCCCCCcc-----eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCC
Q 005147 8 GERFGVRGDDSNDFE-----LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVD 80 (712)
Q Consensus 8 ~~~~~~~~~~~~~~~-----~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~ 80 (712)
++.++|+..+-.++. +|+| ...++..+||||+..++ .| .....++++|.+ .+|++.++++.. ...++
T Consensus 51 ~e~VAIK~inLEkc~~~ld~l~kE--~~~msl~~HPNIv~~~~-sF---vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~ 124 (516)
T KOG0582|consen 51 NEVVAIKIINLEKCNNDLDALRKE--VQTMSLIDHPNIVTYHC-SF---VVDSELWVVMPFMAGGSLLDIIKTYYPDGLE 124 (516)
T ss_pred CCEEEEEEeehhhhhhhHHHHHHH--HHHhhhcCCCCcceEEE-EE---EecceeEEeehhhcCCcHHHHHHHHcccccc
Confidence 455555554433321 2444 34688899999999776 33 334567777777 699999998432 22399
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
+..+..|++++++||+|||.+|.||||||+.||||+.+|.|||.|||.....-..
T Consensus 125 E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~------------------------- 179 (516)
T KOG0582|consen 125 EASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS------------------------- 179 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc-------------------------
Confidence 9999999999999999999999999999999999999999999999976321000
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
|.. +. .+-...+||++|||
T Consensus 180 ---------------------------------------------------G~R--------~~--~rf~tfvgtp~wmA 198 (516)
T KOG0582|consen 180 ---------------------------------------------------GDR--------QV--TRFNTFVGTPCWMA 198 (516)
T ss_pred ---------------------------------------------------Cce--------ee--EeeccccCcccccC
Confidence 000 00 00012689999999
Q ss_pred cccccCC--CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCch-------hhhcC-chhHHHHHHcCC
Q 005147 241 PEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-------LLLKF-PKEASFCLWLLH 307 (712)
Q Consensus 241 PE~~~~~--~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~li~~~L~ 307 (712)
||++... .|++++||||||++..||.+ ||.........+..+....+.+. -...+ .....++..||+
T Consensus 199 PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 199 PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence 9996443 49999999999999999998 77655554455555554432111 11111 223389999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcC
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||.+|||+.++|+|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999997754
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=281.08 Aligned_cols=212 Identities=16% Similarity=0.210 Sum_probs=158.4
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..++..+++.++||||+++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 125 (303)
T cd07869 50 AIREASLLKGLKHANIVLLHD-IIHT---KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYIL 125 (303)
T ss_pred HHHHHHHHhhCCCCCcCeEEE-EEec---CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 335666889999999999887 4432 346889999988899998866555689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+|++|||++........
T Consensus 126 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 158 (303)
T cd07869 126 HRDLKPQNLLISDTGELKLADFGLARAKSVPSH----------------------------------------------- 158 (303)
T ss_pred cCCCCHHHEEECCCCCEEECCCCcceeccCCCc-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 195 (303)
T cd07869 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFV 195 (303)
T ss_pred -------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHH
Confidence 00013578999999998764 4899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc---c--------------C--------CCchhhh------cCchhHHHHHHcCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH---R--------------V--------LPPQLLL------KFPKEASFCLWLLHPE 309 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~---~--------------~--------~~~~~~~------~~~~~~~li~~~L~~d 309 (712)
+|++ ||............+.. . . .+..+.. ..+...+|+.+||+.|
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 275 (303)
T cd07869 196 EMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF 275 (303)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC
Confidence 9999 56543222221111100 0 0 0000000 1134558999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++|||+.++|+||||+....
T Consensus 276 p~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 276 PKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred chhccCHHHHhcCcccccCCh
Confidence 999999999999999998654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=278.36 Aligned_cols=202 Identities=18% Similarity=0.231 Sum_probs=150.7
Q ss_pred eccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++... .....+++++|+.+++|.+++.. ....+++.+++.++.||+.||+|||++||+||||
T Consensus 58 l~~~~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl 136 (290)
T cd07862 58 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 136 (290)
T ss_pred hcccCCCCcceEEE-EEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 44568999999887 44321 23346889999988899999943 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++++|||++.......
T Consensus 137 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 164 (290)
T cd07862 137 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 164 (290)
T ss_pred CHHHEEEcCCCCEEEccccceEeccCCc----------------------------------------------------
Confidence 9999999999999999999874321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 165 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 205 (290)
T cd07862 165 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 205 (290)
T ss_pred ---------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence 0001457999999999988889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCC--------------------c----hh-hhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLP--------------------P----QL-LLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~--------------------~----~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||............+.....+ . .. ....+...+|+.+||+.||++|||+.++|
T Consensus 206 ~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 206 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 454433322221111110000 0 00 11123345899999999999999999999
Q ss_pred cCcCC
Q 005147 321 QSEFL 325 (712)
Q Consensus 321 ~hp~~ 325 (712)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=280.55 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=163.4
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|.++. ||||+.+++ +|++.. .++++||+ .||.|.+.|... . +++.++..+++||+.+|.|||+.||+
T Consensus 84 ~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvv 157 (382)
T KOG0032|consen 84 REVAILQQLSGHPNIVQLKD-AFEDPD---SVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVV 157 (382)
T ss_pred HHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 6667899988 999999888 775443 67888888 599999999444 3 99999999999999999999999999
Q ss_pred eccCCCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 105 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 105 HrDLkP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||||||+|||+... +.+|++|||++...+...
T Consensus 158 HrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~-------------------------------------------- 193 (382)
T KOG0032|consen 158 HRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE-------------------------------------------- 193 (382)
T ss_pred eccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc--------------------------------------------
Confidence 99999999999733 479999999985432210
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
.....+||+.|+|||++.+.+|+..+||||+||
T Consensus 194 -----------------------------------------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gv 226 (382)
T KOG0032|consen 194 -----------------------------------------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGV 226 (382)
T ss_pred -----------------------------------------------eEeeecCCccccCchhhcCCCCCcccchhHHHH
Confidence 001268999999999999999999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccC--C-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRV--L-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++|.|++ ||.......... .+.... + .+.+...+..+.+||..||..||..|+|+.++|+|||++...
T Consensus 227 i~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 227 ILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred HHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 9999999 665554433333 333332 2 233444455566999999999999999999999999999763
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=277.15 Aligned_cols=205 Identities=16% Similarity=0.199 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||+|||++||+||
T Consensus 52 ~E~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (288)
T cd07871 52 REVSLLKNLKHANIVTLHD-IIH---TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHR 127 (288)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEc---CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4566788999999999887 442 234678899998789999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++.......
T Consensus 128 dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~------------------------------------------------- 158 (288)
T cd07871 128 DLKPQNLLINEKGELKLADFGLARAKSVPTK------------------------------------------------- 158 (288)
T ss_pred CCCHHHEEECCCCCEEECcCcceeeccCCCc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l 197 (288)
T cd07871 159 -----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 197 (288)
T ss_pred -----------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHH
Confidence 0001357899999999876 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--cc------------------CCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HR------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~------------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||.............. .. .+|.. .....++..+||.+||++||.+||
T Consensus 198 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~ 277 (288)
T cd07871 198 ATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRI 277 (288)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCC
Confidence 99 5544332211111100 00 00000 011223455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|++|+|+||||
T Consensus 278 t~~~~l~hp~f 288 (288)
T cd07871 278 SAEAALRHSYF 288 (288)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=283.80 Aligned_cols=214 Identities=14% Similarity=0.172 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++... .....+++++|+++++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 48 ~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 48 REIKLLRLLRHPDIVEIKH-IMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHHHHHhCCCCCEeeecc-eEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788999999999887 44222 2223578999999899999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 159 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT---------------------------------------------- 159 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll 262 (712)
.......+|+++|+|||++.+ ..++.++|||||||++
T Consensus 160 -----------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 160 -----------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred -----------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 000011468999999999866 5689999999999999
Q ss_pred HHhhC---CCCCChhhHH--HHH------------------------hhcccCCCch----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTR--TMS------------------------SLRHRVLPPQ----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~--~~~------------------------~~~~~~~~~~----~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||........ .+. .+.. ..+.. +....+...+++.+||..+
T Consensus 199 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~ 277 (338)
T cd07859 199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRK-KQPVPFSQKFPNADPLALRLLERLLAFD 277 (338)
T ss_pred HHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcc-cCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence 99999 4543321110 000 0000 01111 1122344569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++|||+.++|+||||+....
T Consensus 278 P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 278 PKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred cccCCCHHHHhcCchhhhcCc
Confidence 999999999999999987654
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=288.59 Aligned_cols=225 Identities=20% Similarity=0.265 Sum_probs=167.8
Q ss_pred cccccccccCCCCCcceeee-ccceeeccCC-C-----CCcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCC
Q 005147 7 RGERFGVRGDDSNDFELRKH-SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRS 78 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~-~~~~~l~~~~-H-----~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~ 78 (712)
.++.++++=.......+|.. .+..+|.+++ | -|+|++++-+ ....|+|||+|+.+.+|.++|+.+ -..
T Consensus 210 T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F----~fr~HlciVfELL~~NLYellK~n~f~G 285 (586)
T KOG0667|consen 210 TGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF----YFRNHLCIVFELLSTNLYELLKNNKFRG 285 (586)
T ss_pred CCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc----ccccceeeeehhhhhhHHHHHHhcCCCC
Confidence 44555555544444455443 5666677766 3 3678887733 345699999999999999999543 345
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC--CcEEEEecccccCCCCCCcccccccccccccCCCCCCC
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (712)
++...++.++.||+.||.+||+.||||+||||+||||... ..||+||||++...+..
T Consensus 286 lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~--------------------- 344 (586)
T KOG0667|consen 286 LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR--------------------- 344 (586)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc---------------------
Confidence 8999999999999999999999999999999999999843 47999999988432111
Q ss_pred chhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCc
Q 005147 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (712)
Q Consensus 157 ~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (712)
+| .++.+.
T Consensus 345 -----------------------------------vy-------------------------------------tYiQSR 352 (586)
T KOG0667|consen 345 -----------------------------------VY-------------------------------------TYIQSR 352 (586)
T ss_pred -----------------------------------ce-------------------------------------eeeecc
Confidence 11 167799
Q ss_pred cccCcccccCCCCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc--C--------------------------
Q 005147 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--V-------------------------- 286 (712)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~--~-------------------------- 286 (712)
.|+|||++.|.+|+.+.|||||||+++||++ |+++++.....+..+.+- .
T Consensus 353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~ 432 (586)
T KOG0667|consen 353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC 432 (586)
T ss_pred ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence 9999999999999999999999999999999 777765554544333210 0
Q ss_pred --------------------------CCch---hhh-----cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 287 --------------------------LPPQ---LLL-----KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 287 --------------------------~~~~---~~~-----~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.|+. +.. ......+|+.+||.+||.+|+|+.++|+||||+..
T Consensus 433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 0100 000 00112489999999999999999999999999965
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=276.39 Aligned_cols=203 Identities=15% Similarity=0.130 Sum_probs=157.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 124 (291)
T cd05612 50 NEKRVLKEVSHPFIIRLFW-TEH---DQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVY 124 (291)
T ss_pred HHHHHHHhCCCCcHhhhHh-hhc---cCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 3556788999999999887 442 23466777776 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++......
T Consensus 125 ~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 154 (291)
T cd05612 125 RDLKPENILLDKEGHIKLTDFGFAKKLRDR-------------------------------------------------- 154 (291)
T ss_pred cCCCHHHeEECCCCCEEEEecCcchhccCC--------------------------------------------------
Confidence 999999999999999999999987432100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|||||||++|+|
T Consensus 155 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l 191 (291)
T cd05612 155 -------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEM 191 (291)
T ss_pred -------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence 0013579999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+||+ +.++++||||+...
T Consensus 192 ~~g~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 192 LVGYPPFFDDNPF-GIYEKILAGKLE-FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCcC-CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 99 66544332 233333322211 11112345569999999999999995 99999999998643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=285.85 Aligned_cols=211 Identities=17% Similarity=0.150 Sum_probs=156.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.++||||+++++ ++. .....++++++.+++|.+++... +.+++.+++.|+.||+.||+|||++||+||
T Consensus 132 ~E~~il~~l~HpnIv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHr 206 (391)
T PHA03212 132 TEAHILRAINHPSIIQLKG-TFT---YNKFTCLILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHR 206 (391)
T ss_pred HHHHHHHhCCCCCCCCEeE-EEE---ECCeeEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4667899999999999887 442 23467888888888999988544 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++..+.++|+|||++.........
T Consensus 207 DiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~------------------------------------------------ 238 (391)
T PHA03212 207 DIKAENIFINHPGDVCLGDFGAACFPVDINAN------------------------------------------------ 238 (391)
T ss_pred CCChHhEEEcCCCCEEEEeCCccccccccccc------------------------------------------------
Confidence 99999999999999999999987421100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 239 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 277 (391)
T PHA03212 239 -----------------------------------------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA 277 (391)
T ss_pred -----------------------------------------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 001146899999999999888999999999999999999
Q ss_pred C---CCCCChh------hHHHHHhhcc--cC--------------------------CC---c---hhhhcCchhHHHHH
Q 005147 267 C---PFSTGEE------KTRTMSSLRH--RV--------------------------LP---P---QLLLKFPKEASFCL 303 (712)
Q Consensus 267 ~---pf~~~~~------~~~~~~~~~~--~~--------------------------~~---~---~~~~~~~~~~~li~ 303 (712)
+ ||+.... ....+..+.. +. .+ + .......+..+||.
T Consensus 278 tg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~ 357 (391)
T PHA03212 278 TCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLIC 357 (391)
T ss_pred HCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHH
Confidence 8 4432210 0001110000 00 00 0 00011224458999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+||+.||.+|||+.|+|+||||.....+
T Consensus 358 ~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 358 KMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 9999999999999999999999886554
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=276.84 Aligned_cols=210 Identities=16% Similarity=0.166 Sum_probs=150.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC--------CCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|+.++||||+++++ ++.. .....+++++++.+++|.+++... ...+++..++.|++||+.||+||
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 124 (317)
T cd07868 47 REIALLRELKHPNVISLQK-VFLS-HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 124 (317)
T ss_pred HHHHHHHhcCCCCCcceee-eEec-CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 4666789999999999887 4422 234568899999989999987321 22488999999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+|||+ +..+.+|++|||+++........ .
T Consensus 125 H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--- 169 (317)
T cd07868 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 169 (317)
T ss_pred HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c---
Confidence 99999999999999999 45578999999988543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (712)
.......||++|+|||++.+. .++.++
T Consensus 170 ----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 197 (317)
T cd07868 170 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 197 (317)
T ss_pred ----------------------------------------------------cccCCccccccccCCHHHcCCCCcCchh
Confidence 000114679999999999775 489999
Q ss_pred chHHHHHHHHHhhC---CCCCChhh--------HHHHHhhc----------------------------ccCCCc-h---
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLR----------------------------HRVLPP-Q--- 290 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~--------~~~~~~~~----------------------------~~~~~~-~--- 290 (712)
|||||||++|||++ ||....+. ...+..+. ...... .
T Consensus 198 DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T cd07868 198 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 277 (317)
T ss_pred hHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccc
Confidence 99999999999999 45322110 00000000 000000 0
Q ss_pred -----hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 291 -----LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 291 -----~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 278 ~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 278 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=280.26 Aligned_cols=202 Identities=16% Similarity=0.171 Sum_probs=157.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ .+.+ ...+++++|+ .|++|.+++.+.+ .+++..+..++.||+.||+|||++||+|
T Consensus 67 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 141 (329)
T PTZ00263 67 QEKSILMELSHPFIVNMMC-SFQD---ENRVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDIIY 141 (329)
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEc---CCEEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4556788899999999887 4432 3456777776 6899999996543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++......
T Consensus 142 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 171 (329)
T PTZ00263 142 RDLKPENLLLDNKGHVKVTDFGFAKKVPDR-------------------------------------------------- 171 (329)
T ss_pred cCCCHHHEEECCCCCEEEeeccCceEcCCC--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|||||||++|||
T Consensus 172 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 208 (329)
T PTZ00263 172 -------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF 208 (329)
T ss_pred -------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH
Confidence 0014689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||..... ...+..+.....+ ......+...+||.+||+.||.+||+ +++++.||||...
T Consensus 209 ltg~~pf~~~~~-~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 209 IAGYPPFFDDTP-FRIYEKILAGRLK-FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HcCCCCCCCCCH-HHHHHHHhcCCcC-CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99 6654333 2333444333221 11112344569999999999999996 7999999999864
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=278.26 Aligned_cols=208 Identities=18% Similarity=0.199 Sum_probs=168.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.+.|||||.+.+.++++ ...+||+|+| .||+|.+.|+. .+..+++..+..||.||+.||.|||+.+|+
T Consensus 52 ~E~~lis~~~hP~iv~y~ds~~~~---~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iL 128 (426)
T KOG0589|consen 52 QEMDLLSKLLHPNIVEYKDSFEED---GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVL 128 (426)
T ss_pred HHHHHHHhccCCCeeeeccchhcC---CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 455678999999999988855432 2337888888 59999999943 346689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||||+.|||++.++.|++.|||+++..+.+. +|
T Consensus 129 HRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~------------- 162 (426)
T KOG0589|consen 129 HRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL------------- 162 (426)
T ss_pred cccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh-------------
Confidence 99999999999999999999999887654441 01
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
+...+||+.||+||.+.+.+|+.++|||||||++||
T Consensus 163 --------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE 198 (426)
T KOG0589|consen 163 --------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE 198 (426)
T ss_pred --------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence 012689999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ +|...+.. .....+....+.+.......+...++..||..+|..||++.++|.+|.+...
T Consensus 199 m~~lk~aF~a~~m~-~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 199 MCTLKPAFKASNMS-ELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHhcccccCccchH-HHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999 56555444 4444444455555555555666789999999999999999999999766544
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=278.92 Aligned_cols=206 Identities=18% Similarity=0.251 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....+++++|+ .|++|.+++.+. ..+++.++..++.||+.||+|||++||+|
T Consensus 44 ~e~~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH 118 (323)
T cd05571 44 TESRVLQNTRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVY 118 (323)
T ss_pred HHHHHHHhCCCCCCCCEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 4556788899999999877 442 23467777777 689999998544 35899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++......
T Consensus 119 rDlkp~NIll~~~~~~kl~DfG~a~~~~~~~------------------------------------------------- 149 (323)
T cd05571 119 RDLKLENLMLDKDGHIKITDFGLCKEGISDG------------------------------------------------- 149 (323)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcccccCC-------------------------------------------------
Confidence 9999999999999999999999874310000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+|++.|+|||++.+..++.++|||||||++|||
T Consensus 150 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 188 (323)
T cd05571 150 -----------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred -----------------------------------------CcccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence 000014689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+..... .......+...+||.+||..||++|| ++.++++||||....
T Consensus 189 ltg~~Pf~~~~~~-~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 189 MCGRLPFYNQDHE-KLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCC-CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 99 66544332 22222222111 11112345566999999999999999 899999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=292.25 Aligned_cols=201 Identities=27% Similarity=0.429 Sum_probs=158.0
Q ss_pred CceEEEEeeCCccHHHhhcCCCCCC-ChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 55 DPFVHAIEWGDVSLRQWLDKPKRSV-DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 55 ~~~~l~~e~~g~sL~~~l~~~~~~l-~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
..+||.||||..+|..++...+... ...++.++|+||++||.|+|++|||||||||.||++++.++|||+|||++....
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 3578889998766666663333322 578999999999999999999999999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 005147 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (712)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (712)
.. ..... .+. .+++..
T Consensus 749 ~~-------~~~~d---------------------~~~----~~~~~~-------------------------------- 764 (1351)
T KOG1035|consen 749 EN-------LESID---------------------QDL----SFSTNR-------------------------------- 764 (1351)
T ss_pred hh-------hhhHh---------------------hcc----Cccccc--------------------------------
Confidence 00 00000 000 000000
Q ss_pred ccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCch
Q 005147 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQ 290 (712)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~ 290 (712)
....-...+..+||..|+|||++.+.. |+.++|+|||||+||||+.||.+..+.......++.+.+|..
T Consensus 765 --------~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~ 836 (1351)
T KOG1035|consen 765 --------AGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEP 836 (1351)
T ss_pred --------cCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCC
Confidence 000001234479999999999997665 999999999999999999999999999999999999888877
Q ss_pred ---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 291 ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 291 ---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+.+..+..+.+|.+||+.||++||||.|+|++.||-.
T Consensus 837 ~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 837 ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 7777888889999999999999999999999999986
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=280.30 Aligned_cols=202 Identities=15% Similarity=0.127 Sum_probs=158.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++..+..++.||+.||.|||++||+||
T Consensus 81 E~~~l~~l~hp~Iv~~~~-~~~~---~~~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 155 (340)
T PTZ00426 81 ERKILNYINHPFCVNLYG-SFKD---ESYLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIVYR 155 (340)
T ss_pred HHHHHHhCCCCCCcceEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 556788899999999888 4432 3457788887 5899999995544 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++++|||++......
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~~~~~~--------------------------------------------------- 184 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAKVVDTR--------------------------------------------------- 184 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCeecCCC---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 185 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 222 (340)
T PTZ00426 185 ------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL 222 (340)
T ss_pred ------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh
Confidence 00146899999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+...... ......+...+++.+||+.+|.+|+ +++++++||||....
T Consensus 223 ~G~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 223 VGCPPFYANEPL-LIYQKILEGIIY-FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred cCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 9 66544332 333333333211 1111234556999999999999995 899999999998743
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=280.82 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|..++|+||+++++ ++.. ....++++++..++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVS---GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEe---CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3555788999999999888 4432 34567888888889999996666669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++..+.++++|||+++......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999999874211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......||..|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000145799999999999989999999999999999999
Q ss_pred C---CCCCChh-h--------HHHHHh-hcc-cCCCchhh-------------------------------hcCchhHHH
Q 005147 267 C---PFSTGEE-K--------TRTMSS-LRH-RVLPPQLL-------------------------------LKFPKEASF 301 (712)
Q Consensus 267 ~---pf~~~~~-~--------~~~~~~-~~~-~~~~~~~~-------------------------------~~~~~~~~l 301 (712)
+ +++.... . ...+.. +.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 2221100 0 000111 000 01111000 112233479
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|.+||+.||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=269.22 Aligned_cols=201 Identities=21% Similarity=0.296 Sum_probs=149.3
Q ss_pred eccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|.+++||||+++++ ++.... ....+++++|+.+++|.+++.. ....+++.+++.++.||+.||+|||++||+||||
T Consensus 56 l~~~~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 134 (288)
T cd07863 56 LEAFDHPNIVRLMD-VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 134 (288)
T ss_pred hhhcCCCCeeeeee-eeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 45568999999888 443322 2456788899887899999844 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+|++|||++.......
T Consensus 135 kp~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 162 (288)
T cd07863 135 KPENILVTSGGQVKLADFGLARIYSCQM---------------------------------------------------- 162 (288)
T ss_pred CHHHEEECCCCCEEECccCccccccCcc----------------------------------------------------
Confidence 9999999999999999999874321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|+..|+|||++.+..++.++|||||||++|+|++
T Consensus 163 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 203 (288)
T cd07863 163 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 203 (288)
T ss_pred ---------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence 0001357889999999988889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcc------------------cCCCc-------hhhhc-CchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 268 --PFSTGEEKTRTMSSLRH------------------RVLPP-------QLLLK-FPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------~~~~~-------~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
||..... ...+..+.. ..+.+ ..... .....+++.+||++||.+|||+.++
T Consensus 204 ~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~ 282 (288)
T cd07863 204 KPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA 282 (288)
T ss_pred CcCcCCCCH-HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence 3332222 122111111 00000 01111 2234599999999999999999999
Q ss_pred hcCcCC
Q 005147 320 LQSEFL 325 (712)
Q Consensus 320 L~hp~~ 325 (712)
++||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=275.60 Aligned_cols=205 Identities=16% Similarity=0.201 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 42 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 116 (312)
T cd05585 42 AERTVLAQVNCPFIVPLKF-SFQS---PEKLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFNVIY 116 (312)
T ss_pred HHHHHHHhCCCCcEeceee-EEec---CCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 4556788999999999877 4532 3456777776 6999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||+++.......
T Consensus 117 rDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 148 (312)
T cd05585 117 RDLKPENILLDYQGHIALCDFGLCKLNMKDDD------------------------------------------------ 148 (312)
T ss_pred CCCCHHHeEECCCCcEEEEECcccccCccCCC------------------------------------------------
Confidence 99999999999999999999998743110000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 149 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 186 (312)
T cd05585 149 ------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEM 186 (312)
T ss_pred ------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+|+.+||..||.+|| ++.++|+||||...
T Consensus 187 ~tg~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 187 LTGLPPFYDENVN-EMYRKILQEPL-RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HhCCCCcCCCCHH-HHHHHHHcCCC-CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99 66544332 22222222211 11112334556999999999999997 58999999999875
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=287.77 Aligned_cols=213 Identities=15% Similarity=0.191 Sum_probs=154.6
Q ss_pred ccceeeccCCCCCccccccccccccc----ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+|+.++||||+.+++.++.... ....++++||+.+++|.+++. .....+++..++.|+.||+.||+|||
T Consensus 108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 108 RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46668899999999998773332211 122467899998889988773 34456899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
++||+||||||+|||++..+ .+||+|||+++......
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------ 225 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------ 225 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC------------------------------------------
Confidence 99999999999999998665 69999999885321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwS 257 (712)
......|+++|+|||++.+. .|+.++||||
T Consensus 226 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS 256 (440)
T PTZ00036 226 -------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWS 256 (440)
T ss_pred -------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHH
Confidence 00114679999999998765 5999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCC----chh----hh-cCchhHHHHHHcCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLP----PQL----LL-KFPKEASFCLWLLH 307 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~----~~~----~~-~~~~~~~li~~~L~ 307 (712)
|||++|||++ ||............+.. ..+| ..+ +. ..++..+||.+||.
T Consensus 257 lGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~ 336 (440)
T PTZ00036 257 LGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK 336 (440)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC
Confidence 9999999999 45433222111111110 0001 001 11 12345699999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcC
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+|||+.|+|+||||.....
T Consensus 337 ~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 337 YEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CChhHCcCHHHHhCChhHHhhhc
Confidence 99999999999999999987544
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=269.21 Aligned_cols=206 Identities=17% Similarity=0.202 Sum_probs=150.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+++++ ++. ....+++++|+..+++.+.+......+++..++.++.||+.||.|||+.||+||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 124 (287)
T cd07848 49 RELKMLRTLKQENIVELKE-AFR---RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHR 124 (287)
T ss_pred HHHHHHHhCCCccccchhh-hEe---cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4556788899999999887 442 234678888886445555553334458999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.........
T Consensus 125 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------------ 156 (287)
T cd07848 125 DIKPENLLISHNDVLKLCDFGFARNLSEGSNA------------------------------------------------ 156 (287)
T ss_pred CCCHHHEEEcCCCcEEEeeccCcccccccccc------------------------------------------------
Confidence 99999999999999999999988443111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||++.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~ 195 (287)
T cd07848 157 -----------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELS 195 (287)
T ss_pred -----------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHH
Confidence 000145789999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHH--hhccc------------------CCCch---------hh-hcCchhHHHHHHcCCCCCCCC
Q 005147 267 C---PFSTGEEKTRTMS--SLRHR------------------VLPPQ---------LL-LKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~--~~~~~------------------~~~~~---------~~-~~~~~~~~li~~~L~~dP~~R 313 (712)
+ ||........... ..... ..+.. .. ...+...+||.+||+.||++|
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R 275 (287)
T cd07848 196 DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDR 275 (287)
T ss_pred hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence 9 5554332211111 10000 00000 00 012335599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
||++++|+||||
T Consensus 276 ~s~~~~l~hp~f 287 (287)
T cd07848 276 YLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=246.98 Aligned_cols=204 Identities=17% Similarity=0.212 Sum_probs=164.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
|+..+-+++.||||+++|+ .+.++ ...|++.|| .+|+|...|. .+...+++..+..+++|++.||.|||.++||
T Consensus 71 REiEIqs~L~hpnilrlY~-~fhd~---~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VI 146 (281)
T KOG0580|consen 71 REIEIQSHLRHPNILRLYG-YFHDS---KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVI 146 (281)
T ss_pred heeEeecccCCccHHhhhh-heecc---ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcc
Confidence 5666889999999999998 55443 356777777 6889998884 3445599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+|++..|.+|++|||.+-....
T Consensus 147 hRdiKpenlLlg~~~~lkiAdfGwsV~~p~-------------------------------------------------- 176 (281)
T KOG0580|consen 147 HRDIKPENLLLGSAGELKIADFGWSVHAPS-------------------------------------------------- 176 (281)
T ss_pred cCCCCHHHhccCCCCCeeccCCCceeecCC--------------------------------------------------
Confidence 999999999999999999999998721100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. +....+||.-|.+||.+.+..++..+|+|++|++.||
T Consensus 177 -----------------------------------~-------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~ye 214 (281)
T KOG0580|consen 177 -----------------------------------N-------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYE 214 (281)
T ss_pred -----------------------------------C-------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHH
Confidence 0 1122789999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++. ||.+.. ....++.+++..+.-. ......+.++|.+||..+|.+|.+..|++.|||+...
T Consensus 215 flvg~ppFes~~-~~etYkrI~k~~~~~p-~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 215 FLVGLPPFESQS-HSETYKRIRKVDLKFP-STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHhcCCchhhhh-hHHHHHHHHHccccCC-cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 998 666555 4556666665432211 2334556699999999999999999999999998753
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=277.72 Aligned_cols=208 Identities=16% Similarity=0.224 Sum_probs=156.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++.... ....+++++++.|++|.++++. ..+++.+++.++.||+.||+|||++||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i 139 (343)
T cd07878 63 RELRLLKHMKHENVIGLLD-VFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHhcCCCchhhhhh-hhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4667899999999999887 443222 2246789999999999998853 348999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||++......
T Consensus 140 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07878 140 IHRDLKPSNVAVNEDCELRILDFGLARQADDE------------------------------------------------ 171 (343)
T ss_pred ecccCChhhEEECCCCCEEEcCCccceecCCC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....|+++|+|||++.+ ..++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 206 (343)
T cd07878 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence 001467999999999877 4589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---cC----------------------CCch-----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---RV----------------------LPPQ-----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---~~----------------------~~~~-----~~~~~~~~~~li~~~L~~d 309 (712)
|+|++ ||...... ..+..+.. .. .+.. +....+...+|+.+||..|
T Consensus 207 ~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 285 (343)
T cd07878 207 AELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCC
Confidence 99998 55433221 11111110 00 0000 0112234459999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|||+.++|+||||.....+
T Consensus 286 p~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 286 SDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCcchhccCCC
Confidence 9999999999999999876543
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-30 Score=270.10 Aligned_cols=208 Identities=13% Similarity=0.147 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++.+++ .+.. ...+++++++ .+++|.+++.. ....+++..++.++.||+.||+|||++||+
T Consensus 49 ~E~~il~~l~~~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05631 49 NEKRILEKVNSRFVVSLAY-AYET---KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124 (285)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEcc---CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4566888999999999877 4432 2356677766 68999988743 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05631 125 YRDLKPENILLDDRGHIRISDLGLAVQIPEGE------------------------------------------------ 156 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~e 193 (285)
T cd05631 157 -------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHH
Confidence 0001468999999999999899999999999999999
Q ss_pred hhC---CCCCChhhH---HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
|++ ||....... .....+... .........+...+|+.+||..||.+||+ ++++++||||.....
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 194 MIQGQSPFRKRKERVKREEVDRRVKED-QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred HHhCCCCCCCCCcchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 998 665433211 111111111 11111122345569999999999999997 899999999988643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-30 Score=286.24 Aligned_cols=197 Identities=15% Similarity=0.229 Sum_probs=142.5
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIl 114 (712)
+|.+++.+++ ++. ....++|+++++.|++|.+++.+.+ .+++.+++.|+.||+.||+|||+ .|||||||||+|||
T Consensus 189 ~~~~i~~i~~-~~~--~~~~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 189 DRFPLMKIQR-YFQ--NETGHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENIL 264 (467)
T ss_pred cCcceeeeEE-EEE--cCCceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence 3455666665 442 2345789999999999999995543 49999999999999999999998 59999999999999
Q ss_pred ecCCC----------------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 115 MSSFN----------------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 115 l~~~~----------------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
++..+ .+||+|||.+.....
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-------------------------------------------- 300 (467)
T PTZ00284 265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-------------------------------------------- 300 (467)
T ss_pred EecCCcccccccccccCCCCceEEECCCCccccCcc--------------------------------------------
Confidence 98665 366666665421100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.....+||+.|+|||++.+..|+.++|||||
T Consensus 301 -------------------------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 331 (467)
T PTZ00284 301 -------------------------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSM 331 (467)
T ss_pred -------------------------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHH
Confidence 0011578999999999999999999999999
Q ss_pred HHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhh---------------------------------------hc
Q 005147 259 GVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL---------------------------------------LK 294 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~---------------------------------------~~ 294 (712)
||++|||++ ||........ .+.... +.+|..+. ..
T Consensus 332 Gvil~elltG~~pf~~~~~~~~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (467)
T PTZ00284 332 GCIIYELYTGKLLYDTHDNLEHLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIR 410 (467)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhc
Confidence 999999999 5544332111 111110 00110000 01
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+...+||.+||++||.+|||+.|+|+||||.....
T Consensus 411 ~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 411 DDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred hHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 123448999999999999999999999999987543
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-30 Score=276.63 Aligned_cols=208 Identities=20% Similarity=0.229 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.... ....+++++|+.+++|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 72 ~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~i 147 (364)
T cd07875 72 RELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 147 (364)
T ss_pred HHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 4566788899999999887 443322 2246789999988899998843 37889999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++..+...
T Consensus 148 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~----------------------------------------------- 180 (364)
T cd07875 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 180 (364)
T ss_pred ecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-----------------------------------------------
Confidence 999999999999999999999999884321110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 216 (364)
T cd07875 181 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216 (364)
T ss_pred --------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHH
Confidence 000145789999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC---------------------C------------ch--------hhhcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL---------------------P------------PQ--------LLLKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~---------------------~------------~~--------~~~~~~~~~ 299 (712)
+|++ ||....... .+..+..... | .. .........
T Consensus 217 ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
T cd07875 217 EMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295 (364)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHH
Confidence 9998 665443221 1111111000 0 00 000112345
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.++|+||||.....
T Consensus 296 dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 296 DLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 8999999999999999999999999976433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-31 Score=273.12 Aligned_cols=207 Identities=18% Similarity=0.240 Sum_probs=161.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..+|++.+++||...|+ .|.. ...+.++||| .||++.+.|+.. ..+++.++.-|+++++.||.|||+++.+|
T Consensus 60 qei~~Ls~~~~~~it~yyg-syl~---g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiH 134 (467)
T KOG0201|consen 60 QEISVLSQCDSPNITEYYG-SYLK---GTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIH 134 (467)
T ss_pred HHHHHHHhcCcchHHhhhh-heee---cccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceec
Confidence 4677899999999999777 4422 2344555555 699999988544 44699999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||+.||++...|.||++|||++.......
T Consensus 135 rDIKaanil~s~~g~vkl~DfgVa~ql~~~~------------------------------------------------- 165 (467)
T KOG0201|consen 135 RDIKAANILLSESGDVKLADFGVAGQLTNTV------------------------------------------------- 165 (467)
T ss_pred ccccccceeEeccCcEEEEecceeeeeechh-------------------------------------------------
Confidence 9999999999999999999999883221100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+....+|||.|||||++.+..|+.++||||||++.+||
T Consensus 166 -----------------------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl 204 (467)
T KOG0201|consen 166 -----------------------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL 204 (467)
T ss_pred -----------------------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHH
Confidence 011226899999999999988899999999999999999
Q ss_pred hCCCCCC--hhhHHHHHhhcccCCCchhhhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FCPFSTG--EEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+++-++. .....++..+ ....||.+...+.. ..+|+..||..+|+.||+|.++|+|+|++...
T Consensus 205 a~GePP~s~~hPmrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 205 AKGEPPHSKLHPMRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hcCCCCCcccCcceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 9933332 2222222223 33455555555554 66999999999999999999999999999843
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-30 Score=273.19 Aligned_cols=206 Identities=18% Similarity=0.248 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+.+++ .+. ....+++++|| .|++|.+++.... .+++..++.++.||+.||+|||++||+|
T Consensus 44 ~E~~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (323)
T cd05595 44 TESRVLQNTRHPFLTALKY-AFQ---THDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVY 118 (323)
T ss_pred HHHHHHHhCCCCCCcceee-EEe---cCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3456788899999999877 442 23467778877 6899999885443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||++........
T Consensus 119 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------ 150 (323)
T cd05595 119 RDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------------ 150 (323)
T ss_pred cCCCHHHEEEcCCCCEEecccHHhccccCCCC------------------------------------------------
Confidence 99999999999999999999998743111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 151 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 188 (323)
T cd05595 151 ------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred ------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence 00014689999999999988999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||....... ....+..... .......+...++|.+||..||.+|| ++.++++||||....
T Consensus 189 l~g~~Pf~~~~~~~-~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 189 MCGRLPFYNQDHER-LFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred HhCCCCCCCCCHHH-HHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 98 665443332 2222221111 11112345566999999999999998 899999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=275.64 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+.+++ ++.... ....+++++|+.+++|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 69 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 69 RELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred HHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4566788999999999888 443322 2235789999988889887732 37899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++|+|||+++......
T Consensus 145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 177 (359)
T cd07876 145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNF----------------------------------------------- 177 (359)
T ss_pred ccCCCCHHHEEECCCCCEEEecCCCccccccCc-----------------------------------------------
Confidence 999999999999999999999999874321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 178 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 213 (359)
T cd07876 178 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 213 (359)
T ss_pred --------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHH
Confidence 000146789999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc------------------------cCCCch-h----------------hhcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH------------------------RVLPPQ-L----------------LLKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~------------------------~~~~~~-~----------------~~~~~~~~ 299 (712)
+|++ ||....... ....+.. ...+.. + ....+...
T Consensus 214 el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
T cd07876 214 ELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQAR 292 (359)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHH
Confidence 9998 565432211 1110000 000000 0 00123445
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||++|||+.|+|+||||.....
T Consensus 293 ~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 293 DLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 9999999999999999999999999985433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-30 Score=277.70 Aligned_cols=207 Identities=19% Similarity=0.214 Sum_probs=172.4
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-- 101 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-- 101 (712)
-.++..+|+.+.||||+++|+.+. +..+ ..+.+++|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 88 ~~~Ev~lLKsL~H~NIirfy~SW~-d~~n-~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~~P 164 (632)
T KOG0584|consen 88 LYSEVHLLKSLKHPNIIRFYDSWV-DTDN-KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQDP 164 (632)
T ss_pred HHHHHHHHccCCCCceeeeeehee-cCCC-ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcCCC
Confidence 345667899999999999998444 3333 456666666 69999999966554 99999999999999999999998
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
-|||||||.+||||+ .-|.|||.|+|++......
T Consensus 165 PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--------------------------------------------- 199 (632)
T KOG0584|consen 165 PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--------------------------------------------- 199 (632)
T ss_pred CccccccccceEEEcCCcCceeecchhHHHHhhcc---------------------------------------------
Confidence 699999999999998 5699999888877332111
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
...+.+|||.|||||++. ..|+..+||||||.
T Consensus 200 -----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGM 231 (632)
T KOG0584|consen 200 -----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGM 231 (632)
T ss_pred -----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhH
Confidence 011258999999999986 66999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++.||+| ||.--.+.+..++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|+||||...
T Consensus 232 CmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 232 CMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 9999999 88877888899999999998877655 356777999999999 8999999999999999986
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-30 Score=274.77 Aligned_cols=202 Identities=17% Similarity=0.240 Sum_probs=156.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+.+++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+||
T Consensus 51 e~~~l~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 125 (333)
T cd05600 51 ERDILTTTKSEWLVKLLY-AFQ---DDEYLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYIHR 125 (333)
T ss_pred HHHHHHhCCCCCCccEEE-EEE---cCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445688889999999887 443 23457777777 5999999995443 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++......
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~--------------------------------------------------- 154 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVTY--------------------------------------------------- 154 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCcccccc---------------------------------------------------
Confidence 99999999999999999999988432100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....|++.|+|||++.+..++.++|||||||++|||+
T Consensus 155 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 192 (333)
T cd05600 155 ------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFL 192 (333)
T ss_pred ------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhh
Confidence 00146899999999999989999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc---CCCchh----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHR---VLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+ ||..... ...+..+... ...+.. ....+...+|+.+||..+|.+||++.++++||||...
T Consensus 193 ~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 193 CGFPPFSGSTP-NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hCCCCCCCCCH-HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 8 6644332 2222222211 111111 1224556699999999999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-30 Score=254.62 Aligned_cols=238 Identities=16% Similarity=0.222 Sum_probs=171.2
Q ss_pred cccccccccccCCCCCccee--eeccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCC
Q 005147 5 LLRGERFGVRGDDSNDFELR--KHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r--~~~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~ 80 (712)
+..|...+|+=.+.+...-| -.|+...+.+ .+|+||+.++. +|+++ ..||+|+|- .||.|...|.+... ++
T Consensus 100 i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLie-fFEdd---~~FYLVfEKm~GGplLshI~~~~~-F~ 174 (463)
T KOG0607|consen 100 IQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIE-FFEDD---TRFYLVFEKMRGGPLLSHIQKRKH-FN 174 (463)
T ss_pred eccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHH-Hhccc---ceEEEEEecccCchHHHHHHHhhh-cc
Confidence 45677777776666644433 3355555544 89999999998 77654 357888776 69999998855544 99
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
+.++..+++.|+.||+|||.+||.||||||+|||-...++ |||+||.+.+.+...
T Consensus 175 E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------- 232 (463)
T KOG0607|consen 175 EREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------- 232 (463)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC----------------------
Confidence 9999999999999999999999999999999999986665 799999876321100
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
.|..++.++ .....+|+..
T Consensus 233 -----------~~~spastP--------------------------------------------------~L~tPvGSAE 251 (463)
T KOG0607|consen 233 -----------NDCSPASTP--------------------------------------------------ELLTPVGSAE 251 (463)
T ss_pred -----------CCCCCCCCc--------------------------------------------------cccCcccchh
Confidence 111111000 1123689999
Q ss_pred ccCccccc---CC--CCCCccchHHHHHHHHHhhCCCCCCh------------h-----hHHHHHhhccc--CCCchhhh
Q 005147 238 YASPEELA---GA--PVSCASDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLL 293 (712)
Q Consensus 238 Y~aPE~~~---~~--~~~~~sDIwSlGvll~eLl~pf~~~~------------~-----~~~~~~~~~~~--~~~~~~~~ 293 (712)
|||||++- +. .|+.++|.|||||+||-||++|.++. + ....+..+..+ .+|...+.
T Consensus 252 fMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa 331 (463)
T KOG0607|consen 252 FMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA 331 (463)
T ss_pred hcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhH
Confidence 99999872 22 38999999999999999999544321 1 11222333333 34555444
Q ss_pred cCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 294 KFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 294 ~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
..+ ...+++..+|..++.+|.++.++++|||++....
T Consensus 332 hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 332 HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred HhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 444 4459999999999999999999999999997644
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-30 Score=277.78 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=155.2
Q ss_pred CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
.||-++.+++ .+ ....++|.+||| .||++..|+.. +.+++..++.|+..|+.||+|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~f---QT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CF---QTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-cc---ccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 7999999888 33 455678888888 68886665532 34999999999999999999999999999999999999
Q ss_pred ecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccc
Q 005147 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (712)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~ 194 (712)
|+..|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~-----------------------------------------------------g~---- 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ-----------------------------------------------------GD---- 523 (694)
T ss_pred EcccCcEEecccccccccCCC-----------------------------------------------------CC----
Confidence 999999999999999541000 00
Q ss_pred cccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCC
Q 005147 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (712)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~ 271 (712)
+....+|||.|||||++.+..|+.++|+|+|||||||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 0112789999999999999999999999999999999998 8876
Q ss_pred ChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
.++....-+.+......|.+ ...+..++++++|..+|++|.. +.+|.+||||+...-
T Consensus 571 ddEee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 66553333333333322222 2234558999999999999984 689999999998754
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=271.85 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+.+++ .+. ....++++||| .+++|.+++... ..+++.+++.++.||+.||+|||++||+|
T Consensus 44 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (328)
T cd05593 44 TESRVLKNTRHPFLTSLKY-SFQ---TKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVY 118 (328)
T ss_pred HHHHHHHhCCCCCCcceEE-EEE---cCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 3456788999999999877 442 23467777777 689999988544 35899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||+++......
T Consensus 119 rDikp~NIll~~~~~~kL~DfG~~~~~~~~~------------------------------------------------- 149 (328)
T cd05593 119 RDLKLENLMLDKDGHIKITDFGLCKEGITDA------------------------------------------------- 149 (328)
T ss_pred cccCHHHeEECCCCcEEEecCcCCccCCCcc-------------------------------------------------
Confidence 9999999999999999999999874211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 150 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 188 (328)
T cd05593 150 -----------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (328)
T ss_pred -----------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence 000014689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+||.+||..||.+|| ++.++++||||...
T Consensus 189 ltG~~Pf~~~~~~-~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 189 MCGRLPFYNQDHE-KLFELILMEDI-KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred hhCCCCCCCCCHH-HHHHHhccCCc-cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99 66543322 22222222111 11112334566999999999999997 89999999999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=281.37 Aligned_cols=209 Identities=16% Similarity=0.189 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|+.++|+||+++++ ++. .....++++++..++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 209 ~E~~iL~~L~HpnIv~l~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 284 (461)
T PHA03211 209 HEARLLRRLSHPAVLALLD-VRV---VGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR 284 (461)
T ss_pred HHHHHHHHCCCCCCCcEEE-EEE---ECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence 4556788899999999887 442 234567777777789999986555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.++.++|+|||+++........
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------------ 316 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWST------------------------------------------------ 316 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceeccccccc------------------------------------------------
Confidence 99999999999999999999987432100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+ ......||..|+|||++.+..++.++|||||||+||||+
T Consensus 317 ---------------------------------------~-~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 317 ---------------------------------------P-FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred ---------------------------------------c-cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH
Confidence 0 000146899999999999989999999999999999998
Q ss_pred C---CCCCChh-------hHHHHHhhccc-----CCCc----------------------------hhhhcCchhHHHHH
Q 005147 267 C---PFSTGEE-------KTRTMSSLRHR-----VLPP----------------------------QLLLKFPKEASFCL 303 (712)
Q Consensus 267 ~---pf~~~~~-------~~~~~~~~~~~-----~~~~----------------------------~~~~~~~~~~~li~ 303 (712)
+ +++.... .......+... .++. .+....+...+||.
T Consensus 357 ~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 436 (461)
T PHA03211 357 VHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVC 436 (461)
T ss_pred HcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHH
Confidence 6 2322110 01111111110 0110 00011234558999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+||+.||.+|||+.|+|+||||+.
T Consensus 437 ~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 437 RALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHcccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999999975
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-30 Score=275.75 Aligned_cols=233 Identities=16% Similarity=0.224 Sum_probs=161.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+.+++ ++. ....+++++|+ .|++|.+++.+. ..+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 51 ERDILADADSPWIVKLYY-SFQ---DEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred HHHHHHhcCCCCccchhh-hee---cCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 445788899999999887 443 23457777777 599999999555 459999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||++.............. ..+.... ......
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~-------------------------~~~~~~~-----~~~~~~ 175 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLN-------------------------DSHNLLF-----RDNVLV 175 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCccccccc-------------------------ccccccc-----cccccc
Confidence 9999999999999999999999865433210000000 0000000 000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........+.......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 176 -------------------------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 176 -------------------------------RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred -------------------------------cccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc
Confidence 0000000001112257899999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~~ 328 (712)
+ ||....... ....+.. ....+......+...+||.+||. +|.+||+ +.++|+||||...
T Consensus 225 ~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 225 YGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred cCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 9 665544332 2222222 11111122234556699999997 9999999 9999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-30 Score=277.17 Aligned_cols=225 Identities=19% Similarity=0.214 Sum_probs=167.5
Q ss_pred ccccccCCCCCcceee--eccceeeccCCCCCcccccccccccccccCceEEEE-eeCCccHHHhhcCCCCCC--ChhHH
Q 005147 10 RFGVRGDDSNDFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAI-EWGDVSLRQWLDKPKRSV--DVYEC 84 (712)
Q Consensus 10 ~~~~~~~~~~~~~~r~--~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~-e~~g~sL~~~l~~~~~~l--~~~~~ 84 (712)
|++++-..-.++.+-. ..+..+=+++.|+|||+.++. + ..+. .+-|.| +++||+|..+|+..-+++ ++..+
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-~--senG-f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm 677 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-V--SENG-FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTM 677 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-c--CCCC-eEEEEeecCCCCcHHHHHHhccCCCccchhHH
Confidence 3444444444444411 244555677999999998883 3 2222 444544 458999999997766667 88899
Q ss_pred HHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
-.+.+||++||.|||.+.|||||||.+|+|++ .+|.+||.|||.++....-
T Consensus 678 ~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi---------------------------- 729 (1226)
T KOG4279|consen 678 NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI---------------------------- 729 (1226)
T ss_pred HHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC----------------------------
Confidence 99999999999999999999999999999998 7899999999988543110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
.|++.+ ..||..|||||+
T Consensus 730 -------------------------------------------------------------nP~TET-FTGTLQYMAPEv 747 (1226)
T KOG4279|consen 730 -------------------------------------------------------------NPCTET-FTGTLQYMAPEV 747 (1226)
T ss_pred -------------------------------------------------------------Cccccc-cccchhhhChHh
Confidence 111111 568999999999
Q ss_pred ccCCC--CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH
Q 005147 244 LAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (712)
Q Consensus 244 ~~~~~--~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (712)
+-.++ |+.++|||||||++.||.| ||..-.....+|-.+.- ..-|+.......+...||.+|+.++|..||++.
T Consensus 748 IDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 748 IDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred hccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHH
Confidence 97665 9999999999999999999 66544444455554432 233333333334455999999999999999999
Q ss_pred HHhcCcCCCCC
Q 005147 318 ELLQSEFLNEP 328 (712)
Q Consensus 318 eiL~hp~~~~~ 328 (712)
++|+.||++..
T Consensus 828 ~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 828 DLLQDPFLQHN 838 (1226)
T ss_pred HhccCcccccC
Confidence 99999999876
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=270.64 Aligned_cols=205 Identities=19% Similarity=0.248 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+.+++ ++.. ...+++++|+ .|++|.+++.+.+ .+++..+..++.||+.||+|||++||+|
T Consensus 49 ~E~~il~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (323)
T cd05584 49 AERNILEAVKHPFIVDLIY-AFQT---GGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGIIY 123 (323)
T ss_pred HHHHHHHhCCCCchhceee-EEec---CCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3455788999999999887 4432 2356777776 6899999995544 4889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++.......
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 155 (323)
T cd05584 124 RDLKPENILLDAQGHVKLTDFGLCKESIHEGT------------------------------------------------ 155 (323)
T ss_pred CCCCHHHeEECCCCCEEEeeCcCCeecccCCC------------------------------------------------
Confidence 99999999999999999999998743210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 156 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 193 (323)
T cd05584 156 ------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDM 193 (323)
T ss_pred ------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHH
Confidence 00014689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+.....+ ......+...+||.+||..+|++|| ++.++++||||...
T Consensus 194 l~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 194 LTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 99 56543332 333333332211 1112235566999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=274.52 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+.+++ ++.... ....+++++|+.+++|.+++.. .++...+..++.||+.||+|||++||
T Consensus 65 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~gi 140 (355)
T cd07874 65 RELVLMKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 140 (355)
T ss_pred HHHHHHHHhCCCchhceee-eeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4666788899999999888 443222 2235789999988889888843 37899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++..+...
T Consensus 141 vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 173 (355)
T cd07874 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 173 (355)
T ss_pred ccCCCChHHEEECCCCCEEEeeCcccccCCCcc-----------------------------------------------
Confidence 999999999999999999999999884322110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+..++.++|||||||++|
T Consensus 174 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (355)
T cd07874 174 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209 (355)
T ss_pred --------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 000146799999999999888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc---------------------c-------CCCchhh-----------h-cCchhHH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH---------------------R-------VLPPQLL-----------L-KFPKEAS 300 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~---------------------~-------~~~~~~~-----------~-~~~~~~~ 300 (712)
+|++ ||............+.. . ..+.... . ......+
T Consensus 210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd07874 210 EMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289 (355)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHH
Confidence 9998 56543321111100000 0 0000000 0 1123458
Q ss_pred HHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 301 FCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 301 li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.+||..||++|||+.|+|+||||.....
T Consensus 290 li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 290 LLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=269.19 Aligned_cols=210 Identities=17% Similarity=0.193 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|+.++||||+.+++ ++. ......+++++++.+++|.+++.. ....+++..++.++.||+.||.||
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~-~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 47 REIALLRELKHPNVIALQK-VFL-SHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEe-ccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 4666888999999999888 332 233456789999988899888732 122478899999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+||++ +..+.+||+|||+++..+..... .
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--- 169 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 169 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c---
Confidence 99999999999999999 45678999999998543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (712)
.......|++.|+|||.+.+. .++.++
T Consensus 170 ----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 197 (317)
T cd07867 170 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 197 (317)
T ss_pred ----------------------------------------------------cccCcceecccccCcHHhcCCCccCcHH
Confidence 000114679999999999774 489999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhH---------HH--H------------Hhhc-------------ccCCC-chh--
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKT---------RT--M------------SSLR-------------HRVLP-PQL-- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~---------~~--~------------~~~~-------------~~~~~-~~~-- 291 (712)
|||||||++|||++ ||....+.. .. + ..+. ..... ...
T Consensus 198 DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T cd07867 198 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIK 277 (317)
T ss_pred HHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhh
Confidence 99999999999999 443221100 00 0 0000 00000 000
Q ss_pred ------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 292 ------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 292 ------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
........+|+.+||..||.+|||+.|+|+||||
T Consensus 278 ~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 278 YMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234479999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=277.27 Aligned_cols=211 Identities=15% Similarity=0.161 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.++||||+++++ ++. ....+|+++++.+++|.+++.. ...+++.+++.|+.||+.||.|||++||+||
T Consensus 135 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHr 209 (392)
T PHA03207 135 REIDILKTISHRAIINLIH-AYR---WKSTVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHR 209 (392)
T ss_pred HHHHHHHhcCCCCccceee-eEe---eCCEEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 4666899999999999887 443 2346888999988899999943 3459999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++..+.++|+|||++.........
T Consensus 210 Dlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~------------------------------------------------ 241 (392)
T PHA03207 210 DVKTENIFLDEPENAVLGDFGAACKLDAHPDT------------------------------------------------ 241 (392)
T ss_pred CCCHHHEEEcCCCCEEEccCccccccCccccc------------------------------------------------
Confidence 99999999999999999999988433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 242 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 281 (392)
T PHA03207 242 ----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMS 281 (392)
T ss_pred ----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 0001146899999999999888999999999999999999
Q ss_pred C---CCCCChhh--HHHHHhhc--------------------------ccCCC----chhh---hcCchhHHHHHHcCCC
Q 005147 267 C---PFSTGEEK--TRTMSSLR--------------------------HRVLP----PQLL---LKFPKEASFCLWLLHP 308 (712)
Q Consensus 267 ~---pf~~~~~~--~~~~~~~~--------------------------~~~~~----~~~~---~~~~~~~~li~~~L~~ 308 (712)
+ ||...... ...+..+. ....+ +... ....+..+||.+||..
T Consensus 282 ~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~ 361 (392)
T PHA03207 282 VKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTF 361 (392)
T ss_pred HCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhcc
Confidence 8 66543211 01111100 00000 0000 0112344899999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.+|||+.++|.||||.....
T Consensus 362 dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 362 DQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ChhhCCCHHHHhhCchhhccch
Confidence 9999999999999999986543
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=269.10 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=151.5
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+||||+.+++ ++. ....++++||| .|++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||+||
T Consensus 53 ~~h~~iv~~~~-~~~---~~~~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NI 127 (320)
T cd05590 53 RNHPFLTQLYC-CFQ---TPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNV 127 (320)
T ss_pred cCCCchhceee-EEE---cCCEEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHe
Confidence 47999999887 442 23456777777 6899999985543 489999999999999999999999999999999999
Q ss_pred eecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
+++.++.++++|||++.......
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~--------------------------------------------------------- 150 (320)
T cd05590 128 LLDHEGHCKLADFGMCKEGIFNG--------------------------------------------------------- 150 (320)
T ss_pred EECCCCcEEEeeCCCCeecCcCC---------------------------------------------------------
Confidence 99999999999999874311000
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCC
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
.......|++.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 151 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (320)
T cd05590 151 ---------------------------------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE 197 (320)
T ss_pred ---------------------------------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 00011468999999999998889999999999999999998 665
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 328 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~ 328 (712)
..... .....+...... ......+...+|+.+||+.||.+||++ +++++||||...
T Consensus 198 ~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 198 AENED-DLFEAILNDEVV-YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 44433 333333332211 111223455699999999999999998 999999999865
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=270.57 Aligned_cols=205 Identities=19% Similarity=0.186 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++..+..++.||+.||.|||++ +|+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~iv 126 (331)
T cd06649 52 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIM 126 (331)
T ss_pred HHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 4555788999999999888 4432 2356677776 6899999995543 489999999999999999999986 699
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 127 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 158 (331)
T cd06649 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------------------------------------------ 158 (331)
T ss_pred cCCCChhhEEEcCCCcEEEccCcccccccccc------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||.+.+..++.++|||||||++||
T Consensus 159 --------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e 194 (331)
T cd06649 159 --------------------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (331)
T ss_pred --------------------------------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHH
Confidence 001457999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc----------------------------------------------ccCCCchhh-hc
Q 005147 265 LFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL-LK 294 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~-~~ 294 (712)
|++ ||...... .....+. ....+.... ..
T Consensus 195 l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T cd06649 195 LAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 273 (331)
T ss_pred HHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccc
Confidence 998 66433221 1111110 000111111 12
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.++..+||.+||..||++|||+.++|+||||+...
T Consensus 274 ~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 274 TPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 34556999999999999999999999999998654
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=274.18 Aligned_cols=239 Identities=18% Similarity=0.267 Sum_probs=157.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+++++ .+.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+||
T Consensus 51 E~~il~~~~~~~iv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~givHr 125 (363)
T cd05628 51 ERDILVEADSLWVVKMFY-SFQD---KLNLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFIHR 125 (363)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 445788899999999887 4432 3457777777 5899999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||+++.......... .+ ......+ .++.+......
T Consensus 126 DlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~-~~------~~~~~~~------------~~~~~~~~~~~------- 179 (363)
T cd05628 126 DIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF-YR------NLNHSLP------------SDFTFQNMNSK------- 179 (363)
T ss_pred CCCHHHeEECCCCCEEEeeccCcccccccccccc-cc------ccccccc------------ccccccccccc-------
Confidence 9999999999999999999999865432110000 00 0000000 01100000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...+.............+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 180 -----------------------------~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell 230 (363)
T cd05628 180 -----------------------------RKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (363)
T ss_pred -----------------------------cccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHH
Confidence 000000000000011257999999999999989999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCC---CCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~---~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+... .+|+. ....+...++|.+|+. +|. .||+++||++||||+...
T Consensus 231 ~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 231 IGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred hCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 9 66544332 333333321 12221 2234556688888764 444 568999999999999763
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=283.33 Aligned_cols=209 Identities=20% Similarity=0.247 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|+.++||||+++++ .+.. ...++++||| .|++|.++|.. ....+++.++..++.||+.||+|||++|
T Consensus 114 ~E~~~l~~l~Hpniv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 189 (478)
T PTZ00267 114 SELHCLAACDHFGIVKHFD-DFKS---DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK 189 (478)
T ss_pred HHHHHHHhCCCCCEeEEEE-EEEE---CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4566789999999999888 4422 3467788887 59999988732 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|||++.++.+||+|||+++........ +
T Consensus 190 ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~------------ 226 (478)
T PTZ00267 190 MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D------------ 226 (478)
T ss_pred EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c------------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 227 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 261 (478)
T PTZ00267 227 ---------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGVIL 261 (478)
T ss_pred ---------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||..... ...+..+.....++......+...++|.+||..+|++||++.+++.|+|++..
T Consensus 262 ~el~tg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 262 YELLTLHRPFKGPSQ-REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHhCCCCCCCCCH-HHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 99999 6654333 23344433333333223334566799999999999999999999999988653
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=274.26 Aligned_cols=212 Identities=18% Similarity=0.252 Sum_probs=157.3
Q ss_pred eccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|..++|+||+.+++ ++.... ....+++++|+.+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 47 ~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i 124 (372)
T cd07853 47 FRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGI 124 (372)
T ss_pred HHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35666788999999999888 443332 123678999998889999885543 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||++.........
T Consensus 125 vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~--------------------------------------------- 159 (372)
T cd07853 125 LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK--------------------------------------------- 159 (372)
T ss_pred eCCCCChHHEEECCCCCEEeccccceeecccCccc---------------------------------------------
Confidence 99999999999999999999999987432111000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
......++++|+|||.+.+.. ++.++|||||||++
T Consensus 160 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 195 (372)
T cd07853 160 --------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF 195 (372)
T ss_pred --------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHH
Confidence 000135789999999998754 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhh------------------------cccCCCchh-------hhcCchhHHHHHHcCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSL------------------------RHRVLPPQL-------LLKFPKEASFCLWLLHP 308 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~------------------------~~~~~~~~~-------~~~~~~~~~li~~~L~~ 308 (712)
|||++ ||....... ....+ .....++.. ....+...+||.+||..
T Consensus 196 ~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 274 (372)
T cd07853 196 AELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVF 274 (372)
T ss_pred HHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCC
Confidence 99998 554432211 11110 011111111 11233455999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCc
Q 005147 309 EPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
||.+|||+.++|+||||....
T Consensus 275 dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 275 DPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred ChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999998754
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=280.18 Aligned_cols=215 Identities=19% Similarity=0.247 Sum_probs=161.3
Q ss_pred ccceeeccCCCCCccccccccccccc----ccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++...|..++|+|+++++..+..... ....+++++|| .+++|.++|.. ....+++.++..|+.||+.||+||
T Consensus 80 ~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l 159 (496)
T PTZ00283 80 AEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV 159 (496)
T ss_pred HHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45556788999999987663322111 11135677777 68999999843 234589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+|||++.++.+||+|||+++.+...... +
T Consensus 160 H~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~-------- 200 (496)
T PTZ00283 160 HSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D-------- 200 (496)
T ss_pred HhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c--------
Confidence 9999999999999999999999999999998543211000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......||+.|+|||++.+..++.++|||||
T Consensus 201 -------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSl 231 (496)
T PTZ00283 201 -------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKADMFSL 231 (496)
T ss_pred -------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHHHHHH
Confidence 0011468999999999999899999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|||++ ||...... ..+........++......+...+++.+||+.+|.+||++.++++|||++....
T Consensus 232 GvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~ 305 (496)
T PTZ00283 232 GVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305 (496)
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence 999999999 66544332 333333333333333334456669999999999999999999999999876543
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=270.95 Aligned_cols=207 Identities=18% Similarity=0.216 Sum_probs=152.9
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|.++ +||||+.+++ ++. ....+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+
T Consensus 53 ~e~~~l~~l~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 53 TERNVLEHVRQSPFLVTLHY-AFQ---TEAKLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred HHHHHHHhccCCCCcccEEE-EEe---cCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 344567777 5899999776 442 23456777777 5899999995443 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.++|+|||++.........
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~---------------------------------------------- 161 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE---------------------------------------------- 161 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCccccccCCC----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+.. ++.++|||||||++|
T Consensus 162 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 198 (332)
T cd05614 162 -------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIF 198 (332)
T ss_pred -------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhh
Confidence 001146899999999998754 889999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
||++ ||.... ........+... .++......+...+++.+||..||++|| +++++++||||+..
T Consensus 199 elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 199 ELLTGASPFTLEGERNTQSEVSRRILKC-DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhcCCCCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 554221 111122222211 1121122334556999999999999999 78899999999874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-30 Score=250.36 Aligned_cols=217 Identities=19% Similarity=0.231 Sum_probs=163.2
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc----CCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~----~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
-+.||..++..+.|||++.+...+.. ....++++++|...+|.+.|+ ...+.++...++.|+.||++||.|||
T Consensus 73 SAcREiaL~REl~h~nvi~Lv~Vfl~---~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH 149 (438)
T KOG0666|consen 73 SACREIALLRELKHPNVISLVKVFLS---HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH 149 (438)
T ss_pred HHHHHHHHHHHhcCCcchhHHHHHhc---cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh
Confidence 34588889999999999998884432 256788999999999999882 23456899999999999999999999
Q ss_pred hcCceeccCCCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
++=|+||||||+|||+..+ |.|||+|+|+++.+..+-.
T Consensus 150 ~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plk-------------------------------------- 191 (438)
T KOG0666|consen 150 SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLK-------------------------------------- 191 (438)
T ss_pred hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccc--------------------------------------
Confidence 9999999999999999866 8999999999976533200
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCC-CCCcc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAP-VSCAS 253 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-~~~~s 253 (712)
|+ .....+-|.||+|||.+.|.. ||.+.
T Consensus 192 --------------------------------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~Ai 221 (438)
T KOG0666|consen 192 --------------------------------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAI 221 (438)
T ss_pred --------------------------------------------------ccccCCceEEEEEecChHHhcccccccchh
Confidence 00 001146799999999999987 99999
Q ss_pred chHHHHHHHHHhhC--CCCCCh-hh------------HHHHHhh------------------------cccCCCch-h--
Q 005147 254 DIYRLGVLLFELFC--PFSTGE-EK------------TRTMSSL------------------------RHRVLPPQ-L-- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~--pf~~~~-~~------------~~~~~~~------------------------~~~~~~~~-~-- 291 (712)
|||++||++.||++ |.+... +. .+.+..+ +...+.+. +
T Consensus 222 DvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~ 301 (438)
T KOG0666|consen 222 DVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHK 301 (438)
T ss_pred hhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHH
Confidence 99999999999999 544321 11 1111111 10111110 0
Q ss_pred -----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 292 -----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 292 -----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
....+...+|+.+||.+||-+|+|++++|+|+||.....+
T Consensus 302 ~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 302 YYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0122335589999999999999999999999999987544
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=269.18 Aligned_cols=201 Identities=18% Similarity=0.213 Sum_probs=153.8
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ .+. ....+++++|+ .|++|.+++... ..+++..++.++.||+.||+|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQ---TADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEE---eCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 467799999999877 442 23456777776 689999999554 348999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+|||++.++.+||+|||++.......
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 150 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS----------------------------------------------------- 150 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC-----------------------------------------------------
Confidence 999999999999999999874210000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 151 -------------------------------------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred -------------------------------------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 00011468999999999999899999999999999999999
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... ..+..+...... ......+...++|.+||+.+|.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66544332 333333322211 111234455699999999999999987 699999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-30 Score=269.18 Aligned_cols=207 Identities=16% Similarity=0.152 Sum_probs=166.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|.++.|||.+..-+ +|. .....++|||||-|+-.++|.-...++.+.++..|+.+.+.||.|||+.+.|||
T Consensus 75 KEVrFL~~l~HPntieYkg-CyL---re~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHR 150 (948)
T KOG0577|consen 75 KEVRFLRQLRHPNTIEYKG-CYL---REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHR 150 (948)
T ss_pred HHHHHHHhccCCCcccccc-eee---ccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 4556799999999999444 663 334568899999888888885555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||++..|.||++|||++....+
T Consensus 151 DiKAGNILLse~g~VKLaDFGSAsi~~P---------------------------------------------------- 178 (948)
T KOG0577|consen 151 DIKAGNILLSEPGLVKLADFGSASIMAP---------------------------------------------------- 178 (948)
T ss_pred hccccceEecCCCeeeeccccchhhcCc----------------------------------------------------
Confidence 9999999999999999999998843211
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
...++|||+|||||++. .+.|+-++||||||++..
T Consensus 179 ------------------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCI 216 (948)
T KOG0577|consen 179 ------------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 216 (948)
T ss_pred ------------------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhh
Confidence 12278999999999985 455999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.- |++..+.....+. +.....|....+.|.+.. .|+..||+.-|.+|||.+++|.|+|+...+.+.
T Consensus 217 ELAERkPPlFnMNAMSALYH-IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~t 288 (948)
T KOG0577|consen 217 ELAERKPPLFNMNAMSALYH-IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPT 288 (948)
T ss_pred hhhhcCCCccCchHHHHHHH-HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCch
Confidence 9998 7776655444433 333334443345565554 999999999999999999999999998876643
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=266.14 Aligned_cols=209 Identities=14% Similarity=0.190 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+.+++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||+|||++||+||
T Consensus 53 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~ 128 (309)
T cd07872 53 REVSLLKDLKHANIVTLHD-IVH---TDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHR 128 (309)
T ss_pred HHHHHHHhCCCCCcceEEE-EEe---eCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4556788899999999888 443 235688999998889999986655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 129 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 159 (309)
T cd07872 129 DLKPQNLLINERGELKLADFGLARAKSVPTK------------------------------------------------- 159 (309)
T ss_pred CCCHHHEEECCCCCEEECccccceecCCCcc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+. .++.++|||||||++|+|
T Consensus 160 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (309)
T cd07872 160 -----------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 198 (309)
T ss_pred -----------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 00013568899999998654 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--c------------------cCCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--H------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~------------------~~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||.............. . ..++.. .....+...+||.+||..||.+||
T Consensus 199 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 278 (309)
T cd07872 199 ASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI 278 (309)
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCC
Confidence 99 5544322111111100 0 000100 011223445999999999999999
Q ss_pred CHHHHhcCcCCCCCc
Q 005147 315 KMGELLQSEFLNEPR 329 (712)
Q Consensus 315 t~~eiL~hp~~~~~~ 329 (712)
|+.|+|+||||+...
T Consensus 279 t~~e~l~h~~~~~~~ 293 (309)
T cd07872 279 SAEEAMKHAYFRSLG 293 (309)
T ss_pred CHHHHhcChhhhhcc
Confidence 999999999999764
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=274.59 Aligned_cols=244 Identities=15% Similarity=0.200 Sum_probs=160.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~ivH 124 (364)
T cd05599 50 AERDILAEADNPWVVKLYY-SFQ---DENYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYIH 124 (364)
T ss_pred HHHHHHHhCCCCCCcceEE-EEE---cCCeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3556788899999999887 443 23467777777 5999999995544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++++|||++.............. .. ...+.+. .++.....
T Consensus 125 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--~~-----~~~~~~~---------~~~~~~~~--------- 179 (364)
T cd05599 125 RDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI--LS-----HALPSNF---------LDFISKPM--------- 179 (364)
T ss_pred ccCCHHHeEECCCCCEEEeecccceecccccccccccc--cc-----ccccccc---------cccccccc---------
Confidence 99999999999999999999999865422210000000 00 0000000 00000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ...................+||+.|+|||++.+..++.++|||||||++|||
T Consensus 180 --------~-------------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 180 --------S-------------------SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred --------c-------------------ccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 0 0000000000000001125799999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||+...
T Consensus 233 ~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 233 LVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 99 56544332 222222221111 1111234556699999996 9999997 99999999998753
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=270.30 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=151.3
Q ss_pred ceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 29 GVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 29 ~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
..++..+ +||||+++++ ++.. ...+++++|+ .|++|.+++.+. +.+++..++.|+.||+.||+|||++||+||
T Consensus 46 ~~il~~~~~hp~Iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 46 KHVFETASNHPFLVGLHS-CFQT---ESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred HHHHHhccCCCCCCceEE-EEEc---CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 3345454 8999999887 5432 2456777776 689999988544 359999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..-... +
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------------------------~---------------- 151 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------------------------D---------------- 151 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------------------------C----------------
Confidence 999999999999999999999874210000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||++.+..++.++|||||||++|+|+
T Consensus 152 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~ 190 (329)
T cd05588 152 -----------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 190 (329)
T ss_pred -----------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHH
Confidence 001146899999999999989999999999999999999
Q ss_pred C---CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCC
Q 005147 267 C---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~ 328 (712)
+ ||... .........+..... .......+...+++.+||..||.+||| +.++++||||...
T Consensus 191 ~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 191 AGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HCCCCcccccccccccccchHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 8 55311 011112222222211 111122345569999999999999987 7899999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=274.77 Aligned_cols=254 Identities=15% Similarity=0.224 Sum_probs=159.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+++++ .+.+ ...+++++|+ .|++|.+++.+.. .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~givH 124 (381)
T cd05626 50 AERDILAEADNEWVVKLYY-SFQD---KDNLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMGFIH 124 (381)
T ss_pred HHHHHHHhcCCCCeeeeEE-EEec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 4555788999999999888 4432 3457777777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++++|||++..+............. . .......+..+. .+. +.
T Consensus 125 rDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~--------~~~------------~~ 182 (381)
T cd05626 125 RDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-H-IRQDSMEPSDLW--------DDV------------SN 182 (381)
T ss_pred cCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-c-ccccccCccccc--------ccc------------cc
Confidence 9999999999999999999999986432211000000000 0 000000000000 000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
|. .+. ...+.. .... ...........+||+.|+|||.+.+..++.++|||||||++|||
T Consensus 183 ~~-----~~~-----------~~~~~~--~~~~---~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 183 CR-----CGD-----------RLKTLE--QRAT---KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred cc-----ccc-----------ccchhh--cccc---ccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 00 000 000000 0000 00000001225799999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--ccCCCchhhhcCchhHHHHHHcC--CCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L--~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++ ||............+. .....+......++..+||.+|+ ..+|..||++.++++||||...
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99 6655443322222221 11111222233466679998855 4556669999999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=267.09 Aligned_cols=200 Identities=19% Similarity=0.235 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++.-++..+.|+|||++++ +|..+ .+++|++|| ..|+|.+||+. .+..++..+.+.++.||++|++||.++++|
T Consensus 250 ~Ea~iMk~L~H~~lV~l~g-V~~~~---~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~I 325 (468)
T KOG0197|consen 250 REAQIMKKLRHEKLVKLYG-VCTKQ---EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYI 325 (468)
T ss_pred HHHHHHHhCcccCeEEEEE-EEecC---CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5566899999999999888 66432 378888888 59999999975 566789999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||...|||++.++.+||+|||+++..+.++..
T Consensus 326 HRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~---------------------------------------------- 359 (468)
T KOG0197|consen 326 HRDLAARNILVDEDLVVKISDFGLARLIGDDEYT---------------------------------------------- 359 (468)
T ss_pred chhhhhhheeeccCceEEEcccccccccCCCcee----------------------------------------------
Confidence 9999999999999999999999999754433211
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+ ..-|.|||.+..+.++.+||||||||+|||
T Consensus 360 ----------------------------------~~~~~kf---------PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E 396 (468)
T KOG0197|consen 360 ----------------------------------ASEGGKF---------PIKWTAPEALNYGKFSSKSDVWSFGVLLWE 396 (468)
T ss_pred ----------------------------------ecCCCCC---------CceecCHHHHhhCCcccccceeehhhhHHH
Confidence 0001112 234789999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
|+| ||.. ....++...+..+..-+......+...+++..||+.+|++|||++.+.
T Consensus 397 ~fT~G~~py~~-msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 397 LFTYGRVPYPG-MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HhccCCCCCCC-CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 999 5554 444567777777766666666666667999999999999999998543
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-29 Score=275.65 Aligned_cols=253 Identities=15% Similarity=0.190 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~~~h~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~ivH 124 (382)
T cd05625 50 AERDILAEADNEWVVRLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGFIH 124 (382)
T ss_pred HHHHHHHhCCCCcCCeEEE-EEE---eCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3455788999999999888 443 23467888887 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++..+............... +-...+|... +.......
T Consensus 125 rDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~ 184 (382)
T cd05625 125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV-----------------RQDSMDFSNE---WGDPANCR 184 (382)
T ss_pred CCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccc-----------------cccccccccc---cccccccc
Confidence 999999999999999999999998643211000000000000 0000011000 00000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
|. .... ....... ...........+||+.|+|||++.+..++.++|||||||++|||
T Consensus 185 ~~-------~~~~---------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 185 CG-------DRLK---------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cc-------cccc---------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 00 0000 0000000 00000011225799999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc--CCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~ 328 (712)
++ ||.........+..+... ...+......+...++|.+|+ .+|.+|++ +.++++||||...
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99 666544433333322211 111222234556668998876 59999997 9999999999874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=273.28 Aligned_cols=205 Identities=16% Similarity=0.193 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++++++||||+.+++ ++. ....+++++|+ .|++|.+++... .+++..+..++.||+.||+|||++||+||
T Consensus 93 e~~il~~~~h~~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 166 (370)
T cd05596 93 ERDIMAHANSEWIVQLHY-AFQ---DDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHR 166 (370)
T ss_pred HHHHHHhCCCCCcceEEE-EEe---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 455788999999999887 443 23457777777 599999998543 38899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||++.........
T Consensus 167 DLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~------------------------------------------------ 198 (370)
T cd05596 167 DVKPDNMLLDKSGHLKLADFGTCMKMDANGMV------------------------------------------------ 198 (370)
T ss_pred CCCHHHEEEcCCCCEEEEeccceeeccCCCcc------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC----CCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDIwSlGvll 262 (712)
.....+|++.|+|||++.+. .++.++|||||||++
T Consensus 199 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvil 237 (370)
T cd05596 199 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 237 (370)
T ss_pred -----------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHH
Confidence 00114689999999998653 378999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... ..+..+...... +..........+||.+||..+|.+ |+|+.++++||||+..
T Consensus 238 yelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 238 YEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99999 66544332 333333332211 111123445569999999999987 9999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=271.07 Aligned_cols=206 Identities=18% Similarity=0.255 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
.+..++..++||||+.+++ ++. ....++++||+ .|++|.+++... ..+++.+++.++.||+.||+|||+ +||+
T Consensus 44 ~e~~~l~~~~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~iv 118 (325)
T cd05594 44 TENRVLQNSRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVV 118 (325)
T ss_pred HHHHHHHhCCCCCCCceEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 3445688899999999877 442 23467788887 589999988544 348999999999999999999998 7999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++...... .
T Consensus 119 HrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~-------------- 151 (325)
T cd05594 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A-------------- 151 (325)
T ss_pred ecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c--------------
Confidence 99999999999999999999999874211000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05594 152 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 188 (325)
T ss_pred -------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeee
Confidence 0001468999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||...... ..+..+..... .......+...+|+.+||..||++|+ ++.++++||||....
T Consensus 189 l~tG~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 189 MMCGRLPFYNQDHE-KLFELILMEEI-RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred eccCCCCCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 999 66543322 22222222111 11112345566999999999999997 899999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=267.80 Aligned_cols=204 Identities=18% Similarity=0.232 Sum_probs=148.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
.+..+|..+ +||||+.+++ ++. .....++++||| .|++|.++|....
T Consensus 59 ~E~~~l~~l~~h~niv~~~~-~~~--~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (338)
T cd05102 59 SELKILIHIGNHLNVVNLLG-ACT--KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDR 135 (338)
T ss_pred HHHHHHHHhccCcceeeEEe-Eec--CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcccc
Confidence 344566666 8999999887 443 223456666666 6999999984321
Q ss_pred ---------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEE
Q 005147 77 ---------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSF 123 (712)
Q Consensus 77 ---------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl 123 (712)
..+++.++..++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl 215 (338)
T cd05102 136 RIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI 215 (338)
T ss_pred ccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEE
Confidence 23777889999999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccc
Q 005147 124 IESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGM 203 (712)
Q Consensus 124 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (712)
+|||+++...... .+
T Consensus 216 ~DfG~a~~~~~~~---------------------------------~~-------------------------------- 230 (338)
T cd05102 216 CDFGLARDIYKDP---------------------------------DY-------------------------------- 230 (338)
T ss_pred eecccccccccCc---------------------------------ch--------------------------------
Confidence 9999885421110 00
Q ss_pred ccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHH
Q 005147 204 QEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTM 279 (712)
Q Consensus 204 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~ 279 (712)
.......++..|+|||++.+..++.++|||||||++|||++ ||..........
T Consensus 231 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~ 287 (338)
T cd05102 231 -----------------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFC 287 (338)
T ss_pred -----------------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHH
Confidence 00001235678999999998889999999999999999985 555433222233
Q ss_pred HhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 280 SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 288 QRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 333333322222233445669999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=256.68 Aligned_cols=207 Identities=17% Similarity=0.183 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++... ..+++++|+ .|++|.+++.... .+++..++.++.||+.||.|||+.||+|
T Consensus 53 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H 127 (263)
T cd06625 53 CEIQLLKNLQHERIVQYYG-CLRDD---ETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNMIVH 127 (263)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEccC---CeEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3445788999999999888 44322 366777776 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.++........ ..
T Consensus 128 ~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 162 (263)
T cd06625 128 RDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT-------------- 162 (263)
T ss_pred CCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc--------------
Confidence 999999999999999999999987432111000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 200 (263)
T cd06625 163 ------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200 (263)
T ss_pred ------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHH
Confidence 00013568899999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...+..............+...........+++.+||..+|.+|||+.++++||||
T Consensus 201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 201 LTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99 5544433322222222222222222233455699999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=257.87 Aligned_cols=227 Identities=18% Similarity=0.252 Sum_probs=169.8
Q ss_pred ccccccccccccCCCCCc-------ceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC
Q 005147 4 RLLRGERFGVRGDDSNDF-------ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP 75 (712)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~ 75 (712)
+.+.|+.++|+=.|...- .|.+.| -++...|||||++|. +. .....+|++.|+ .||+|.+||-+.
T Consensus 39 HVFTGekVAVKviDKTKlD~~st~hlfqEVR---CMKLVQHpNiVRLYE-Vi---DTQTKlyLiLELGD~GDl~DyImKH 111 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVR---CMKLVQHPNIVRLYE-VI---DTQTKLYLILELGDGGDLFDYIMKH 111 (864)
T ss_pred hhcccceeEEEEecccccchhhhhHHHHHHH---HHHHhcCcCeeeeee-hh---cccceEEEEEEecCCchHHHHHHhh
Confidence 456777777766554321 122222 356678999999776 43 445578888888 588999999776
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCC
Q 005147 76 KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (712)
Q Consensus 76 ~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (712)
...+.+..+++||+||+.|+.|||...||||||||+|+++- .-|-||+.|||++-.+...+
T Consensus 112 e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~------------------ 173 (864)
T KOG4717|consen 112 EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK------------------ 173 (864)
T ss_pred hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc------------------
Confidence 66699999999999999999999999999999999999876 66999999999873321110
Q ss_pred CCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc
Q 005147 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (712)
Q Consensus 155 ~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (712)
+.+..+|
T Consensus 174 -------------------------------------------------------------------------kL~TsCG 180 (864)
T KOG4717|consen 174 -------------------------------------------------------------------------KLTTSCG 180 (864)
T ss_pred -------------------------------------------------------------------------hhhcccc
Confidence 1122689
Q ss_pred CccccCcccccCCCCC-CccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCC
Q 005147 235 TNWYASPEELAGAPVS-CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 235 t~~Y~aPE~~~~~~~~-~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
...|.|||++.|..|+ +++||||||||||.|+| ||....+ .+.+-.+....+.. ......+..+||..||..||
T Consensus 181 SLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND-SETLTmImDCKYtv-PshvS~eCrdLI~sMLvRdP 258 (864)
T KOG4717|consen 181 SLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND-SETLTMIMDCKYTV-PSHVSKECRDLIQSMLVRDP 258 (864)
T ss_pred hhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc-hhhhhhhhcccccC-chhhhHHHHHHHHHHHhcCc
Confidence 9999999999999986 68999999999999999 6653332 23333333332211 11123455599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+|.+.++|..++|++....
T Consensus 259 kkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 259 KKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hhhccHHHHhccccccCCCC
Confidence 99999999999999997644
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=270.85 Aligned_cols=207 Identities=16% Similarity=0.200 Sum_probs=156.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++...+|+||+.+++ ++.+ ...+++++|+ .|++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~i~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H 125 (330)
T cd05601 50 EERDILSISNSPWIPQLQY-AFQD---KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVH 125 (330)
T ss_pred HHHHHHHhCCCCCCcceee-EEec---CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 3445677889999999877 4432 3457777777 599999999665456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 126 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~----------------------------------------------- 158 (330)
T cd05601 126 RDIKPENVLIDRTGHIKLADFGSAARLTANKMV----------------------------------------------- 158 (330)
T ss_pred ccCchHheEECCCCCEEeccCCCCeECCCCCce-----------------------------------------------
Confidence 999999999999999999999988443211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc------CCCCCCccchHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRLG 259 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSlG 259 (712)
......|++.|+|||++. +..++.++||||||
T Consensus 159 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG 196 (330)
T cd05601 159 ------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLG 196 (330)
T ss_pred ------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeeccc
Confidence 001136899999999986 45588999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|||++ ||...... ..+..+...... +......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 197 ~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 197 VIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99999999 66544332 223333221111 1112234455699999998 99999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=264.94 Aligned_cols=200 Identities=16% Similarity=0.206 Sum_probs=153.0
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.+..++||||+++++ ++. ....+|+++|+ .|++|..++... .+++.+++.++.||+.||.|||++||+|||||
T Consensus 55 ~~~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlk 128 (324)
T cd05589 55 TANSERHPFLVNLFA-CFQ---TEDHVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRDLK 128 (324)
T ss_pred hccccCCCChhceee-EEE---cCCEEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence 356789999999887 443 23467777777 689999888443 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+|++|||+++......
T Consensus 129 p~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------------------------- 155 (324)
T cd05589 129 LDNLLLDTEGFVKIADFGLCKEGMGFG----------------------------------------------------- 155 (324)
T ss_pred HHHeEECCCCcEEeCcccCCccCCCCC-----------------------------------------------------
Confidence 999999999999999999874211000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~ 198 (324)
T cd05589 156 -------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE 198 (324)
T ss_pred -------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCC
Confidence 00011468999999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
||...... .....+..... .......+...++|.+||..||.+|| ++.++++||||...
T Consensus 199 ~pf~~~~~~-~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 199 SPFPGDDEE-EVFDSIVNDEV-RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCCCCCHH-HHHHHHHhCCC-CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 66544332 22222222211 11112234556999999999999999 69999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=268.17 Aligned_cols=202 Identities=18% Similarity=0.262 Sum_probs=149.4
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++.. .+||||+++++ ++.. ...+++++|+ .|++|..++... ..+++..++.|+.||+.||+|||++||+||||
T Consensus 48 ~l~~~~~hp~iv~~~~-~~~~---~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Di 122 (329)
T cd05618 48 VFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDL 122 (329)
T ss_pred HHHhcCCCCcCCceee-EEEe---CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 3443 48999999887 4432 2356667766 689999988544 34999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||+++..-... +
T Consensus 123 kp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~------------------ 151 (329)
T cd05618 123 KLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------------ 151 (329)
T ss_pred CHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C------------------
Confidence 9999999999999999999874210000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (329)
T cd05618 152 ---------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred ---------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCC
Q 005147 268 --PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~ 328 (712)
||... .........+..... .......+...+++.+||..||.+||+ +.++++||||...
T Consensus 193 ~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 193 RSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 55310 001111122222111 111123345569999999999999998 5899999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=261.09 Aligned_cols=205 Identities=17% Similarity=0.226 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|||++++++ ++. ....+++++++.+++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 48 ~ei~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~ 123 (284)
T cd07839 48 REICLLKELKHKNIVRLYD-VLH---SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHR 123 (284)
T ss_pred HHHHHHHhcCCCCeeeHHH-Hhc---cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 3555788899999999888 443 234678899998889999886555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++...+.... .+
T Consensus 124 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~--------------- 156 (284)
T cd07839 124 DLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------CY--------------- 156 (284)
T ss_pred CCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------Cc---------------
Confidence 9999999999999999999998854321100 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
....++..|+|||.+.+.. ++.++|||||||++|+|
T Consensus 157 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 193 (284)
T cd07839 157 -------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193 (284)
T ss_pred -------------------------------------------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHH
Confidence 0134688999999987754 79999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-------------------cCCCc---------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-------------------~~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ |+............+.. ...+. ......+...+|+.+||..||.+||
T Consensus 194 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 273 (284)
T cd07839 194 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI 273 (284)
T ss_pred HhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC
Confidence 97 55443332222211110 00000 0011234455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 274 t~~~il~h~~f 284 (284)
T cd07839 274 SAEEALQHPYF 284 (284)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=265.48 Aligned_cols=199 Identities=18% Similarity=0.267 Sum_probs=152.1
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+.+++ ++. ....++++||+ .|++|.+++.... .+++.++..++.||+.||+|||++||+||||||+|
T Consensus 52 ~~~~~~i~~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N 126 (316)
T cd05620 52 AWENPFLTHLYC-TFQ---TKEHLFFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDN 126 (316)
T ss_pred ccCCCCccCeeE-EEE---eCCEEEEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence 468999999887 442 23467788887 5899999985543 48999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.++++|||+++......
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------------- 150 (316)
T cd05620 127 VMLDRDGHIKIADFGMCKENVFGD-------------------------------------------------------- 150 (316)
T ss_pred eEECCCCCEEeCccCCCeecccCC--------------------------------------------------------
Confidence 999999999999999874210000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
.......|++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf 196 (316)
T cd05620 151 ----------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred ----------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence 00011468999999999999899999999999999999998 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-HHHhcCcCCCCCc
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~eiL~hp~~~~~~ 329 (712)
..... ......+.... +.......++..+++.+||..||.+||++ +++++||||....
T Consensus 197 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 197 HGDDE-DELFESIRVDT-PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCCCH-HHHHHHHHhCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 54433 23333333221 11111233455699999999999999997 5899999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=260.33 Aligned_cols=207 Identities=16% Similarity=0.183 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..++..++|+||+.+++ ++.. ...++++||+ .|++|..++. .....+++.++..++.||+.||+|||++|
T Consensus 42 ~E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 117 (280)
T cd05608 42 VEKRILAKVHSRFIVSLAY-AFQT---KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR 117 (280)
T ss_pred HHHHHHHhCCCCcEeeeeE-EEcC---CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3555788999999999776 4432 2456777776 6999998772 23445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++++|||++........
T Consensus 118 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 152 (280)
T cd05608 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--------------------------------------------- 152 (280)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 153 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il 187 (280)
T cd05608 153 ---------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTL 187 (280)
T ss_pred ---------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHH
Confidence 00013578999999999999999999999999999
Q ss_pred HHhhC---CCCCChhh---HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|||++ ||...... ......+... +..... ..+...+++.+||+.||++|| +++++++||||+...
T Consensus 188 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 188 YEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred HHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 99998 66543221 1111111111 111112 234556999999999999999 889999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=272.29 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=153.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ .+. ....+++++|+ .|++|.+++... .+++..++.++.||+.||+|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQ---DDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3455778899999999887 443 23467788887 599999999543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++.........
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~----------------------------------------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV----------------------------------------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCce-----------------------------------------------
Confidence 999999999999999999999988433111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvl 261 (712)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997543 7899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
+|||++ ||...... ..+..+..... .+..........+++.+||..+|. .|+|+.++++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 66554432 23333332211 111122344556899999985554 38999999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=264.68 Aligned_cols=198 Identities=17% Similarity=0.246 Sum_probs=151.3
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+||||||+|
T Consensus 52 ~~~hp~i~~~~~-~~~---~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~N 126 (316)
T cd05592 52 AWEHPFLTHLFC-TFQ---TKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDN 126 (316)
T ss_pred ccCCCCccceee-EEE---cCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence 468999999887 442 23457777777 5999999985543 48999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.+||+|||++.......
T Consensus 127 ill~~~~~~kL~Dfg~a~~~~~~~-------------------------------------------------------- 150 (316)
T cd05592 127 VLLDKDGHIKIADFGMCKENMNGE-------------------------------------------------------- 150 (316)
T ss_pred eEECCCCCEEEccCcCCeECCCCC--------------------------------------------------------
Confidence 999999999999999884321000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
......+||+.|+|||.+.+..++.++|||||||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf 196 (316)
T cd05592 151 ----------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred ----------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCC
Confidence 00011468999999999998889999999999999999998 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-HHHhcCcCCCCC
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 328 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~eiL~hp~~~~~ 328 (712)
...... .....+... .+...........+|+.+||..+|.+||++ .++++||||...
T Consensus 197 ~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 197 HGEDED-ELFDSILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCCHH-HHHHHHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 544332 233333222 111111223445699999999999999986 588999999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=264.90 Aligned_cols=201 Identities=16% Similarity=0.238 Sum_probs=153.1
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++.. .+||||+.+++ ++.. ...++++||+ .|++|..++.+. +.+++..++.++.||+.||.|||++||+||||
T Consensus 48 il~~~~~hp~i~~~~~-~~~~---~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDi 122 (321)
T cd05591 48 ILALAAKHPFLTALHC-CFQT---KDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122 (321)
T ss_pred HHHhccCCCCccceee-EEEc---CCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 3443 48999999887 4432 3457777777 589999988544 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||++.......
T Consensus 123 kp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------------- 150 (321)
T cd05591 123 KLDNILLDAEGHCKLADFGMCKEGILNG---------------------------------------------------- 150 (321)
T ss_pred CHHHeEECCCCCEEEeecccceecccCC----------------------------------------------------
Confidence 9999999999999999999874311000
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg 192 (321)
T cd05591 151 --------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAG 192 (321)
T ss_pred --------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcC
Confidence 00011468999999999998889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-------CHHHHhcCcCCCCC
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~eiL~hp~~~~~ 328 (712)
||...... .....+...... ......+...+++.+||..+|.+|| ++.++++||||...
T Consensus 193 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 193 QPPFEADNED-DLFESILHDDVL-YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 66544433 333333332211 1111234556999999999999999 89999999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=259.24 Aligned_cols=207 Identities=16% Similarity=0.193 Sum_probs=154.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++||||+.+++ .+.. ...+++++|+ .|++|.+++.. ....+++..+..++.||+.||+|||+.||+|
T Consensus 43 E~~il~~l~hp~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 118 (277)
T cd05607 43 EKEILEKVNSPFIVNLAY-AFES---KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY 118 (277)
T ss_pred HHHHHHhcCCCcEEEEEE-EEec---CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 456789999999999877 4432 3456777776 58999988833 3345889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.......
T Consensus 119 ~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------- 149 (277)
T cd05607 119 RDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------- 149 (277)
T ss_pred ccCChHhEEEcCCCCEEEeeceeeeecCCCc-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||++.+..++.++|||||||++|||
T Consensus 150 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el 187 (277)
T cd05607 150 ------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM 187 (277)
T ss_pred ------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhh---HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~~ 329 (712)
++ ||...... ............+.......+...+++.+||+.||.+||++ ++++.||||+...
T Consensus 188 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 188 VAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 98 65443221 11222222212211112234455699999999999999999 6788999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=267.91 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=154.5
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++++.++||||+++++ .+.. ...+++++|+ .|++|..++.+. ..+++.++..++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQT---TEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEec---CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3577899999999877 4422 3456777776 689999988544 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++.++.++|+|||+++......
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------------- 150 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQS---------------------------------------------------- 150 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCCC----------------------------------------------------
Confidence 9999999999999999999874210000
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 151 --------------------------------------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred --------------------------------------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 00011468999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+++.+||..+|.+||++ .++++||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCc-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66544332 23333332221 1111234455599999999999999976 589999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=263.47 Aligned_cols=199 Identities=19% Similarity=0.260 Sum_probs=152.2
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+.+++ ++. ....+++++|| .|++|.+++... ..+++.++..++.||+.||.|||++||+||||||+|
T Consensus 52 ~~~hp~iv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~N 126 (316)
T cd05619 52 AWEHPFLTHLYC-TFQ---TKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDN 126 (316)
T ss_pred ccCCCcCcceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence 369999999887 442 23457777777 689999999554 348999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.++++|||++........
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------- 151 (316)
T cd05619 127 ILLDTDGHIKIADFGMCKENMLGDA------------------------------------------------------- 151 (316)
T ss_pred EEECCCCCEEEccCCcceECCCCCC-------------------------------------------------------
Confidence 9999999999999998742100000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
......|++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 152 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf 196 (316)
T cd05619 152 -----------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred -----------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence 0011468999999999998889999999999999999999 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH-HHhcCcCCCCCc
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eiL~hp~~~~~~ 329 (712)
..... ......+.... +...........+|+.+||..+|.+||++. ++++||||....
T Consensus 197 ~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 197 HGHDE-EELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCCCH-HHHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 54433 23333333221 111112234456999999999999999996 899999998854
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=259.78 Aligned_cols=199 Identities=17% Similarity=0.126 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gI 103 (712)
++..+|..++||||+++++ ++.+. .....+++++|+ .|++|.+++.+. ..+++.....++.|++.||.|||+ .|+
T Consensus 67 ~E~~~l~~l~h~nIv~~~g-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~ 144 (283)
T PHA02988 67 NEIKNLRRIDSNNILKIYG-FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNK 144 (283)
T ss_pred HHHHHHHhcCCCCEEEEee-eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCC
Confidence 5567899999999999998 44331 223356677777 689999999654 358999999999999999999998 599
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++.....
T Consensus 145 ~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 176 (283)
T PHA02988 145 PYKNLTSVSFLVTENYKLKIICHGLEKILSSP------------------------------------------------ 176 (283)
T ss_pred CCCcCChhhEEECCCCcEEEcccchHhhhccc------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVL 261 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvl 261 (712)
....+|+..|+|||++.+ ..++.++|||||||+
T Consensus 177 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvi 211 (283)
T PHA02988 177 ---------------------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVV 211 (283)
T ss_pred ---------------------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHH
Confidence 000357889999999976 579999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|||++ ||....... ....+. ....++......+...+|+.+||+.||.+|||+.++++
T Consensus 212 l~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 212 LWEIFTGKIPFENLTTKE-IYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHCCCCCCCCCHHH-HHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 999999 776544332 223332 22222222233455669999999999999999999986
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=269.19 Aligned_cols=205 Identities=18% Similarity=0.228 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++.+.. .+++.+++.++.||+.||.|||++||+|
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 47 MERDILAEVNHPFIVKLHY-AFQT---EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred HHHHHHHhCCCCCcccEEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 4556789999999999887 4432 3457777777 5899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------ 153 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHEK------------------------------------------------ 153 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCCC------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|||
T Consensus 154 ------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 191 (318)
T cd05582 154 ------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 191 (318)
T ss_pred ------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeee
Confidence 00114689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+...... ......+...++|.+||+.||.+||+ +.++++||||...
T Consensus 192 ~tg~~p~~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 192 LTGSLPFQGKDRK-ETMTMILKAKLG-MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ccCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99 66544332 233333222211 11122345569999999999999999 7789999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=272.95 Aligned_cols=251 Identities=12% Similarity=0.133 Sum_probs=157.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ ++. ....+++++|+ .|++|.+++... ..+++..++.++.||+.||+|||++||+||
T Consensus 51 E~~il~~l~hp~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHr 125 (377)
T cd05629 51 ERDVLAESDSPWVVSLYY-SFQ---DAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHR 125 (377)
T ss_pred HHHHHHhCCCCCcceEEE-EEE---cCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445788899999999887 443 23467888887 599999999554 448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++++|||+++.+........+ .. ..... .. ...........+
T Consensus 126 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~-~~-~~~~~-------------------~~---~~~~~~~~~~~~ 181 (377)
T cd05629 126 DIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY-QK-LLQGK-------------------SN---KNRIDNRNSVAV 181 (377)
T ss_pred CCCHHHEEECCCCCEEEeecccccccccccccccc-cc-ccccc-------------------cc---cccccccccccc
Confidence 99999999999999999999998643221100000 00 00000 00 000000000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
... .... ....+..+. ...........+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 182 ~~~------~~~~---~~~~~~~~~----------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 242 (377)
T cd05629 182 DSI------NLTM---SSKDQIATW----------KKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL 242 (377)
T ss_pred ccc------cccc---cchhhhhhh----------hhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhh
Confidence 000 0000 000000000 000000111257999999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCC---CCHHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~eiL~hp~~~~~ 328 (712)
+ ||...... ..+..+... ...+......+...+||.+||. +|.+| +|+.++++||||+..
T Consensus 243 tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 243 IGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred cCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9 55443332 223333221 1111111234556699999997 67665 599999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=274.48 Aligned_cols=248 Identities=13% Similarity=0.174 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (376)
T cd05598 50 AERDILAEADNEWVVKLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGFIH 124 (376)
T ss_pred HHHHHHHhCCCCCcceEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4555788999999999887 443 23467788887 5999999995544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++|+|||++..+.......-+ . ..+. ....+.
T Consensus 125 rDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~-----~--------------------~~~~--------~~~~~~ 171 (376)
T cd05598 125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY-----Q--------------------KGDH--------HRQDSM 171 (376)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCCcccccccccccc-----c--------------------cccc--------cccccc
Confidence 999999999999999999999998543211000000 0 0000 000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ...... + .......... . ..............+||+.|+|||++.+..++.++|||||||++|||
T Consensus 172 ~--~~~~~~------~-~~~~~~~~~~----~-~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 172 E--PSEEWS------E-IDRCRLKPLE----R-RRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred c--cccccc------c-cccccccchh----h-hhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0 000000 0 0000000000 0 00000000111235799999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~ 328 (712)
++ ||........ ...+... ...+......+...++|.+|+ .+|.+|+ |+.++++||||...
T Consensus 238 l~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 238 LVGQPPFLADTPAET-QLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhCCCCCCCCCHHHH-HHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 99 6654443322 2222211 111111223455668999876 5999999 99999999999874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=266.36 Aligned_cols=194 Identities=20% Similarity=0.223 Sum_probs=147.5
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+.+...+|||++.+.+ +|.+. .+.+++||. .|+-|.+.+..... .. .++..|++||+.||+|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~---~~~~~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDG---KEIYLVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCC---ceeeeeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 5577789999999877 76443 345666666 56666665633332 33 788899999999999999999999999
Q ss_pred CCCceee-cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 109 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 109 kP~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
||+|||+ +..++++|+|||.++....+ |
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58899999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00234788999999998899999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||.........+..+....+ -...+..+.+|+.+||+.||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i~~~~~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRIQMPKF---SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhhcCCcc---ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 55444333333433333222 23344555699999999999999999999999999
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=293.69 Aligned_cols=213 Identities=20% Similarity=0.223 Sum_probs=174.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++.-+|..++|||+|..|+ + +...+.++|.|||| ||+|.+.+ ..++..++...+.+..|++.||.|||++||||
T Consensus 1283 eEm~vlE~lnHpNlV~YyG-V---EvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1283 EEMKVLEGLNHPNLVRYYG-V---EVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred HHHHHHHhccCccccccCc-e---eecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHHHHhcCcee
Confidence 5667899999999999666 3 44555677888885 99999988 44556889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.+|.+||.|||.+......
T Consensus 1358 RDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~-------------------------------------------------- 1387 (1509)
T KOG4645|consen 1358 RDIKPANILLDFNGLIKYGDFGSAVKIKNN-------------------------------------------------- 1387 (1509)
T ss_pred cCCCccceeeecCCcEEeecccceeEecCc--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
.+++|......+||+.|||||++.+.. ..-++|||||||+.
T Consensus 1388 ------------------------------------~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1388 ------------------------------------AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred ------------------------------------hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence 011111222378999999999997654 67799999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||.| ||...+...+.|..+.-+..|+......+...+||..||..||+.|.++.|+|.|.|-+...+
T Consensus 1432 lEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1432 LEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred EEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 99999 777777778888888777777766666677779999999999999999999999998776544
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=247.80 Aligned_cols=226 Identities=17% Similarity=0.213 Sum_probs=169.1
Q ss_pred ccccccccccCCCC----CcceeeeccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCC
Q 005147 6 LRGERFGVRGDDSN----DFELRKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRS 78 (712)
Q Consensus 6 ~~~~~~~~~~~~~~----~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~ 78 (712)
+.+.+++++..... .+.-|+.|+...+.+++|+|+++++. +|.... ....++++||+...+|.+.+. -.
T Consensus 39 v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n-~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~e 114 (369)
T KOG0665|consen 39 VLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLN-VFTPQKTLEEFQEVYLVMELMDANLCQVIL---ME 114 (369)
T ss_pred hccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeee-ccCccccHHHHHhHHHHHHhhhhHHHHHHH---Hh
Confidence 34555555555443 23348899999999999999999998 554333 334789999999999999884 23
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
++-..+..|+.|++.|+.|||+.||+||||||+||++..+..+|+.|||+++..+.+
T Consensus 115 lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~----------------------- 171 (369)
T KOG0665|consen 115 LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD----------------------- 171 (369)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-----------------------
Confidence 678889999999999999999999999999999999999999999999998432211
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
| ..+.++.|..|
T Consensus 172 ------------~--------------------------------------------------------~mtpyVvtRyy 183 (369)
T KOG0665|consen 172 ------------F--------------------------------------------------------MMTPYVVTRYY 183 (369)
T ss_pred ------------c--------------------------------------------------------ccCchhheeec
Confidence 1 11226889999
Q ss_pred cCcccccCCCCCCccchHHHHHHHHHhhCC--CCCChhhHHHHHhhcc--------------------------------
Q 005147 239 ASPEELAGAPVSCASDIYRLGVLLFELFCP--FSTGEEKTRTMSSLRH-------------------------------- 284 (712)
Q Consensus 239 ~aPE~~~~~~~~~~sDIwSlGvll~eLl~p--f~~~~~~~~~~~~~~~-------------------------------- 284 (712)
+|||++.+..|...+||||+||++.||+++ ++++......+..+..
T Consensus 184 rapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f 263 (369)
T KOG0665|consen 184 RAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISF 263 (369)
T ss_pred cCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccch
Confidence 999999999999999999999999999982 2223222222211110
Q ss_pred -cCCC-----chhhhc---CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 285 -RVLP-----PQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 285 -~~~~-----~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
..+| ...... .....+++.+||..+|++|.+++++|+||||+
T Consensus 264 ~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 264 SELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0111 111111 11223899999999999999999999999997
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-29 Score=263.51 Aligned_cols=202 Identities=19% Similarity=0.234 Sum_probs=153.5
Q ss_pred eeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.++..+ +||||+++++ ++.. ...+++++|+ .|++|..++.+.+ .+++.++..++.||+.||.|||++||+|||
T Consensus 47 ~il~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 47 RVLALAGKHPFLTQLHS-CFQT---KDRLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred HHHHhccCCCCccceee-EEEc---CCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 345444 7999999887 4432 3457778777 5899999885543 499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||+++...... .
T Consensus 122 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------~---------------- 151 (318)
T cd05570 122 LKLDNVLLDSEGHIKIADFGMCKEGILGG----------------------------------V---------------- 151 (318)
T ss_pred CCHHHeEECCCCcEEecccCCCeecCcCC----------------------------------C----------------
Confidence 99999999999999999999874210000 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.....+|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 152 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 152 ----------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred ----------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 0001468999999999999999999999999999999998
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+|+.+||..||.+|||+ .++++||||...
T Consensus 192 G~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 192 GQSPFEGDDED-ELFQSILEDEV-RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CCCCCCCCCHH-HHHHHHHcCCC-CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 66544332 22333322211 1111223455599999999999999999 999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=263.44 Aligned_cols=201 Identities=18% Similarity=0.223 Sum_probs=153.1
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
++..++||||+++++ .+.+ ...+++++|+ .|++|..++... ..+++.++..++.||+.||+|||++||+|||||
T Consensus 49 ~l~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlk 123 (321)
T cd05603 49 LLKNLKHPFLVGLHY-SFQT---AEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLK 123 (321)
T ss_pred HHHhCCCCCccceee-EEEc---CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence 577899999999877 4422 2356777777 589999988543 348999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+||+|||+++......
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 150 (321)
T cd05603 124 PENILLDSQGHVVLTDFGLCKEGVEPE----------------------------------------------------- 150 (321)
T ss_pred HHHeEECCCCCEEEccCCCCccCCCCC-----------------------------------------------------
Confidence 999999999999999999874311100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 151 -------------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred -------------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 00011468999999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+++.+||+.+|.+||++ .++++|+||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 194 PPFYSRDVS-QMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66544322 33333333221 1112234455699999999999999875 599999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=263.39 Aligned_cols=204 Identities=17% Similarity=0.248 Sum_probs=152.2
Q ss_pred cceeeccCCCCC-cccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~n-i~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|++ |+.+++ ++.. .+.++++||+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 50 e~~~l~~~~~~~~i~~~~~-~~~~---~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05587 50 EKRVLALPGKPPFLTQLHS-CFQT---MDRLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIY 124 (324)
T ss_pred HHHHHHhcCCCCceeeeEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 344567777766 555444 4422 3457777777 6999999985543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++|+|||++.......
T Consensus 125 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 155 (324)
T cd05587 125 RDLKLDNVMLDAEGHIKIADFGMCKENIFGG------------------------------------------------- 155 (324)
T ss_pred cCCCHHHeEEcCCCCEEEeecCcceecCCCC-------------------------------------------------
Confidence 9999999999999999999999874211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||++.+..++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 194 (324)
T cd05587 156 -----------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 194 (324)
T ss_pred -----------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHH
Confidence 000114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+++.+||..+|.+|++. +++++||||...
T Consensus 195 ltG~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 195 LAGQPPFDGEDED-ELFQSIMEHNV-SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 98 66544332 23333332221 1111233455699999999999999976 899999999874
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-29 Score=266.53 Aligned_cols=197 Identities=17% Similarity=0.224 Sum_probs=149.1
Q ss_pred CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
+||||+++++ .+.. ...+++++|+ .|++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 54 ~~p~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nil 128 (330)
T cd05586 54 ESPFIVGLKF-SFQT---DSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENIL 128 (330)
T ss_pred CCCcCcceEE-EEec---CCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 7999999877 4422 2456777777 689999998554 34899999999999999999999999999999999999
Q ss_pred ecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccc
Q 005147 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (712)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~ 194 (712)
++.++.++|+|||++....... .
T Consensus 129 i~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------------------ 151 (330)
T cd05586 129 LDATGHIALCDFGLSKANLTDN---------------------------------K------------------------ 151 (330)
T ss_pred ECCCCCEEEecCCcCcCCCCCC---------------------------------C------------------------
Confidence 9999999999999874311100 0
Q ss_pred cccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHhhC---CCC
Q 005147 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
......|++.|+|||++.+.. ++.++|||||||++|+|++ ||.
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 152 ---------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred ---------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 001146899999999997654 8999999999999999998 665
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC----CHHHHhcCcCCCCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 328 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~eiL~hp~~~~~ 328 (712)
..... ..+..+.............+...+|+.+||..+|.+|| ++.++++||||...
T Consensus 199 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 199 AEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 44332 33333332222111111234556999999999999998 79999999999864
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=263.86 Aligned_cols=201 Identities=17% Similarity=0.199 Sum_probs=153.1
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ .+.. ...+++++|+ .|++|.+++.... .+++..++.++.||+.||+|||++||+|||||
T Consensus 49 ~l~~~~h~~Iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlk 123 (325)
T cd05602 49 LLKNVKHPFLVGLHF-SFQT---ADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 123 (325)
T ss_pred HHHhCCCCCCCceeE-EEEc---CCeEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 467899999999877 4422 3456777776 5889999995543 48899999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||+++......
T Consensus 124 p~Nili~~~~~~kl~DfG~a~~~~~~~----------------------------------------------------- 150 (325)
T cd05602 124 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 150 (325)
T ss_pred HHHeEECCCCCEEEccCCCCcccccCC-----------------------------------------------------
Confidence 999999999999999999874321000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 151 -------------------------------------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred -------------------------------------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 00011468999999999999899999999999999999999
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH----HHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----eiL~hp~~~~~ 328 (712)
||...... ..+..+...... ......+...+++.+||+.+|.+||++. ++++|+||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 194 PPFYSRNTA-EMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCHH-HHHHHHHhCCcC-CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66544332 333333322111 1122334555999999999999999865 89999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-29 Score=227.08 Aligned_cols=211 Identities=17% Similarity=0.230 Sum_probs=168.9
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..|+.-+|+.+.|+|||++++ +.. ....+-++++++..+|..+.+.-++.++.+.++.++.|++.||.|||++++.
T Consensus 48 alreicllkelkhknivrl~d-vlh---sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvl 123 (292)
T KOG0662|consen 48 ALREICLLKELKHKNIVRLHD-VLH---SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVL 123 (292)
T ss_pred HHHHHHHHHHhhhcceeehhh-hhc---cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 447778899999999999998 432 3456889999999999999988777799999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||.|.+|+.+|.+|++|||+++.+|.+... |
T Consensus 124 hrdlkpqnllin~ngelkladfglarafgipvrc--------------------------------y------------- 158 (292)
T KOG0662|consen 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRC--------------------------------Y------------- 158 (292)
T ss_pred hccCCcceEEeccCCcEEecccchhhhcCCceEe--------------------------------e-------------
Confidence 9999999999999999999999999877655211 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
...+-|.||++|.++.|.. |+++.|+||.||++.
T Consensus 159 ---------------------------------------------saevvtlwyrppdvlfgakly~tsidmwsagcifa 193 (292)
T KOG0662|consen 159 ---------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193 (292)
T ss_pred ---------------------------------------------eceeeeeeccCcceeeeeehhccchHhhhcchHHH
Confidence 0024599999999999988 999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc----------------------CCCch--hhhcCc----hhHHHHHHcCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR----------------------VLPPQ--LLLKFP----KEASFCLWLLHPEPSG 312 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~----------------------~~~~~--~~~~~~----~~~~li~~~L~~dP~~ 312 (712)
||.. |.+++.+.......+-.. .+|.. +....| .-.++++++|.-+|.+
T Consensus 194 elanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~q 273 (292)
T KOG0662|consen 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQ 273 (292)
T ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCccc
Confidence 9987 777665544444332210 01110 111112 2348999999999999
Q ss_pred CCCHHHHhcCcCCCCCc
Q 005147 313 RPKMGELLQSEFLNEPR 329 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~ 329 (712)
|++++++|+||||....
T Consensus 274 risaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 274 RISAEAALQHPYFSDFS 290 (292)
T ss_pred ccCHHHHhcCccccccC
Confidence 99999999999998753
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=259.16 Aligned_cols=210 Identities=14% Similarity=0.192 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+.+++ ++. ....+++++|+.+++|.+++......+++..++.++.||+.||.|||+.||+|+
T Consensus 53 ~E~~~l~~l~h~nI~~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~ 128 (301)
T cd07873 53 REVSLLKDLKHANIVTLHD-IIH---TEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHR 128 (301)
T ss_pred HHHHHHHhcCCCCcceEEE-EEe---cCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 4566788899999999888 443 234688999998889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 129 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 159 (301)
T cd07873 129 DLKPQNLLINERGELKLADFGLARAKSIPTK------------------------------------------------- 159 (301)
T ss_pred CCCHHHEEECCCCcEEECcCcchhccCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+.. ++.++|||||||++|+|
T Consensus 160 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el 198 (301)
T cd07873 160 -----------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 198 (301)
T ss_pred -----------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHH
Confidence 000034688999999987644 88999999999999999
Q ss_pred hC---CCCCChhhHHH--HHhhccc------------------CCCch-------h-hhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSSLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~~~~~------------------~~~~~-------~-~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||......... +...... ..+.. . ....+...+||.+||+.||.+||
T Consensus 199 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~ 278 (301)
T cd07873 199 STGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI 278 (301)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc
Confidence 99 45433221111 1110000 00100 0 11233455999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.++|+||||.....
T Consensus 279 t~~eil~h~~f~~~~~ 294 (301)
T cd07873 279 SAEEAMKHPYFHCLGE 294 (301)
T ss_pred CHHHHhcCcccccccc
Confidence 9999999999987654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-29 Score=264.62 Aligned_cols=203 Identities=16% Similarity=0.242 Sum_probs=150.8
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++..+ .||||+.+++ .+.. ...+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+||||
T Consensus 48 ~~~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl 122 (327)
T cd05617 48 VFEQASSNPFLVGLHS-CFQT---TSRLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGIIYRDL 122 (327)
T ss_pred HHHhhcCCCCEeeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 44444 7999999877 4422 3457777777 5999999885443 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+||+|||+++...... +
T Consensus 123 kp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------ 151 (327)
T cd05617 123 KLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D------------------ 151 (327)
T ss_pred CHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C------------------
Confidence 9999999999999999999874211000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.....+|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g 192 (327)
T cd05617 152 ---------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 192 (327)
T ss_pred ---------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhC
Confidence 0011468999999999999999999999999999999998
Q ss_pred --CCCCCh------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCCc
Q 005147 268 --PFSTGE------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~~ 329 (712)
||.... ........+..... .......+...+++.+||..||.+|++ +.++++||||....
T Consensus 193 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 193 RSPFDIITDNPDMNTEDYLFQVILEKPI-RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCCCccCCCcccccHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 663211 11112222222111 111122344569999999999999998 57999999998764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=256.94 Aligned_cols=207 Identities=15% Similarity=0.183 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++||||+.+++ .+.. ...+++++++ .|++|.+++.. ....+++.++..++.||+.||.|||+.||+
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 49 NEKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred HHHHHHHhcCCCCEeeeee-eecC---CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 3556788999999999877 4432 2457777776 58999998843 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05605 125 YRDLKPENILLDDYGHIRISDLGLAVEIPEGE------------------------------------------------ 156 (285)
T ss_pred ecCCCHHHEEECCCCCEEEeeCCCceecCCCC------------------------------------------------
Confidence 99999999999999999999999874321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++||||+||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~e 193 (285)
T cd05605 157 -------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred hhC---CCCCChhhH---HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||....... .....+... .+.......+...+|+.+||..||.+|| ++.++++||||....
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 194 MIEGKSPFRQRKEKVKREEVERRVKED-QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred HHHCCCCCCCCchhhHHHHHHHHhhhc-ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 998 665433221 111222211 1111112234456999999999999999 899999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-29 Score=243.21 Aligned_cols=204 Identities=17% Similarity=0.210 Sum_probs=164.1
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDL 108 (712)
+++...+-|-||+.|+ +|. ....+.|.||+.+..+..+|+.-.+.+++..+-++...++.||.||.. +||+|||+
T Consensus 143 vv~~s~dcpyIV~c~G-yFi---~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDv 218 (391)
T KOG0983|consen 143 VVLKSHDCPYIVQCFG-YFI---TNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV 218 (391)
T ss_pred HHhhccCCCeeeeeee-EEe---eCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeeccc
Confidence 3456677899999998 332 223467788888888888887767779999999999999999999997 59999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++..|+||+||||++...-...
T Consensus 219 KPSNILlDe~GniKlCDFGIsGrlvdSk---------------------------------------------------- 246 (391)
T KOG0983|consen 219 KPSNILLDERGNIKLCDFGISGRLVDSK---------------------------------------------------- 246 (391)
T ss_pred CccceEEccCCCEEeecccccceeeccc----------------------------------------------------
Confidence 9999999999999999999983321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHHHHh
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll~eL 265 (712)
..+...|.+.|||||.+-- ..|+.++||||||++++||
T Consensus 247 ---------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveL 287 (391)
T KOG0983|consen 247 ---------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVEL 287 (391)
T ss_pred ---------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhh
Confidence 0112468999999999843 3499999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.| ||......+..+..+..... |.+. ...+...+|+..||..|+.+||...++|+|||+....
T Consensus 288 aTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 288 ATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred hcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 99 88777777777777776444 3332 2457777999999999999999999999999998763
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=265.71 Aligned_cols=205 Identities=21% Similarity=0.211 Sum_probs=150.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++|+||+++++ ++.. ...+++++|| .+++|.... ..++..+..|++||+.||+|||++||+|
T Consensus 121 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH 191 (353)
T PLN00034 121 REIEILRDVNHPNVVKCHD-MFDH---NGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVH 191 (353)
T ss_pred HHHHHHHhCCCCCcceeee-Eecc---CCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999887 5532 3356677776 588886532 2567788899999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++...... .
T Consensus 192 rDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~----------------------------------------------- 223 (353)
T PLN00034 192 RDIKPSNLLINSAKNVKIADFGVSRILAQTM-D----------------------------------------------- 223 (353)
T ss_pred cCCCHHHEEEcCCCCEEEcccccceeccccc-c-----------------------------------------------
Confidence 9999999999999999999999874321100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 260 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGv 260 (712)
......|+..|+|||.+.. ...+.++|||||||
T Consensus 224 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGv 261 (353)
T PLN00034 224 ------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGV 261 (353)
T ss_pred ------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHH
Confidence 0001468999999998843 22467999999999
Q ss_pred HHHHhhC---CCCCCh--hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|||++ ||.... .....+..+.....+.......+...+||.+||..||++|||+.|+|+||||.....
T Consensus 262 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 262 SILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 9999998 554221 112222222222222222233455669999999999999999999999999998643
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=263.94 Aligned_cols=206 Identities=17% Similarity=0.166 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+.+++ ++.+ ...+++++|| .|++|.+++...+ .+++..+..++.||+.||.|||+. +|+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~iv 126 (333)
T cd06650 52 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIM 126 (333)
T ss_pred HHHHHHHHCCCCcccceeE-EEEE---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 4556788899999999888 4432 3457777777 5899999995543 489999999999999999999985 799
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.+|++|||++......
T Consensus 127 H~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------------------------------------------------- 157 (333)
T cd06650 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 157 (333)
T ss_pred ecCCChhhEEEcCCCCEEEeeCCcchhhhhh-------------------------------------------------
Confidence 9999999999999999999999987322100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~ 194 (333)
T cd06650 158 -------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (333)
T ss_pred -------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 0001357899999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHH--HH-----------------------------------------hhcccCCCchhhh-cCch
Q 005147 265 LFC---PFSTGEEKTRT--MS-----------------------------------------SLRHRVLPPQLLL-KFPK 297 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~--~~-----------------------------------------~~~~~~~~~~~~~-~~~~ 297 (712)
|++ ||......... +. .+.....+..... ...+
T Consensus 195 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (333)
T cd06650 195 MAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAE 274 (333)
T ss_pred HHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHH
Confidence 998 55432211100 00 0000000000011 1234
Q ss_pred hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+|+.+||+.||++|||+.++++||||+...
T Consensus 275 ~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 275 FQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred HHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 45999999999999999999999999998653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-29 Score=268.95 Aligned_cols=239 Identities=15% Similarity=0.211 Sum_probs=158.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~l~~~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~givHr 125 (360)
T cd05627 51 ERDILVEADGAWVVKMFY-SFQ---DKRNLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFIHR 125 (360)
T ss_pred HHHHHHhCCCCCEeeEEE-EEE---cCCEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 444678899999999887 442 23467777777 5899999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++............ .. . ... ...++.+.....
T Consensus 126 DLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-~~-----~-~~~------------~~~~~~~~~~~~-------- 178 (360)
T cd05627 126 DIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-RN-----L-THN------------PPSDFSFQNMNS-------- 178 (360)
T ss_pred CCCHHHEEECCCCCEEEeeccCCcccccccccccc-cc-----c-ccC------------Cccccccccccc--------
Confidence 99999999999999999999998654322100000 00 0 000 000000000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+.............+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 179 ----------------------------~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 179 ----------------------------KRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ----------------------------ccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence 0000000000000112257999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+... .+|+. ....+...+||.+|+ .+|.+|+ ++.++++||||....
T Consensus 231 tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 231 IGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred cCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCC
Confidence 9 66544332 222222221 12221 123345568999877 4999998 589999999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=254.23 Aligned_cols=209 Identities=13% Similarity=0.158 Sum_probs=153.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++.+++ .+.. ...+++++|+ .+++|..++.+....+++..++.++.||+.||.|||+.||+||
T Consensus 52 e~~~l~~l~h~~ii~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~ 127 (282)
T cd06643 52 EIDILASCDHPNIVKLLD-AFYY---ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127 (282)
T ss_pred HHHHHHHCCCCCeeeEEE-EEee---CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 445788899999999888 4422 2345666666 6889998885545568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 128 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 158 (282)
T cd06643 128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQ------------------------------------------------- 158 (282)
T ss_pred CCCcccEEEccCCCEEEcccccccccccccc-------------------------------------------------
Confidence 9999999999999999999998743211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
......++..|+|||.+. +..++.++|||||||+
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 197 (282)
T cd06643 159 -----------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 197 (282)
T ss_pred -----------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHH
Confidence 000135788999999983 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|||++ ||.........................+ ....+|+.+||+.+|.+||++.++++||||.....
T Consensus 198 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred HHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 999998 5554433322222222111111111222 34569999999999999999999999999986543
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=261.41 Aligned_cols=207 Identities=17% Similarity=0.250 Sum_probs=152.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+.+++ ++.. ...+++++|+ .|++|.+++.+....+++.+++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (331)
T cd05597 51 ERDVLVNGDRRWITNLHY-AFQD---ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHR 126 (331)
T ss_pred HHHHHHhCCCCCCCceEE-EEec---CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEC
Confidence 344677789999999887 5532 3457777776 6999999996655569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++|+|||++........
T Consensus 127 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 157 (331)
T cd05597 127 DIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------- 157 (331)
T ss_pred CCCHHHEEECCCCCEEEEECCceeecCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvl 261 (712)
......+|++.|+|||++.. ..++.++|||||||+
T Consensus 158 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~ 197 (331)
T cd05597 158 ----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVC 197 (331)
T ss_pred ----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhH
Confidence 00011368999999999863 347889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc----cCCCchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||...... ..+..+.. ...++......+...+|+.+||..+++ .|+++.++++||||...
T Consensus 198 l~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 198 MYEMLYGETPFYAESLV-ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999999 66544322 22222221 112222222344556999998865444 37899999999999875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=251.89 Aligned_cols=210 Identities=16% Similarity=0.179 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++|+|++++++ ++.+ ...+++++|+ .|++|.+++.+.. .+++..+..++.||+.||+|||+.||+|
T Consensus 51 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 125 (265)
T cd06631 51 EEVDLLKSLKHVNIVQYLG-TCLD---DNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCVVH 125 (265)
T ss_pred HHHHHHHhcCCCCEeeEee-Eeec---CCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 3455788999999999888 4432 2466777776 6999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+......... ... +
T Consensus 126 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~------------~- 162 (265)
T cd06631 126 RDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH------------S- 162 (265)
T ss_pred CCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc------------c-
Confidence 999999999999999999999987433211000 000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 163 ---------------------------------~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l 201 (265)
T cd06631 163 ---------------------------------N--------MLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM 201 (265)
T ss_pred ---------------------------------c--------cccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH
Confidence 0 00013578999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...+........... ...+...........+++.+||..+|.+||++.++++||||
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 202 ATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99 56544333222222222 22222222223445599999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=255.62 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=151.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|||++++++ ++. ....+++++++..++|.+++.. .+..+++.+++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 48 REISLLKELQHPNIVCLQD-VLM---QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred HHHHHHHhcCCCCEeeeEE-EEe---eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788899999999888 443 2346788888877899998843 235589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++...+....
T Consensus 124 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 156 (285)
T cd07861 124 HRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR----------------------------------------------- 156 (285)
T ss_pred ecCCCHHHEEEcCCCcEEECcccceeecCCCcc-----------------------------------------------
Confidence 999999999999999999999998843221100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 193 (285)
T cd07861 157 -------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA 193 (285)
T ss_pred -------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence 000135688999999887654 789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-------------------CCC--------chhhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............+... ..+ .......++..++|.+||..||.+|
T Consensus 194 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 273 (285)
T cd07861 194 EMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKR 273 (285)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 454333222221111100 000 0011123445589999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
||+.+++.||||
T Consensus 274 pt~~~ll~~~~~ 285 (285)
T cd07861 274 ISAKKALNHPYF 285 (285)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=252.46 Aligned_cols=205 Identities=17% Similarity=0.209 Sum_probs=148.9
Q ss_pred eeeccC-CCCCcccccccccccccc--cCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~~--~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+ +|+|++++++.+...... ...+++++|+ .+++|.+++.. ....+++..++.++.||+.||+|||++||+
T Consensus 54 ~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~iv 133 (272)
T cd06637 54 NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 133 (272)
T ss_pred HHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 345555 799999988843322221 2356777777 57899999854 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++....... .
T Consensus 134 h~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~-~---------------------------------------------- 166 (272)
T cd06637 134 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-G---------------------------------------------- 166 (272)
T ss_pred cCCCCHHHEEECCCCCEEEccCCCceeccccc-c----------------------------------------------
Confidence 99999999999999999999999874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 259 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlG 259 (712)
......|+..|+|||++. +..++.++||||||
T Consensus 167 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 203 (272)
T cd06637 167 -------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 203 (272)
T ss_pred -------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence 001145788999999986 33588899999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++|||++ ||................ .+...... .....+|+.+||..+|.+|||+.+++.||||
T Consensus 204 v~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 204 ITAIEMAEGAPPLCDMHPMRALFLIPRNP-APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHhCCCCccccCHHHHHHHHhcCC-CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99999999 454333222222211111 11111112 2345599999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=251.37 Aligned_cols=209 Identities=16% Similarity=0.204 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .+++|.+++... ..+++..+..++.||+.||+|||++|++|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH 129 (267)
T cd06628 55 REIALLKELQHENIVQYLG-SSLD---ADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEEe---CCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 4456788899999999888 3322 2355666666 688999999554 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||.++.......... .
T Consensus 130 ~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------~-------------- 165 (267)
T cd06628 130 RDIKGANILVDNKGGIKISDFGISKKLEANSLSTK------------------------------T-------------- 165 (267)
T ss_pred ccCCHHHEEEcCCCCEEecccCCCcccccccccCC------------------------------c--------------
Confidence 99999999999999999999998854321100000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 166 ----------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l 205 (267)
T cd06628 166 ----------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM 205 (267)
T ss_pred ----------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHH
Confidence 0000013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... .....+.....+...........+++.+||+.+|.+||++.++++||||
T Consensus 206 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 206 LTGKHPFPDCTQL-QAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhCCCCCCCccHH-HHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 98 66543332 2223333333333222233455599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=262.59 Aligned_cols=219 Identities=16% Similarity=0.201 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|..++||||+++++.+.........+++++++.+++|.+++.... .+++.++..++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 131 (334)
T cd07855 53 RELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVIHR 131 (334)
T ss_pred HHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 45667889999999998873322233445688999998889999995544 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 132 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------ 163 (334)
T cd07855 132 DLKPSNLLVNEDCELRIGDFGMARGLSSSPTE------------------------------------------------ 163 (334)
T ss_pred CCCHHHEEEcCCCcEEecccccceeecccCcC------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.........|+.+|+|||.+.+ ..++.++|||||||++|||
T Consensus 164 --------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el 205 (334)
T cd07855 164 --------------------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEM 205 (334)
T ss_pred --------------------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHH
Confidence 0000011467899999999866 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--cC--------------------CC---ch-----hhhcCchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--RV--------------------LP---PQ-----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--~~--------------------~~---~~-----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
++ ||...... ..+..+.. +. .+ .. .....+...++|.+||+.+|.+
T Consensus 206 ~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 284 (334)
T cd07855 206 LGRRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE 284 (334)
T ss_pred HcCCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhh
Confidence 98 55433221 11111000 00 00 00 1112345559999999999999
Q ss_pred CCCHHHHhcCcCCCCCcCchH
Q 005147 313 RPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
|||+.++++||||.....+..
T Consensus 285 Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 285 RITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred CcCHHHHHhChhhhhccCCcc
Confidence 999999999999987766443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=276.47 Aligned_cols=209 Identities=14% Similarity=0.124 Sum_probs=150.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|..++||||+++++ ++.. .+..++++++.+++|.+++... .......+++.|+.||+.||+|||++|
T Consensus 212 ~Ei~il~~l~HpnIv~l~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g 287 (501)
T PHA03210 212 NEILALGRLNHENILKIEE-ILRS---EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK 287 (501)
T ss_pred HHHHHHHhCCCCCcCcEeE-EEEE---CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 4566789999999999887 5533 2356777777778888887332 122345678899999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||||+|||++.++.+||+|||++..+......
T Consensus 288 IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-------------------------------------------- 323 (501)
T PHA03210 288 LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA-------------------------------------------- 323 (501)
T ss_pred eecCCCCHHHEEECCCCCEEEEeCCCceecCccccc--------------------------------------------
Confidence 999999999999999999999999998543221000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+|+..|+|||++.+..++.++|||||||++
T Consensus 324 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 358 (501)
T PHA03210 324 ---------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358 (501)
T ss_pred ---------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence 00014689999999999999999999999999999
Q ss_pred HHhhC----CCCCC--hhhHHHHHhhcc-----cCCCc-----------------------hhh--hcCchhHHHHHHcC
Q 005147 263 FELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLWLL 306 (712)
Q Consensus 263 ~eLl~----pf~~~--~~~~~~~~~~~~-----~~~~~-----------------------~~~--~~~~~~~~li~~~L 306 (712)
|||++ |+... .........+.. ..+|. .+. ....+..++|.+||
T Consensus 359 ~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL 438 (501)
T PHA03210 359 LDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKML 438 (501)
T ss_pred HHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHh
Confidence 99997 33211 111111111110 00010 000 01123347799999
Q ss_pred CCCCCCCCCHHHHhcCcCCCCC
Q 005147 307 HPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 307 ~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.+||.+|||+.|+|+||||...
T Consensus 439 ~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 439 TFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred ccCcccCcCHHHHhhChhhhcC
Confidence 9999999999999999999765
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=253.72 Aligned_cols=207 Identities=20% Similarity=0.272 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++|||++.+++ ++.. ...+++++++.|++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 123 (286)
T cd07832 48 REIKALQACQHPYVVKLLD-VFPH---GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHR 123 (286)
T ss_pred HHHHHHHhCCCCCCcceee-EEec---CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3456788899999999888 4422 34677888888999999996555669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 124 dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07832 124 DLKPANLLISADGVLKIADFGLARLFSEEEPR------------------------------------------------ 155 (286)
T ss_pred CcCHHHEEEcCCCcEEEeeeeecccccCCCCC------------------------------------------------
Confidence 99999999999999999999988433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......|+.+|+|||.+.+.. ++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l 194 (286)
T cd07832 156 -----------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAEL 194 (286)
T ss_pred -----------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHH
Confidence 000135789999999987654 68999999999999999
Q ss_pred hC--CCCCChhhHHHHHhhccc---------------------CCCc--------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC--PFSTGEEKTRTMSSLRHR---------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~~---------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ |++...........+... ..+. ..........++|.+||..+|.+||
T Consensus 195 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 274 (286)
T cd07832 195 LNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL 274 (286)
T ss_pred HcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCC
Confidence 99 332222211111111100 0000 0011223445999999999999999
Q ss_pred CHHHHhcCcCCC
Q 005147 315 KMGELLQSEFLN 326 (712)
Q Consensus 315 t~~eiL~hp~~~ 326 (712)
|++++|+||||.
T Consensus 275 ~~~~~l~h~~~~ 286 (286)
T cd07832 275 SAAEALRHPYFT 286 (286)
T ss_pred CHHHHhhCcCcC
Confidence 999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=248.51 Aligned_cols=203 Identities=19% Similarity=0.240 Sum_probs=157.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|||++++++ .+.. ...+++++|+ .|++|.+++... ...+++..+..++.||+.||.|||+.||+|
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h 124 (256)
T cd08529 49 EARVLAKLDSSYIIRYYE-SFLD---KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILH 124 (256)
T ss_pred HHHHHHhcCCCCeehhee-eecc---CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 445688899999999887 3322 2456777776 699999999543 456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 125 ~dl~~~nili~~~~~~~l~df~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd08529 125 RDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN------------------------------------------------ 156 (256)
T ss_pred CCCCcceEEEeCCCCEEEcccccceeccCccc------------------------------------------------
Confidence 99999999999999999999998743321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+++|+|||++.+..++.++|||||||++|+|
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 194 (256)
T cd08529 157 ------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYEC 194 (256)
T ss_pred ------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence 00013578899999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 195 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 195 CTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 98 66544432 3333333343433322334556699999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=248.89 Aligned_cols=205 Identities=16% Similarity=0.229 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++.+++ .+. .....+++++++ .+++|.+++.. ....+++.+++.++.||+.||++||+.||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~--~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~ 124 (257)
T cd08223 48 QEAQLLSQLKHPNIVAYRE-SWE--GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124 (257)
T ss_pred HHHHHHHhCCCCCeeeeee-eec--CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3456788899999999777 332 122345677766 68999999954 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++........
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~----------------------------------------------- 157 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD----------------------------------------------- 157 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceEEecccCC-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ 194 (257)
T cd08223 158 -------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYE 194 (257)
T ss_pred -------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHH
Confidence 0001357889999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.++++||||
T Consensus 195 l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 195 MATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999 55443332 2223333333333223344556699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=265.64 Aligned_cols=205 Identities=16% Similarity=0.179 Sum_probs=152.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ .+. ....+++++|+ .|++|.+++... .+++..++.++.||+.||.|||++||+||
T Consensus 93 e~~i~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 166 (371)
T cd05622 93 ERDIMAFANSPWVVQLFY-AFQ---DDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHR 166 (371)
T ss_pred HHHHHHhCCCCCCCeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 445678899999999887 442 23457788877 589999998543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||++.........
T Consensus 167 DLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~------------------------------------------------ 198 (371)
T cd05622 167 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV------------------------------------------------ 198 (371)
T ss_pred CCCHHHEEECCCCCEEEEeCCceeEcCcCCcc------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+.. ++.++|||||||++
T Consensus 199 -----------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil 237 (371)
T cd05622 199 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 237 (371)
T ss_pred -----------------------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHH
Confidence 001146899999999986543 78999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... .....+...... +......+...++|.+||..++.+ |+++.++++|+||+..
T Consensus 238 yell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 238 YEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 99998 66544332 233333322211 112223345559999999844432 7899999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=260.63 Aligned_cols=214 Identities=18% Similarity=0.132 Sum_probs=149.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++..++.++.||+.||+|||++||+|
T Consensus 49 e~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 124 (327)
T cd08227 49 ELHVSKLFNHPNIVPYRA-TFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVH 124 (327)
T ss_pred HHHHHHhcCCCCeeeEEE-EEEE---CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 445778899999999887 5532 2356677776 689999998442 334899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+++.||+....... +|....
T Consensus 125 ~dlkp~Nil~~~~~~~~l~~~~~~~~~~~------------------------------------~~~~~~--------- 159 (327)
T cd08227 125 RSVKASHILISVDGKVYLSGLRSNLSMIN------------------------------------HGQRLR--------- 159 (327)
T ss_pred CCCChhhEEEecCCcEEEcccchhhcccc------------------------------------cccccc---------
Confidence 99999999999999999999876522100 000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll~ 263 (712)
...+ + .....++..|+|||++.+ ..++.++|||||||++|
T Consensus 160 ---------------------~~~~--------------~---~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~ 201 (327)
T cd08227 160 ---------------------VVHD--------------F---PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 201 (327)
T ss_pred ---------------------cccc--------------c---cccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence 0000 0 001245778999999976 35899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC--------Cc------------------------------------hhhhcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL--------PP------------------------------------QLLLKFP 296 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~--------~~------------------------------------~~~~~~~ 296 (712)
||++ ||.................. ++ ......+
T Consensus 202 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
T cd08227 202 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSP 281 (327)
T ss_pred HHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCH
Confidence 9998 55433222211111111000 00 0001123
Q ss_pred hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 297 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 297 ~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
...+|+.+||+.||++|||+.++|+||||+..
T Consensus 282 ~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 282 HFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 45589999999999999999999999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=251.47 Aligned_cols=208 Identities=19% Similarity=0.197 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ .+.. .....+++++++ .+++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H 129 (266)
T cd06651 53 CEIQLLKNLQHERIVQYYG-CLRD-RAEKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVH 129 (266)
T ss_pred HHHHHHHHcCCCCeeeEEE-EEEc-CCCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3445788999999999887 4432 223456666666 6889999995543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++......... +.
T Consensus 130 ~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 164 (266)
T cd06651 130 RDIKGANILRDSAGNVKLGDFGASKRLQTICMS-------------------------------GT-------------- 164 (266)
T ss_pred CCCCHHHEEECCCCCEEEccCCCcccccccccc-------------------------------CC--------------
Confidence 999999999999999999999987432110000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el 202 (266)
T cd06651 165 ------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEM 202 (266)
T ss_pred ------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHH
Confidence 00013468899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++ ||.......... ........+.+... .+...+++ .||..+|++||+++++++||||+
T Consensus 203 ~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 203 LTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 98 554433222222 22222222222222 33344677 67778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=259.05 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=151.6
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++... .|++|+.+++ ++. ..+.+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+||||
T Consensus 53 ~l~~~~~~~~i~~~~~-~~~---~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 127 (323)
T cd05616 53 VLALSGKPPFLTQLHS-CFQ---TMDRLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127 (323)
T ss_pred HHHhccCCCeEeeEEE-EEe---cCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEecCC
Confidence 34444 5777777666 442 23457777777 6899999985543 4899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++.++.+||+|||+++.......
T Consensus 128 kp~Nill~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------- 156 (323)
T cd05616 128 KLDNVMLDSEGHIKIADFGMCKENMWDGV--------------------------------------------------- 156 (323)
T ss_pred CHHHeEECCCCcEEEccCCCceecCCCCC---------------------------------------------------
Confidence 99999999999999999998843211100
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 197 (323)
T cd05616 157 ---------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (323)
T ss_pred ---------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||...... .....+...... ......+...+++.+||+.+|.+|++ ..++++||||....
T Consensus 198 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 198 QAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 66544332 333333322211 11123455669999999999999997 48999999998653
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=252.16 Aligned_cols=211 Identities=16% Similarity=0.181 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...++.++|+|++.+++ .+.. ...+++++++ .|++|..++.+....+++..++.++.||+.+|.|||++||+||
T Consensus 59 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 134 (292)
T cd06644 59 EIEILATCNHPYIVKLLG-AFYW---DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHR 134 (292)
T ss_pred HHHHHHhCCCCcEeeeEE-EEEe---CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 445688899999999888 3322 2356677776 6888988875555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||.+.......
T Consensus 135 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 164 (292)
T cd06644 135 DLKAGNVLLTLDGDIKLADFGVSAKNVKTL-------------------------------------------------- 164 (292)
T ss_pred CCCcceEEEcCCCCEEEccCccceeccccc--------------------------------------------------
Confidence 999999999999999999999873221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
.......+++.|+|||.+. ...++.++|||||||+
T Consensus 165 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i 204 (292)
T cd06644 165 ----------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 204 (292)
T ss_pred ----------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHH
Confidence 0001135788999999985 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCc-h-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+|||++ ||...... .....+.....+. . .........+++.+||..+|.+||++.++++||||........
T Consensus 205 l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 205 LIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchh
Confidence 999999 44433322 2222222222221 1 1122345569999999999999999999999999987655433
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=250.98 Aligned_cols=203 Identities=18% Similarity=0.271 Sum_probs=148.6
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..+ +|+|++++++ ++.+. ....+++++|+.+++|.+++......+++.+++.++.||+.||.|||+.||+||
T Consensus 47 e~~~l~~l~~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~ 124 (282)
T cd07831 47 EIQALRRLSPHPNILRLIE-VLFDR-KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHR 124 (282)
T ss_pred HHHHHhhcCCCCCccceEE-EEecC-CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 44455665 5999999888 44333 224678888888789999886544568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++. +.++++|||.+....... .
T Consensus 125 dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~---------------- 154 (282)
T cd07831 125 DIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------P---------------- 154 (282)
T ss_pred ccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------C----------------
Confidence 99999999999 999999999884321110 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.....++.+|+|||.+.. ..++.++|||||||++|||
T Consensus 155 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el 192 (282)
T cd07831 155 ------------------------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEI 192 (282)
T ss_pred ------------------------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHH
Confidence 001346889999998754 4478999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---c-----------------CCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---R-----------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~-----------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||....... ....+.. . ..+.. .........++|.+||.++|++||
T Consensus 193 ~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 271 (282)
T cd07831 193 LSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI 271 (282)
T ss_pred HcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc
Confidence 98 554332211 1111100 0 00100 011224455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 272 ~~~~~l~~~~~ 282 (282)
T cd07831 272 TAKQALRHPYF 282 (282)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=254.98 Aligned_cols=206 Identities=16% Similarity=0.199 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++.+++ .+.+ ...+++++++ .|++|.+++.. ....+++.+++.++.||+.||.|||+.||+|
T Consensus 50 E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05630 50 EKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125 (285)
T ss_pred HHHHHHhCCCCCeeeeeE-EEec---CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 456788999999999877 4422 2356777776 68999998833 3345899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++..+.++++|||++.......
T Consensus 126 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------- 156 (285)
T cd05630 126 RDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------- 156 (285)
T ss_pred CCCCHHHEEECCCCCEEEeeccceeecCCCc-------------------------------------------------
Confidence 9999999999999999999999873221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 157 ------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 194 (285)
T cd05630 157 ------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 194 (285)
T ss_pred ------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHH
Confidence 00013579999999999988899999999999999999
Q ss_pred hC---CCCCChhh--HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||...... ....................+...+|+.+||+.||.+||| +.++++||||+..
T Consensus 195 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 195 IAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 98 66543211 1111111111111111122344569999999999999999 8999999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-28 Score=283.33 Aligned_cols=206 Identities=17% Similarity=0.191 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
.+..+|..+.||||+.+++.++ + .....++++||| .+++|.++|.. ....+++..++.|+.||+.||+|||+.
T Consensus 61 ~EI~IL~~L~HPNIVrl~d~f~-d-e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g 138 (1021)
T PTZ00266 61 IEVNVMRELKHKNIVRYIDRFL-N-KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLK 138 (1021)
T ss_pred HHHHHHHHcCCCCcCeEEEEEE-e-cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 3556788999999999988333 2 233467788887 58999999843 234589999999999999999999984
Q ss_pred ------CceeccCCCCceeecCC-----------------CcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 102 ------GIVVHNVRPSCFVMSSF-----------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 102 ------gIvHrDLkP~NIll~~~-----------------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+||||||||+||||+.. +.+||+|||++...+...
T Consensus 139 ~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------------------- 196 (1021)
T PTZ00266 139 DGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------------------- 196 (1021)
T ss_pred cccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc----------------------
Confidence 49999999999999642 236777776663221110
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
......||+.|
T Consensus 197 ---------------------------------------------------------------------~~~s~vGTp~Y 207 (1021)
T PTZ00266 197 ---------------------------------------------------------------------MAHSCVGTPYY 207 (1021)
T ss_pred ---------------------------------------------------------------------cccccCCCccc
Confidence 00014689999
Q ss_pred cCcccccCC--CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 239 ASPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 239 ~aPE~~~~~--~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|||++.+. .++.++|||||||+||||++ ||.........+..+..... .......+...+||..||..+|.+|
T Consensus 208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeR 286 (1021)
T PTZ00266 208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKER 286 (1021)
T ss_pred cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHC
Confidence 999998653 48999999999999999999 66654444444444433221 1122234556699999999999999
Q ss_pred CCHHHHhcCcCCC
Q 005147 314 PKMGELLQSEFLN 326 (712)
Q Consensus 314 pt~~eiL~hp~~~ 326 (712)
|++.++|+|+||.
T Consensus 287 PSa~QlL~h~~ik 299 (1021)
T PTZ00266 287 PSALQCLGYQIIK 299 (1021)
T ss_pred cCHHHHhccHHHh
Confidence 9999999999996
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=260.44 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=153.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..++|+||+.+++ .+. ....+++++|| .|++|.+++.+....+++..++.|+.||+.||+|||++||+|||
T Consensus 52 ~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrD 127 (332)
T cd05623 52 RDVLVNGDNQWITTLHY-AFQ---DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRD 127 (332)
T ss_pred HHHHhhCCCCCEeeEEE-EEe---cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 34677789999999877 443 23467777776 69999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||++........
T Consensus 128 lkp~Nili~~~~~~kL~DfG~a~~~~~~~~-------------------------------------------------- 157 (332)
T cd05623 128 IKPDNILMDMNGHIRLADFGSCLKLMEDGT-------------------------------------------------- 157 (332)
T ss_pred CCHHHEEECCCCCEEEeecchheecccCCc--------------------------------------------------
Confidence 999999999999999999998743211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvll 262 (712)
......+||+.|+|||++. ...++.++|||||||++
T Consensus 158 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil 198 (332)
T cd05623 158 ---------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM 198 (332)
T ss_pred ---------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH
Confidence 0001146899999999986 34589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|. .|+++.++++||||...
T Consensus 199 ~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 199 YEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 99999 66544332 233333221 12332233345566999999966554 36899999999999875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=255.30 Aligned_cols=239 Identities=16% Similarity=0.187 Sum_probs=161.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|..++|+||+++++ .+.. ...+++++|+ .|++|.+++.. .+..+++..++.++.||+.||+|||+.||+
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 50 TEQEILATLDHPFLPTLYA-SFQT---ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred HHHHHHHhCCCCCchhhee-eeec---CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788999999999887 4422 3456777776 68999999954 345689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++.......... .. . ...+... ..
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~---~~---~--------------------~~~~~~~-------~~ 172 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV---SK---A--------------------LRKGSRR-------SS 172 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhhccccccccc---cc---c--------------------ccccccc-------cc
Confidence 99999999999999999999999985432210000 00 0 0000000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
... .. ..... . .........+|+..|+|||.+.+..++.++|||||||++|+
T Consensus 173 ~~~-----~~----------~~~~~---------~----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 173 VNS-----IP----------SETFS---------E----EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred ccc-----cc----------hhhhc---------c----cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 000 00 00000 0 00001122578999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~eiL~hp~~~~~~~ 330 (712)
|++ ||...................+......+...+++.+||..+|++||| ++++|+||||+....
T Consensus 225 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 225 MLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999 555443332222222222111111113445569999999999999999 999999999987643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-28 Score=254.58 Aligned_cols=212 Identities=18% Similarity=0.223 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+|++++++ ++.. .....+++++|+.+++|.+++......+++.+++.++.||+.||.|||+.||+||
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (309)
T cd07845 55 REITLLLNLRHPNIVELKE-VVVG-KHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHR 132 (309)
T ss_pred HHHHHHHhCCCCCCcceEE-EEec-CCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 4556788899999999887 3322 2334578889998889999986555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+....
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------- 163 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLARTYGLPAK------------------------------------------------- 163 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeeecCCccC-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|||
T Consensus 164 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 202 (309)
T cd07845 164 -----------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAEL 202 (309)
T ss_pred -----------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHH
Confidence 00002357889999998764 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc---------------------CCCch--------hhhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR---------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---------------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||...... .....+... ..+.. +....+...+||.+||+.||++|
T Consensus 203 ~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 203 LAHKPLLPGKSEI-EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 99 45433322 111111110 00000 01123445589999999999999
Q ss_pred CCHHHHhcCcCCCCCcCc
Q 005147 314 PKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~ 331 (712)
||+.++|+||||.....+
T Consensus 282 ~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 282 ATAEEALESSYFKEKPLP 299 (309)
T ss_pred cCHHHHhcChhhccCCCC
Confidence 999999999999866543
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=247.27 Aligned_cols=202 Identities=16% Similarity=0.178 Sum_probs=152.2
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..+++.++|+|++++++ .+.. ...+++++++ .+++|.+++......+++..++.++.||+.||.|||+.||+|+|
T Consensus 49 ~~~~~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d 124 (256)
T cd06612 49 ISILKQCDSPYIVKYYG-SYFK---NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD 124 (256)
T ss_pred HHHHHhCCCCcEeeeee-eeec---CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 34577789999999888 3322 2456777776 68999999966566789999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||++........
T Consensus 125 l~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 154 (256)
T cd06612 125 IKAGNILLNEEGQAKLADFGVSGQLTDTMA-------------------------------------------------- 154 (256)
T ss_pred CCcceEEECCCCcEEEcccccchhcccCcc--------------------------------------------------
Confidence 999999999999999999998743211100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 155 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~ 194 (256)
T cd06612 155 ----------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE 194 (256)
T ss_pred ----------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh
Confidence 0001346888999999988889999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCc-hhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||....... .+........+. ... .......+++.+||+.+|.+|||+.++|+||||
T Consensus 195 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 195 GKPPYSDIHPMR-AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCCCCCCcchhh-hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 554332222 121211111111 111 122345699999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=252.56 Aligned_cols=200 Identities=18% Similarity=0.216 Sum_probs=148.0
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
+...+|||++.+++ .+.. .+.+++++|+ .|++|.+++...+ .+++..+..|+.||+.||+|||++||+||||||
T Consensus 51 ~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp 125 (279)
T cd05633 51 VSTGDCPFIVCMTY-AFHT---PDKLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKP 125 (279)
T ss_pred HhhCCCCcEeEEEE-EEec---CCeEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCH
Confidence 44568999998776 3322 2345666666 6899999985544 489999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||++...+...
T Consensus 126 ~Nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------------ 151 (279)
T cd05633 126 ANILLDEHGHVRISDLGLACDFSKKK------------------------------------------------------ 151 (279)
T ss_pred HHEEECCCCCEEEccCCcceeccccC------------------------------------------------------
Confidence 99999999999999999874321100
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHhhC--
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.....|+..|+|||.+.+ ..++.++||||+||++|+|++
T Consensus 152 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 193 (279)
T cd05633 152 --------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH 193 (279)
T ss_pred --------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 000357899999999864 558999999999999999999
Q ss_pred -CCCCChhhH-HHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 268 -PFSTGEEKT-RTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 268 -pf~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||....... ....... ...+..++ ...+...+++.+||..||.+|| |++++++||||+...
T Consensus 194 ~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 194 SPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 554322111 1111111 11112222 2334556999999999999999 699999999999854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=250.26 Aligned_cols=203 Identities=18% Similarity=0.230 Sum_probs=150.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++++++ .+. ....+++++|+ .+++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 55 ~e~~~~~~l~h~~ii~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 129 (267)
T cd06645 55 QEIIMMKDCKHSNIVAYFG-SYL---RRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEE---eCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3556788899999999888 332 22456677777 5889999985544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06645 130 RDIKGANILLTDNGHVKLADFGVSAQITATIA------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEECCCCCEEECcceeeeEccCccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+. ...++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il 199 (267)
T cd06645 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHH
Confidence 000145789999999874 44588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|+|++ ||..................++... .......+++.+||..+|++|||+.++++|||
T Consensus 200 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 200 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99998 5544332222222222222222211 11234558999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=250.17 Aligned_cols=205 Identities=18% Similarity=0.244 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ ++. ....+++++|+.+++|.+++.. ....+++..++.++.||+.||+|||+.|++|
T Consensus 48 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H 123 (284)
T cd07860 48 REISLLKELNHPNIVKLLD-VIH---TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLH 123 (284)
T ss_pred HHHHHHHhcCCCCCcchhh-hcc---cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788999999999888 442 3346788888877899998843 3455899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++...+....
T Consensus 124 ~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (284)
T cd07860 124 RDLKPQNLLINTEGAIKLADFGLARAFGVPVR------------------------------------------------ 155 (284)
T ss_pred CCCCHHHEEECCCCCEEEeeccchhhcccCcc------------------------------------------------
Confidence 99999999999999999999998743321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+.. ++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~ 193 (284)
T cd07860 156 ------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 193 (284)
T ss_pred ------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHH
Confidence 000124678999999987655 6889999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCC-----------------------ch----hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLP-----------------------PQ----LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~-----------------------~~----~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|++ ||....+.............+ .. .....+...++|.+||+.||.+||
T Consensus 194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 273 (284)
T cd07860 194 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI 273 (284)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence 999 555443322222211110000 00 011223445899999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 274 t~~~~l~~~~f 284 (284)
T cd07860 274 SAKAALAHPFF 284 (284)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=252.61 Aligned_cols=203 Identities=24% Similarity=0.352 Sum_probs=152.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++.++.||||+.+++ ++.+ ...+++++++ .+++|.++|. ....+++.++..++.||++||++||++||+|+
T Consensus 48 e~~~~~~l~~~~i~~~~~-~~~~---~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~ 122 (260)
T PF00069_consen 48 EIKILRRLRHPNIVQILD-VFQD---DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHR 122 (260)
T ss_dssp HHHHHHHHTBTTBCHEEE-EEEE---SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred hhhccccccccccccccc-cccc---ccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence 566888899999999877 4433 4456677776 5669999996 33448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...... .
T Consensus 123 dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~--------------- 152 (260)
T PF00069_consen 123 DIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N--------------- 152 (260)
T ss_dssp SBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T---------------
T ss_pred ccccccccccccccccccccccccccccc-----------------------------------c---------------
Confidence 99999999999999999999987432000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-CCCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||++. +..++.++||||||+++|+|
T Consensus 153 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 192 (260)
T PF00069_consen 153 ----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYEL 192 (260)
T ss_dssp ----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccccccccccccccccccccccccccccccccccc
Confidence 0001146789999999998 77799999999999999999
Q ss_pred hC---CCCCCh--hhHHHHHhhcccCCCchhhhc---CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||.... .....+........+...... .+...+++.+||+.||++|||+.++++||||
T Consensus 193 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 193 LTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 99 555441 222222222221111111111 1455699999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=259.79 Aligned_cols=205 Identities=19% Similarity=0.244 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++|+||+++++ ++.... .....++++|+.+++|.+++... ++..++..++.||+.||+|||++||
T Consensus 64 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi 139 (353)
T cd07850 64 RELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGI 139 (353)
T ss_pred HHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4566788899999999888 443222 22467899999888999988433 8899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||+++..+....
T Consensus 140 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------- 173 (353)
T cd07850 140 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---------------------------------------------- 173 (353)
T ss_pred eeCCCCHHHEEECCCCCEEEccCccceeCCCCCC----------------------------------------------
Confidence 9999999999999999999999998843211100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+++.|+|||.+.+..++.++|||||||++|
T Consensus 174 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ 208 (353)
T cd07850 174 ---------------------------------------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 208 (353)
T ss_pred ---------------------------------------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHH
Confidence 00135688999999999988999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-C-------------------------------------CCchh---hhc-Cchh
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-V-------------------------------------LPPQL---LLK-FPKE 298 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-~-------------------------------------~~~~~---~~~-~~~~ 298 (712)
+|++ ||...+... .+..+... . .+... ... .+..
T Consensus 209 ~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (353)
T cd07850 209 EMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQA 287 (353)
T ss_pred HHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHH
Confidence 9998 554432211 11111000 0 00000 001 1234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.++|.+||..||++|||+.|+|+||||..
T Consensus 288 ~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 288 RDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 58999999999999999999999998874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=232.55 Aligned_cols=222 Identities=14% Similarity=0.226 Sum_probs=169.1
Q ss_pred eeeccceeeccCCCCCcccccccccc-cccccC----ceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHh
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCE-NEAAID----PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~----~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
-+.++.-+|..+.|+|++.++. +|. ...... .+++|+.++..+|.-+|.....+++..++..++++++.||.|+
T Consensus 62 talreikiL~~lkHenv~nliE-ic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i 140 (376)
T KOG0669|consen 62 TALREIKILQLLKHENVVNLIE-ICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI 140 (376)
T ss_pred HHHHHHHHHHHhcchhHHHHHH-HHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHH
Confidence 4457777899999999998876 443 222222 4999999999999999977766799999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|...|+|||+||+|+||+.+|.++++|||+++.+...+-.
T Consensus 141 Hr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~---------------------------------------- 180 (376)
T KOG0669|consen 141 HRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV---------------------------------------- 180 (376)
T ss_pred HHhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc----------------------------------------
Confidence 9999999999999999999999999999998654222100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwS 257 (712)
.+.+-+..+-|.||++||.+.|.. |+++.|||.
T Consensus 181 ----------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWg 214 (376)
T KOG0669|consen 181 ----------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWG 214 (376)
T ss_pred ----------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHh
Confidence 000011246699999999998876 999999999
Q ss_pred HHHHHHHhhC--CCCCChhhHHHHHh---hcccCCCch-------------------------hh------hcCchhHHH
Q 005147 258 LGVLLFELFC--PFSTGEEKTRTMSS---LRHRVLPPQ-------------------------LL------LKFPKEASF 301 (712)
Q Consensus 258 lGvll~eLl~--pf~~~~~~~~~~~~---~~~~~~~~~-------------------------~~------~~~~~~~~l 301 (712)
.||++.||++ |............. +.....+.. .. ...+..++|
T Consensus 215 AgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dL 294 (376)
T KOG0669|consen 215 AGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDL 294 (376)
T ss_pred HHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHH
Confidence 9999999999 66655444333332 222111100 00 011245599
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+.++|..||.+|+++.++|+|.||.....+.
T Consensus 295 le~ll~~DP~kR~~ad~alnh~~F~kdp~pq 325 (376)
T KOG0669|consen 295 LEKLLKLDPTKRIDADQALNHDFFWKDPMPQ 325 (376)
T ss_pred HHHHhccCcccCcchHhhhchhhhhcCCcch
Confidence 9999999999999999999999999876653
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-28 Score=254.19 Aligned_cols=207 Identities=15% Similarity=0.177 Sum_probs=155.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+.|+|++.+++ .+.. ...+++++++ .|++|.+++... .+++.++..++.||+.||+|||++||+||
T Consensus 67 e~~~l~~~~h~~v~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~ 140 (296)
T cd06654 67 EILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHR 140 (296)
T ss_pred HHHHHHhCCCCCEeeEEE-EEEe---CCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 445678899999999887 3422 3356777776 689999998543 37899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+........
T Consensus 141 dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 171 (296)
T cd06654 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------- 171 (296)
T ss_pred CCCHHHEEEcCCCCEEECccccchhcccccc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 172 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~ 210 (296)
T cd06654 172 -----------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210 (296)
T ss_pred -----------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+ ||..................+..... ..+...+++.+||..+|.+|||+.++++||||.....
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 211 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred hCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 9 66544332222222222221211222 2344558999999999999999999999999987644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=251.02 Aligned_cols=205 Identities=16% Similarity=0.205 Sum_probs=148.5
Q ss_pred eeeccC-CCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+ +|+|++++++.+..... ....+++++|+ .+++|.+++.. ....+++..++.++.||+.||.|||++||+
T Consensus 64 ~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~iv 143 (282)
T cd06636 64 NMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVI 143 (282)
T ss_pred HHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344554 79999998884332221 23467777777 57799998843 334588888999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||++.......
T Consensus 144 H~dl~~~nili~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 175 (282)
T cd06636 144 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV------------------------------------------------ 175 (282)
T ss_pred cCCCCHHHEEECCCCCEEEeeCcchhhhhccc------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 259 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlG 259 (712)
. ......|+..|+|||.+. +..++.++||||||
T Consensus 176 -------------------------------------~-----~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG 213 (282)
T cd06636 176 -------------------------------------G-----RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213 (282)
T ss_pred -------------------------------------c-----CCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence 0 000145788999999985 34588899999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++|||++ ||........ ...+.....+......+ +...+||.+||+.+|.+|||+.++|+||||
T Consensus 214 ~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 214 ITAIEMAEGAPPLCDMHPMRA-LFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HHHHHHHhCCCCccccCHHhh-hhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99999999 5543332221 12222222222222223 345699999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-28 Score=259.87 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++++++ ++.... ....+++++++.+++|.+++...+ .+++..+..++.||+.||.|||++|++
T Consensus 53 ~E~~~l~~l~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i~ 130 (337)
T cd07858 53 REIKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSANVL 130 (337)
T ss_pred HHHHHHHhcCCCCccchHH-heecccccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4666788899999999887 443222 223578999998899999996544 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++....... .+
T Consensus 131 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------------------------~~------------- 164 (337)
T cd07858 131 HRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------------------------DF------------- 164 (337)
T ss_pred cCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------------------------cc-------------
Confidence 99999999999999999999999874321110 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
.....++.+|+|||.+.. ..++.++|||||||++|
T Consensus 165 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 200 (337)
T cd07858 165 --------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA 200 (337)
T ss_pred --------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence 001356889999998865 45899999999999999
Q ss_pred HhhC---CCCCChhhH--HHHHhhcc------------------------cCCC---chhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKT--RTMSSLRH------------------------RVLP---PQLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~--~~~~~~~~------------------------~~~~---~~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||...+... ........ ...+ .......+...+++.+||..+|+
T Consensus 201 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 280 (337)
T cd07858 201 ELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS 280 (337)
T ss_pred HHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence 9998 443221110 00000000 0000 00112234455999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCch
Q 005147 312 GRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|||+.++|+||||.......
T Consensus 281 ~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 281 KRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hccCHHHHHcCcchhhhcCcc
Confidence 999999999999998765543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-28 Score=248.97 Aligned_cols=206 Identities=19% Similarity=0.225 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..+++.++|||++.+++ .+... ..+++++++ .+++|.+++......+++..+..++.||+.||+|||+ .|++
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~ 123 (265)
T cd06605 48 RELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123 (265)
T ss_pred HHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCee
Confidence 3445678889999999887 34222 557777777 5699999996544568999999999999999999999 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+.......
T Consensus 124 H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 155 (265)
T cd06605 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL------------------------------------------------ 155 (265)
T ss_pred cCCCCHHHEEECCCCCEEEeecccchhhHHHH------------------------------------------------
Confidence 99999999999999999999999873221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 --------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 191 (265)
T cd06605 156 --------------------------------------------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIE 191 (265)
T ss_pred --------------------------------------------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 000346788999999988889999999999999999
Q ss_pred hhC---CCCCC----hhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||... ......+..+.....+..... ..+...++|.+||..+|.+|||+.+++.||||+..
T Consensus 192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 192 LATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 999 55443 122223333333322222222 23455699999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=252.45 Aligned_cols=208 Identities=15% Similarity=0.180 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.+.|||++.+++ .+.. ...+++++++ .|++|.+++... .+++.++..++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H 138 (296)
T cd06655 65 NEILVMKELKNPNIVNFLD-SFLV---GDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIH 138 (296)
T ss_pred HHHHHHHhcCCCceeeeee-eEec---CceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3456678899999999887 4422 3456777776 699999988543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 139 ~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 170 (296)
T cd06655 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 170 (296)
T ss_pred CCCCHHHEEECCCCCEEEccCccchhcccccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~l 208 (296)
T cd06655 171 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208 (296)
T ss_pred ------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..................+.... ...+...+++.+||..+|.+|||+.++++||||.....
T Consensus 209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 209 VEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 99 5654443322222211111111112 22344558999999999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=247.36 Aligned_cols=207 Identities=17% Similarity=0.199 Sum_probs=158.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.+.|+|++.+++ .+.++ ..+++++|+ .+++|.+++... .+++..++.++.||+.||.|||++||+|+
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~ 122 (274)
T cd06609 49 EIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHR 122 (274)
T ss_pred HHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 445678889999999887 44222 456677666 689999999554 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||+++..+....
T Consensus 123 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 153 (274)
T cd06609 123 DIKAANILLSEEGDVKLADFGVSGQLTSTMS------------------------------------------------- 153 (274)
T ss_pred CCCHHHEEECCCCCEEEcccccceeeccccc-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 154 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~ 192 (274)
T cd06609 154 -----------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA 192 (274)
T ss_pred -----------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 001135788999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||...... .....+.....+..... ..+...+++.+||..+|.+|||++++++||||......
T Consensus 193 tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 193 KGEPPLSDLHPM-RVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred hCCCCcccCchH-HHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 9 55433322 22222233322222222 23456699999999999999999999999999987554
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-28 Score=258.23 Aligned_cols=216 Identities=15% Similarity=0.155 Sum_probs=155.0
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+ +||||+++++...........+++++++.+++|.+++... ..+++.+++.++.||+.||.|||++||+||
T Consensus 51 E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~ 129 (332)
T cd07857 51 ELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHR 129 (332)
T ss_pred HHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 44456666 6999999887332222334567889999889999999544 448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||.+..........
T Consensus 130 dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~----------------------------------------------- 162 (332)
T cd07857 130 DLKPGNLLVNADCELKICDFGLARGFSENPGEN----------------------------------------------- 162 (332)
T ss_pred CCCHHHeEEcCCCCEEeCcCCCceecccccccc-----------------------------------------------
Confidence 999999999999999999999885432110000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
........|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 163 ---------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l 203 (332)
T cd07857 163 ---------------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL 203 (332)
T ss_pred ---------------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 000011467999999998765 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--------------------------cCCCch----hhhcCchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--------------------------RVLPPQ----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--------------------------~~~~~~----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
++ ||...... .....+.. ...... .....+...+|+.+||+.+|.+
T Consensus 204 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 282 (332)
T cd07857 204 LGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTK 282 (332)
T ss_pred HhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCccc
Confidence 98 44332211 11110000 000000 1112345569999999999999
Q ss_pred CCCHHHHhcCcCCCCCcCc
Q 005147 313 RPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~~ 331 (712)
|||+.+++.||||....++
T Consensus 283 R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 283 RISVEEALEHPYLAIWHDP 301 (332)
T ss_pred CCCHHHHhcChhhhhhcCc
Confidence 9999999999999866543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=250.73 Aligned_cols=208 Identities=16% Similarity=0.188 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++.+++ .+.. ...+++++++ .+++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 49 ~E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii 124 (285)
T cd05632 49 NEKQILEKVNSQFVVNLAY-AYET---KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124 (285)
T ss_pred HHHHHHHHcCCcCceeEEE-EEec---CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788999999999777 3322 2356677766 68899988843 334599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05632 125 YRDLKPENILLDDYGHIRISDLGLAVKIPEGE------------------------------------------------ 156 (285)
T ss_pred ecCCCHHHEEECCCCCEEEecCCcceecCCCC------------------------------------------------
Confidence 99999999999999999999999873221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 157 -------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~ 193 (285)
T cd05632 157 -------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHH
Confidence 0001357999999999988889999999999999999
Q ss_pred hhC---CCCCChhhHH---HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
|++ ||........ ....+... .+.......+...+|+.+||+.+|++||+ +.++++|+||.....
T Consensus 194 l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 194 MIEGQSPFRGRKEKVKREEVDRRVLET-EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhhhcc-ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 998 6654433211 11111111 11111122344569999999999999999 889999999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=246.97 Aligned_cols=205 Identities=20% Similarity=0.287 Sum_probs=156.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhh----
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH---- 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lH---- 99 (712)
+..+++.+.|+|++++++ .+.. .....+++++|+ .+++|.+++.. ....+++.+++.++.||+.||+|||
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~ 126 (265)
T cd08217 49 EVNILRELKHPNIVRYYD-RIID-RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126 (265)
T ss_pred HHHHHHhcCCCccceeee-eeec-CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 445688899999999887 3322 223456677776 68999999843 2456899999999999999999999
Q ss_pred -hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 100 -SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 100 -s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+.+|+|+||+|+||+++.++.++++|||.+........ +
T Consensus 127 ~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---------------------------------~------- 166 (265)
T cd08217 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS---------------------------------F------- 166 (265)
T ss_pred ccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc---------------------------------c-------
Confidence 99999999999999999999999999998854321100 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.....|++.|+|||.+.+..++.++|+|||
T Consensus 167 --------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~sl 196 (265)
T cd08217 167 --------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSL 196 (265)
T ss_pred --------------------------------------------------ccccccCCCccChhhhcCCCCCchhHHHHH
Confidence 001357889999999988889999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+++|+|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.+|++|||+
T Consensus 197 G~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 197 GCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 999999998 554433 233334444444433333334555699999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=246.61 Aligned_cols=205 Identities=17% Similarity=0.194 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ .+. ....+++++++ .|++|.+++.+.. .+++..+..++.||+.||.|||++|++|+
T Consensus 43 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~h~ 117 (262)
T cd05572 43 EKEILEECNHPFIVKLYR-TFK---DKKYIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYR 117 (262)
T ss_pred HHHHHHhCCCCCEeeeee-eEE---cCCccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence 445678899999999888 442 22456777776 7999999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+.......
T Consensus 118 dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------------------------------------------------- 147 (262)
T cd05572 118 DLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------------------------------------------------- 147 (262)
T ss_pred CCCHHHEEEcCCCCEEEeeCCcccccCccc--------------------------------------------------
Confidence 999999999999999999999874321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|++||.+.+..++.++|+|||||++|+|+
T Consensus 148 -----------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~ 186 (262)
T cd05572 148 -----------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186 (262)
T ss_pred -----------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence 000135688999999998888999999999999999999
Q ss_pred C---CCCCChh-hHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 267 C---PFSTGEE-KTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
+ ||..... ....+..+.. ...+.......+...+++.+||..+|.+||+ +.|+++||||+..
T Consensus 187 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 187 TGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred hCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 8 5654431 2233333332 1111211222455669999999999999999 9999999999865
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=246.85 Aligned_cols=209 Identities=18% Similarity=0.147 Sum_probs=152.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+.+++ .+.+. ....+++++|+ .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H 129 (265)
T cd06652 53 CEIQLLKNLLHERIVQYYG-CLRDP-MERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNMIVH 129 (265)
T ss_pred HHHHHHHhcCCCCeeeEEe-EeccC-CCceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3456788899999999887 33222 23456677777 5899999995543 3889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+......... .
T Consensus 130 ~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~--------------------------------~-------------- 163 (265)
T cd06652 130 RDIKGANILRDSVGNVKLGDFGASKRLQTICLS--------------------------------G-------------- 163 (265)
T ss_pred CCCCHHHEEecCCCCEEECcCcccccccccccc--------------------------------c--------------
Confidence 999999999999999999999987432110000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 164 ---------------------------------~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 202 (265)
T cd06652 164 ---------------------------------T--------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202 (265)
T ss_pred ---------------------------------c--------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHH
Confidence 0 00013478899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++ ||..................+...........+++.+|+. +|++||+++++++|||++
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 203 LTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 98 5543332322222222222222222223345589999984 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=251.21 Aligned_cols=210 Identities=18% Similarity=0.262 Sum_probs=155.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..+++.++|+|++++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+|+|
T Consensus 52 e~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d 127 (298)
T cd07841 52 EIKLLQELKHPNIIGLLD-VFGH---KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRD 127 (298)
T ss_pred HHHHHhhcCCCCChhhhh-eeec---CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 455788899999999888 4433 346778888879999999965544689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||++...+....
T Consensus 128 l~p~nill~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 157 (298)
T cd07841 128 LKPNNLLIASDGVLKLADFGLARSFGSPNR-------------------------------------------------- 157 (298)
T ss_pred CChhhEEEcCCCCEEEccceeeeeccCCCc--------------------------------------------------
Confidence 999999999999999999998854322100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+. .++.++|||||||++|||+
T Consensus 158 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~ 197 (298)
T cd07841 158 ----------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELL 197 (298)
T ss_pred ----------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 00002457889999988653 4789999999999999999
Q ss_pred C--CCCCChhhHHHHHhhcccC----------------------CCch-----hhhcCchhHHHHHHcCCCCCCCCCCHH
Q 005147 267 C--PFSTGEEKTRTMSSLRHRV----------------------LPPQ-----LLLKFPKEASFCLWLLHPEPSGRPKMG 317 (712)
Q Consensus 267 ~--pf~~~~~~~~~~~~~~~~~----------------------~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (712)
+ |++...........+.... .++. +........+|+.+||..+|.+|||+.
T Consensus 198 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 277 (298)
T cd07841 198 LRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITAR 277 (298)
T ss_pred cCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHH
Confidence 8 3322222211111111000 0000 011123445899999999999999999
Q ss_pred HHhcCcCCCCCcCc
Q 005147 318 ELLQSEFLNEPRDS 331 (712)
Q Consensus 318 eiL~hp~~~~~~~~ 331 (712)
++|+||||.+...+
T Consensus 278 e~l~~~~~~~~~~~ 291 (298)
T cd07841 278 QALEHPYFSNDPAP 291 (298)
T ss_pred HHhhCccccCCCCC
Confidence 99999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=248.24 Aligned_cols=210 Identities=18% Similarity=0.231 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+.+++ .|.+. ....+++++|+ .|++|.+++. .....+++..+..++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~h~~iv~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~ 125 (287)
T cd06621 48 RELEINKSCKSPYIVKYYG-AFLDE-SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125 (287)
T ss_pred HHHHHHHhCCCCCeeeeee-EEEcc-CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4455788899999999887 44332 23456777776 5899998763 23445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||++.......
T Consensus 126 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 159 (287)
T cd06621 126 IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL---------------------------------------------- 159 (287)
T ss_pred cccCCCCHHHEEEecCCeEEEeeccccccccccc----------------------------------------------
Confidence 9999999999999999999999999873321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....++..|+|||.+.+..++.++|||||||++
T Consensus 160 ----------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (287)
T cd06621 160 ----------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTL 193 (287)
T ss_pred ----------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 0003457889999999888899999999999999
Q ss_pred HHhhC---CCCCCh----hhHHHHHhhcccCCCchhhh------cC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL------KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~----~~~~~~~~~~~~~~~~~~~~------~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||.... ........+.... ++.+.. .+ +...+|+.+||..+|.+|||+.|+++||||...
T Consensus 194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 194 LEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-NPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred HHHHhCCCCCCcccCCCCChHHHHHHHhcCC-chhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 99999 454331 1122222222211 111111 11 244599999999999999999999999999766
Q ss_pred cCc
Q 005147 329 RDS 331 (712)
Q Consensus 329 ~~~ 331 (712)
..+
T Consensus 273 ~~~ 275 (287)
T cd06621 273 MKK 275 (287)
T ss_pred ccc
Confidence 553
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=255.45 Aligned_cols=202 Identities=18% Similarity=0.257 Sum_probs=149.9
Q ss_pred eeeccCCC-CCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.++..++| ++++.+++ ++.. .+.+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|||
T Consensus 52 ~~l~~~~~~~~i~~~~~-~~~~---~~~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrD 126 (323)
T cd05615 52 RVLALQDKPPFLTQLHS-CFQT---VDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRD 126 (323)
T ss_pred HHHHhccCCCchhheee-EEec---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 34555655 55556555 4422 2457777777 5899999985544 499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||+++.......
T Consensus 127 ikp~Nill~~~~~ikL~Dfg~~~~~~~~~~-------------------------------------------------- 156 (323)
T cd05615 127 LKLDNVMLDSEGHIKIADFGMCKEHMVDGV-------------------------------------------------- 156 (323)
T ss_pred CCHHHeEECCCCCEEEeccccccccCCCCc--------------------------------------------------
Confidence 999999999999999999998743211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 196 (323)
T cd05615 157 ----------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 196 (323)
T ss_pred ----------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh
Confidence 0001458999999999998889999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
||...... .....+...... ......+...+++.+||..+|.+|++ .+++++||||...
T Consensus 197 G~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 197 GQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 66544332 223333222111 11122345569999999999999997 5789999999865
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=251.85 Aligned_cols=212 Identities=17% Similarity=0.256 Sum_probs=153.7
Q ss_pred ccceeeccCCCCCccccccccccccc-----ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~-----~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.+.||||+++++ ++.... ....+++++|+.+++|.+++......+++.+++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 138 (310)
T cd07865 60 REIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN 138 (310)
T ss_pred HHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4556788999999999887 443322 1246789999988899998866555689999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++++|||.+......... .
T Consensus 139 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 176 (310)
T cd07865 139 KILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K---------- 176 (310)
T ss_pred CeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C----------
Confidence 9999999999999999999999999988543211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGv 260 (712)
+.......++..|+|||.+.+.. ++.++|||||||
T Consensus 177 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 212 (310)
T cd07865 177 --------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC 212 (310)
T ss_pred --------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence 00000135688999999886654 789999999999
Q ss_pred HHHHhhC---CCCCChhhH--HHHHhhcccCC------------------Cch--------hh--hcCchhHHHHHHcCC
Q 005147 261 LLFELFC---PFSTGEEKT--RTMSSLRHRVL------------------PPQ--------LL--LKFPKEASFCLWLLH 307 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~--~~~~~~~~~~~------------------~~~--------~~--~~~~~~~~li~~~L~ 307 (712)
++|||++ ||....... .....+..... +.. +. ...+...+||.+||.
T Consensus 213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~ 292 (310)
T cd07865 213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV 292 (310)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence 9999998 443332211 11111111100 000 00 012344589999999
Q ss_pred CCCCCCCCHHHHhcCcCC
Q 005147 308 PEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~ 325 (712)
.+|.+|||++++|+||||
T Consensus 293 ~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 293 LDPAKRIDADTALNHDFF 310 (310)
T ss_pred CChhhccCHHHHhcCCCC
Confidence 999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=248.88 Aligned_cols=207 Identities=19% Similarity=0.235 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ .+.. ...+++++|+ .+++|.+++.+....+++.+++.++.||+.||.|||++||+|+
T Consensus 52 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~ 127 (280)
T cd06611 52 EIDILSECKHPNIVGLYE-AYFY---ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127 (280)
T ss_pred HHHHHHhCCCCceeEEEE-EEec---CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 445788899999999888 4322 3356777776 6889999986655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.......
T Consensus 128 dl~p~nili~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 157 (280)
T cd06611 128 DLKAGNILLTLDGDVKLADFGVSAKNKSTL-------------------------------------------------- 157 (280)
T ss_pred CCChhhEEECCCCCEEEccCccchhhcccc--------------------------------------------------
Confidence 999999999999999999999763221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
.......|++.|+|||.+. +..++.++|||||||+
T Consensus 158 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~i 197 (280)
T cd06611 158 ----------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGIT 197 (280)
T ss_pred ----------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHH
Confidence 0001145788999999974 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCch-hh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||..... ...+..+.....+.. .. .......+++.+||..+|.+||++.++|+||||....
T Consensus 198 l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 198 LIELAQMEPPHHELNP-MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred HHHHHhCCCCcccCCH-HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 999999 5543322 223333333222211 11 1234556999999999999999999999999998763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=249.90 Aligned_cols=206 Identities=14% Similarity=0.125 Sum_probs=149.0
Q ss_pred eeeccC-CCCCccccccccccccc-ccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~-~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+ +|||++.+++.+...+. ....+++++|+ .|++|.++++. ....+++..++.++.||+.||+|||+.||
T Consensus 70 ~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 149 (291)
T cd06639 70 NILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI 149 (291)
T ss_pred HHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 345555 89999998883332221 22456777776 68999998842 34458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+|+||||+||+++.++.++++|||++........
T Consensus 150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 183 (291)
T cd06639 150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------- 183 (291)
T ss_pred eccCCCHHHEEEcCCCCEEEeecccchhcccccc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-----CCCccchHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRL 258 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-----~~~~sDIwSl 258 (712)
......|+..|+|||.+.... ++.++|||||
T Consensus 184 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 219 (291)
T cd06639 184 --------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL 219 (291)
T ss_pred --------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence 000135688899999985432 6899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-hhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
||++|||++ ||.......... .+.....+. ... .......+++.+||+.+|++||++.++++||||+
T Consensus 220 Gvi~~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 220 GITAIELGDGDPPLFDMHPVKTLF-KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhhCCCCCCCCcHHHHHH-HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 999999998 554433322222 222222111 111 1223455899999999999999999999999985
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=245.78 Aligned_cols=204 Identities=20% Similarity=0.253 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++++++|+||+++++ ++.+ ...+++++|+ .|++|.+++.+. ...+++.++..++.|++.+|.|||+.|++
T Consensus 48 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08221 48 NEIVILSLLQHPNIIAYYN-HFMD---DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGIL 123 (256)
T ss_pred HHHHHHHhCCCCCeeEEEe-EEec---CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556889999999999888 4422 2456666666 689999999543 45589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.+|++|||.+........
T Consensus 124 h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08221 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS----------------------------------------------- 156 (256)
T ss_pred ccCCChHhEEEeCCCCEEECcCcceEEcccccc-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~ 193 (256)
T cd08221 157 -------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYE 193 (256)
T ss_pred -------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHH
Confidence 0001457899999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||.... .......+....+++..........+++.+||..+|.+||++.++|+|+|+
T Consensus 194 l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 194 LLTLKRTFDATN-PLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHCCCCCCCCC-HHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 998 554332 233333444444443333334556699999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-28 Score=254.25 Aligned_cols=208 Identities=15% Similarity=0.189 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+|++.+++ .+.. ...+++++|+ .|++|.+++.+. .+++.+++.++.|++.||.|||+.||+|
T Consensus 65 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H 138 (297)
T cd06656 65 NEILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIH 138 (297)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec---CCEEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999887 4422 2356667766 699999998543 3789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 139 ~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------------ 170 (297)
T cd06656 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 170 (297)
T ss_pred CCCCHHHEEECCCCCEEECcCccceEccCCcc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l 208 (297)
T cd06656 171 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208 (297)
T ss_pred ------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..................+....... +...+|+.+||..+|.+||++.++++||||...+.
T Consensus 209 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 209 VEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 99 5544333222221111121111122222 34458999999999999999999999999987655
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=249.15 Aligned_cols=207 Identities=19% Similarity=0.322 Sum_probs=157.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++.+++ .+.. ....++++++ .|++|.+++.. ..+++.+++.++.||+.||+|||++||+||
T Consensus 66 e~~~l~~~~h~~vv~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 139 (285)
T cd06648 66 EVVIMRDYQHPNIVEMYS-SYLV---GDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHR 139 (285)
T ss_pred HHHHHHHcCCCChheEEE-EEEc---CCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 455688899999999888 3322 2345666665 69999999965 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+.......
T Consensus 140 dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 169 (285)
T cd06648 140 DIKSDSILLTSDGRVKLSDFGFCAQVSKEV-------------------------------------------------- 169 (285)
T ss_pred CCChhhEEEcCCCcEEEcccccchhhccCC--------------------------------------------------
Confidence 999999999999999999999763221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+ ......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 170 ---------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 209 (285)
T cd06648 170 ---------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV 209 (285)
T ss_pred ---------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence 0 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||.... ....+..+.....+.. .....+...+|+.+||..+|.+|||+.++++||||.....+
T Consensus 210 ~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 210 DGEPPYFNEP-PLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred hCCCCCcCCC-HHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 9 554433 2333444443322211 11123456699999999999999999999999999887653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=252.12 Aligned_cols=208 Identities=18% Similarity=0.279 Sum_probs=156.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..++|+|++.+++ .+.. ...+++++|+ .+++|.+++... .+++.+++.++.||+.||+|||++||+|
T Consensus 68 ~e~~~l~~l~h~~ii~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH 141 (292)
T cd06658 68 NEVVIMRDYHHENVVDMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIH 141 (292)
T ss_pred HHHHHHHhCCCCcHHHHHH-heec---CCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999888 3322 2456777776 588999988443 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++........
T Consensus 142 ~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 173 (292)
T cd06658 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------------------------------------------------ 173 (292)
T ss_pred cCCCHHHEEEcCCCCEEEccCcchhhcccccc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el 211 (292)
T cd06658 174 ------------------------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 211 (292)
T ss_pred ------------------------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||...... ..+..+.....+. ..........+++.+||..+|.+|||+.++++||||.....+
T Consensus 212 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 212 IDGEPPYFNEPPL-QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 99 55543322 2233332221111 111223445589999999999999999999999999976554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=248.98 Aligned_cols=204 Identities=17% Similarity=0.204 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..++|||++.+++ ++.+ ....++++|+..++|.+++......+++.+++.++.||+.||.|||++||+|+
T Consensus 70 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~ 145 (313)
T cd06633 70 KEVKFLQQLKHPNTIEYKG-CYLK---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 145 (313)
T ss_pred HHHHHHHhCCCCCCccEEE-EEEe---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3455788899999999887 4433 24578888888788998886555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 146 dl~p~nili~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 174 (313)
T cd06633 146 DIKAGNILLTEPGQVKLADFGSASKSSPA--------------------------------------------------- 174 (313)
T ss_pred CCChhhEEECCCCCEEEeecCCCcccCCC---------------------------------------------------
Confidence 99999999999999999999976321000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....|+..|+|||.+. ...++.++|||||||++|
T Consensus 175 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~ 211 (313)
T cd06633 175 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 211 (313)
T ss_pred -------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHH
Confidence 0135788899999984 355889999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|++ ||........... +.....+......++ ...+|+.+||+.+|.+||++.+++.||||....
T Consensus 212 el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 212 ELAERKPPLFNMNAMSALYH-IAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHhCCCCCCCCChHHHHHH-HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9998 5554433332222 222222322222233 456999999999999999999999999999754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=259.53 Aligned_cols=207 Identities=21% Similarity=0.213 Sum_probs=165.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++.-++..++|||||++|. +++ ....+|+|||| .|+.|.++|.+.++ +.+.+++.+|.|++.||+|||+++|||
T Consensus 104 rev~imk~l~HPnIvkl~~-v~~---t~~~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~ivH 178 (596)
T KOG0586|consen 104 REVDIMKSLNHPNIVKLFS-VIE---TEATLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIVH 178 (596)
T ss_pred HHHHHHHhcCCcceeeeee-eee---ecceeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcceec
Confidence 6777899999999999888 553 34578889998 59999999977776 667999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||.+||||+.+-.+||+|||++..+....+
T Consensus 179 rdLk~eNilL~~~mnikIaDfgfS~~~~~~~~------------------------------------------------ 210 (596)
T KOG0586|consen 179 RDLKAENILLDENMNIKIADFGFSTFFDYGLM------------------------------------------------ 210 (596)
T ss_pred cccchhhcccccccceeeeccccceeeccccc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.-..+|++.|+|||++.+..| ++.+|+||||++||-
T Consensus 211 -------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 211 -------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred -------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence 011689999999999999886 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|++ ||....-....-..++....-+.+ ...+..++|.++|.++|.+|++.+++..|.|++.....
T Consensus 248 LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 248 LVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 998 787544332222233332222222 23455689999999999999999999999999876543
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=250.09 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|||++++++ ++.+ ....++++|+..++|.+++......+++.++..++.||+.||.|||++||+|+
T Consensus 64 ~Ei~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~ 139 (307)
T cd06607 64 KEVRFLQQLRHPNTIEYKG-CYLR---EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHR 139 (307)
T ss_pred HHHHHHHhCCCCCEEEEEE-EEEe---CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 3455788899999999887 5432 34578888888788988885444558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 140 dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 168 (307)
T cd06607 140 DIKAGNILLTEPGTVKLADFGSASLVSPA--------------------------------------------------- 168 (307)
T ss_pred CCCcccEEECCCCCEEEeecCcceecCCC---------------------------------------------------
Confidence 99999999999999999999987321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....+++.|+|||.+. ...++.++|||||||++|
T Consensus 169 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~ 205 (307)
T cd06607 169 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (307)
T ss_pred -------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHH
Confidence 0034678899999884 345889999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||.......... .+.....+......+ ....+++.+||..+|.+||++.+++.||||.....
T Consensus 206 el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 206 ELAERKPPLFNMNAMSALY-HIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred HHHcCCCCCCCccHHHHHH-HHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 9999 454433322222 222222222222222 34459999999999999999999999999987653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=258.04 Aligned_cols=207 Identities=15% Similarity=0.211 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+.+++ .+.+ ...++++||| .|++|.+++.+....+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~l~~-~~~~---~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHr 126 (331)
T cd05624 51 ERNVLVNGDCQWITTLHY-AFQD---ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHR 126 (331)
T ss_pred HHHHHHhCCCCCEeeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 345677789999999887 4432 3456777777 6999999996644568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++.........
T Consensus 127 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------------ 158 (331)
T cd05624 127 DIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV------------------------------------------------ 158 (331)
T ss_pred cCchHHEEEcCCCCEEEEeccceeeccCCCce------------------------------------------------
Confidence 99999999999999999999988443211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||++.+ ..++.++|||||||+
T Consensus 159 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi 197 (331)
T cd05624 159 -----------------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 197 (331)
T ss_pred -----------------------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh
Confidence 0001468999999999875 458899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
+|||++ ||...... .....+... .+|...........+++.+||..++.+ |++++++++||||...
T Consensus 198 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 198 MYEMLYGETPFYAESLV-ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhCCCCccCCCHH-HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 999999 66544332 222222221 123333333455669999999876654 5689999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=248.36 Aligned_cols=208 Identities=19% Similarity=0.243 Sum_probs=160.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|...+-+-||.+-+ +|+ .-+.+|+|+.+ .||+|.-.|-+ ..+.+++..++.++.+|+.||++||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-Afe---Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFE---TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eec---CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 4556788888888888666 552 34578888887 69999988833 345699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
.|||||+|||++..|+|+|.|.|++.++...+
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
|. ...+||..|||||++.+..|+++.|.|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc--cCCCchhhhcCc-hhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~~ 330 (712)
|+. ||....+...- ..+.+ ...+..+...++ +..+++..+|..||++|. +++++.+||||+....
T Consensus 379 mi~G~sPFr~~KeKvk~-eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKVKR-EEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhhhH-HHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 66543332111 11111 112333444444 444999999999999997 5789999999998644
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=271.97 Aligned_cols=210 Identities=20% Similarity=0.276 Sum_probs=151.4
Q ss_pred ccceeeccC-CCCCcccccccccccc--cc-cCceEEEEeeC-CccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENE--AA-IDPFVHAIEWG-DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~--~~-~~~~~l~~e~~-g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+|+-+++.+ +|+|||.+++..+... .+ ...++|.|||| |++|-++|.+ -...|++.++++||.|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 444567775 5999999988333222 22 35788888887 5899999943 23349999999999999999999999
Q ss_pred cC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 101 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 101 ~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+. |||||||-+||||+.+|+.||||||.+.-.-... . ..+++
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~---------------~--~~~e~------------------- 206 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP---------------T--SAQEV------------------- 206 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCC---------------c--cHHHH-------------------
Confidence 87 9999999999999999999999999884210000 0 00000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccch
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 255 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sDI 255 (712)
..... .+...-|+.|+|||++ .+.+++.++||
T Consensus 207 -----------------------------------~~ve~----------eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 207 -----------------------------------NYVEE----------EIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred -----------------------------------HHHHH----------HHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 00000 1113349999999987 56779999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|+|||+||-|+. ||...... .+.+..+. |.+...+....+||..||+.+|.+||++.+++.+
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 999999999986 88654221 22232221 2223445566699999999999999999999874
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=249.58 Aligned_cols=206 Identities=18% Similarity=0.220 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+.+++ ++.. .....+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+|+
T Consensus 53 ~e~~~l~~l~h~ni~~~~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 130 (293)
T cd07843 53 REINILLKLQHPNIVTVKE-VVVG-SNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130 (293)
T ss_pred HHHHHHHhcCCCCEEEEEE-EEEe-cCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3556788899999999887 3322 2236788899988789999985544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++...+....
T Consensus 131 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 161 (293)
T cd07843 131 DLKTSNLLLNNRGILKICDFGLAREYGSPLK------------------------------------------------- 161 (293)
T ss_pred cCCHHHEEECCCCcEEEeecCceeeccCCcc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+.. ++.++|||||||++|+|
T Consensus 162 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 200 (293)
T cd07843 162 -----------------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAEL 200 (293)
T ss_pred -----------------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHH
Confidence 000134678899999987654 68999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---------------------c----CCC----chhhhc--CchhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---------------------R----VLP----PQLLLK--FPKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---------------------~----~~~----~~~~~~--~~~~~~li~~~L~~dP~ 311 (712)
++ ||...... .....+.. . ... ..+... .+...++|.+||+.+|+
T Consensus 201 ~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 201 LTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 99 44332221 11111100 0 000 011111 23345899999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=246.63 Aligned_cols=205 Identities=19% Similarity=0.196 Sum_probs=153.4
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-Cceec
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 106 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHr 106 (712)
.++..+|||++++++ .+.. ...+++++|+.+++|.+++.. ....+++..++.++.||+.||+|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFR---EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEec---CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 356789999999888 4422 345788899988889887732 334589999999999999999999997 99999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999999874321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC----CCCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+.+ ..++.++|+|||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001346888999998865 3478999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||..................+......+ ....+|+.+||..+|.+|||+.++++||||.....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 99999 5543322223333333322222222223 34559999999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=248.35 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+.+++ .+. ....+++++|+. |++|.+++.+. ..+++..+..++.||+.||.|||++||+|+
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~ 125 (290)
T cd05580 51 EKRILQSIRHPFLVNLYG-SFQ---DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYR 125 (290)
T ss_pred HHHHHHhCCCCCccceee-EEE---cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 445688899999999888 432 234567777775 99999999555 358999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 126 dl~p~nili~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 154 (290)
T cd05580 126 DLKPENLLLDSDGYIKITDFGFAKRVKGR--------------------------------------------------- 154 (290)
T ss_pred CCCHHHEEECCCCCEEEeeCCCccccCCC---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....|++.|+|||.+.+..++.++||||||+++|+|+
T Consensus 155 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 192 (290)
T cd05580 155 ------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEML 192 (290)
T ss_pred ------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHH
Confidence 00135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||..... ......+..... +......+...+++.+||..+|.+|| +++++++||||....
T Consensus 193 ~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 193 AGYPPFFDDNP-IQIYEKILEGKV-RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred hCCCCCCCCCH-HHHHHHHhcCCc-cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 9 5544332 222333322221 11112235556999999999999999 899999999997754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=245.75 Aligned_cols=205 Identities=19% Similarity=0.195 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCC--ChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l--~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.+.|+||+++++ ++.. ...+++++|+ .+++|.+++......+ ++..++.++.||+.||.|||++||
T Consensus 54 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (268)
T cd06624 54 EEIALHSYLKHRNIVQYLG-SDSE---NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129 (268)
T ss_pred HHHHHHHhcCCCCeeeeee-eecc---CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3445678899999999887 4422 2456677766 6899999996543335 888999999999999999999999
Q ss_pred eeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+||||||+||+++. .+.++++|||.+........
T Consensus 130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 164 (268)
T cd06624 130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--------------------------------------------- 164 (268)
T ss_pred eecCCCHHHEEEcCCCCeEEEecchhheecccCCC---------------------------------------------
Confidence 99999999999975 67899999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGv 260 (712)
......|++.|+|||.+.+.. ++.++|||||||
T Consensus 165 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGv 199 (268)
T cd06624 165 ---------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199 (268)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHH
Confidence 000034688999999986654 789999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++|+|++ ||.........+.... ....+.......+...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 vl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 200 TIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999998 5543222212221111 111221111223455699999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=252.74 Aligned_cols=210 Identities=19% Similarity=0.203 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++|||++++++ ++.+ .....+++++|+.+++|.+++.. ....+++..++.|+.||+.||+|||++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 128 (316)
T cd07842 51 REIALLRELKHENVVSLVE-VFLE-HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW 128 (316)
T ss_pred HHHHHHHhcCCCCccceEE-EEeC-CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3556788999999999888 4433 33457899999988889887732 2235899999999999999999999999
Q ss_pred ceeccCCCCceeecC----CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 103 IVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 103 IvHrDLkP~NIll~~----~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|+||||||+||+++. .+.+|++|||++.........
T Consensus 129 i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------- 168 (316)
T cd07842 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP---------------------------------------- 168 (316)
T ss_pred EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc----------------------------------------
Confidence 999999999999998 899999999988543211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwS 257 (712)
........++.+|+|||.+.+. .++.++||||
T Consensus 169 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s 201 (316)
T cd07842 169 -----------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWA 201 (316)
T ss_pred -----------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHH
Confidence 0000113578899999988765 4899999999
Q ss_pred HHHHHHHhhC---CCCCChhhH--------HHHHhh----------------------------cccCCC-chhh-----
Q 005147 258 LGVLLFELFC---PFSTGEEKT--------RTMSSL----------------------------RHRVLP-PQLL----- 292 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~--------~~~~~~----------------------------~~~~~~-~~~~----- 292 (712)
|||++|+|++ ||....... ..+..+ ....++ ....
T Consensus 202 lG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (316)
T cd07842 202 IGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEK 281 (316)
T ss_pred HHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHh
Confidence 9999999998 454322111 000000 000011 0000
Q ss_pred --hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 293 --LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 293 --~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
...+...+++.+||+.||++|||+.++++||||
T Consensus 282 ~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 282 HKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred ccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345589999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=245.87 Aligned_cols=205 Identities=18% Similarity=0.183 Sum_probs=152.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++|||++.+++ .+.. ...+++++|+ .+++|..+. .+++..+..++.||+.||+|||+.||+|+
T Consensus 49 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 119 (279)
T cd06619 49 ELEILYKCDSPYIIGFYG-AFFV---ENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHR 119 (279)
T ss_pred HHHHHHhCCCCCeeeEEE-EEEE---CCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeC
Confidence 445688899999999888 4432 2345677776 588886542 37888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++......
T Consensus 120 dlkp~Nill~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 148 (279)
T cd06619 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVNS--------------------------------------------------- 148 (279)
T ss_pred CCCHHHEEECCCCCEEEeeCCcceecccc---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 149 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 149 -----------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred -----------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHH
Confidence 000146789999999999888999999999999999999
Q ss_pred C---CCCCChhh------HHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 267 C---PFSTGEEK------TRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 267 ~---pf~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+ ||...... ......+.....+.... ...+...+|+.+||+.+|.+||+++++++||||........
T Consensus 188 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 188 LGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred hCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 8 55321110 11111111111111111 12345669999999999999999999999999987755433
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=249.55 Aligned_cols=205 Identities=16% Similarity=0.274 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|+||+++++ ++. ....+++++|+.+++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~ 127 (291)
T cd07844 52 REASLLKDLKHANIVTLHD-IIH---TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHR 127 (291)
T ss_pred HHHHHHhhCCCcceeeEEE-EEe---cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 4666788999999999887 443 335788899998789999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++.......
T Consensus 128 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 158 (291)
T cd07844 128 DLKPQNLLISERGELKLADFGLARAKSVPSK------------------------------------------------- 158 (291)
T ss_pred cCCHHHEEEcCCCCEEECccccccccCCCCc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l 197 (291)
T cd07844 159 -----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEM 197 (291)
T ss_pred -----------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHH
Confidence 00002357789999998764 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---c---------------------CC-Cchhh----hcC--chhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---R---------------------VL-PPQLL----LKF--PKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~---------------------~~-~~~~~----~~~--~~~~~li~~~L~~dP~ 311 (712)
++ ||............+.. . .. +.... ... +...+++.+||+.+|.
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~ 277 (291)
T cd07844 198 ATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPK 277 (291)
T ss_pred HhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcc
Confidence 98 45433211111111100 0 00 00000 111 4445999999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.++|+||||
T Consensus 278 ~Rps~~e~l~~~~f 291 (291)
T cd07844 278 KRISAAEAMKHPYF 291 (291)
T ss_pred cccCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=255.72 Aligned_cols=209 Identities=15% Similarity=0.234 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.+..+|..++||||+++++ ++...... ..+++++++.|++|.+++.. ..+++..++.++.||+.||+|||+.||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi 139 (343)
T cd07880 63 RELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGI 139 (343)
T ss_pred HHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4556788999999999888 45433222 35688999999999998854 348999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++......
T Consensus 140 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07880 140 IHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccccccccC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++++|+|||.+.+. .++.++|+|||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll 206 (343)
T cd07880 172 ---------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 0013468899999998763 488999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC-------------------------CCchh----hhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV-------------------------LPPQL----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~-------------------------~~~~~----~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||................. .+..+ ....+...++|.+||..||
T Consensus 207 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP 286 (343)
T cd07880 207 AEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDA 286 (343)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCCh
Confidence 99998 5543332211111111000 00000 1123345599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.+++.||||......
T Consensus 287 ~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 287 ESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred hhCCCHHHHhcCccHhhhcCc
Confidence 999999999999999876553
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=247.92 Aligned_cols=205 Identities=18% Similarity=0.259 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+||+.+++ ++. .....++++++.+++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 52 ~e~~~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 127 (291)
T cd07870 52 REASLLKGLKHANIVLLHD-IIH---TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHR 127 (291)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEe---cCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4556788899999999877 442 234678888887888988885444457888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++.......
T Consensus 128 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------------- 158 (291)
T cd07870 128 DLKPQNLLISYLGELKLADFGLARAKSIPSQ------------------------------------------------- 158 (291)
T ss_pred CCChHHEEEcCCCcEEEeccccccccCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+. .++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l 197 (291)
T cd07870 159 -----------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197 (291)
T ss_pred -----------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHH
Confidence 00003468899999998764 478899999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-------------------------cCCCchh------hhcCchhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-------------------------RVLPPQL------LLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-------------------------~~~~~~~------~~~~~~~~~li~~~L~~dP~ 311 (712)
++ ||............... ...+... ....+...+++.+||..||+
T Consensus 198 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~ 277 (291)
T cd07870 198 LQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPK 277 (291)
T ss_pred HhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcc
Confidence 99 55433322222111100 0000000 01123455899999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.+++.||||
T Consensus 278 ~R~t~~~~l~h~~~ 291 (291)
T cd07870 278 DRISAQDALLHPYF 291 (291)
T ss_pred cCcCHHHHhcCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-27 Score=247.56 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|+|++++++ ++.. ...+++++|+..++|.+++......+++.+++.++.||+.||.|||++|++||
T Consensus 64 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~ 139 (308)
T cd06634 64 KEVRFLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139 (308)
T ss_pred HHHHHHHhCCCCCcccEEE-EEEc---CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3455788899999999887 4432 34677888887788988885545568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 140 dl~p~nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 168 (308)
T cd06634 140 DVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------------------------------- 168 (308)
T ss_pred CCCHHhEEECCCCcEEECCcccceeecCc---------------------------------------------------
Confidence 99999999999999999999977321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....|+..|+|||.+. ...++.++|||||||++|
T Consensus 169 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 205 (308)
T cd06634 169 -------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (308)
T ss_pred -------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHH
Confidence 0134688899999974 345888999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|++ ||.......... .+.....+....... ....+||.+||..+|.+||++.++++|||+.....+.
T Consensus 206 el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~ 277 (308)
T cd06634 206 ELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277 (308)
T ss_pred HHHcCCCCCccccHHHHHH-HHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChh
Confidence 9998 554433222222 222222222222223 3455999999999999999999999999999865543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=249.69 Aligned_cols=207 Identities=18% Similarity=0.290 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++|||++.+++ .+.. ...+++++|+ .+++|..++.. ..+++..++.++.||+.||.|||++||+|
T Consensus 67 ~e~~~l~~l~hp~i~~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH 140 (297)
T cd06659 67 NEVVIMRDYQHQNVVEMYK-SYLV---GEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIH 140 (297)
T ss_pred HHHHHHHhCCCCchhhhhh-heee---CCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3456788899999999888 4422 2345666665 68899997744 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 141 ~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 172 (297)
T cd06659 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------------------------------------------------ 172 (297)
T ss_pred CCCCHHHeEEccCCcEEEeechhHhhcccccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 210 (297)
T cd06659 173 ------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEM 210 (297)
T ss_pred ------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00014578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC--chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... ..+..+.....+ .......+...+++.+||..+|.+||++.++++||||.....
T Consensus 211 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 211 VDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 98 55443322 233333222111 111122344569999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=244.86 Aligned_cols=194 Identities=21% Similarity=0.270 Sum_probs=147.8
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+|||++++++ .+.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||+.||+||||||+||
T Consensus 66 ~~h~~iv~~~~-~~~~---~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ni 140 (267)
T PHA03390 66 KDNPNFIKLYY-SVTT---LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENV 140 (267)
T ss_pred hcCCCEEEEEE-EEec---CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 37999999887 4322 2357777777 6899999995544 599999999999999999999999999999999999
Q ss_pred eecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 114 VMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 114 ll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
+++.++ .++++|||.+...+..
T Consensus 141 l~~~~~~~~~l~dfg~~~~~~~~--------------------------------------------------------- 163 (267)
T PHA03390 141 LYDRAKDRIYLCDYGLCKIIGTP--------------------------------------------------------- 163 (267)
T ss_pred EEeCCCCeEEEecCccceecCCC---------------------------------------------------------
Confidence 999888 9999999987432111
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
....|+..|+|||.+.+..++.++|||||||++|+|++ ||
T Consensus 164 -------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~ 206 (267)
T PHA03390 164 -------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPF 206 (267)
T ss_pred -------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 00246888999999998889999999999999999998 66
Q ss_pred CCChhhHHHHHhhcc--cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCC
Q 005147 270 STGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 327 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~ 327 (712)
............+.. ....+......+...+||.+||+.+|.+||+ ++++|+||||..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 207 KEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 432221111111111 1111222234456669999999999999996 699999999963
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-27 Score=248.27 Aligned_cols=220 Identities=16% Similarity=0.162 Sum_probs=154.7
Q ss_pred ccceeeccCCCCCcccccccccccccc----cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~----~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++.++..... ...+++++++.+.+|..++......+++.+++.++.||++||+|||++|
T Consensus 56 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 135 (311)
T cd07866 56 REIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH 135 (311)
T ss_pred HHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 355678889999999988844432211 2357889999888899888665556999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||++........... ..
T Consensus 136 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-----------------------------~~----------- 175 (311)
T cd07866 136 ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPK-----------------------------GG----------- 175 (311)
T ss_pred eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccc-----------------------------cC-----------
Confidence 99999999999999999999999998854322100000 00
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvl 261 (712)
............+++.|+|||.+.+. .++.++|||||||+
T Consensus 176 ---------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 216 (311)
T cd07866 176 ---------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV 216 (311)
T ss_pred ---------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence 00000001124678999999988664 48999999999999
Q ss_pred HHHhhC---CCCCChhhHHHH--Hhhccc----------------------CCCchh----hhcCchhHHHHHHcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTM--SSLRHR----------------------VLPPQL----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~--~~~~~~----------------------~~~~~~----~~~~~~~~~li~~~L~~dP 310 (712)
+|||++ ||.......... ...... ..++.. ....+...+|+.+||..+|
T Consensus 217 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 296 (311)
T cd07866 217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP 296 (311)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCc
Confidence 999999 333222211111 110000 001111 1122345599999999999
Q ss_pred CCCCCHHHHhcCcCC
Q 005147 311 SGRPKMGELLQSEFL 325 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~ 325 (712)
.+|||+.+++.||||
T Consensus 297 ~~R~t~~ell~~~~f 311 (311)
T cd07866 297 YKRLTASDALEHPYF 311 (311)
T ss_pred ccCcCHHHHhcCCCC
Confidence 999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=255.23 Aligned_cols=208 Identities=17% Similarity=0.222 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++|||++.+++ ++.... ....+++++++.|++|.+++.. ..+++.+++.++.||+.||+|||+.||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (343)
T cd07851 63 RELRLLKHMDHENVIGLLD-VFTPASSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHhccCCCHHHHHH-HhhccccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3556788899999999877 332221 2235899999999999999854 248999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||.+......
T Consensus 140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07851 140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHeEECCCCCEEEcccccccccccc------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++.+|+|||.+.+. .++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l 206 (343)
T cd07851 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHH
Confidence 0013568899999998653 588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc--CCC----------------------------chhhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR--VLP----------------------------PQLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~~~~~~li~~~L~~d 309 (712)
|+|++ ||....... ....+... ..+ .......+...+|+.+||..+
T Consensus 207 ~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~ 285 (343)
T cd07851 207 AELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence 99999 554333221 11111110 000 001112345559999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|||+.+|++||||......
T Consensus 286 P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 286 PDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCCCccccCCC
Confidence 9999999999999999876554
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=246.64 Aligned_cols=205 Identities=15% Similarity=0.148 Sum_probs=148.1
Q ss_pred eeeccC-CCCCcccccccccccc-cccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+ +|||++++++.++... .....+++++|+ .|++|.+++. .....+++..+..++.||+.||.|||++||
T Consensus 66 ~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 145 (286)
T cd06638 66 NILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT 145 (286)
T ss_pred HHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 345566 7999999888333222 233456777776 6999999873 233458899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++........
T Consensus 146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 179 (286)
T cd06638 146 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------- 179 (286)
T ss_pred cccCCCHHhEEECCCCCEEEccCCceeecccCCC----------------------------------------------
Confidence 9999999999999999999999998743211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRL 258 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSl 258 (712)
......|++.|+|||.+.. ..++.++|||||
T Consensus 180 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 180 --------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred --------------------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence 0001357899999999853 347899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCch-hhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||++|||++ ||........ .........+.. .... .....+++.+||+.+|.+|||+.++++|+||
T Consensus 216 Gvi~~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 216 GITAIELGDGDPPLADLHPMRA-LFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHHHHhcCCCCCCCCchhHH-HhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 999999998 5544332222 222222211111 1111 2345699999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=254.49 Aligned_cols=207 Identities=15% Similarity=0.258 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+++++ ++.... ....+++++++.+.+|..++. ..+++.++..++.||+.||+|||++||
T Consensus 63 ~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i 138 (342)
T cd07879 63 RELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGI 138 (342)
T ss_pred HHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 4566788899999999888 443322 224578999998888888762 248999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||+++.....
T Consensus 139 ~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 170 (342)
T cd07879 139 IHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 170 (342)
T ss_pred ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++++|+|||.+.+. .++.++|||||||++
T Consensus 171 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil 205 (342)
T cd07879 171 ---------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIM 205 (342)
T ss_pred ---------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHH
Confidence 0013568899999998764 589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-------------------------cCCC-ch----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-------------------------RVLP-PQ----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-------------------------~~~~-~~----~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||....... .+..+.. ...+ .. .....+...+||.+||+.|
T Consensus 206 ~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 284 (342)
T cd07879 206 AEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD 284 (342)
T ss_pred HHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence 99998 555432211 1111110 0000 00 1122344569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+||++.+++.||||......
T Consensus 285 P~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 285 VDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hhhCcCHHHHhcCcchhhcccc
Confidence 9999999999999999987653
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=246.94 Aligned_cols=202 Identities=19% Similarity=0.227 Sum_probs=152.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQI 91 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi 91 (712)
+..++..+.||||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.+++.++.||
T Consensus 58 ei~~l~~l~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 133 (283)
T cd05048 58 EAELMSDLQHPNIVCLLG-VCTK---EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQI 133 (283)
T ss_pred HHHHHHhcCCcccceEEE-EEcC---CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 445688899999999887 4432 3456777776 6899999994321 347889999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+|+||||+||+++.++.++++|||++.........
T Consensus 134 ~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~--------------------------------- 180 (283)
T cd05048 134 AAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY--------------------------------- 180 (283)
T ss_pred HHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccc---------------------------------
Confidence 99999999999999999999999999999999999987432111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
. ......+++.|+|||.+.+..++.
T Consensus 181 -----------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~ 205 (283)
T cd05048 181 -----------------------------------R--------------------VQSKSLLPVRWMPPEAILYGKFTT 205 (283)
T ss_pred -----------------------------------c--------------------ccCCCcccccccCHHHhccCcCch
Confidence 0 000134578899999998888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++|||||||++|||++ ||..... ...+..+.....++......+...+|+.+||..+|.+||++.+|+++
T Consensus 206 ~sDv~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 206 ESDIWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999996 5554333 23444444444443333334556699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=243.88 Aligned_cols=209 Identities=16% Similarity=0.228 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...|+.++|+|++++++ ++.+ ...+++++++ .|++|.+++.+.. .+++..+..++.||+.||.|||++||+|
T Consensus 52 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~H 126 (268)
T cd06630 52 KEIRLMARLNHPHIIRMLG-ATCE---DSHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQIIH 126 (268)
T ss_pred HHHHHHHHcCCCceehhhc-eecc---CCeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 4422 2345566665 7899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|+||+++.++ .++++|||.+.......... .+
T Consensus 127 ~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~-------------- 163 (268)
T cd06630 127 RDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE-------------- 163 (268)
T ss_pred CCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc--------------
Confidence 99999999998776 58999999875432210000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 164 -------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 164 -------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred -------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred hhC---CCCCChh--hHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 265 LFC---PFSTGEE--KTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 265 Ll~---pf~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|++ ||..... ..............+... ...+...+++.+||..+|.+|||+.++++||||.
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 201 MATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 998 5542221 112222222222222222 2345566899999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=252.68 Aligned_cols=215 Identities=16% Similarity=0.191 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|+|++.+++ ++.... ....+++++++.+++|.+++.. ..+++..++.++.||+.||.|||+.||+
T Consensus 52 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~iv 128 (336)
T cd07849 52 REIKILRRFKHENIIGILD-IIRPPSFESFNDVYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVL 128 (336)
T ss_pred HHHHHHHhCCCCCcCchhh-eeecccccccceEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4566788899999999887 443222 2346788999988899988843 2489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++......... .
T Consensus 129 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------------- 163 (336)
T cd07849 129 HRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T------------- 163 (336)
T ss_pred ccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-------------
Confidence 9999999999999999999999987443211000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
. ......|++.|+|||.+.+ ..++.++|||||||++|
T Consensus 164 --------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~ 201 (336)
T cd07849 164 --------------------------------------G----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILA 201 (336)
T ss_pred --------------------------------------C----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHH
Confidence 0 0011467899999998755 45899999999999999
Q ss_pred HhhC---CCCCChhhH--HHHHhhcccC----------------------CCc-----hhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKT--RTMSSLRHRV----------------------LPP-----QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~--~~~~~~~~~~----------------------~~~-----~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||....... ..+..+.... .+. ......+...+|+.+||+.+|+
T Consensus 202 el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 281 (336)
T cd07849 202 EMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPH 281 (336)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChh
Confidence 9999 454322111 0010000000 000 0112234556999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCc
Q 005147 312 GRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+|||+.++++||||......
T Consensus 282 ~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 282 KRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hCcCHHHHhcCccccccCCC
Confidence 99999999999999987654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=251.39 Aligned_cols=203 Identities=15% Similarity=0.115 Sum_probs=150.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++||||+++++ .+.. ....++++++.+++|.+++......++...++.++.||+.||+|||++||+||
T Consensus 58 ~e~~~l~~l~h~niv~~~g-~~~~---~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~ 133 (316)
T cd05108 58 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHR 133 (316)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEcC---CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 3456788899999999887 4432 23445556668999999997655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++........ +
T Consensus 134 dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--------------- 166 (316)
T cd05108 134 DLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y--------------- 166 (316)
T ss_pred ccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e---------------
Confidence 99999999999999999999988543221000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~ 205 (316)
T cd05108 167 -----------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 205 (316)
T ss_pred -----------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHH
Confidence 000022356799999999888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||.... .......+.....++..........+++.+||..+|.+||++.+++.+
T Consensus 206 t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 206 TFGSKPYDGIP-ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred cCCCCCCCCCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6 443322 222223333333333323334556699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=245.92 Aligned_cols=206 Identities=16% Similarity=0.166 Sum_probs=149.4
Q ss_pred cceeeccC-CCCCccccccccccccc---ccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~---~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+..++..+ +|+|++++++ .+.... ....+++++++ .+++|.+++... +..+++..++.++.||+.||.|||
T Consensus 52 e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH 130 (275)
T cd06608 52 EYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH 130 (275)
T ss_pred HHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 33456665 7999999888 443322 24456777777 588999988432 355899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+|+||+|+||+++.++.++++|||.+........
T Consensus 131 ~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 168 (275)
T cd06608 131 ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG------------------------------------------ 168 (275)
T ss_pred cCCcccCCCCHHHEEEccCCeEEECCCccceecccchh------------------------------------------
Confidence 99999999999999999999999999998743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----CCCCccc
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASD 254 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sD 254 (712)
......|+..|+|||.+... .++.++|
T Consensus 169 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 200 (275)
T cd06608 169 ------------------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSD 200 (275)
T ss_pred ------------------------------------------------hhcCccccccccCHhHhcccccccCCcccccc
Confidence 00013578899999987542 3788999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchh-hh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||||++|+|++ ||.......... .+.....+... .. ......+|+.+||..||++|||+.++++|||+
T Consensus 201 v~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 201 VWSLGITAIELADGKPPLCDMHPMRALF-KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHhHHHHHHHHhCCCCccccchHHHHH-HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999998 554433222222 22222221111 11 22344599999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=244.26 Aligned_cols=201 Identities=13% Similarity=0.143 Sum_probs=150.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..++|||++++++ ++. ....++++||+ .+++|.+++......+++.+++.++.||+.||+|||++||+|
T Consensus 55 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH 130 (266)
T cd05064 55 AEALTLGQFDHSNIVRLEG-VIT---RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVH 130 (266)
T ss_pred HHHHHHhcCCCCCcCeEEE-EEe---cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999887 442 23457777777 588999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||...........
T Consensus 131 ~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 163 (266)
T cd05064 131 KGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY----------------------------------------------- 163 (266)
T ss_pred ccccHhhEEEcCCCcEEECCCcccccccccchh-----------------------------------------------
Confidence 999999999999999999999876321100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 164 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 201 (266)
T cd05064 164 ------------------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV 201 (266)
T ss_pred ------------------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHH
Confidence 00002346789999999888899999999999999997
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++..........+++.+||..+|.+||++.+|++
T Consensus 202 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 202 MSYGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 75 66543332 233333333333322223344558999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=241.43 Aligned_cols=203 Identities=20% Similarity=0.278 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|+.++|||++.+++.+. ....+++++|+ .|++|.+++... ...+++..++.++.|++.+|.|||++||+
T Consensus 48 ~e~~~l~~~~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~ 123 (256)
T cd08220 48 NECQVLKLLSHPNIIEYYENFL----EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123 (256)
T ss_pred HHHHHHhhCCCCchhheeeeEe----cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3455788899999999887332 23456777776 689999999543 34589999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||+|+||+++.++ .++++|||.+...+...
T Consensus 124 h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08220 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------------------------------------- 156 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-----------------------------------------------
Confidence 999999999998554 57999999874332110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 192 (256)
T cd08220 157 --------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 192 (256)
T ss_pred --------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence 000135688999999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++ ||............. ....++......+...+++.+||..+|.+|||+.++++||||
T Consensus 193 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 193 ELASLKRAFEAANLPALVLKIM-SGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHhCCCCcccCchHHHHHHHH-hcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9998 665444333333322 222222222234556699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=250.26 Aligned_cols=204 Identities=20% Similarity=0.199 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..++..++||||+++++ .+.. ...+++++|| .|++|.+++.+. ..+++..+..++.||+.||.|||+ +||+
T Consensus 48 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~ 122 (308)
T cd06615 48 RELKVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIM 122 (308)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEee---CCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence 4555788899999999888 4422 3456777777 689999999654 348999999999999999999998 6999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++......
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 153 (308)
T cd06615 123 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 153 (308)
T ss_pred ECCCChHHEEEecCCcEEEccCCCccccccc-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 154 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~ 190 (308)
T cd06615 154 -------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVE 190 (308)
T ss_pred -------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHH
Confidence 0001457889999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhccc-----------------------------------CCCchhh--hcCchhHHHHHH
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLL--LKFPKEASFCLW 304 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~--~~~~~~~~li~~ 304 (712)
|++ ||...... .....+... ..++..+ ...+...+|+.+
T Consensus 191 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 269 (308)
T cd06615 191 MAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDK 269 (308)
T ss_pred HHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHH
Confidence 999 55432211 111111000 0000000 012345699999
Q ss_pred cCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 305 LLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 305 ~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||..+|++|||+.++++||||...
T Consensus 270 ~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 270 CLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HccCChhhCcCHHHHhcChhhhhc
Confidence 999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=252.97 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=148.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------------------------
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------------------------- 76 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------------------------- 76 (712)
+..++.++ +|+||+.+++ ++. .....++++++| .+++|.++|....
T Consensus 60 E~~~~~~l~~h~niv~~~~-~~~--~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (337)
T cd05054 60 ELKILIHIGHHLNVVNLLG-ACT--KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSV 136 (337)
T ss_pred HHHHHHhhccCcchhheee-eEe--cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccC
Confidence 44456666 8999999888 442 223456666666 6999999884311
Q ss_pred -------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEe
Q 005147 77 -------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 125 (712)
Q Consensus 77 -------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~d 125 (712)
..+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~D 216 (337)
T cd05054 137 SSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICD 216 (337)
T ss_pred CccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEec
Confidence 2478899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccc
Q 005147 126 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQE 205 (712)
Q Consensus 126 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (712)
||++......... +
T Consensus 217 fG~a~~~~~~~~~--------------------------------~---------------------------------- 230 (337)
T cd05054 217 FGLARDIYKDPDY--------------------------------V---------------------------------- 230 (337)
T ss_pred cccchhcccCcch--------------------------------h----------------------------------
Confidence 9988543111000 0
Q ss_pred ccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHh
Q 005147 206 HKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSS 281 (712)
Q Consensus 206 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~ 281 (712)
......++..|+|||++.+..++.++|||||||++|||++ ||............
T Consensus 231 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~ 288 (337)
T cd05054 231 ----------------------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR 288 (337)
T ss_pred ----------------------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH
Confidence 0001345678999999999999999999999999999986 55432222222233
Q ss_pred hcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 282 LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.....+.......+...+++.+||+.+|++||++.++++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 289 LKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33333322222334556699999999999999999999884
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=244.94 Aligned_cols=209 Identities=14% Similarity=0.142 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhh-cC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS-QG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs-~g 102 (712)
++..+|..++|+|++++++ .+.. ...+++++|+ .|++|.+++... ...+++..++.++.||+.||.|||+ .|
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~ 123 (286)
T cd06622 48 MELDILHKAVSPYIVDFYG-AFFI---EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123 (286)
T ss_pred HHHHHHHhcCCCcHHhhhh-heec---CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3555788899999999888 4432 2456677776 688999988543 2358999999999999999999997 59
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+.......
T Consensus 124 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 157 (286)
T cd06622 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL---------------------------------------------- 157 (286)
T ss_pred EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----------------------------------------------
Confidence 9999999999999999999999999874321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC------CCCccchH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIY 256 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~sDIw 256 (712)
.....|++.|+|||.+.+.. ++.++|||
T Consensus 158 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diw 191 (286)
T cd06622 158 ----------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVW 191 (286)
T ss_pred ----------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchH
Confidence 00034678899999985543 58899999
Q ss_pred HHHHHHHHhhC---CCCCChhh--HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 257 RLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||||++|+|++ ||...... ...+..+.....+.......+...+|+.+||..+|.+||++.++++||||......
T Consensus 192 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 192 SLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred hHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 99999999998 55433221 12222333333333333334556699999999999999999999999999876543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=269.17 Aligned_cols=209 Identities=19% Similarity=0.257 Sum_probs=162.2
Q ss_pred cceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 21 ~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+-||++|+ +|...+-+=|+.+++ +|.|+ ..+|+||+| +||+|-.+|.+.+ .+|+.-++.|+..|+.||+-+|
T Consensus 120 A~F~EERD--imv~~ns~Wiv~Lhy-AFQD~---~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH 192 (1317)
T KOG0612|consen 120 ACFREERD--IMVFGNSEWIVQLHY-AFQDE---RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH 192 (1317)
T ss_pred HHHHHHhH--HHHcCCcHHHHHHHH-HhcCc---cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH
Confidence 44788888 777778888888777 66443 345555555 8999999997777 6999999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+.|+|||||||+||||+..|+||++|||.|-....+ | .
T Consensus 193 ~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d----G--------------------------------~------ 230 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD----G--------------------------------T------ 230 (1317)
T ss_pred hccceeccCCcceeEecccCcEeeccchhHHhcCCC----C--------------------------------c------
Confidence 999999999999999999999999999999443322 0 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc----C-CCCCCccc
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCASD 254 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~~~~sD 254 (712)
......+|||-|.|||++. + +.|+..+|
T Consensus 231 -----------------------------------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecD 263 (1317)
T KOG0612|consen 231 -----------------------------------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECD 263 (1317)
T ss_pred -----------------------------------------------EEeccccCCCCccCHHHHHhhcCCccccCCccc
Confidence 0122368999999999994 2 45999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhc-c---cCCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEF 324 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~ 324 (712)
+|||||++|||++ ||+...-. ..+..+. + -.+| .....+....+||.+++. +|..|.. ++++..|||
T Consensus 264 wWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 264 WWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred hhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 9999999999997 89865544 3333333 3 2344 333345556699998875 6777886 999999999
Q ss_pred CCCC
Q 005147 325 LNEP 328 (712)
Q Consensus 325 ~~~~ 328 (712)
|.+.
T Consensus 341 F~g~ 344 (1317)
T KOG0612|consen 341 FEGI 344 (1317)
T ss_pred ccCC
Confidence 9774
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=244.30 Aligned_cols=201 Identities=15% Similarity=0.082 Sum_probs=148.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+...++.++||||+++++ ++. ....+++++++.+++|.+++......+++..++.|+.||+.||.|||++|++|||
T Consensus 59 ~~~~l~~l~h~~iv~~~~-~~~---~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d 134 (279)
T cd05111 59 HMLAMGSLDHAYIVRLLG-ICP---GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRN 134 (279)
T ss_pred HHHHHhcCCCCCcceEEE-EEC---CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence 344678899999999888 442 2234555555689999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.+|++|||.++........ .
T Consensus 135 lkp~nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~---------------- 166 (279)
T cd05111 135 LAARNILLKSDSIVQIADFGVADLLYPDDKK--------------------------------Y---------------- 166 (279)
T ss_pred cCcceEEEcCCCcEEEcCCccceeccCCCcc--------------------------------c----------------
Confidence 9999999999999999999988533111000 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ----------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t 206 (279)
T cd05111 167 ----------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206 (279)
T ss_pred ----------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHc
Confidence 0001245678999999988889999999999999999997
Q ss_pred ----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||...... .....+.....++...........++.+|+..+|++|||+.++++
T Consensus 207 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 207 YGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 55433222 222222332222222222334558999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=242.81 Aligned_cols=203 Identities=17% Similarity=0.195 Sum_probs=152.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ .+. ....+++++|+ .+++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~---~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 49 QEISMLKECRHPNIVAYFG-SYL---RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred HHHHHHHhCCCCChhceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 3445788899999999887 332 23457788887 578999998665456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------------------------------------------------- 155 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATI------------------------------------------------- 155 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhh-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvll 262 (712)
. ......++..|+|||.+.+. .++.++|||||||++
T Consensus 156 ----------------------------------~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 156 ----------------------------------A-------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred ----------------------------------h-------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 0 00013578899999999776 789999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC-CCch---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|+|++ ||......... ....... .++. .........+|+.+||..+|..|||+.+++.|+|
T Consensus 195 ~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 195 IELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999 55433322222 2222221 1111 1112234569999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=254.19 Aligned_cols=210 Identities=16% Similarity=0.206 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+++++ ++.... ....+++++++.|++|.+++... .+++..++.++.||+.||+|||++||
T Consensus 65 ~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i 141 (345)
T cd07877 65 RELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADI 141 (345)
T ss_pred HHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3556788899999999887 543322 22357889999999999988543 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++......
T Consensus 142 vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 173 (345)
T cd07877 142 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------------------------------------------ 173 (345)
T ss_pred eecCCChHHEEEcCCCCEEEeccccccccccc------------------------------------------------
Confidence 99999999999999999999999987432100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....++.+|+|||.+.+ ..++.++|||||||++
T Consensus 174 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il 208 (345)
T cd07877 174 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 208 (345)
T ss_pred ---------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHH
Confidence 001356889999998866 4588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-c-----------------------CCCc-----hhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-R-----------------------VLPP-----QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-~-----------------------~~~~-----~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............... . ..+. ......+...+||.+||+.+|
T Consensus 209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 288 (345)
T cd07877 209 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS 288 (345)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCCh
Confidence 99998 55433221111110000 0 0000 011123455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCch
Q 005147 311 SGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.+|||+.++++||||.....+.
T Consensus 289 ~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 289 DKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred hhcCCHHHHhcChhhhhcCCCC
Confidence 9999999999999999765543
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=245.36 Aligned_cols=202 Identities=17% Similarity=0.187 Sum_probs=149.9
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.+...+||||+.+++ .+.. ...+++++|+ .|++|.+++.+.+ .+++.+++.|+.|++.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 124 (278)
T cd05606 50 LVSTGDCPFIVCMSY-AFHT---PDKLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLK 124 (278)
T ss_pred HHHhCCCCcEeeeee-eeec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCC
Confidence 345578999998777 4422 2356677776 6999999985543 49999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||.+.......
T Consensus 125 p~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 151 (278)
T cd05606 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (278)
T ss_pred HHHEEECCCCCEEEccCcCccccCccC-----------------------------------------------------
Confidence 999999999999999999874321100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhhC-
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl~- 267 (712)
.....|+..|+|||.+.++ .++.++||||+||++|+|++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g 192 (278)
T cd05606 152 ---------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192 (278)
T ss_pred ---------------------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhC
Confidence 0013578899999999754 58999999999999999998
Q ss_pred --CCCCChhhH-HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||....... ...........+.......+...+++.+||..+|.+|| ++.++++||||....
T Consensus 193 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 193 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 554331111 11111111111111112245566999999999999999 999999999998864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=241.16 Aligned_cols=193 Identities=17% Similarity=0.141 Sum_probs=143.4
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
+....|||++.+++ .+.. ...+++++|+ .|++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||
T Consensus 39 ~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 113 (237)
T cd05576 39 IIPHCVPNMVCLHK-YIVS---EDSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNP 113 (237)
T ss_pred HHhcCCCceeehhh-heec---CCeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 34457999999887 3322 2456777776 6899999985543 489999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||.+...+...
T Consensus 114 ~Nil~~~~~~~~l~df~~~~~~~~~~------------------------------------------------------ 139 (237)
T cd05576 114 NNILLDDRGHIQLTYFSRWSEVEDSC------------------------------------------------------ 139 (237)
T ss_pred HHEEEcCCCCEEEecccchhcccccc------------------------------------------------------
Confidence 99999999999999999763321100
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCC
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFS 270 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~ 270 (712)
....++..|+|||.+.+..++.++||||+||++|||+++..
T Consensus 140 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~ 180 (237)
T cd05576 140 ---------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKT 180 (237)
T ss_pred ---------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcc
Confidence 00234677999999988889999999999999999998543
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 325 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~ 325 (712)
.................|. ...+...++|.+||+.||++||++ +++++||||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 181 LVECHPSGINTHTTLNIPE---WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred hhhcCchhcccccccCCcc---cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 2211111000000001111 123456699999999999999985 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=241.26 Aligned_cols=205 Identities=16% Similarity=0.151 Sum_probs=147.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++.+++ ++.. .+ ...++++++ .+++|.+++.+....+++..++.++.||+.||+|||+.||+||
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~~-~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 122 (262)
T cd05058 46 EGIIMKDFSHPNVLSLLG-ICLP-SE-GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHR 122 (262)
T ss_pred HHHHHccCCCCCcceEEE-Eeec-CC-CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 445688899999999887 4422 22 234555555 7899999996555557788889999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++....... ++.
T Consensus 123 dlk~~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------~~~------------- 156 (262)
T cd05058 123 DLAARNCMLDESFTVKVADFGLARDIYDKEY---------------------------------YSV------------- 156 (262)
T ss_pred ccCcceEEEcCCCcEEECCccccccccCCcc---------------------------------eee-------------
Confidence 9999999999999999999998853211100 000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 157 ----------------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred ----------------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 0000023467899999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |++...........+.....+.......+...+++.+||..+|++||++.++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 197 TRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred cCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 8 222222222233333333222222222344569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-27 Score=256.37 Aligned_cols=203 Identities=15% Similarity=0.177 Sum_probs=147.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
++..+|..+ +||||+++++ ++.. ....+++||+ .|++|.+++....
T Consensus 87 ~Ei~il~~l~~HpnIv~l~~-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (375)
T cd05104 87 SELKVLSYLGNHINIVNLLG-ACTV---GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSC 162 (375)
T ss_pred HHHHHHHHhcCCcceeeeee-eecc---CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccc
Confidence 345566667 8999999888 5422 2345566665 7999999984321
Q ss_pred ----------------------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 77 ----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 77 ----------------------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
..+++..++.|+.||+.||.|||++||+||||||
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp 242 (375)
T cd05104 163 DSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAA 242 (375)
T ss_pred hhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCch
Confidence 1367888999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||+++...... .+
T Consensus 243 ~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------- 270 (375)
T cd05104 243 RNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------- 270 (375)
T ss_pred hhEEEECCCcEEEecCccceeccCcc---------------------------------cc-------------------
Confidence 99999999999999999885432110 00
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
. ......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 271 -----------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~ 314 (375)
T cd05104 271 -----------------V-------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 314 (375)
T ss_pred -----------------c-------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 0 0000234567999999999999999999999999999996
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||............+.....+.......++..+|+.+||+.||++|||+.+|++
T Consensus 315 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 315 SPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 554433333333333333222221222345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-27 Score=245.49 Aligned_cols=209 Identities=16% Similarity=0.215 Sum_probs=149.1
Q ss_pred cceeeccC-CCCCccccccccccccc-ccCceEEEEeeCCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
+..+++.+ .||||+++++.+..... ....+++++++.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 50 E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 129 (295)
T cd07837 50 EISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH 129 (295)
T ss_pred HHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44566666 56999998873332222 12247888888777999988332 23589999999999999999999999
Q ss_pred CceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+||+++. ++.++++|||.+..+.....
T Consensus 130 ~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------- 166 (295)
T cd07837 130 GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK------------------------------------------- 166 (295)
T ss_pred CeeecCCChHHEEEecCCCeEEEeecccceecCCCcc-------------------------------------------
Confidence 9999999999999998 88999999998743211100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
......++++|+|||.+.+. .++.++||||||
T Consensus 167 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 199 (295)
T cd07837 167 -----------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVG 199 (295)
T ss_pred -----------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHH
Confidence 00012457899999988654 479999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc---------------------cCCCc-h----hhhcCchhHHHHHHcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLPP-Q----LLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~---------------------~~~~~-~----~~~~~~~~~~li~~~L~~dP 310 (712)
|++|+|++ ||............... ....+ . .....+...+||.+||.++|
T Consensus 200 ~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 279 (295)
T cd07837 200 CIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDP 279 (295)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCCh
Confidence 99999999 55443332222211110 00000 0 01123445589999999999
Q ss_pred CCCCCHHHHhcCcCCC
Q 005147 311 SGRPKMGELLQSEFLN 326 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~ 326 (712)
.+|||+.++|.||||+
T Consensus 280 ~~R~~~~eil~~~~~~ 295 (295)
T cd07837 280 AKRISAKAALTHPYFD 295 (295)
T ss_pred hhcCCHHHHhcCCCcC
Confidence 9999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=251.56 Aligned_cols=215 Identities=18% Similarity=0.214 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++.+++ ++.... ....+++++++.+++|.+++.... .+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 48 REIKLLRHLRHENIIGLLD-ILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred HHHHHHHhcCCcchhhhhh-hhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788899999999888 443332 334678999998889999995544 599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+.........
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~---------------------------------------------- 159 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE---------------------------------------------- 159 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc----------------------------------------------
Confidence 9999999999999999999999988433211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
+.......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 160 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~ 198 (330)
T cd07834 160 -----------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFA 198 (330)
T ss_pred -----------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHH
Confidence 0000113578999999999888 7999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc--CCCc------------------------h----hhhcCchhHHHHHHcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR--VLPP------------------------Q----LLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~--~~~~------------------------~----~~~~~~~~~~li~~~L~~dP 310 (712)
+|++ ||...... ..+..+... ..++ . .....+...+|+.+||+.+|
T Consensus 199 ~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 277 (330)
T cd07834 199 ELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDP 277 (330)
T ss_pred HHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCCh
Confidence 9999 44433221 111111110 0000 0 01123445589999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.++++||||......
T Consensus 278 ~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 278 KKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhCCCHHHHHhCccHHhhccc
Confidence 999999999999999876554
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=239.92 Aligned_cols=202 Identities=15% Similarity=0.187 Sum_probs=148.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|+.++||||+++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 42 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 117 (252)
T cd05084 42 QEARILKQYSHPNIVRLIG-VCTQ---KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIH 117 (252)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcC---CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4455788899999999887 4432 2456777776 689999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++...... .+
T Consensus 118 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~-------------- 149 (252)
T cd05084 118 RDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY-------------- 149 (252)
T ss_pred cccchheEEEcCCCcEEECccccCcccccc----------------------------------cc--------------
Confidence 999999999999999999999987432110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ........+..|+|||.+.+..++.++|||||||++|||
T Consensus 150 --------~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~ 189 (252)
T cd05084 150 --------A--------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEA 189 (252)
T ss_pred --------c--------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHH
Confidence 0 000001124569999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+|+.+||..+|++|||+.++++
T Consensus 190 ~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 190 FSLGAVPYANLSN-QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HhCCCCCccccCH-HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 96 4433222 2223333332222222222345559999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=240.53 Aligned_cols=203 Identities=22% Similarity=0.195 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.++|+|++++++ .+. ....+++++|+ .|++|.+++.+.. .+++..+..++.||+.||.|||+.||+|
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 125 (258)
T cd06632 51 QEIALLSKLQHPNIVQYLG-TER---EEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTVH 125 (258)
T ss_pred HHHHHHHhcCCCCchheee-eEe---cCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445678899999999887 432 22456777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 126 ~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------------------- 156 (258)
T cd06632 126 RDIKGANILVDTNGVVKLADFGMAKQVVEFS------------------------------------------------- 156 (258)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeccccc-------------------------------------------------
Confidence 9999999999999999999999874321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.... ++.++|+|||||++|+
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~ 194 (258)
T cd06632 157 ------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLE 194 (258)
T ss_pred ------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence 000135788999999987766 8999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||..................+.......+...+++.+||..+|.+||++.+++.|||+
T Consensus 195 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 195 MATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 998 5544432222222222122222222234556699999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=256.66 Aligned_cols=203 Identities=18% Similarity=0.202 Sum_probs=147.6
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------------------- 75 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------------------------- 75 (712)
.+..+++.+ +|+||+++++ .+. ....+++++|+ .+++|.+++...
T Consensus 90 ~E~~il~~l~~h~nIv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
T cd05106 90 SELKILSHLGQHKNIVNLLG-ACT---HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKK 165 (374)
T ss_pred HHHHHHHhhccCCceeeEee-Eec---CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcc
Confidence 345567777 8999999887 442 23467777777 599999988431
Q ss_pred ----------------------------------------CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceee
Q 005147 76 ----------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (712)
Q Consensus 76 ----------------------------------------~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll 115 (712)
...+++.+++.|+.||+.||+|||++||+||||||+||++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~ 245 (374)
T cd05106 166 YIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL 245 (374)
T ss_pred cccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE
Confidence 1236788899999999999999999999999999999999
Q ss_pred cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccc
Q 005147 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (712)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~ 195 (712)
+.++.++|+|||+++...... .+
T Consensus 246 ~~~~~~kL~DfGla~~~~~~~---------------------------------~~------------------------ 268 (374)
T cd05106 246 TDGRVAKICDFGLARDIMNDS---------------------------------NY------------------------ 268 (374)
T ss_pred eCCCeEEEeeceeeeeccCCc---------------------------------ce------------------------
Confidence 999999999999885321110 00
Q ss_pred ccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCC
Q 005147 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFST 271 (712)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~ 271 (712)
. ......++..|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 269 ------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 269 ------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred ------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 0 0000234667999999988889999999999999999985 5554
Q ss_pred ChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..........+.....+.......+...+++.+||+.+|.+|||+.++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 318 ILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 33322222322222222111122355669999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=246.11 Aligned_cols=205 Identities=16% Similarity=0.131 Sum_probs=155.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..+++.++|||++.+++ ++.. ....++++|+..++|.+++......+++.++..++.||+.||.|||++||+|||
T Consensus 75 e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~d 150 (317)
T cd06635 75 EVKFLQRIKHPNSIEYKG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 150 (317)
T ss_pred HHHHHHhCCCCCEEEEEE-EEee---CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 455678899999999887 4432 345788888877789888855555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||++......
T Consensus 151 L~p~Nil~~~~~~~kl~dfg~~~~~~~~---------------------------------------------------- 178 (317)
T cd06635 151 IKAGNILLTEPGQVKLADFGSASIASPA---------------------------------------------------- 178 (317)
T ss_pred CCcccEEECCCCCEEEecCCCccccCCc----------------------------------------------------
Confidence 9999999999999999999987321100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~e 264 (712)
....|+..|+|||.+. ...++.++|||||||++||
T Consensus 179 ------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~e 216 (317)
T cd06635 179 ------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 216 (317)
T ss_pred ------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence 0035688899999974 3458999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||..................+.......+...+++.+||+.+|.+||++.++++|+|+.....
T Consensus 217 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 217 LAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred HHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 998 554433322222222222222111122334569999999999999999999999999876544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-27 Score=243.73 Aligned_cols=207 Identities=17% Similarity=0.190 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++.+++ .+.+ ...+++++|+ .|++|.+++... .+++.++..++.||+.||+|||+.|++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH 124 (277)
T cd06640 51 QEITVLSQCDSPYVTKYYG-SYLK---GTKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIH 124 (277)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4555788899999999888 4432 3457777776 689999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 125 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 156 (277)
T cd06640 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------------ 156 (277)
T ss_pred cCCChhhEEEcCCCCEEEcccccceeccCCcc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|+|||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el 194 (277)
T cd06640 157 ------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHH
Confidence 00013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+...........+++.+||..+|++||++.++++||||.....
T Consensus 195 ~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 195 AKGEPPNSDMHPM-RVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred HHCCCCCCCcChH-hHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 99 44322221 222222222222222222344559999999999999999999999999976543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=240.73 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|||++.+++ .+. ....+++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++|++
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08218 48 KEVAVLSNMKHPNIVQYQE-SFE---ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL 123 (256)
T ss_pred HHHHHHHhCCCCCeeeeEe-eec---CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 3455788999999999887 442 23456777776 58999998844 334588999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+........
T Consensus 124 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08218 124 HRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE----------------------------------------------- 156 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEeeccceeecCcchh-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~ 193 (256)
T cd08218 157 -------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYE 193 (256)
T ss_pred -------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHH
Confidence 0001346888999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||....... ....+.....++..........++|.+||+.+|.+||++.++++||||
T Consensus 194 l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 194 MCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999 555443332 333333444443333334556699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=255.17 Aligned_cols=213 Identities=15% Similarity=0.141 Sum_probs=151.1
Q ss_pred cceeeccCCCCCcccccccccccccc-----------cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAA-----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~-----------~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~ 96 (712)
+..+++.++|||++.+++ ++..... ...+++++|+.+++|.+++... .+++..++.++.||+.||.
T Consensus 52 Ei~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 52 EIKIIRRLDHDNIVKVYE-VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHhcCCCcchhhHh-hhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 455688899999999887 3332211 1357889999888999988533 4899999999999999999
Q ss_pred HhhhcCceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 97 AAHSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
|||+.||+||||||+||+++. ++.++++|||.++........ ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 999999999999999999984 557899999987432110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sD 254 (712)
......++..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0000246889999998755 45889999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcc-----------------------cCCCc----h-hhhcCchhHHHHH
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-----------------------RVLPP----Q-LLLKFPKEASFCL 303 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~-----------------------~~~~~----~-~~~~~~~~~~li~ 303 (712)
||||||++|+|++ ||............+.. ...+. . .........+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999998 66544332222111110 00000 0 1112234458999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||..||.+|||+.++|+||||+....
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccC
Confidence 999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=242.68 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++++++|||++.+++ .+. ....+++++++ .|++|.+++... ..+++.++..|+.||++||.|||++||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h 123 (258)
T cd05578 49 NERRILQELNHPFLVNLWY-SFQ---DEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIH 123 (258)
T ss_pred HHHHHHHhCCCCChHHHHH-hhc---CCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3445788999999999877 442 33456777776 699999999555 45899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 124 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------- 154 (258)
T cd05578 124 RDIKPDNILLDEQGHVHITDFNIATKVTPDT------------------------------------------------- 154 (258)
T ss_pred cCCCHHHeEEcCCCCEEEeecccccccCCCc-------------------------------------------------
Confidence 9999999999999999999999874321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 155 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l 192 (258)
T cd05578 155 ------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYEC 192 (258)
T ss_pred ------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHH
Confidence 00013468889999999888899999999999999999
Q ss_pred hC---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH--HHHhcCcCC
Q 005147 266 FC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM--GELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~eiL~hp~~ 325 (712)
++ ||..... .......... ..+.......+...++|.+||..+|.+||++ .++++||||
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 193 LRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 98 5554332 2222222221 1111122223455699999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-28 Score=253.41 Aligned_cols=230 Identities=17% Similarity=0.207 Sum_probs=174.8
Q ss_pred ccccccccccCCCCCcceeee----ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCC
Q 005147 6 LRGERFGVRGDDSNDFELRKH----SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVD 80 (712)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~~----~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~ 80 (712)
..|+.++|+=.+..+.--+++ .+..||..+.||.||.+-+ .| +. .+.+++|||-..|++.+.| .....+|+
T Consensus 587 ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~-M~--ET-~ervFVVMEKl~GDMLEMILSsEkgRL~ 662 (888)
T KOG4236|consen 587 KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLEC-MF--ET-PERVFVVMEKLHGDMLEMILSSEKGRLP 662 (888)
T ss_pred ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEE-ee--cC-CceEEEEehhhcchHHHHHHHhhcccch
Confidence 456666666555543332222 3456899999999999777 44 22 3456777777666666655 44555699
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
+...+.++.||+.||.|||-+||+|+||||+|||+. +.-++|+||||+++.+|...
T Consensus 663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--------------------- 721 (888)
T KOG4236|consen 663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--------------------- 721 (888)
T ss_pred HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---------------------
Confidence 999999999999999999999999999999999997 44689999999998776542
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
| ....+|||.
T Consensus 722 -------------F---------------------------------------------------------RrsVVGTPA 731 (888)
T KOG4236|consen 722 -------------F---------------------------------------------------------RRSVVGTPA 731 (888)
T ss_pred -------------h---------------------------------------------------------hhhhcCCcc
Confidence 1 112689999
Q ss_pred ccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCC
Q 005147 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R 313 (712)
|.|||+++...|..+-|+||+||++|.-|. ||...++-...+++...- +|+..+. ..+.+.+||..+|+..=.+|
T Consensus 732 YLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM-yPp~PW~eis~~AidlIn~LLqVkm~kR 810 (888)
T KOG4236|consen 732 YLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM-YPPNPWSEISPEAIDLINNLLQVKMRKR 810 (888)
T ss_pred ccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc-cCCCchhhcCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999887 554444433344433333 4555444 44555699999999999999
Q ss_pred CCHHHHhcCcCCCCCcCc
Q 005147 314 PKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~ 331 (712)
.|++..|.|||+++...-
T Consensus 811 ysvdk~lsh~Wlq~yq~w 828 (888)
T KOG4236|consen 811 YSVDKSLSHPWLQDYQTW 828 (888)
T ss_pred cchHhhccchhhhcchHH
Confidence 999999999999987553
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-27 Score=240.56 Aligned_cols=202 Identities=14% Similarity=0.145 Sum_probs=151.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++++++ +++. ..+++++|+ .+++|.+++......+++..++.++.||+.||.|||++|++|
T Consensus 44 ~E~~~l~~l~h~~ii~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 118 (257)
T cd05115 44 REAEIMHQLDNPYIVRMIG-VCEA----EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH 118 (257)
T ss_pred HHHHHHHhcCCCCeEEEEE-EEcC----CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 4456788899999999887 5532 345666666 689999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 119 ~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 151 (257)
T cd05115 119 RDLAARNVLLVNQHYAKISDFGLSKALGADDSY----------------------------------------------- 151 (257)
T ss_pred cccchheEEEcCCCcEEeccCCccccccCCccc-----------------------------------------------
Confidence 999999999999999999999988533211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.. ......++..|+|||.+.+..++.++|||||||++|||
T Consensus 152 --------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05115 152 --------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEA 191 (257)
T ss_pred --------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......++..+++.+||..+|++||++.+|++
T Consensus 192 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 192 FSYGQKPYKKMKG-PEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred hcCCCCCcCcCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 85 5543322 2334444443333333334456669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-27 Score=243.95 Aligned_cols=204 Identities=17% Similarity=0.231 Sum_probs=148.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+|++.+++ .+.. ...+++++|+ .+++|..++... ..+++..++.++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H 123 (286)
T cd07847 49 REIRMLKQLKHPNLVNLIE-VFRR---KRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIH 123 (286)
T ss_pred HHHHHHHhCCCCCEeeeee-EEee---CCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 3455788899999999887 4422 3456777777 566777666443 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07847 124 RDVKPENILITKQGQIKLCDFGFARILTGPGD------------------------------------------------ 155 (286)
T ss_pred cCCChhhEEEcCCCcEEECccccceecCCCcc------------------------------------------------
Confidence 99999999999999999999998843211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+. .++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~ 193 (286)
T cd07847 156 ------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAE 193 (286)
T ss_pred ------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHH
Confidence 00013468899999998764 48899999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc--cc------------------CCCc---------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~--~~------------------~~~~---------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||.........+.... .. ..+. .+........+|+.+||..+|++
T Consensus 194 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 273 (286)
T cd07847 194 LLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTE 273 (286)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccc
Confidence 999 5544332222111100 00 0000 01112234459999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.+++.||||
T Consensus 274 Rp~~~eil~~~~f 286 (286)
T cd07847 274 RLSCEELLEHPYF 286 (286)
T ss_pred cCCHHHHhcCCCC
Confidence 9999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-27 Score=247.38 Aligned_cols=216 Identities=17% Similarity=0.152 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+||+.+++ ++.. ...+++++++ .+++|.+++.. ....+++..++.+++||+.||+|||++||+
T Consensus 48 ~Ei~~l~~l~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~iv 123 (314)
T cd08216 48 QEIITSRQLQHPNILPYVT-SFIV---DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFI 123 (314)
T ss_pred HHHHHHHhcCCcchhhhhh-eeec---CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788899999999888 4422 2345666666 68999999954 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++||+.+......... . ..+
T Consensus 124 H~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~----~-------------------------~~~------------- 161 (314)
T cd08216 124 HRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR----Q-------------------------RVV------------- 161 (314)
T ss_pred cCCCCcceEEEecCCceEEecCccceeecccccc----c-------------------------ccc-------------
Confidence 9999999999999999999999987432110000 0 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll 262 (712)
.. ......++..|+|||++.+. .++.++||||+||++
T Consensus 162 ------------------------~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il 200 (314)
T cd08216 162 ------------------------HD-----------------FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITA 200 (314)
T ss_pred ------------------------cc-----------------ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHH
Confidence 00 00013467889999998663 488999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--------CCch-----------------------h-hhcCchhHHHHHHcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------L-LLKFPKEASFCLWLLH 307 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--------~~~~-----------------------~-~~~~~~~~~li~~~L~ 307 (712)
|||++ ||............+.... .+.. . ....+...+|+.+||.
T Consensus 201 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 280 (314)
T cd08216 201 CELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQ 280 (314)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhh
Confidence 99998 6654433322222221110 0000 0 0011234589999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCc
Q 005147 308 PEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.+|++|||+.++|+||||+...
T Consensus 281 ~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 281 RDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cCCCcCcCHHHHhcCchHhhhc
Confidence 9999999999999999998664
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=240.80 Aligned_cols=195 Identities=17% Similarity=0.223 Sum_probs=141.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++.+++ ++.. ....++++|+ .+++|.+++...+..+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 123 (258)
T cd05078 48 EAASMMSQLSHKHLVLNYG-VCVC---GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH 123 (258)
T ss_pred HHHHHHHhCCCCChhheee-EEEe---CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3455788899999999888 4322 2345566666 689999999666556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 106 HNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 106 rDLkP~NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|||||+||+++.++. ++++|||.+......
T Consensus 124 ~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------ 161 (258)
T cd05078 124 GNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------ 161 (258)
T ss_pred CCCccceEEEecccccccCCCceEEecccccccccCCc------------------------------------------
Confidence 999999999987765 466666654211000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIw 256 (712)
....++..|+|||.+.+. .++.++|||
T Consensus 162 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 189 (258)
T cd05078 162 ----------------------------------------------------EILLERIPWVPPECIENPQNLSLAADKW 189 (258)
T ss_pred ----------------------------------------------------hhccccCCccCchhccCCCCCCchhhHH
Confidence 003467889999999774 489999999
Q ss_pred HHHHHHHHhhCC---CCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFCP---FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~p---f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||+++ +............... ...| ...+++..+++.+||+.+|++|||++++++.
T Consensus 190 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 190 SFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLP---APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCC---CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 999999999993 2111111111111111 1112 1234566799999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-27 Score=240.45 Aligned_cols=201 Identities=13% Similarity=0.128 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+++++ ++. ...+++++++ .+++|.+++.... .+++..+..++.||+.||+|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICE----AESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEc----CCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 3456788899999999887 442 2345666766 6789999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999998854322100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+ .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002345789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++......+...++|.+||+.+|++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 86 5543332 2334444444333333334456669999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=243.99 Aligned_cols=205 Identities=16% Similarity=0.237 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++ .+.+ ...+++++|+.+++|.+++.... ..+++..++.++.||+.||+|||++||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHT---ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEee---CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3456788899999999888 4422 34678888887779999884433 4589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++........
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPVN----------------------------------------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......++.+|++||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000134688999999986654 789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc-------------------cCCCc--------hhhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPP--------QLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............+.. ...+. ......+...+++.+||+.+|.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 44433221111111000 00000 001123445599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=241.17 Aligned_cols=205 Identities=19% Similarity=0.256 Sum_probs=151.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++++++ ++.. ...+++++|+ .|++|.+++++.+ .+++..++.++.||+.||.|||++|++|+
T Consensus 58 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (272)
T cd06629 58 EIETLKDLDHLNIVQYLG-FETT---EEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILHR 132 (272)
T ss_pred HHHHHHhcCCCCcceEEE-Eecc---CCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 445788899999999887 4432 2456666666 6999999996654 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 133 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 163 (272)
T cd06629 133 DLKADNLLVDADGICKISDFGISKKSDDIYD------------------------------------------------- 163 (272)
T ss_pred CCChhhEEEcCCCeEEEeecccccccccccc-------------------------------------------------
Confidence 9999999999999999999998743211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFE 264 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~e 264 (712)
+.......|+..|+|||.+.... ++.++|+||||+++|+
T Consensus 164 ---------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~ 204 (272)
T cd06629 164 ---------------------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLE 204 (272)
T ss_pred ---------------------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHH
Confidence 00001135788999999987654 8899999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||............... ...+...... .....+++.+||.++|.+|||+.++|+||||
T Consensus 205 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 205 MFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 999 55433332222221111 1122222222 3445599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=245.60 Aligned_cols=207 Identities=17% Similarity=0.157 Sum_probs=150.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhh----cCCCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL----DKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l----~~~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
+...+..+ +|+||+++++ ++.. ....++++++.+.+|.++. ......+++..+..++.|++.||+|||+.
T Consensus 52 e~~~l~~~~~~~~iv~~~~-~~~~---~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 127 (288)
T cd06616 52 DLDVVMRSSDCPYIVKFYG-ALFR---EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL 127 (288)
T ss_pred HHHHHHHhcCCCCEeeeee-EEec---CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 33456666 5999999888 3322 3456788888877776643 12234589999999999999999999985
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.++++|||++.......
T Consensus 128 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------- 162 (288)
T cd06616 128 KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI--------------------------------------------- 162 (288)
T ss_pred CeeccCCCHHHEEEccCCcEEEeecchhHHhccCC---------------------------------------------
Confidence 99999999999999999999999999874321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRL 258 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSl 258 (712)
......|+..|+|||.+.+. .++.++|||||
T Consensus 163 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~sl 196 (288)
T cd06616 163 ----------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSL 196 (288)
T ss_pred ----------------------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHH
Confidence 00013468889999999776 58999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhh----hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
||++|+|++ ||.........+........+.... ...+...+|+.+||+.+|++|||+.+++.||||....
T Consensus 197 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 197 GITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred HHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 999999998 5544332222333322222221111 1234456999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=238.85 Aligned_cols=202 Identities=17% Similarity=0.184 Sum_probs=143.5
Q ss_pred ccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccc-c
Q 005147 53 AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC-S 130 (712)
Q Consensus 53 ~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~-~ 130 (712)
...+.||++|..|.|+.++|+. ...+++...++.+.+||+++|.|||+.+++|-||||+|||+.++..++.-.-+.. .
T Consensus 162 yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 162 YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 3458999999999999999955 4567899999999999999999999999999999999999987666655332221 0
Q ss_pred CCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 005147 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (712)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (712)
.... ......+++|
T Consensus 242 ~~r~------------------------------------------------------------------~ks~~I~vID 255 (415)
T KOG0671|consen 242 FIRP------------------------------------------------------------------LKSTAIKVID 255 (415)
T ss_pred eecc------------------------------------------------------------------CCCcceEEEe
Confidence 0000 0001223444
Q ss_pred cccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCC---CCC--hhhHHHHHhhccc
Q 005147 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF---STG--EEKTRTMSSLRHR 285 (712)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf---~~~--~~~~~~~~~~~~~ 285 (712)
||.+...-+. ....+.|..|+|||++.+-+++.++||||+||+|+||++++ ... .++...|..+..
T Consensus 256 FGsAtf~~e~--------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG- 326 (415)
T KOG0671|consen 256 FGSATFDHEH--------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG- 326 (415)
T ss_pred cCCcceeccC--------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-
Confidence 4422111111 01256799999999999999999999999999999999943 333 345555555443
Q ss_pred CCCchhhhcC-------------------------------------------chhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 286 VLPPQLLLKF-------------------------------------------PKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 286 ~~~~~~~~~~-------------------------------------------~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.+|....... ....+|+.+||..||.+|+|+.|+|+|
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 2222111100 112389999999999999999999999
Q ss_pred cCCCCCc
Q 005147 323 EFLNEPR 329 (712)
Q Consensus 323 p~~~~~~ 329 (712)
|||+...
T Consensus 407 pFF~~~~ 413 (415)
T KOG0671|consen 407 PFFARLT 413 (415)
T ss_pred HHhhcCC
Confidence 9998754
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-27 Score=242.05 Aligned_cols=193 Identities=12% Similarity=0.117 Sum_probs=139.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..++||||+++++ ++.. ....++++|+ .+++|..++......+++..++.|+.||+.||+|||++||+|||
T Consensus 55 ~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 130 (262)
T cd05077 55 ASMMRQVSHKHIVLLYG-VCVR---DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGN 130 (262)
T ss_pred HHHHHhCCCCCEeeEEE-EEec---CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCC
Confidence 45678899999999888 4422 2344566666 68899988865555689999999999999999999999999999
Q ss_pred CCCCceeecCCCc-------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 108 VRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 108 LkP~NIll~~~~~-------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||+||+++.++. ++++|||++......
T Consensus 131 lkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~--------------------------------------------- 165 (262)
T cd05077 131 VCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR--------------------------------------------- 165 (262)
T ss_pred CCcccEEEecCCccCCCCceeEeCCCCCCccccCc---------------------------------------------
Confidence 9999999986654 788887766321100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-CCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlG 259 (712)
....++..|+|||.+. +..++.++||||||
T Consensus 166 -------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 196 (262)
T cd05077 166 -------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFG 196 (262)
T ss_pred -------------------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHH
Confidence 0034678899999886 45589999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||...... .. ......... ..........+|+.+||+.||.+||++.+|+++
T Consensus 197 ~~l~el~~~~~~p~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 197 TTLWEICYNGEIPLKDKTLA-EK-ERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHhCCCCCCCCcchh-HH-HHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99999974 44322211 11 111111111 111122445689999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=239.99 Aligned_cols=200 Identities=19% Similarity=0.184 Sum_probs=149.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..++|+|++++++ ++.. ...+++++|+ .+++|.+++.. ....+++..++.++.|++.||.|||++||+|
T Consensus 52 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 127 (263)
T cd05052 52 EAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127 (263)
T ss_pred HHHHHHhCCCCChhheEE-EEcC---CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 445788899999999887 4422 3356777776 68999999944 3345899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 128 ~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~----------------------------------------------- 160 (263)
T cd05052 128 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYT----------------------------------------------- 160 (263)
T ss_pred cccCcceEEEcCCCcEEeCCCccccccccceee-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 198 (263)
T cd05052 161 ------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198 (263)
T ss_pred ------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 199 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 199 ATYGMSPYPGID-LSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HcCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 96 454332 23333334333222222233345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-27 Score=240.17 Aligned_cols=198 Identities=16% Similarity=0.252 Sum_probs=150.8
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.....+|+|++++++ .+. ....+++++|+ .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|+||+
T Consensus 50 ~~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~ 124 (260)
T cd05611 50 MMIQGESPYVAKLYY-SFQ---SKDYLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124 (260)
T ss_pred HhhcCCCCCeeeeee-eEE---cCCeEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 445679999999887 442 23456677766 6999999995543 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||++......
T Consensus 125 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 150 (260)
T cd05611 125 PENLLIDQTGHLKLTDFGLSRNGLEN------------------------------------------------------ 150 (260)
T ss_pred HHHeEECCCCcEEEeecccceecccc------------------------------------------------------
Confidence 99999999999999999977321100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
....|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 151 ----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred ----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 00346888999999988889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhccc--CCCchhh-hcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHR--VLPPQLL-LKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~ 328 (712)
||...... .....+... ..+.... ...+...+++.+||+.+|.+||+ +.|+|.||||...
T Consensus 191 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 191 PPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66543332 222222221 1222222 23345569999999999999995 5799999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=243.59 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++.+++ .+. ....+++++|+ .+++|.+++.. ..+++..++.++.||++||.|||++||+|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH 124 (277)
T cd06642 51 QEITVLSQCDSPYITRYYG-SYL---KGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIH 124 (277)
T ss_pred HHHHHHHcCCCCccHhhhc-ccc---cCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 5566788899999999888 443 23456777777 58899998854 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 156 (277)
T cd06642 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------------ 156 (277)
T ss_pred cCCChheEEEeCCCCEEEccccccccccCcch------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 194 (277)
T cd06642 157 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hCCCCCChh--hHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FCPFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~pf~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+++..+... .......+.... ++..... .....+++.+||..+|.+||++.++++||||....
T Consensus 195 ~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 195 AKGEPPNSDLHPMRVLFLIPKNS-PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred HhCCCCCcccchhhHHhhhhcCC-CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 994333211 111122222222 2222222 23455999999999999999999999999987643
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=239.78 Aligned_cols=201 Identities=16% Similarity=0.211 Sum_probs=150.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++||||+++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05113 49 EAKVMMKLSHEKLVQLYG-VCTK---QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHR 124 (256)
T ss_pred HHHHHhcCCCCCeeeEEE-EEcc---CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445688899999999887 5532 2456777777 5889999996544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||.++........
T Consensus 125 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05113 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT------------------------------------------------ 156 (256)
T ss_pred ccCcceEEEcCCCCEEECCCccceecCCCcee------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 157 -----------------------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred -----------------------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHh
Confidence 000023467899999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....+...........+++.+||+.+|.+|||+.+++.+
T Consensus 196 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 196 SLGKMPYERFNN-SETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCCCCCcCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 7 4443332 22333333332222222233455699999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=243.44 Aligned_cols=207 Identities=16% Similarity=0.177 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|..++|||++.+++ .+.. ...+|+++++ .|++|.+++.+.. ..+++.+++.++.||+.||.|||++||+
T Consensus 42 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 117 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAY-AFET---KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117 (277)
T ss_pred HHHHHHHhCCCCCEeeeee-EEec---CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3556788899999999877 4422 2456777777 6899999995433 3589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.......
T Consensus 118 H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05577 118 YRDLKPENVLLDDHGNVRISDLGLAVELKGGK------------------------------------------------ 149 (277)
T ss_pred cCCCCHHHEEECCCCCEEEccCcchhhhccCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 150 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 150 -------------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred -------------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 0000346778999999988889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||..... .......... ..........+...++|.+||+.+|.+|| ++.++++||||....
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 187 MIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 998 5543322 1111111111 11111112345566999999999999999 888999999997643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=242.66 Aligned_cols=204 Identities=18% Similarity=0.254 Sum_probs=153.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+...|+.++|+|++++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+|+
T Consensus 47 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (283)
T cd05118 47 REIKLLKELNHPNIIKLLD-VFRH---KGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHR 122 (283)
T ss_pred HHHHHHHHhcCCCcchHHH-hhcc---CCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3445788899999999887 4432 25778888888789999986654569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+....
T Consensus 123 dl~p~nili~~~~~~~l~df~~~~~~~~~~~------------------------------------------------- 153 (283)
T cd05118 123 DLKPENLLINTEGVLKLADFGLARSFGSPVR------------------------------------------------- 153 (283)
T ss_pred CcCHHHEEECCCCcEEEeeeeeeEecCCCcc-------------------------------------------------
Confidence 9999999999999999999998743322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++.+|+|||.+.+. .++.++|||||||++|+|
T Consensus 154 -----------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l 192 (283)
T cd05118 154 -----------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAEL 192 (283)
T ss_pred -----------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHH
Confidence 00013468899999998776 689999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC---------------------C----C----chhhhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV---------------------L----P----PQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~---------------------~----~----~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||...... .....+.... . . ........+..+||.+||.++|.+|
T Consensus 193 ~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 271 (283)
T cd05118 193 LSRRPLFPGKSEI-DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKR 271 (283)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccC
Confidence 99 45433322 1111111000 0 0 0011123345599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.+++.||||
T Consensus 272 p~~~~ll~~~~~ 283 (283)
T cd05118 272 ITAEQALAHPYF 283 (283)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=243.42 Aligned_cols=207 Identities=17% Similarity=0.149 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.|||++.+++ ++... ....+++++|+ .|++|.+++.+....+++.++..++.||+.||+|||++||+|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H 132 (284)
T cd05079 55 KEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 132 (284)
T ss_pred HHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4556789999999999877 54332 23345666666 699999999555445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||+++........ ..
T Consensus 133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------~~ 167 (284)
T cd05079 133 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEY---------------------------------------------YT 167 (284)
T ss_pred cccchheEEEcCCCCEEECCCccccccccCccc---------------------------------------------ee
Confidence 999999999999999999999988543211000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 168 ------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el 205 (284)
T cd05079 168 ------------------------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYEL 205 (284)
T ss_pred ------------------------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhh
Confidence 00003456789999999888899999999999999999
Q ss_pred hCCCCCCh-----------------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FCPFSTGE-----------------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~pf~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++...+.. ........+......+......+...+|+.+||+.+|.+|||+.+++++
T Consensus 206 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 206 LTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred hcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 98221110 0011111111122222222234556699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-27 Score=243.32 Aligned_cols=203 Identities=16% Similarity=0.199 Sum_probs=148.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++++++ .+.. ...+++++|+ .+++|.+++.... .+++..+..++.||+.||+|||+.||+|
T Consensus 55 ~e~~~l~~~~h~~ii~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (267)
T cd06646 55 QEIFMVKECKHCNIVAYFG-SYLS---REKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeeeE-EEEe---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3556788899999999887 4422 2356777777 6889999985443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||++........
T Consensus 130 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06646 130 RDIKGANILLTDNGDVKLADFGVAAKITATIA------------------------------------------------ 161 (267)
T ss_pred cCCCHHHEEECCCCCEEECcCccceeeccccc------------------------------------------------
Confidence 99999999999999999999998843211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+. ...++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il 199 (267)
T cd06646 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHH
Confidence 000135788999999884 34478899999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|||++ ||..................++... .......+|+.+||..+|++|||++++|+|+|
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 200 IELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99998 4433222111111111111112111 12235559999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=241.61 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=151.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++. .....++++++.+++|.+++.... ..+++..++.++.||+.||+|||++|++|+
T Consensus 48 E~~~l~~l~~~~iv~~~~-~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~ 123 (283)
T cd07835 48 EISLLKELNHPNIVRLLD-VVH---SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123 (283)
T ss_pred HHHHHHhcCCCCccCHhh-eec---cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence 445788899999999888 443 235678888887789999984433 358999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+....
T Consensus 124 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~------------------------------------------------- 154 (283)
T cd07835 124 DLKPQNLLIDREGALKLADFGLARAFGVPVR------------------------------------------------- 154 (283)
T ss_pred CCCHHHEEEcCCCcEEEeecccccccCCCcc-------------------------------------------------
Confidence 9999999999999999999998843321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|+|
T Consensus 155 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 193 (283)
T cd07835 155 -----------------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM 193 (283)
T ss_pred -----------------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHH
Confidence 00002457889999988765 478999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC-------------------C----Cch----hhhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV-------------------L----PPQ----LLLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-------------------~----~~~----~~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||................. . ... .....+...+++.+||+.+|.+|||
T Consensus 194 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 273 (283)
T cd07835 194 VNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS 273 (283)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC
Confidence 99 5543332221111111000 0 000 1112234558999999999999999
Q ss_pred HHHHhcCcCC
Q 005147 316 MGELLQSEFL 325 (712)
Q Consensus 316 ~~eiL~hp~~ 325 (712)
+.++++||||
T Consensus 274 ~~~il~~~~~ 283 (283)
T cd07835 274 AKAALQHPYF 283 (283)
T ss_pred HHHHhcCCCC
Confidence 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=244.91 Aligned_cols=222 Identities=15% Similarity=0.154 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++||||+++++ .+. ....+++++|+ .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 50 VERDILTFAENPFVVSMFC-SFE---TKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEe---cCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445778899999999887 442 23467778877 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++..+.++++|||.++.......... +
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------~-------------- 160 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL------------------------------Y-------------- 160 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCccccCcCccccc------------------------------c--------------
Confidence 99999999999999999999998743111000000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+..... ...........|+..|+|||.+.+..++.++|||||||++|||
T Consensus 161 ------------------------~~~~~~-------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el 209 (305)
T cd05609 161 ------------------------EGHIEK-------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209 (305)
T ss_pred ------------------------cccccc-------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence 000000 0000000013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC--CCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~ 329 (712)
++ ||..... ........... .|.......+...+++.+||+.+|.+||+ +.++|+||||....
T Consensus 210 ~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 210 LVGCVPFFGDTP-EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred HhCCCCCCCCCH-HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 99 6654332 23333332221 22221222344569999999999999997 79999999997653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=240.55 Aligned_cols=202 Identities=19% Similarity=0.209 Sum_probs=147.7
Q ss_pred eccCCCCCccccccccccccc-ccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+..++|+|++++++.+...+. ....+++++++.+++|.+++... ...+++..++.++.||+.||.|||+.||+|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 445679999998883332221 12247888888777999988443 3358999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999998743311100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 000246788999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhccc------------------CCC----ch----hhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 -PFSTGEEKTRTMSSLRHR------------------VLP----PQ----LLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~------------------~~~----~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||...... .....+... .++ .. .....+...++|.+||..||.+||++.+++
T Consensus 204 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 204 PLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CcccCCChH-HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 34332222 111111100 000 00 011123445899999999999999999999
Q ss_pred cCcCC
Q 005147 321 QSEFL 325 (712)
Q Consensus 321 ~hp~~ 325 (712)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=237.57 Aligned_cols=202 Identities=20% Similarity=0.240 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC--------CCCCChhHHHHHHHHHHHHHHHh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~--------~~~l~~~~~~~i~~qil~~l~~l 98 (712)
+...+..+.|+|++++++ ++.. ...+++++++. |++|.+++... ...+++.++..++.||+.||+||
T Consensus 46 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 121 (262)
T cd00192 46 EARVMKKLGHPNVVRLLG-VCTE---EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121 (262)
T ss_pred HHHHHhhcCCCChheeee-eecC---CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 445678888999999887 4433 45677777775 99999999654 35689999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+|+||||+||+++.++.++++|||.+........ +
T Consensus 122 H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------- 161 (262)
T cd00192 122 ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY---------------------------------Y------- 161 (262)
T ss_pred HcCCcccCccCcceEEECCCCcEEEcccccccccccccc---------------------------------c-------
Confidence 999999999999999999999999999998854322100 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.......++..|+|||.+.+..++.++|||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (262)
T cd00192 162 ------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSF 193 (262)
T ss_pred ------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHH
Confidence 00001345788999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|++ ||.... .......+.............+...+++.+||..+|.+|||+.+++++
T Consensus 194 G~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 194 GVLLWEIFTLGATPYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999987 444332 223333443333333333334566699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-27 Score=240.17 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ .+. ....+++++++ .|++|.+++.+.+ .+++..+..++.||+.||.|||++||+|+
T Consensus 43 e~~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~ 117 (265)
T cd05579 43 ERDILSQAQSPYVVKLYY-SFQ---GKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHR 117 (265)
T ss_pred HHHHHHhCCCcchhHHHH-hee---cCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecC
Confidence 345688899999999877 442 23456777777 5889999996544 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......... ..
T Consensus 118 di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~--------------- 151 (265)
T cd05579 118 DLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL--------------- 151 (265)
T ss_pred CCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc---------------
Confidence 99999999999999999999987432111000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...........++..|+|||.+.+..++.++||||||+++|+|+
T Consensus 152 ------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 152 ------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred ------------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 00000001145788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCCCH---HHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~eiL~hp~~~~~ 328 (712)
+ ||...... .....+.... .++......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 196 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 196 VGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred hCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 8 55444332 2222222222 222222224555699999999999999999 999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-27 Score=249.92 Aligned_cols=216 Identities=19% Similarity=0.166 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.. ...+++++++ .+++|.+++.+. ...+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~~~~l~h~niv~~~~-~~~~---~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 48 NEVVLSHFFRHPNIMTSWT-VFTT---GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred HHHHHHHhCCCCCcceEee-eEec---CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3445677799999999888 5532 3356666666 688999998543 33489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++||+.+...... .+..+
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~--------- 159 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAK--------- 159 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Ccccc---------
Confidence 9999999999999999999988754211000 00000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll 262 (712)
. ..+ .+ ....++..|+|||++.+. .++.++|||||||++
T Consensus 160 ------------~----------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l 200 (328)
T cd08226 160 ------------V----------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITA 200 (328)
T ss_pred ------------c----------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence 0 000 00 002345679999999764 378999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---------------------------------------------chhhhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---------------------------------------------PQLLLK 294 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~ 294 (712)
|+|++ ||............+....+. +.....
T Consensus 201 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
T cd08226 201 CELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTF 280 (328)
T ss_pred HHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhh
Confidence 99998 554333222222221111000 000111
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.+...+|+.+||..||++|||+.++|+||||....
T Consensus 281 ~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 281 SPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 23455999999999999999999999999997543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=242.32 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------CCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qil~~l~ 96 (712)
++..+++.++||||+++++ .+. .....++++|+ .+++|.+++.+.. ..++...++.++.||+.||+
T Consensus 58 ~e~~~l~~l~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 133 (277)
T cd05062 58 NEASVMKEFNCHHVVRLLG-VVS---QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEc---CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 3456788899999999887 442 22356667766 6899999984321 22567788999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.|++|+||||+||+++.++.++++|||++.........
T Consensus 134 ~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------- 175 (277)
T cd05062 134 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------------------------------- 175 (277)
T ss_pred HHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee--------------------------------------
Confidence 999999999999999999999999999999987433211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05062 176 --------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVW 205 (277)
T ss_pred --------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHH
Confidence 000002357789999999988899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||++ ||..... ......+.....+.......+...+++.+||+.+|.+|||+.+++++
T Consensus 206 slG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 206 SFGVVLWEIATLAEQPYQGMSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999987 4543322 23333333332222222233445699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=241.21 Aligned_cols=202 Identities=14% Similarity=0.087 Sum_probs=148.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..+.||||+.+++ .+. ....+++++++.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~---~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~ 133 (279)
T cd05109 58 DEAYVMAGVGSPYVCRLLG-ICL---TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHR 133 (279)
T ss_pred HHHHHHHhcCCCCCceEEE-EEc---CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 4455678899999999887 332 223445555557999999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||++..++.+|++|||+++........ +
T Consensus 134 dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~--------------- 166 (279)
T cd05109 134 DLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y--------------- 166 (279)
T ss_pred ccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e---------------
Confidence 99999999999999999999988543211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05109 167 -----------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELM 205 (279)
T ss_pred -----------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 000012356799999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 206 t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 206 TFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred cCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6 4433222 2222333333333333334455669999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=239.18 Aligned_cols=205 Identities=13% Similarity=0.085 Sum_probs=147.5
Q ss_pred cceeeccCCCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+..+++.++|+||+++++..+.... .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||
T Consensus 50 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 129 (272)
T cd05075 50 EAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS 129 (272)
T ss_pred HHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4456888999999998873322211 11234444454 68999998721 2234789999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+||||||+||+++.++.++++|||+++........
T Consensus 130 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 168 (272)
T cd05075 130 SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY----------------------------------------- 168 (272)
T ss_pred HCCeeccccchhheEEcCCCCEEECCCCcccccCcccce-----------------------------------------
Confidence 999999999999999999999999999988543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
. ......+++.|+|||.+.+..++.++||||||
T Consensus 169 ---------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG 201 (272)
T cd05075 169 ---------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFG 201 (272)
T ss_pred ---------------------------e--------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHH
Confidence 0 00002346779999999888899999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .......+.....++..........+++.+||..+|.+|||+.++++
T Consensus 202 ~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 202 VTMWEIATRGQTPYPGVE-NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999987 454332 23344444444333322233344569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=242.44 Aligned_cols=205 Identities=17% Similarity=0.195 Sum_probs=151.7
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP 110 (712)
+...+|+|++.+++ .+.+ ...+++++++.+++|..++......+++..+..++.||+.||.|||+ .||+||||+|
T Consensus 68 ~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p 143 (296)
T cd06618 68 LKSHDCPYIVKCYG-YFIT---DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKP 143 (296)
T ss_pred HhccCCCchHhhhe-eeec---CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcH
Confidence 34457999999888 4432 33578889998888888775544568999999999999999999997 5999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++|+|||.+.......
T Consensus 144 ~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------------ 169 (296)
T cd06618 144 SNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------------ 169 (296)
T ss_pred HHEEEcCCCCEEECccccchhccCCC------------------------------------------------------
Confidence 99999999999999999874321110
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHHHHhh
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELF 266 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+.. ++.++|||||||++|+|+
T Consensus 170 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~ 212 (296)
T cd06618 170 -------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA 212 (296)
T ss_pred -------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence 000024678899999987553 889999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchh--hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||..................+... ........+|+.+||..+|.+||++.++++||||......
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 282 (296)
T cd06618 213 TGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA 282 (296)
T ss_pred hCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence 9 554433322333222222211111 1123445699999999999999999999999999976543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=237.23 Aligned_cols=208 Identities=22% Similarity=0.226 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|+|++++++ .+.... ...+++++|+. +++|.+++.+.. .+++.++..++.|++.||.|||+.|++|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h 124 (260)
T cd06606 48 REIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVH 124 (260)
T ss_pred HHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445788899999999887 332221 24567777774 999999995544 6899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 157 (260)
T cd06606 125 RDIKGANILVDSDGVVKLADFGCAKRLGDIETG----------------------------------------------- 157 (260)
T ss_pred cCCCHHHEEEcCCCCEEEcccccEEeccccccc-----------------------------------------------
Confidence 999999999999999999999987433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++||||||+++|+|
T Consensus 158 -----------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l 196 (260)
T cd06606 158 -----------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM 196 (260)
T ss_pred -----------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence 000013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||.........+..+......+..+. ......+|+.+||..+|.+||++.++++||||
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 197 ATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99 55544433333333333222222222 23455599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=238.58 Aligned_cols=201 Identities=17% Similarity=0.204 Sum_probs=149.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+|++++++ ++. ....+++++|+ .|++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 49 EAKVMMKLSHPNLVQLYG-VCT---KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred HHHHHHhCCCCCEEEEEE-EEc---CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 455788899999999877 442 22356677776 5999999996544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++........ +
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------------~ 157 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-----------------------------------------------S 157 (256)
T ss_pred cccHhhEEECCCCcEEECCcccceeccccccc-----------------------------------------------c
Confidence 99999999999999999999987433211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 158 ------------------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 158 ------------------------------------------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred ------------------------------------------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHh
Confidence 00012345799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....+.......+...+++.+||..+|++|||+.++++.
T Consensus 196 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 196 SEGKMPYERFSN-SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ccCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 7 4543332 22333333332222222234456699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=242.53 Aligned_cols=202 Identities=19% Similarity=0.184 Sum_probs=149.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------------CCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------------~~l~~~~~~~i~~qil~ 93 (712)
++..++..+.|||++++++ ++. ....+++++|+ .+++|.+++.... ..+++..++.++.||+.
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~ 131 (288)
T cd05093 56 REAELLTNLQHEHIVKFYG-VCV---EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131 (288)
T ss_pred HHHHHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 3555788899999999887 443 23456667666 6899999985322 24899999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++||+||||||+||+++.++.++++|||.+........ .
T Consensus 132 aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-- 176 (288)
T cd05093 132 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY---------------------------------Y-- 176 (288)
T ss_pred HHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce---------------------------------e--
Confidence 99999999999999999999999999999999998843211100 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
.......++..|+|||.+.+..++.++
T Consensus 177 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~s 203 (288)
T cd05093 177 -----------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTES 203 (288)
T ss_pred -----------------------------------------------------ecCCCCCccccccCHHHhccCCCCchh
Confidence 000002357789999999888899999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|+|++ ||...... .....+.....+.......+...+|+.+||+.+|.+|||+.+++.
T Consensus 204 DiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 204 DVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999997 44333222 233333333333222223445669999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=241.52 Aligned_cols=202 Identities=18% Similarity=0.196 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
.+..++..++||||+++++ ++... ...++++++ .+++|.+++... ...+++..++.++.|
T Consensus 57 ~e~~~~~~l~h~~iv~~~~-~~~~~---~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 132 (283)
T cd05091 57 HEAMMRSRLQHPNIVCLLG-VVTKE---QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132 (283)
T ss_pred HHHHHHhcCCCCCcCeEEE-EEcCC---CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 3445778899999999887 44222 345566665 689999998321 224788889999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 133 l~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------- 180 (283)
T cd05091 133 IAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------------------------- 180 (283)
T ss_pred HHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe--------------------------------
Confidence 999999999999999999999999999999999999987533111000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......+++.|+|||.+.+..++
T Consensus 181 ------------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~ 204 (283)
T cd05091 181 ------------------------------------K--------------------LMGNSLLPIRWMSPEAIMYGKFS 204 (283)
T ss_pred ------------------------------------e--------------------eccCccCCccccCHHHHhcCCCC
Confidence 0 00002357789999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||..... ......+.....++..........+++..||+.+|.+||++.+|++
T Consensus 205 ~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 205 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99999999999999997 4443322 2334444443333222223334559999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=238.45 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=146.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++.++. .....++++|+ .+++|.+++.+.. ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (256)
T cd05082 48 AEASVMTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFV 124 (256)
T ss_pred HHHHHHHhCCCCCeeeEEEEEEc---CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 34557888999999998873332 22345667776 5889999995433 3478999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+|++|||++.......
T Consensus 125 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 156 (256)
T cd05082 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------------------------------------------------ 156 (256)
T ss_pred ccccchheEEEcCCCcEEecCCccceeccccC------------------------------------------------
Confidence 99999999999999999999999874321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
....++..|+|||.+.+..++.++|||||||++|+
T Consensus 157 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~ 191 (256)
T cd05082 157 ---------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ---------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHH
Confidence 00123557999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 192 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 192 IYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHhCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 986 454322 22233333333222222223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=236.85 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++|||++++++ ++.. ...+++++++ .|++|.+++......+++..++.++.||+.||+|||++||+||
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05114 49 EAKVMMKLSHPKLVQLYG-VCTQ---QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124 (256)
T ss_pred HHHHHHHCCCCCceeEEE-EEcc---CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445788899999999887 4432 3457777777 5899999996544458999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++........
T Consensus 125 dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05114 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT------------------------------------------------ 156 (256)
T ss_pred ccCcceEEEcCCCeEEECCCCCccccCCCcee------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 157 -----------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred -----------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHH
Confidence 000022456799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....+...........+++.+||..+|.+||++.++++
T Consensus 196 ~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 196 TEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred cCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8 45433322 333333333222222222344569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=236.69 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+||+.+++ .. .....+++++|+ .+++|.+++.+.. .+++..++.++.||+.||.|||+.||+|
T Consensus 48 ~e~~~~~~l~~~~i~~~~~-~~---~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~i~H 122 (264)
T cd06626 48 DEMKVLELLKHPNLVKYYG-VE---VHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSHGIVH 122 (264)
T ss_pred HHHHHHHhCCCCChhheee-eE---ecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445788899999999887 32 233456777777 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++..........+ .
T Consensus 123 ~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~-----------------------------~--------------- 158 (264)
T cd06626 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG-----------------------------E--------------- 158 (264)
T ss_pred CCCCHHHEEECCCCCEEEcccccccccCCCCCccc-----------------------------c---------------
Confidence 99999999999999999999998854322100000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
......++..|+|||.+.+.. ++.++|||||||++
T Consensus 159 ------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il 196 (264)
T cd06626 159 ------------------------------------------EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV 196 (264)
T ss_pred ------------------------------------------cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHH
Confidence 000034678899999998766 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||............+.....+..... ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 197 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 197 LEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99998 66544322222222222222211111 24555699999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=236.07 Aligned_cols=202 Identities=18% Similarity=0.261 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|+|++.+++ .+... ...++++++ .|++|.+++......+++..+..++.||+.||.|||..|++|
T Consensus 46 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 46 NEIQILKKCKHPNIVKYYG-SYLKK---DELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHHHHhCCCCCEeEEEE-EEecC---CeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 4455788899999999887 44222 445666666 679999999665456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++|+|||.+...+....
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------ 153 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKA------------------------------------------------ 153 (253)
T ss_pred CCCCHHHEEEccCCeEEEeecccccccccccc------------------------------------------------
Confidence 99999999999999999999998744322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+..++.++|+||||+++|+|
T Consensus 154 -------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l 190 (253)
T cd05122 154 -------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL 190 (253)
T ss_pred -------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHH
Confidence 0013568889999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc--CchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
++ ||........... ......+...... .....+++.+||..+|++|||+.++++|||
T Consensus 191 ~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 191 AEGKPPYSELPPMKALFK-IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HhCCCCCCCCchHHHHHH-HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99 5544322222222 2222222221111 344569999999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=238.99 Aligned_cols=207 Identities=22% Similarity=0.231 Sum_probs=158.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
.+...+..+.|+|++++++ ++.. ...+++++++ .+++|.+++... ..+++..+..++.||++||+|||+ +|++
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~ 122 (264)
T cd06623 48 RELKTLRSCESPYVVKCYG-AFYK---EGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHII 122 (264)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEcc---CCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 4445677788999999887 4422 2456666666 679999999554 458999999999999999999999 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.........
T Consensus 123 H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---------------------------------------------- 156 (264)
T cd06623 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ---------------------------------------------- 156 (264)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceecccCCCc----------------------------------------------
Confidence 9999999999999999999999987433111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|+||||+++|+
T Consensus 157 --------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~ 192 (264)
T cd06623 157 --------------------------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLE 192 (264)
T ss_pred --------------------------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHH
Confidence 001356888999999988889999999999999999
Q ss_pred hhC---CCCCCh--hhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||.... ........+.....+..... ......+++.+||..+|++|||+.++++||||+..
T Consensus 193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 193 CALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999 554432 33334444444333333333 23455599999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=242.23 Aligned_cols=201 Identities=19% Similarity=0.201 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQI 91 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi 91 (712)
+...++.++|+||+++++ ++. ....+++++++ .+++|.+++... ...+++..++.++.||
T Consensus 57 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 132 (291)
T cd05094 57 EAELLTNLQHEHIVKFYG-VCG---DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132 (291)
T ss_pred HHHHHhcCCCCCcceEEE-EEc---cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHH
Confidence 445688899999999887 443 23456777776 699999999432 1347889999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++++|||++.........
T Consensus 133 ~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~--------------------------------- 179 (291)
T cd05094 133 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY--------------------------------- 179 (291)
T ss_pred HHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee---------------------------------
Confidence 99999999999999999999999999999999999988433211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.......++..|+|||.+.+..++.
T Consensus 180 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 204 (291)
T cd05094 180 -------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTT 204 (291)
T ss_pred -------------------------------------------------------ecCCCCCcceeecChHHhccCCCCc
Confidence 0000134578899999999888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||++|||++ ||...... .....+.....+...........+++.+||+.+|.+|||+.++++
T Consensus 205 ~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 205 ESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999999999999997 44333322 233333343333222223345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=237.67 Aligned_cols=207 Identities=16% Similarity=0.150 Sum_probs=153.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++++++ .+.+ .....+++++|+ .+++|.+++...+ .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~ei~~l~~l~h~~i~~~~~-~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H 129 (264)
T cd06653 53 CEIQLLKNLRHDRIVQYYG-CLRD-PEEKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVH 129 (264)
T ss_pred HHHHHHHHcCCCCcceEEE-EEEc-CCCCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 4556888999999999887 3322 223446666666 6899999985544 3889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||+++........ +.
T Consensus 130 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 164 (264)
T cd06653 130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMS-------------------------------GT-------------- 164 (264)
T ss_pred CCCCHHHEEEcCCCCEEECcccccccccccccc-------------------------------Cc--------------
Confidence 999999999999999999999988532110000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 165 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 202 (264)
T cd06653 165 ------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202 (264)
T ss_pred ------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............ .....++..+.. .+...+++.+||. +|..|||+.+++.|||.
T Consensus 203 ~~g~~p~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 203 LTEKPPWAEYEAMAAIFKI-ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HhCCCCCCccCHHHHHHHH-HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 98 55443333333322 222222223333 3455699999999 57999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=246.27 Aligned_cols=223 Identities=17% Similarity=0.183 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+|++.+++ ++. ....+++++|+.+++|.+++... ..+++..+..++.||+.||.|||+.||+|+
T Consensus 69 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~ 143 (335)
T PTZ00024 69 RELKIMNEIKHENIMGLVD-VYV---EGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHR 143 (335)
T ss_pred HHHHHHHhCCCcceeeeeE-EEe---cCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 3455788899999999888 442 33578899999888999999544 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+.......... +.+.
T Consensus 144 dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~------------- 184 (335)
T PTZ00024 144 DLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM------------- 184 (335)
T ss_pred cccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc-------------
Confidence 9999999999999999999998865543211100000 0000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
..........++..|+|||.+.+.. ++.++|||||||++|+|
T Consensus 185 -------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 185 -------------------------------------QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred -------------------------------------cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 0000001134688999999987654 79999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---cC--------------------CCchh----hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---RV--------------------LPPQL----LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~~--------------------~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||...... ..+..+.. .. .+... ........++|.+||..+|++|||
T Consensus 228 ~tg~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s 306 (335)
T PTZ00024 228 LTGKPLFPGENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS 306 (335)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC
Confidence 99 44433322 22211111 00 00101 111234459999999999999999
Q ss_pred HHHHhcCcCCCCCcCc
Q 005147 316 MGELLQSEFLNEPRDS 331 (712)
Q Consensus 316 ~~eiL~hp~~~~~~~~ 331 (712)
++++|.||||+.....
T Consensus 307 ~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 307 AKEALKHEYFKSDPLP 322 (335)
T ss_pred HHHHhcCcccCCCCCC
Confidence 9999999999976543
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=244.15 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=144.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------------------CCCChhHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECLHIF 88 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------------------~~l~~~~~~~i~ 88 (712)
+..+|..+.||||+++++ ++.+ ...+++++|+ .+++|.+++.... ..+++.++..|+
T Consensus 69 E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (304)
T cd05096 69 EVKILSRLKDPNIIRLLG-VCVD---EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVA 144 (304)
T ss_pred HHHHHhhcCCCCeeEEEE-EEec---CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHH
Confidence 445688899999999888 4432 2457778877 5899999883321 236778899999
Q ss_pred HHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccc
Q 005147 89 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168 (712)
Q Consensus 89 ~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (712)
.||+.||.|||++||+||||||+||+++.++.+|++|||+++.......
T Consensus 145 ~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~------------------------------- 193 (304)
T cd05096 145 LQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY------------------------------- 193 (304)
T ss_pred HHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce-------------------------------
Confidence 9999999999999999999999999999999999999998843211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC
Q 005147 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 248 (712)
Q Consensus 169 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 248 (712)
+ . ......++..|+|||++.+..
T Consensus 194 --~-----------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~ 216 (304)
T cd05096 194 --Y-----------------------------------R--------------------IQGRAVLPIRWMAWECILMGK 216 (304)
T ss_pred --e-----------------------------------E--------------------ecCcCCCCccccCHHHHhcCC
Confidence 0 0 000124577899999998888
Q ss_pred CCCccchHHHHHHHHHhhC-----CCCCChhhHHHHHhh----cc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCH
Q 005147 249 VSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 249 ~~~~sDIwSlGvll~eLl~-----pf~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
++.++|||||||++|||++ ||...... ...... .. ...+...........+|+.+||..+|++|||+
T Consensus 217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred CCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 9999999999999999985 45433221 111111 11 11111112223445699999999999999999
Q ss_pred HHHhc
Q 005147 317 GELLQ 321 (712)
Q Consensus 317 ~eiL~ 321 (712)
.+|.+
T Consensus 296 ~~i~~ 300 (304)
T cd05096 296 SDIHA 300 (304)
T ss_pred HHHHH
Confidence 99954
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=242.06 Aligned_cols=209 Identities=18% Similarity=0.237 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ ++. ....+++++|+.+++|.+++.. ....+++..+..++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 50 REISLLKEMQHGNIVRLQD-VVH---SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred HHHHHHHhccCCCEeeEEE-EEe---cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 3556788899999999888 442 2357888899988899988844 3333678888999999999999999999999
Q ss_pred ccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|+||+++. ++.+|++|||++...+....
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVR----------------------------------------------- 158 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccCCCcc-----------------------------------------------
Confidence 999999999985 56799999998844321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~ 195 (294)
T PLN00009 159 -------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA 195 (294)
T ss_pred -------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568899999998764 4789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc--c--------------------C-CCch----hhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH--R--------------------V-LPPQ----LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~--~--------------------~-~~~~----~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............... . . .+.. .....+...+++.+||..+|++|
T Consensus 196 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (294)
T PLN00009 196 EMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKR 275 (294)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhC
Confidence 9999 45443332222221110 0 0 0000 01123445589999999999999
Q ss_pred CCHHHHhcCcCCCCCc
Q 005147 314 PKMGELLQSEFLNEPR 329 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~ 329 (712)
|++.++++||||....
T Consensus 276 ps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 276 ITARAALEHEYFKDLG 291 (294)
T ss_pred cCHHHHhcCchHhHHh
Confidence 9999999999998754
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=240.86 Aligned_cols=206 Identities=17% Similarity=0.156 Sum_probs=153.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..++..++|||++++++ .+... ..+++++|| .+++|.+++.+.+ .+++..++.++.|++.+|.|||+ .||+
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~i~ 126 (284)
T cd06620 52 RELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVHRIM 126 (284)
T ss_pred HHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 4455788899999999888 44222 456777777 6889999885543 48999999999999999999997 6999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++......
T Consensus 127 H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~------------------------------------------------- 157 (284)
T cd06620 127 HRDIKPSNILVNSRGQIKLCDFGVSGELINS------------------------------------------------- 157 (284)
T ss_pred ccCCCHHHEEECCCCcEEEccCCcccchhhh-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~ 194 (284)
T cd06620 158 -------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIE 194 (284)
T ss_pred -------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred hhC---CCCCChhh----------HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||...... ......+.....+..... ..+...+|+.+||..||.+|||+.|+++|+||....
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 195 LALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred HHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 998 55433221 111122222211211112 223455999999999999999999999999987643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=243.43 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=153.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+.|||++.+++ .+.. ....++++|+ .+++|.+++.+. .+++.+++.++.||+.||.|||++|++|+
T Consensus 66 e~~~l~~l~hp~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~ 139 (293)
T cd06647 66 EILVMRENKHPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHR 139 (293)
T ss_pred HHHHHhhcCCCCeeehhh-eeee---CCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 445678899999999887 4422 2345666666 699999999543 37899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 140 dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------- 170 (293)
T cd06647 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------- 170 (293)
T ss_pred cCCHHHEEEcCCCCEEEccCcceeccccccc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|+|||||++|+|+
T Consensus 171 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll 209 (293)
T cd06647 171 -----------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209 (293)
T ss_pred -----------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch-hh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ-LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+ ||.......... .+.....+.. .. ...+...+++.+||..+|.+||++.+++.|+||.....
T Consensus 210 ~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 210 EGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred hCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 9 555433322111 1111111111 11 12234558999999999999999999999999997764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=227.38 Aligned_cols=214 Identities=15% Similarity=0.147 Sum_probs=143.9
Q ss_pred cceeeccCCCCCccccccccccccc-ccC-ceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA-AID-PFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~-~~~-~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+.-.-+..+|||++++++-...... ... .|++..+|..|||.+.+. ..+..+++.++++||.+|++||.+||+..
T Consensus 68 Eid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~ 147 (302)
T KOG2345|consen 68 EIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE 147 (302)
T ss_pred HHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 3334566899999998873332222 222 455555668999999882 34446899999999999999999999998
Q ss_pred --ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 103 --IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 103 --IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
++||||||.||+++.++.+++.|||++......-
T Consensus 148 ~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i-------------------------------------------- 183 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI-------------------------------------------- 183 (302)
T ss_pred CcccccCCCcceeEecCCCceEEEeccCccccceEe--------------------------------------------
Confidence 9999999999999999999999999985421110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYR 257 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwS 257 (712)
....+...+.|. ....-|..|+|||.+.-. ..+.++||||
T Consensus 184 -------------------~~~~~a~~lQe~------------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWS 226 (302)
T KOG2345|consen 184 -------------------EGSRQALRLQEW------------------AEERCTIPYRAPELFNVKSHCTITERTDIWS 226 (302)
T ss_pred -------------------echHHHHHHHHH------------------HHHhCCCcccCchheecccCcccccccchhh
Confidence 000000000000 001237889999998543 3789999999
Q ss_pred HHHHHHHhhC---CCCCChhhH--HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 258 LGVLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||+||+|+. ||......- .+..........|..........++|.+||+.||.+||++.+++.+
T Consensus 227 LGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 227 LGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred hhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 9999999987 665322210 0111111111112222233344599999999999999999999863
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=234.91 Aligned_cols=202 Identities=16% Similarity=0.132 Sum_probs=150.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+...++.++|||++.+++ .+.. ..+++++|+ .+++|.+++.+.. ..+++..+..++.||+.||+|||++|++
T Consensus 45 ~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 119 (257)
T cd05040 45 KEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFI 119 (257)
T ss_pred HHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556788999999999887 4422 556777777 5899999995543 4689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++...+..... +
T Consensus 120 H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------------- 154 (257)
T cd05040 120 HRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y------------- 154 (257)
T ss_pred ccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e-------------
Confidence 9999999999999999999999988543221000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 155 ----------------------~--------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~e 192 (257)
T cd05040 155 ----------------------V--------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWE 192 (257)
T ss_pred ----------------------e--------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHH
Confidence 0 0001345778999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+.. ...........+...+++.+||..+|++|||+.++++
T Consensus 193 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 193 MFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 987 44333222 22222222 1111111122345559999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=238.93 Aligned_cols=206 Identities=16% Similarity=0.212 Sum_probs=148.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.+.|+||+.+++ ++.. ...+++++|+.++++.+.+......+++.++..++.||+.||.|||++||+|+
T Consensus 49 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 124 (288)
T cd07833 49 REVKVLRQLRHENIVNLKE-AFRR---KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHR 124 (288)
T ss_pred HHHHHHHhcCCCCeeehhh-eEEE---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3455778899999999888 4422 34578888886555555443333448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 125 dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~------------------------------------------------- 155 (288)
T cd07833 125 DIKPENILVSESGVLKLCDFGFARALRARPA------------------------------------------------- 155 (288)
T ss_pred CCCHHHeEECCCCCEEEEeeecccccCCCcc-------------------------------------------------
Confidence 9999999999999999999998743321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
.......++.+|+|||++.+. .++.++||||||+++|+|
T Consensus 156 ----------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l 195 (288)
T cd07833 156 ----------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAEL 195 (288)
T ss_pred ----------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHH
Confidence 000014578899999999888 789999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--cc------------------CCCc---------hhhhc-CchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~------------------~~~~---------~~~~~-~~~~~~li~~~L~~dP~~ 312 (712)
++ ||.............. .. ..+. ..... .+...+|+.+||..+|.+
T Consensus 196 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 275 (288)
T cd07833 196 LDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKE 275 (288)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchh
Confidence 99 4443322211111000 00 0000 01111 244559999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.++++||||
T Consensus 276 Rps~~~il~~~~f 288 (288)
T cd07833 276 RLTCDELLQHPYF 288 (288)
T ss_pred cccHHHHhcCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=235.66 Aligned_cols=204 Identities=18% Similarity=0.226 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++++++ .+.. ...+++++|+ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+
T Consensus 48 ~E~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (257)
T cd08225 48 KEVILLAKMKHPNIVTFFA-SFQE---NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123 (257)
T ss_pred HHHHHHHhCCCCChhhhhh-eecc---CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4555788899999999887 4422 2356677766 59999999944 333579999999999999999999999999
Q ss_pred eccCCCCceeecCCCc-EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~~-vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||||+||+++.++. ++++|||.+...+... +.
T Consensus 124 H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~------------ 158 (257)
T cd08225 124 HRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM---------------------------------EL------------ 158 (257)
T ss_pred cccCCHHHEEEcCCCCeEEecccccchhccCCc---------------------------------cc------------
Confidence 9999999999987754 6999998774321110 00
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....|++.|+|||.+.+..++.++|+|||||++|
T Consensus 159 ---------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~ 193 (257)
T cd08225 159 ---------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLY 193 (257)
T ss_pred ---------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00134788899999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++ ||......... ........++..........+++.+||..+|++|||+.++++||||
T Consensus 194 ~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 194 ELCTLKHPFEGNNLHQLV-LKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHhCCCCCCCccHHHHH-HHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9998 55443332222 2233333333222233456699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=240.49 Aligned_cols=203 Identities=18% Similarity=0.115 Sum_probs=144.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++|||++++++ ++.. .....+++++|+ .+++|.+++... .+++.+++.++.||+.||+|||++||+||
T Consensus 56 E~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~ 131 (283)
T cd05080 56 EINILKTLYHENIVKYKG-CCSE-QGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHR 131 (283)
T ss_pred HHHHHHhCCCCCEeeEEE-EEec-CCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 445788999999999887 4432 233446666666 689999999543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++........ +
T Consensus 132 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~--------------- 164 (283)
T cd05080 132 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y--------------- 164 (283)
T ss_pred ccChheEEEcCCCcEEEeecccccccCCcchh--------------------------------h---------------
Confidence 99999999999999999999988543211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.. .....++..|+|||.+.+..++.++|||||||++|||+
T Consensus 165 --------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~ 204 (283)
T cd05080 165 --------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204 (283)
T ss_pred --------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH
Confidence 00 00012456799999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHH--------------hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMS--------------SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |+.........+. .+.....++..........+++.+||..+|++|||+.++++
T Consensus 205 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 205 THCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 8 4332111111000 00011111111112345559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=238.63 Aligned_cols=208 Identities=15% Similarity=0.194 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++...|+.++|+|++.+++ .+.. ...+++++++ .|++|.+++... ...+++..++.++.||+.||.|||++||
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i 123 (267)
T cd06610 48 KEVQAMSQCNHPNVVKYYT-SFVV---GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123 (267)
T ss_pred HHHHHHHhcCCCCEEEEEE-EEee---CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3344678899999999877 3322 2355666666 689999999442 2458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+|+||+|+||+++.++.++++|||++.........
T Consensus 124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------------------- 158 (267)
T cd06610 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR--------------------------------------------- 158 (267)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc---------------------------------------------
Confidence 99999999999999999999999987433211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
. .. ......|+..|+|||.+... .++.++|+|||||++
T Consensus 159 ----------------------~------------------~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~ 197 (267)
T cd06610 159 ----------------------T------------------RK-VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITA 197 (267)
T ss_pred ----------------------c------------------cc-ccccccCChhhcChHHHccccCcCcccchHhHhHHH
Confidence 0 00 00114578899999998777 689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh-----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||............+.. ..+... ....+...+++.+||..+|.+|||+.++++||||
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 198 IELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999 55433332222222222 111110 1122445699999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=241.94 Aligned_cols=202 Identities=16% Similarity=0.177 Sum_probs=149.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---------------CCCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---------------~~~~l~~~~~~~i~~q 90 (712)
+..++..+ +|+||+++++ ++.. ...+++++|+ .+++|.+++.. ....+++..++.++.|
T Consensus 65 E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 140 (293)
T cd05053 65 EMEMMKMIGKHKNIINLLG-VCTQ---EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQ 140 (293)
T ss_pred HHHHHHhhcCCCCeeeEEE-EEcC---CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 33456666 8999999887 4432 2356777776 68999999842 2345889999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+.||+||||||+||+++.++.++++|||.++........
T Consensus 141 i~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------- 188 (293)
T cd05053 141 VARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------------------------- 188 (293)
T ss_pred HHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce--------------------------------
Confidence 999999999999999999999999999999999999988543211000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......++..|+|||.+.+..++
T Consensus 189 -------------~-------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 212 (293)
T cd05053 189 -------------R-------------------------------------------KTTNGRLPVKWMAPEALFDRVYT 212 (293)
T ss_pred -------------e-------------------------------------------ccCCCCCCccccCHHHhccCCcC
Confidence 0 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||++|||++ ||.... .......+.....+.......+...+|+.+||..+|++|||+.+++++
T Consensus 213 ~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 213 HQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred cccceeehhhHHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 99999999999999986 554332 223344444443333333344566699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=234.72 Aligned_cols=204 Identities=21% Similarity=0.273 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|+|++.+++.+. .. ..+++++++ .|++|.+++... ...+++.++..++.||+.||.|||++|
T Consensus 48 ~e~~~l~~l~~~~~~~~~~~~~-~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 48 NEVKILKKLNHPNIIKYYESFE-EK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred HHHHHHHhcCCCChhheEEEEe-cC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445688899999999887333 22 556677776 588999999543 356899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||.+...+....
T Consensus 124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 158 (258)
T cd08215 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--------------------------------------------- 158 (258)
T ss_pred EecccCChHHeEEcCCCcEEECCccceeecccCcc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|+||+|+++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~ 193 (258)
T cd08215 159 ---------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVL 193 (258)
T ss_pred ---------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||.... .............++..........+++.+||..+|.+|||+.++|+||||
T Consensus 194 ~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 194 YELCTLKHPFEGEN-LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHcCCCCCCCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999 554333 223333333333332222233455599999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=238.29 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|||++.+++ .+.. ...+++++++ .+++|.+++. .....+++..++.++.||+.||.|||++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08228 51 KEIDLLKQLNHPNVIKYLD-SFIE---DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126 (267)
T ss_pred HHHHHHHhCCCcceeeeee-eEEE---CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4556788999999999888 4422 2355666666 6789998883 23345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+........
T Consensus 127 i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08228 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred eeCCCCCHHHEEEcCCCCEEECccccceeccchhH---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 162 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l 196 (267)
T cd08228 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChh-hHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... .......+.....++...... ....+++.+||..+|.+||++.++++
T Consensus 197 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 197 YEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 99998 5544322 223333344434444433333 44569999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=239.93 Aligned_cols=208 Identities=13% Similarity=0.109 Sum_probs=152.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------CCCChhHHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qil~~l~~ 97 (712)
+..+++.++||||+++++ ++.. ....++++|+ .+++|.+++.+.. ..++...++.++.||+.||.|
T Consensus 59 e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 134 (288)
T cd05061 59 EASVMKGFTCHHVVRLLG-VVSK---GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 134 (288)
T ss_pred HHHHHHhCCCCCeeeEEE-EEcC---CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 445788899999999887 4422 2356777776 6899999994321 224567889999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||+||+++.++.++++|||+++........
T Consensus 135 lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~--------------------------------------- 175 (288)
T cd05061 135 LNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------------------------------------- 175 (288)
T ss_pred HHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccc---------------------------------------
Confidence 99999999999999999999999999999987532111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......++..|+|||.+.+..++.++||||
T Consensus 176 -------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvws 206 (288)
T cd05061 176 -------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWS 206 (288)
T ss_pred -------------------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHH
Confidence 0000023467799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc------CcCCCC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFLNE 327 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~------hp~~~~ 327 (712)
|||++|||++ ||..... ......+.....+.......+...+++.+||+.+|.+|||+.++++ ||||.+
T Consensus 207 lG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 207 FGVVLWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 9999999987 5543322 2333333333333222223355669999999999999999999987 888876
Q ss_pred C
Q 005147 328 P 328 (712)
Q Consensus 328 ~ 328 (712)
.
T Consensus 286 ~ 286 (288)
T cd05061 286 V 286 (288)
T ss_pred C
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=246.21 Aligned_cols=215 Identities=17% Similarity=0.184 Sum_probs=154.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+ +||||+++++ ++.. .....+++++|+.+++|.+++... .+++..++.++.||+.||.|||+.||+|
T Consensus 55 ~E~~~l~~l~~h~ni~~~~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H 130 (337)
T cd07852 55 REIMFLQELGDHPNIVKLLN-VIKA-ENDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIH 130 (337)
T ss_pred HHHHHHHHhcCCCCccceee-eecc-CCCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 355677888 9999999888 4422 223457888899888999998554 5889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------- 163 (337)
T cd07852 131 RDLKPSNILLNSDCRVKLADFGLARSLSELEEN----------------------------------------------- 163 (337)
T ss_pred CCCCHHHEEEcCCCcEEEeeccchhcccccccc-----------------------------------------------
Confidence 999999999999999999999988543111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
+ ..+ ......|+.+|+|||.+.+ ..++.++|||||||++|+
T Consensus 164 ~-------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~e 205 (337)
T cd07852 164 P-------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE 205 (337)
T ss_pred c-------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHHHH
Confidence 0 000 0011467999999998865 448899999999999999
Q ss_pred hhC---CCCCChhhHHHHHh--------------------------hcccCC--Cch-hhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSS--------------------------LRHRVL--PPQ-LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~--------------------------~~~~~~--~~~-~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||............ +..... ... .........++|.+||+.+|.+
T Consensus 206 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~ 285 (337)
T cd07852 206 MLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNK 285 (337)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccc
Confidence 999 45432211110000 000000 011 1112344559999999999999
Q ss_pred CCCHHHHhcCcCCCCCcC
Q 005147 313 RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+.++++||||+....
T Consensus 286 Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 286 RLTAEEALEHPYVAQFHN 303 (337)
T ss_pred ccCHHHHhhChhhhhhcc
Confidence 999999999999987644
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=239.04 Aligned_cols=202 Identities=13% Similarity=0.144 Sum_probs=145.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------CCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..+++.++|+||+++++..+ . ...+++++|+ .|++|.+++.... ..+++..++.++.||+.||.|||+
T Consensus 59 e~~~l~~l~~~~i~~~~~~~~-~---~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 134 (277)
T cd05036 59 EALIMSKFNHQNIVRLIGVSF-E---RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE 134 (277)
T ss_pred HHHHHHhCCCCCEeeEEEEEc-c---CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999888333 2 2345666666 6999999994332 248899999999999999999999
Q ss_pred cCceeccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 101 QGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
+|++||||||+||+++..+ .++++|||+++....... ++
T Consensus 135 ~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~~----- 176 (277)
T cd05036 135 NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY---------------------------------YR----- 176 (277)
T ss_pred CCEeecccchheEEEeccCCCcceEeccCccccccCCccc---------------------------------ee-----
Confidence 9999999999999998654 589999998854311100 00
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......+..|+|||++.+..++.++||||
T Consensus 177 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws 206 (277)
T cd05036 177 --------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWS 206 (277)
T ss_pred --------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHH
Confidence 000012356799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||++|||++ ||...... ..+..+.....+.......+...+++.+||..+|++|||+.++++|
T Consensus 207 lG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 207 FGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999986 56543322 2222222222222122223455599999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=238.53 Aligned_cols=206 Identities=19% Similarity=0.219 Sum_probs=152.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..++..++|+|++.+++ ++... .....++++++.+++|.+++......+++.+++.++.||+.||+|||++|++|+|
T Consensus 48 e~~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~d 125 (287)
T cd07840 48 EIKLLQKLRHPNIVRLKE-IVTSK-GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRD 125 (287)
T ss_pred HHHHHHhccCCCeeehee-eEecC-CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 445778889999999888 44322 1356788888877799999966545699999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+.........
T Consensus 126 l~p~nil~~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------- 156 (287)
T cd07840 126 IKGSNILINNDGVLKLADFGLARPYTKRNSA------------------------------------------------- 156 (287)
T ss_pred CcHHHeEEcCCCCEEEccccceeeccCCCcc-------------------------------------------------
Confidence 9999999999999999999987433211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+. .++.++|||||||++|||+
T Consensus 157 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 196 (287)
T cd07840 157 ----------------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF 196 (287)
T ss_pred ----------------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence 00013457889999987654 4789999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC-------------------------CCc----hhhhc-CchhHHHHHHcCCCCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV-------------------------LPP----QLLLK-FPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~-------------------------~~~----~~~~~-~~~~~~li~~~L~~dP~~R 313 (712)
+ ||...... .....+.... .+. .+... .+...+++.+||..+|.+|
T Consensus 197 t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (287)
T cd07840 197 LGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKR 275 (287)
T ss_pred hCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhC
Confidence 9 55443322 1111111100 000 01111 3445599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.++++||||
T Consensus 276 p~~~~~l~~~~~ 287 (287)
T cd07840 276 ISADQALQHEYF 287 (287)
T ss_pred cCHHHHhhCcCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=238.43 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-------------CCCChhHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-------------~~l~~~~~~~i~~qil~ 93 (712)
+..+|..++|+|++.+++ ++... ..+++++++ .|++|.++|...+ ..+++.++..++.||+.
T Consensus 58 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 133 (280)
T cd05049 58 EAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIAS 133 (280)
T ss_pred HHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHH
Confidence 445788899999999888 44222 456777766 6999999994332 34788899999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||.|||++||+||||||+||+++.++.++++|||++....... .+.
T Consensus 134 ~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~~- 179 (280)
T cd05049 134 GMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------YYR- 179 (280)
T ss_pred HHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------cee-
Confidence 9999999999999999999999999999999999874321110 000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
......++..|+|||.+.+..++.++
T Consensus 180 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 205 (280)
T cd05049 180 ------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTES 205 (280)
T ss_pred ------------------------------------------------------cCCCCcccceecChhhhccCCcchhh
Confidence 00002356789999999999999999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|||++ ||..... ......+.....+...........+++.+||..+|.+|||+.|+++
T Consensus 206 Di~slG~il~e~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 206 DVWSFGVVLWEIFTYGKQPWYGLSN-EEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999996 5543332 2333333343333322233345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=238.91 Aligned_cols=206 Identities=17% Similarity=0.237 Sum_probs=152.6
Q ss_pred ccceeeccC---CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~---~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.+ .|||++++++ .+. ....+++++++ .|++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~~~~~~~vi~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 48 REVALLSQLRQSQPPNITKYYG-SYL---KGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred HHHHHHHHhccCCCCCeeeEee-eee---eCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 344455555 4999999887 442 23456777776 689999998543 5899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||+|+||+++.++.++++|||.+........
T Consensus 122 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 156 (277)
T cd06917 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--------------------------------------------- 156 (277)
T ss_pred cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc---------------------------------------------
Confidence 99999999999999999999999998743321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvl 261 (712)
......|+..|+|||.+.++ .++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 191 (277)
T cd06917 157 ---------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGIT 191 (277)
T ss_pred ---------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHH
Confidence 00013578899999998654 47899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||...... .....+... .++.+.. ..+...+++.+||..+|.+||++.+++.|+||+....
T Consensus 192 l~~ll~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 192 IYEMATGNPPYSDVDAF-RAMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred HHHHHhCCCCCCCCChh-hhhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 999999 55433322 222222222 2222222 2345569999999999999999999999999977543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-26 Score=237.55 Aligned_cols=204 Identities=20% Similarity=0.263 Sum_probs=150.5
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++...+..+. |+|++.+++ ++.+ ....++++|+.+++|.+++.... ..+++.+++.++.||+.+|.|||++||+
T Consensus 46 ~e~~~l~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 121 (283)
T cd07830 46 REVKSLRKLNEHPNIVKLKE-VFRE---NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFF 121 (283)
T ss_pred HHHHHHHhccCCCCchhHHH-Hhhc---CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3445667777 999999888 4433 45778888888999999885443 4589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.......
T Consensus 122 H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~------------------------------------------------ 153 (283)
T cd07830 122 HRDLKPENLLVSGPEVVKIADFGLAREIRSRP------------------------------------------------ 153 (283)
T ss_pred cCCCChhhEEEcCCCCEEEeecccceeccCCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......++..|+|||++.+. .++.++|+||||+++|
T Consensus 154 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~ 190 (283)
T cd07830 154 -------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMA 190 (283)
T ss_pred -------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHH
Confidence 00013568899999988544 4899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhc--c------------------cCCC----ch----hhhcCchhHHHHHHcCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLR--H------------------RVLP----PQ----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~--~------------------~~~~----~~----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
+|++ ||.............. . ...+ .. .....+...+|+.+||+.+|.+
T Consensus 191 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 270 (283)
T cd07830 191 ELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKK 270 (283)
T ss_pred HHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCccc
Confidence 9999 4433322111111100 0 0000 00 1112345569999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.|++.||||
T Consensus 271 Rpt~~ei~~~~~~ 283 (283)
T cd07830 271 RPTASQALQHPYF 283 (283)
T ss_pred CCCHHHHhhCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-26 Score=257.89 Aligned_cols=189 Identities=16% Similarity=0.216 Sum_probs=127.6
Q ss_pred ccCceEEEEee-CCccHHHhhcCCCCC-------------------CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 53 AIDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 53 ~~~~~~l~~e~-~g~sL~~~l~~~~~~-------------------l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
....++++++| .+++|.+++...... .....+..|+.||+.||+|||++||+||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 34467777777 588999988543211 1233467899999999999999999999999999
Q ss_pred eeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 113 FVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 113 Ill~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||++. .+.+|++|||+++...... +.
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~-------------------- 312 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY-------------------- 312 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccc---------------------------------cc--------------------
Confidence 99985 5789999999985421110 00
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----------------------C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------V 249 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~ 249 (712)
......+++.|+|||.+.... +
T Consensus 313 ------------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 313 ------------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred ------------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 001146788999999663222 3
Q ss_pred CCccchHHHHHHHHHhhCCCCCChhh-HHHHHhhcccCC-------------Cchhhh-------cCchhHHHHHHcCCC
Q 005147 250 SCASDIYRLGVLLFELFCPFSTGEEK-TRTMSSLRHRVL-------------PPQLLL-------KFPKEASFCLWLLHP 308 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~pf~~~~~~-~~~~~~~~~~~~-------------~~~~~~-------~~~~~~~li~~~L~~ 308 (712)
+.++|||||||+||||++|....... ......+..... .+.... ......+||.+||+.
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 45679999999999999854433322 222222111111 000000 001122799999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|||+.++|+||||+....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999987644
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-26 Score=235.02 Aligned_cols=200 Identities=18% Similarity=0.197 Sum_probs=147.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++++++ ++. ...+++++++ .+++|.++|.+.. .+++..++.++.||+.||+|||.+||+|+
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 119 (257)
T cd05060 46 EASVMAQLDHPCIVRLIG-VCK----GEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHR 119 (257)
T ss_pred HHHHHHhcCCCCeeeEEE-EEc----CCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 445788899999999887 442 2345677766 6889999995544 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++..+... .+ +
T Consensus 120 di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~--------------~ 152 (257)
T cd05060 120 DLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY--------------Y 152 (257)
T ss_pred CcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc--------------c
Confidence 999999999999999999999885432110 00 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. ......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 153 -------~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~ 192 (257)
T cd05060 153 -------R---------------------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192 (257)
T ss_pred -------c---------------------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHH
Confidence 0 000012356799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+......+......+...+++.+||..+|.+||++.++++
T Consensus 193 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 193 SYGAKPYGEMKG-AEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred cCCCCCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6 4433222 2333333333222222223345569999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=235.37 Aligned_cols=193 Identities=17% Similarity=0.197 Sum_probs=142.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++.+++ .+.. ...++++|+ .+++|.+++......++...++.+++||+.||+|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 124 (259)
T cd05037 50 ETASLMSQLSHKHLVKLYG-VCVR----DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVH 124 (259)
T ss_pred HHHHHHHcCCCcchhheee-EEec----CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 4445788999999999888 4422 234566666 689999999655446899999999999999999999999999
Q ss_pred ccCCCCceeecCCC-------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 106 HNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 106 rDLkP~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|||||+||+++..+ .++++|||++......
T Consensus 125 ~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------------- 161 (259)
T cd05037 125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR------------------------------------------- 161 (259)
T ss_pred ccCccceEEEecCccccCCceeEEeCCCCcccccccc-------------------------------------------
Confidence 99999999999777 7999999887432110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIY 256 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIw 256 (712)
....++..|+|||.+.+. .++.++|||
T Consensus 162 ---------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~ 190 (259)
T cd05037 162 ---------------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKW 190 (259)
T ss_pred ---------------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHH
Confidence 002456679999999877 689999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|+|++ ||...... ............+ ........+++.+||..+|.+|||+.++++
T Consensus 191 slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 191 SFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99999999987 33322211 1111111111111 111255669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-26 Score=236.41 Aligned_cols=206 Identities=14% Similarity=0.117 Sum_probs=149.8
Q ss_pred cceeeccCCCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+...++.++||||+++++..+.... .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||
T Consensus 51 e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH 130 (273)
T cd05035 51 EAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS 130 (273)
T ss_pred HHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4457888999999998873332221 11235566655 79999998822 2235899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+||||||+||+++.++.+|++|||+++....... +
T Consensus 131 ~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-------- 169 (273)
T cd05035 131 NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y-------- 169 (273)
T ss_pred hCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c--------
Confidence 99999999999999999999999999998743311100 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
. ......++..|+|||.+.+..++.++||||||
T Consensus 170 ------------------------------------------~-----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG 202 (273)
T cd05035 170 ------------------------------------------R-----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 202 (273)
T ss_pred ------------------------------------------c-----ccccccCCccccCHhhcccCCCCcccchHHHH
Confidence 0 00001235679999999888899999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||.... .......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 203 ~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 203 VTMWEIATRGQTPYPGVE-NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999986 443333 233444444443333333344566699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-26 Score=240.67 Aligned_cols=207 Identities=17% Similarity=0.231 Sum_probs=155.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++|+|++++++ .+... ...++++++ .|++|.+++......++..++..++.||+.||.|||+.||+|+
T Consensus 65 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~ 140 (286)
T cd06614 65 EILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHR 140 (286)
T ss_pred HHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 445688899999999887 33222 445666666 6799999996654469999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 141 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 171 (286)
T cd06614 141 DIKSDNILLSKDGSVKLADFGFAAQLTKEKS------------------------------------------------- 171 (286)
T ss_pred CCChhhEEEcCCCCEEECccchhhhhccchh-------------------------------------------------
Confidence 9999999999999999999997632211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|+|||||++|+|+
T Consensus 172 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~ 210 (286)
T cd06614 172 -----------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA 210 (286)
T ss_pred -----------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH
Confidence 000134688999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch-hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ-LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||...... ..+..+.....+.. ... ......+++.+||+.+|.+|||+.++++|+||....
T Consensus 211 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 211 EGEPPYLREPPL-RALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred hCCCCCCCCCHH-HHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 8 55433332 22222222222221 111 233455999999999999999999999999999853
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=238.95 Aligned_cols=203 Identities=21% Similarity=0.214 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------------~~~l~~~~~~~i~~ 89 (712)
++..+++.+.|||++++++ ++. .....++++|+ .+++|.+++... ...+++.+++.++.
T Consensus 56 ~E~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 131 (283)
T cd05090 56 QEASLMAELHHPNIVCLLG-VVT---QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131 (283)
T ss_pred HHHHHHhhCCCCCeeeEEE-EEe---cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHH
Confidence 3556889999999999887 332 23456777776 588999998321 12478889999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.++++|||+++........
T Consensus 132 ~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------- 180 (283)
T cd05090 132 QIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY------------------------------- 180 (283)
T ss_pred HHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce-------------------------------
Confidence 9999999999999999999999999999999999999988543211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......++..|+|||.+.+..+
T Consensus 181 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05090 181 ---------------------------------------------------------RVQPKSLLPIRWMPPEAIMYGKF 203 (283)
T ss_pred ---------------------------------------------------------ecccCCCccceecChHHhccCCC
Confidence 00000234677999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||..+|.+||++.+|+++
T Consensus 204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 999999999999999997 5544332 33444444444333333334556699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=235.75 Aligned_cols=200 Identities=15% Similarity=0.140 Sum_probs=148.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++++++ .+. .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||+.|++|
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H 126 (261)
T cd05072 51 EANLMKTLQHDKLVRLYA-VVT---KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 126 (261)
T ss_pred HHHHHHhCCCCCeeeEEE-EEc---CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 455788899999999887 332 22345667766 68999999943 3445889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 127 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (261)
T cd05072 127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYT----------------------------------------------- 159 (261)
T ss_pred cccchhhEEecCCCcEEECCCccceecCCCcee-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 197 (261)
T cd05072 160 ------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEI 197 (261)
T ss_pred ------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHH
Confidence 00002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+......+..........+++.+||..+|++||+++++++
T Consensus 198 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 198 VTYGKIPYPGMS-NSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HccCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 454332 22333444433333333223345559999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=239.66 Aligned_cols=208 Identities=19% Similarity=0.234 Sum_probs=151.4
Q ss_pred cceeeccCCCCCccccccccccccc-------ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~-------~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+...+..++|||++.+++ ++.+.. ....+++++++.+++|...+......+++.+++.++.||+.||.|||+
T Consensus 56 e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 134 (302)
T cd07864 56 EIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK 134 (302)
T ss_pred HHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 445678899999999887 443332 233788999998778988886555568999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
.||+|+||||+||+++.++.+|++|||.+.........
T Consensus 135 ~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------ 172 (302)
T cd07864 135 KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR------------------------------------------ 172 (302)
T ss_pred CCeecCCCCHHHEEECCCCcEEeCcccccccccCCccc------------------------------------------
Confidence 99999999999999999999999999987432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
+ .....++..|+|||.+.+. .++.++||||||
T Consensus 173 ---------------------------------------------~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG 205 (302)
T cd07864 173 ---------------------------------------------P--YTNKVITLWYRPPELLLGEERYGPAIDVWSCG 205 (302)
T ss_pred ---------------------------------------------c--cccceeccCccChHHhcCCCCCCchhHHHHHH
Confidence 0 0002347789999988654 478999999999
Q ss_pred HHHHHhhC---CCCCChhhHHH--HHhhcccCCCc--------------------------hhhhcCchhHHHHHHcCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRT--MSSLRHRVLPP--------------------------QLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~--~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~ 308 (712)
|++|+|++ ||...+..... +........+. ......+...+++.+||..
T Consensus 206 ~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 285 (302)
T cd07864 206 CILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL 285 (302)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccC
Confidence 99999998 44433222111 11111111000 0111224455999999999
Q ss_pred CCCCCCCHHHHhcCcCC
Q 005147 309 EPSGRPKMGELLQSEFL 325 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~ 325 (712)
+|.+|||+.+++.||||
T Consensus 286 ~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 286 DPSKRCTAEEALNSPWL 302 (302)
T ss_pred ChhhCCCHHHHhcCCCC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=237.24 Aligned_cols=204 Identities=20% Similarity=0.259 Sum_probs=151.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..++..++|+|++++++ ++.+ ...+++++++.+++|.+++.+....+++.+++.++.||+.||.|||++||+|+|
T Consensus 48 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~ 123 (282)
T cd07829 48 EISLLKELKHPNIVKLLD-VIHT---ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRD 123 (282)
T ss_pred HHHHHHhcCCCCHHHHHh-hhhc---CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 445778889999999888 4432 256788888877899999966544599999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+........ .
T Consensus 124 l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~----------------- 154 (282)
T cd07829 124 LKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------T----------------- 154 (282)
T ss_pred CChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------c-----------------
Confidence 999999999999999999998743321100 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
.....++.+|+|||.+.+. .++.++|||||||++|||+
T Consensus 155 -----------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 193 (282)
T cd07829 155 -----------------------------------------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMI 193 (282)
T ss_pred -----------------------------------------cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHH
Confidence 0002357789999998776 6899999999999999999
Q ss_pred C---CCCCChhhHHHHHhhc-------------------ccCCCc--------hhhhcCchhHHHHHHcCCCCCCCCCCH
Q 005147 267 C---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
+ ||.............. ...++. .+........+++.+||..+|.+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 273 (282)
T cd07829 194 TGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA 273 (282)
T ss_pred hCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCH
Confidence 9 4433322111111000 000110 011123345699999999999999999
Q ss_pred HHHhcCcCC
Q 005147 317 GELLQSEFL 325 (712)
Q Consensus 317 ~eiL~hp~~ 325 (712)
.+++.||||
T Consensus 274 ~~~l~~p~~ 282 (282)
T cd07829 274 KEALKHPYF 282 (282)
T ss_pred HHHhhCcCC
Confidence 999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=235.40 Aligned_cols=202 Identities=13% Similarity=0.141 Sum_probs=151.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ .+. ....+++++|+ .+++|.+++......+++.+++.++.|++.||.|||++||+|+
T Consensus 55 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~ 130 (266)
T cd05033 55 EASIMGQFDHPNIIRLEG-VVT---KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHR 130 (266)
T ss_pred HHHHHHhCCCCCcceEeE-EEe---cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 455788899999999888 442 23456777776 5889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.......- .+
T Consensus 131 di~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~--------------- 163 (266)
T cd05033 131 DLAARNILVNSNLVCKVSDFGLSRRLEDSEA--------------------------------TY--------------- 163 (266)
T ss_pred CCCcceEEEcCCCCEEECccchhhccccccc--------------------------------ce---------------
Confidence 9999999999999999999998854321100 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 164 -----------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~ 202 (266)
T cd05033 164 -----------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 202 (266)
T ss_pred -----------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHH
Confidence 000022467899999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....++..........+++.+||+.+|++||++.+++++
T Consensus 203 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 203 SYGERPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ccCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 6 5543332 23333333332222223334455699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=239.81 Aligned_cols=203 Identities=19% Similarity=0.264 Sum_probs=146.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+++++ ++. ....+++++|+ .+++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 49 REIRMLKQLRHENLVNLIE-VFR---RKKRLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred HHHHHHHhcCCcchhhHHH-hcc---cCCeEEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999888 442 23456777776 5777777664433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPGE------------------------------------------------ 155 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCcc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 193 (286)
T cd07846 156 ------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE 193 (286)
T ss_pred ------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence 000135688999999987644 7889999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc---c------------------CCCc---------hhhhcCchhHHHHHHcCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH---R------------------VLPP---------QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~---~------------------~~~~---------~~~~~~~~~~~li~~~L~~dP~ 311 (712)
|++ ||...... .....+.. . ..+. ..........+|+.+||..+|.
T Consensus 194 l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 272 (286)
T cd07846 194 MLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD 272 (286)
T ss_pred HHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence 999 44332221 11111100 0 0000 0111223455999999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+||++.++++||||
T Consensus 273 ~Rp~~~~il~~~~~ 286 (286)
T cd07846 273 DRPSSSQLLHHEFF 286 (286)
T ss_pred cchhHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=240.02 Aligned_cols=198 Identities=14% Similarity=0.117 Sum_probs=144.4
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +|||++++++ .+.. ...+++++++ .+++|.+++.+.. ..+++..++.|+.|
T Consensus 52 E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 127 (297)
T cd05089 52 ELEVLCKLGHHPNIINLLG-ACEN---RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127 (297)
T ss_pred HHHHHHhhcCCCchhheEE-EEcc---CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHH
Confidence 44456666 7999999887 4422 2345666666 6899999994321 24788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.+|++|||++......
T Consensus 128 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------------------------- 172 (297)
T cd05089 128 VATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------------------------- 172 (297)
T ss_pred HHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce-----------------------------------
Confidence 999999999999999999999999999999999999987321000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
+ .......+..|+|||.+.+..++
T Consensus 173 ~--------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 196 (297)
T cd05089 173 V--------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 196 (297)
T ss_pred e--------------------------------------------------------ccCCCCcCccccCchhhccCCCC
Confidence 0 00001124569999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||..+|.+|||+.++++
T Consensus 197 ~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 197 TKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999986 55443332 233333333322222223345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=234.51 Aligned_cols=200 Identities=15% Similarity=0.127 Sum_probs=149.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|||++++++ ++. ....+++++|+. |++|.+++... +..+++.++..++.||+.||.|||+.||+|
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (261)
T cd05068 51 EAQIMKKLRHPKLIQLYA-VCT---LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH 126 (261)
T ss_pred HHHHHHHCCCCCccceeE-EEe---cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 445788899999999887 442 234567788775 99999999543 356899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++...+.....
T Consensus 127 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (261)
T cd05068 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYE----------------------------------------------- 159 (261)
T ss_pred ccCCcceEEEcCCCCEEECCcceEEEccCCccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+..|+|||.+.+..++.++|||||||++|||
T Consensus 160 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 197 (261)
T cd05068 160 ------------------------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEI 197 (261)
T ss_pred ------------------------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHH
Confidence 00001124579999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 198 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 198 VTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 97 55443322 333333333222222233455669999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=240.71 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=148.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+..+++.+ +|+||+++++ .+.. ....++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++||+
T Consensus 88 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~iv 163 (302)
T cd05055 88 ELKIMSHLGNHENIVNLLG-ACTI---GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI 163 (302)
T ss_pred HHHHHHhccCCCCcceEEE-EEec---CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44567777 8999999887 4422 2356777776 68999999954 233489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||+++...... .+
T Consensus 164 H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------- 197 (302)
T cd05055 164 HRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY------------- 197 (302)
T ss_pred hhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-------------
Confidence 99999999999999999999999885432110 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 198 -~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 235 (302)
T cd05055 198 -V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWE 235 (302)
T ss_pred -e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHH
Confidence 0 0000235778999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||............+.....+.......+...+|+.+||..+|++|||+.++++
T Consensus 236 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 236 IFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 986 554333322222333222222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-26 Score=234.91 Aligned_cols=200 Identities=13% Similarity=0.126 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++|+|++.+++ ++.. ...++++++ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+
T Consensus 50 ~E~~~l~~l~~~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05070 50 EEAQIMKKLRHDKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124 (260)
T ss_pred HHHHHHHhcCCCceEEEEe-EECC----CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3445788899999999887 3321 234566666 68999999854 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||.+.........
T Consensus 125 H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05070 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYT---------------------------------------------- 158 (260)
T ss_pred cCCCccceEEEeCCceEEeCCceeeeeccCcccc----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05070 159 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred -------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence 0000234567999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....++..........+|+.+||..+|.+|||+.+++.
T Consensus 196 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 196 LVTKGRVPYPGMN-NREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 997 444322 22333334333222222233345569999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=232.35 Aligned_cols=200 Identities=16% Similarity=0.162 Sum_probs=149.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++.. ...+++++|+ .+++|.+++......+++..++.++.||+.+|.|+|++|++|+
T Consensus 42 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~ 117 (250)
T cd05085 42 EARILKQYDHPNIVKLIG-VCTQ---RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHR 117 (250)
T ss_pred HHHHHHhCCCCCcCeEEE-EEec---CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 445788899999999888 4532 2356677776 6999999996555558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.........
T Consensus 118 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 149 (250)
T cd05085 118 DLAARNCLVGENNVLKISDFGMSRQEDDGIYS------------------------------------------------ 149 (250)
T ss_pred ccChheEEEcCCCeEEECCCccceeccccccc------------------------------------------------
Confidence 99999999999999999999987321100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 150 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~ 188 (250)
T cd05085 150 -----------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188 (250)
T ss_pred -----------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHh
Confidence 000012356799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 189 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 189 SLGVCPYPGMTN-QQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred cCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7 5644332 2333333333222222233455669999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=234.10 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=147.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++++++ .+. ...+++++++ .+++|.+++.+ .+..+++..++.++.||+.||+|||+.||+|
T Consensus 51 E~~~l~~l~~~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (262)
T cd05071 51 EAQVMKKLRHEKLVQLYA-VVS----EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 125 (262)
T ss_pred HHHHHHhCCCCCcceEEE-EEC----CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 445788899999999877 332 2335677776 68899999954 3345789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... +.
T Consensus 126 ~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~------------- 158 (262)
T cd05071 126 RDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT------------- 158 (262)
T ss_pred cccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc-------------
Confidence 9999999999999999999999874332110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~el 196 (262)
T cd05071 159 ------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196 (262)
T ss_pred ------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHH
Confidence 00002356789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 lt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 197 TTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 97 55443322 223333222222222223344569999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=236.68 Aligned_cols=202 Identities=13% Similarity=0.098 Sum_probs=149.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~l~~~~~~~i~~qil~~l~ 96 (712)
++..+|+.++|||++++++ ++.. ...+++++|+ .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVST---GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcC---CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 3445688899999999888 4432 2456777777 589999999432 123678899999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.||+||||||+||+++.++.++++|||+++........
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------------------------------- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc--------------------------------------
Confidence 999999999999999999999999999999987432211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
. ......++..|+|||.+.+..++.++|||
T Consensus 176 ---------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 ---------------------------------------------R-----KGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred ---------------------------------------------c-----cCCCCCccccccCHHHHhcCCCCcccchH
Confidence 0 00002457789999999888899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLS-NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 554332 23334444433333222223445569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=243.21 Aligned_cols=211 Identities=17% Similarity=0.198 Sum_probs=155.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..++|||++++++ ++.. ....+++++++.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~-~~~~--~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSD-IFIS--PLEDIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEee-eEec--CCCcEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3455788899999999887 4422 23357888999889999988543 37888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999999987321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 000346788999998866 4589999999999999999
Q ss_pred hC---CCCCChhhHHH--HHh------------------------hccc-CCCc-hh-hhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QL-LLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~------------------------~~~~-~~~~-~~-~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||......... ... +... ..|. .. ....+...++|.+||+.+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 45433211100 000 0000 0010 01 1122345599999999999999
Q ss_pred CCHHHHhcCcCCCCCcCchHHH
Q 005147 314 PKMGELLQSEFLNEPRDSMEER 335 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~~~e~ 335 (712)
||+.+++.||||.....+..+.
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred CCHHHHhcCCccccccCCcccc
Confidence 9999999999998877765543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-28 Score=232.65 Aligned_cols=231 Identities=16% Similarity=0.171 Sum_probs=175.7
Q ss_pred ccccccccccccCCCCCcceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc----CCCCCC
Q 005147 4 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSV 79 (712)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~----~~~~~l 79 (712)
++++=+|+-...+...+..|+.+-+ ++.+.-+-||||++|+..| .+..-++.||+.+.||..+.+ .....+
T Consensus 90 ~~mAVKrIr~~n~~keq~rll~e~d-~~mks~~cp~IVkfyGa~F----~EGdcWiCMELMd~SlDklYk~vy~vq~~~i 164 (361)
T KOG1006|consen 90 KLMAVKRIRSNNIEKEQKRLLMEHD-TVMKSSNCPNIVKFYGALF----SEGDCWICMELMDISLDKLYKRVYSVQKSRI 164 (361)
T ss_pred cEEEEEEeeeccchHHHHHHHHHHH-HHHhhcCCcHHHHHhhhhh----cCCceeeeHHHHhhhHHHHHHHHHHHHhccC
Confidence 3445555555555445555665555 4677788999999888555 334567899999999987652 233458
Q ss_pred ChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 80 DVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 80 ~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
++...-+|..-.++||+||-. ..|||||+||+|||++..|.||+||||+|......
T Consensus 165 pE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------------- 221 (361)
T KOG1006|consen 165 PENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------------- 221 (361)
T ss_pred cHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-----------------------
Confidence 999999999999999999997 59999999999999999999999999998332100
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
+ ..+.-.|...|
T Consensus 222 ------------i--------------------------------------------------------AkT~daGCrpY 233 (361)
T KOG1006|consen 222 ------------I--------------------------------------------------------AKTVDAGCRPY 233 (361)
T ss_pred ------------H--------------------------------------------------------HhhhccCCccc
Confidence 0 01124678999
Q ss_pred cCcccccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-----cCchhHHHHHHcCCC
Q 005147 239 ASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-----KFPKEASFCLWLLHP 308 (712)
Q Consensus 239 ~aPE~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~L~~ 308 (712)
||||.+.. ..|+.+||+||||++|||+.| ||..+.........+..+.+|..... .......||..||.+
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 99999943 349999999999999999999 77777776666666666665543322 234556899999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|-..||+..+++.+||+.....
T Consensus 314 d~~~Rpky~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 314 DRSDRPKYDDLKKFPFYRMYAV 335 (361)
T ss_pred ccccCcchhhhhcCchhhhhhh
Confidence 9999999999999999987643
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-26 Score=240.29 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=148.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+.+++ ++.. ...+++++|+ .+++|.++|.+. ...++..+++.++.
T Consensus 69 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (304)
T cd05101 69 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTY 144 (304)
T ss_pred HHHHHHHhhccCCCchheeE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHH
Confidence 444567777 8999999888 4432 2456667776 688999999442 12477888999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.++++|||+++........
T Consensus 145 qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~------------------------------- 193 (304)
T cd05101 145 QVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY------------------------------- 193 (304)
T ss_pred HHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988543211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
. ......++..|+|||++.+..+
T Consensus 194 --~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 216 (304)
T cd05101 194 --K-------------------------------------------------------KTTNGRLPVKWMAPEALFDRVY 216 (304)
T ss_pred --c-------------------------------------------------------cccCCCCCceeeCchhhccCCC
Confidence 0 0000234678999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|+|++ ||.. .........+.....+...........+|+.+||..+|.+|||+.++++
T Consensus 217 ~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 217 THQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 999999999999999987 3432 2233333334333322222223345569999999999999999999988
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-26 Score=249.87 Aligned_cols=156 Identities=15% Similarity=0.163 Sum_probs=116.4
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 78 ~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
.+++.++..++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------- 293 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------- 293 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------------------
Confidence 3677888999999999999999999999999999999999999999999988533111000
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
.......++..
T Consensus 294 ---------------------------------------------------------------------~~~~~~~~~~~ 304 (400)
T cd05105 294 ---------------------------------------------------------------------VSKGSTFLPVK 304 (400)
T ss_pred ---------------------------------------------------------------------cccCCcCCCcc
Confidence 00001345778
Q ss_pred ccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
|+|||.+.+..++.++|||||||++|||++ ||............+.....++......+...+++.+||..+|++|
T Consensus 305 y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 384 (400)
T cd05105 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR 384 (400)
T ss_pred eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence 999999988889999999999999999985 5544333333333333333332222233455699999999999999
Q ss_pred CCHHHHhc
Q 005147 314 PKMGELLQ 321 (712)
Q Consensus 314 pt~~eiL~ 321 (712)
||+.++.+
T Consensus 385 Pt~~~l~~ 392 (400)
T cd05105 385 PSFLHLSD 392 (400)
T ss_pred cCHHHHHH
Confidence 99998876
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=256.15 Aligned_cols=201 Identities=20% Similarity=0.234 Sum_probs=161.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCC----CChhHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRS----VDVYECLHIFRQIV 92 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~----l~~~~~~~i~~qil 92 (712)
||..+|+.++|||||++|| +| ...+++|+++|| .-|+|.+||+.. +.. |+..+.++|+.||+
T Consensus 538 REaeLla~l~H~nIVrLlG-VC---~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIA 613 (774)
T KOG1026|consen 538 REAELLAELQHPNIVRLLG-VC---REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIA 613 (774)
T ss_pred HHHHHHHhccCCCeEEEEE-EE---ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHH
Confidence 4455899999999999999 66 345678888888 589999999432 122 78889999999999
Q ss_pred HHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccc
Q 005147 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (712)
Q Consensus 93 ~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg 172 (712)
.|++||-++.+|||||-..|+||..+-.|||.|||++++.=+. |+
T Consensus 614 aGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYss----------------------------------DY- 658 (774)
T KOG1026|consen 614 AGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSS----------------------------------DY- 658 (774)
T ss_pred HHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhh----------------------------------hh-
Confidence 9999999999999999999999999999999999999764222 11
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc
Q 005147 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (712)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 252 (712)
.|... ...-...|||||.+..++++++
T Consensus 659 ---------------------------------Yk~~~--------------------~t~lPIRWMppEsIly~kFTte 685 (774)
T KOG1026|consen 659 ---------------------------------YKVRG--------------------NTLLPIRWMPPESILYGKFTTE 685 (774)
T ss_pred ---------------------------------hcccC--------------------CceeeeecCCHHHhhcCcccch
Confidence 00000 0112457999999999999999
Q ss_pred cchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 253 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 253 sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
|||||+||+|||+++ ||....+. +++..++.+..-+......+...+|+..||+.+|++||++.||-
T Consensus 686 SDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 686 SDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred hhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999 88765544 66777777766555555666677999999999999999999973
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-26 Score=232.52 Aligned_cols=202 Identities=20% Similarity=0.255 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|+||+.+++.++ . ...+++++++ .+++|.+++.+ ....+++..+..++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~~~~-~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 48 NEIRILASVNHPNIISYKEAFL-D---GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred HHHHHHHhCCCCCchhhhhhhc-c---CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4556788899999999887333 2 2556777776 69999999843 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||.+...... +
T Consensus 124 i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~----------- 157 (256)
T cd08530 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M----------- 157 (256)
T ss_pred cccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C-----------
Confidence 999999999999999999999999987432111 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....++..|+|||.+.+..++.++|+||||+++
T Consensus 158 ----------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 191 (256)
T cd08530 158 ----------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLL 191 (256)
T ss_pred ----------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHH
Confidence 0003467889999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||...... ...........++.......+..+++.+||..+|.+|||+.++++||++
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 192 YEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99998 55444332 2333333444444333344556699999999999999999999999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-26 Score=251.56 Aligned_cols=213 Identities=15% Similarity=0.188 Sum_probs=157.0
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCC---ChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l---~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+|.-.|.. =+|||||+.|| .+...+..||..|.|..+|.+++......+ .....+.++.|++.||++||+.+
T Consensus 551 rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 551 REIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred HHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 44334444 58999999666 456677899999999999999996632111 22556889999999999999999
Q ss_pred ceeccCCCCceeecC---C--CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 103 IVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 103 IvHrDLkP~NIll~~---~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||||||||.||||+. . ..++|.|||+|+..+... ..|.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~~----- 669 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSFS----- 669 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chhh-----
Confidence 999999999999985 2 357999999997653321 0010
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
+.....||.+|+|||++....-+.++||||
T Consensus 670 --------------------------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDiFs 699 (903)
T KOG1027|consen 670 --------------------------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDIFS 699 (903)
T ss_pred --------------------------------------------------cccCCCCcccccCHHHHhccccCcccchhh
Confidence 001146899999999999998888999999
Q ss_pred HHHHHHHhhC-CCCCChhhHHHHHhhcccCCCchhhhcCc--hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 258 LGVLLFELFC-PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 258 lGvll~eLl~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++|+.++ +-.++........++..+.+........+ .+.+||.+||+++|..||+|.++|.||||.....
T Consensus 700 lGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ek 775 (903)
T KOG1027|consen 700 LGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEK 775 (903)
T ss_pred cCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHH
Confidence 9999999998 23333233333334444443333233333 5569999999999999999999999999987644
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-26 Score=237.41 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=138.6
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..+++.+.||||+++++ ++.. ....++++|| .+++|..++.+....+++..++.++.||+.||+|||++||+|||
T Consensus 67 ~~~~~~l~h~niv~~~~-~~~~---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d 142 (274)
T cd05076 67 ASLMSQVSHIHLAFVHG-VCVR---GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGN 142 (274)
T ss_pred HHHHhcCCCCCeeeEEE-EEEe---CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 34678899999999888 5432 2344566665 68999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCC-------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 108 VRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 108 LkP~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||+||+++..+ .++++|||.+......
T Consensus 143 lkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~--------------------------------------------- 177 (274)
T cd05076 143 VCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR--------------------------------------------- 177 (274)
T ss_pred CCcccEEEeccCcccCccceeeecCCccccccccc---------------------------------------------
Confidence 999999997543 3677777655211000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlG 259 (712)
....++..|+|||.+.+ ..++.++||||||
T Consensus 178 -------------------------------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG 208 (274)
T cd05076 178 -------------------------------------------------EERVERIPWIAPECVPGGNSLSTAADKWSFG 208 (274)
T ss_pred -------------------------------------------------cccccCCcccCchhhcCCCCCCcHHHHHHHH
Confidence 00245777999998876 4589999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhccc-CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||....... ........ ..|. ...+...+++.+||..+|.+|||+.++|++
T Consensus 209 ~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 209 TTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99999963 554332211 11111111 1111 123456799999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=233.82 Aligned_cols=199 Identities=13% Similarity=0.122 Sum_probs=147.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++.+++ ++. ....++++++ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+|
T Consensus 51 E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 125 (260)
T cd05069 51 EAQIMKKLRHDKLVPLYA-VVS----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH 125 (260)
T ss_pred HHHHHHhCCCCCeeeEEE-EEc----CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 455788999999999876 442 2335666666 67899999954 3344789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+.........
T Consensus 126 ~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 158 (260)
T cd05069 126 RDLRAANILVGDNLVCKIADFGLARLIEDNEYT----------------------------------------------- 158 (260)
T ss_pred cccCcceEEEcCCCeEEECCCccceEccCCccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el 196 (260)
T cd05069 159 ------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196 (260)
T ss_pred ------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 00002346679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+++.+||..+|.+||+++++++
T Consensus 197 ~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 197 VTKGRVPYPGMVN-REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 5543322 2333333333222222223344559999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-27 Score=232.09 Aligned_cols=208 Identities=12% Similarity=0.148 Sum_probs=158.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++.+-+-|.||+.|+.+|. ...+++||||| .|++.+.++.+...|++.++..|++..+.||+|||...-|||
T Consensus 78 EISIMQQC~S~yVVKYYGSYFK----~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHR 153 (502)
T KOG0574|consen 78 EISIMQQCKSKYVVKYYGSYFK----HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHR 153 (502)
T ss_pred HHHHHHHcCCchhhhhhhhhcc----CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 4445777889999998885542 23456666665 699999998888889999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||++.+|..|++|||.+...-.. |
T Consensus 154 DIKAGNILLNT~G~AKLADFGVAGQLTDT-----------------------M--------------------------- 183 (502)
T KOG0574|consen 154 DIKAGNILLNTDGIAKLADFGVAGQLTDT-----------------------M--------------------------- 183 (502)
T ss_pred hcccccEEEcccchhhhhhccccchhhhh-----------------------H---------------------------
Confidence 99999999999999999999988322000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.+....+|||.|||||++..-.|++.+||||||++..||.
T Consensus 184 ----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMA 223 (502)
T KOG0574|consen 184 ----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMA 223 (502)
T ss_pred ----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhh
Confidence 0112368999999999999989999999999999999999
Q ss_pred CCCCCChhhHHHHHhhc--ccCCCchh--hhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 CPFSTGEEKTRTMSSLR--HRVLPPQL--LLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~pf~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+-++..+- ..|..+- -...|+.+ +..|.. ..+|++.||..+|++|.|+.++++|||++....
T Consensus 224 EG~PPYsDI-HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 224 EGRPPYSDI-HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred cCCCCcccc-cccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 832222111 1121111 11223322 223433 349999999999999999999999999998755
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=233.69 Aligned_cols=195 Identities=17% Similarity=0.137 Sum_probs=145.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|||++++++ ++.. ..+++++++ .+++|.+++... ...+++..++.++.||+.||.|||+.|++|
T Consensus 49 e~~~l~~~~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H 123 (254)
T cd05083 49 ETAVMTKLHHKNLVRLLG-VILH----NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVH 123 (254)
T ss_pred HHHHHHhCCCCCcCeEEE-EEcC----CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 455788899999999887 3322 224666666 689999999543 335899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......
T Consensus 124 ~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 153 (254)
T cd05083 124 RDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------------------- 153 (254)
T ss_pred cccCcceEEEcCCCcEEECCCccceecccc--------------------------------------------------
Confidence 999999999999999999999987321000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 154 -------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el 190 (254)
T cd05083 154 -------------------------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV 190 (254)
T ss_pred -------------------------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHH
Confidence 0001224579999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+++.+||..+|..||++.++++
T Consensus 191 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 191 FSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 86 55443332 222233333222222222344559999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-26 Score=239.23 Aligned_cols=208 Identities=17% Similarity=0.303 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++++++ .+. .....++++|+ .+++|.+++... .+++..++.++.||+.||.|||+.||+|
T Consensus 66 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH 139 (292)
T cd06657 66 NEVVIMRDYQHENVVEMYN-SYL---VGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIH 139 (292)
T ss_pred HHHHHHHhcCCcchhheee-EEE---eCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3456788899999999888 342 23456777777 688999988443 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 140 ~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 171 (292)
T cd06657 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 171 (292)
T ss_pred CCCCHHHEEECCCCCEEEcccccceecccccc------------------------------------------------
Confidence 99999999999999999999998732211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+||+||++|+|
T Consensus 172 ------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el 209 (292)
T cd06657 172 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209 (292)
T ss_pred ------------------------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC--chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||...... .....+.....+ .......+...+++.+||..+|.+||++.++++||||.....+
T Consensus 210 ~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 210 VDGEPPYFNEPPL-KAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 98 55443222 222222222111 1122234556699999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-26 Score=241.22 Aligned_cols=199 Identities=16% Similarity=0.148 Sum_probs=145.0
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +|+||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.+++.++.|
T Consensus 57 Ei~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 132 (303)
T cd05088 57 ELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 132 (303)
T ss_pred HHHHHHHhcCCCCcceEEE-EECC---CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHH
Confidence 44456777 8999999888 4422 2345666666 6899999994321 24789999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.++++|||++...... .
T Consensus 133 i~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~-------------------------------- 178 (303)
T cd05088 133 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V-------------------------------- 178 (303)
T ss_pred HHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh--h--------------------------------
Confidence 999999999999999999999999999999999999987321000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
......++..|+|||.+.+..++
T Consensus 179 ---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 201 (303)
T cd05088 179 ---------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 201 (303)
T ss_pred ---------------------------------------------------------hcccCCCcccccCHHHHhccCCc
Confidence 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||++|||++ ||...... .....+.....+.......+...+++.+||..+|.+||++.++|++
T Consensus 202 ~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 202 TNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 55433222 2222232222222222234556699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-26 Score=232.25 Aligned_cols=201 Identities=18% Similarity=0.210 Sum_probs=146.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+||+.+++ ++. .....++++++ .|++|.+++.+....+++..++.++.|++.+|+|||++||+||
T Consensus 42 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~ 117 (251)
T cd05041 42 EAEILKQYDHPNIVKLIG-VCV---QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHR 117 (251)
T ss_pred HHHHHHhCCCCCeEEEEE-EEe---cCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehh
Confidence 344788899999999877 442 22355666666 6999999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 118 di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 149 (251)
T cd05041 118 DLAARNCLVGENNVLKISDFGMSREEEGGIYT------------------------------------------------ 149 (251)
T ss_pred hcCcceEEEcCCCcEEEeeccccccccCCcce------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 150 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~ 189 (251)
T cd05041 150 ----------------------------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETF 189 (251)
T ss_pred ----------------------------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHH
Confidence 0000012245699999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+......+..........+++.+||..+|.+|||+.++++
T Consensus 190 t~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 190 SLGDTPYPGMSN-QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred hccCCCCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 7 4443332 2222222222111111122345559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-26 Score=234.93 Aligned_cols=200 Identities=19% Similarity=0.209 Sum_probs=152.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++.+++ .+. ....+++++++ .+++|.+++.. ....+++..++.++.||+.||.|||++||+|
T Consensus 48 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 123 (255)
T cd08219 48 EAVLLAKMKHPNIVAFKE-SFE---ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLH 123 (255)
T ss_pred HHHHHHhCCCCCcceEEE-EEE---ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 445688899999999888 442 23456777777 58999998843 3445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... .+
T Consensus 124 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~-------------- 156 (255)
T cd08219 124 RDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY-------------- 156 (255)
T ss_pred CCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc--------------
Confidence 9999999999999999999999874321110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|+||||+++|+|
T Consensus 157 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l 193 (255)
T cd08219 157 -------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL 193 (255)
T ss_pred -------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchhheeh
Confidence 0013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....++..........+|+.+||..+|.+|||+.+++.-
T Consensus 194 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 194 CTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred hhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 98 66543322 2333333443333222233455699999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-26 Score=244.48 Aligned_cols=201 Identities=21% Similarity=0.262 Sum_probs=147.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhc---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ--- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~--- 101 (712)
.+..+|+.+.|||+|.|+| +|.+... ..++|+|| ..|+|.++|..... .++|...++|+.+++.||+|||..
T Consensus 120 ~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~ 196 (361)
T KOG1187|consen 120 NEVEILSRLRHPNLVKLLG-YCLEGGE--HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP 196 (361)
T ss_pred HHHHHHhcCCCcCcccEEE-EEecCCc--eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence 5666899999999999999 6643332 45555555 68899999955443 799999999999999999999984
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCC-CCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
.||||||||+||||+.+...|++|||+++.... ...
T Consensus 197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~------------------------------------------- 233 (361)
T KOG1187|consen 197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS------------------------------------------- 233 (361)
T ss_pred CEecCCCCHHHeeECCCCCEEccCccCcccCCccccc-------------------------------------------
Confidence 399999999999999999999999999833211 100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCccccccc-ccCccccCcccccCCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.... .||.+|++||++..+..+.++||||||
T Consensus 234 ------------------------------------------------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG 265 (361)
T KOG1187|consen 234 ------------------------------------------------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFG 265 (361)
T ss_pred ------------------------------------------------eeeecCCCCccCChhhhccCCcCcccccccch
Confidence 0001 689999999999988899999999999
Q ss_pred HHHHHhhCC---CCCC----hh--hHHHHHhhcc----cCCCchhh-hcCc------hhHHHHHHcCCCCCCCCCCHHHH
Q 005147 260 VLLFELFCP---FSTG----EE--KTRTMSSLRH----RVLPPQLL-LKFP------KEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 260 vll~eLl~p---f~~~----~~--~~~~~~~~~~----~~~~~~~~-~~~~------~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
|+|.||+++ .... .. .......+.. .+..+.+. ..++ ....+..+|++.+|..||++.++
T Consensus 266 VvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~V 345 (361)
T KOG1187|consen 266 VVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQV 345 (361)
T ss_pred HHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHH
Confidence 999999993 2211 11 1111112222 12222222 2222 23378899999999999999997
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 346 v~ 347 (361)
T KOG1187|consen 346 VK 347 (361)
T ss_pred HH
Confidence 54
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=234.49 Aligned_cols=202 Identities=15% Similarity=0.168 Sum_probs=149.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ ++. ....+++++|+ .|++|.+++......++..+++.|+.||+.||.|||++||+||
T Consensus 55 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~ 130 (267)
T cd05066 55 EASIMGQFDHPNIIHLEG-VVT---KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHR 130 (267)
T ss_pred HHHHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeh
Confidence 455788899999999877 442 23456777776 5899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------ 162 (267)
T cd05066 131 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------------------------------------------ 162 (267)
T ss_pred hhchhcEEECCCCeEEeCCCCcccccccccce------------------------------------------------
Confidence 99999999999999999999988543211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........++..|+|||.+.+..++.++|+|||||++||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 163 ---------------------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred ---------------------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 00000012356799999998888999999999999999987
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.+...++......+...+++.+||+.+|.+||++.++++
T Consensus 204 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 204 SYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred cCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 5 44433222 223333333323332233445669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=234.27 Aligned_cols=203 Identities=20% Similarity=0.233 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|||++++++ .+.+ ...+++++|+ .+++|.+++. .....+++.+++.++.||+.||.|||+.|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (260)
T cd08222 51 QEAQLLSKLDHPAIVKFHA-SFLE---RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR 126 (260)
T ss_pred HHHHHHHhCCCCcHHHHHH-HHhc---CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3445788899999999887 4422 2356777776 6889998883 23456899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++ ++.++++|||.+....... +
T Consensus 127 i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~---------------------------------~------------ 160 (260)
T cd08222 127 ILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSC---------------------------------D------------ 160 (260)
T ss_pred ccccCCChhheEee-cCCEeecccCceeecCCCc---------------------------------c------------
Confidence 99999999999996 4679999999874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|+||||+++
T Consensus 161 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~ 195 (260)
T cd08222 161 ---------------------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCIL 195 (260)
T ss_pred ---------------------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHH
Confidence 00013468889999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||..... ......+.....+.......+...+++.+||..+|.+||++.++++||||
T Consensus 196 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 196 YEMCCLAHAFEGQNF-LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHhCCCCCCCccH-HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99998 5543332 23333333333333222233455699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-26 Score=241.14 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=147.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +|||++.+++ ++.. ...+++++|+ .+++|.++|... ...++..+++.++.|
T Consensus 73 e~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 148 (307)
T cd05098 73 EMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQ 148 (307)
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence 44566666 7999999888 4432 2356667766 588999999432 124788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.++++|||.+.........
T Consensus 149 i~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------------------------- 196 (307)
T cd05098 149 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------------------------- 196 (307)
T ss_pred HHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh--------------------------------
Confidence 999999999999999999999999999999999999987433111000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......++..|+|||.+.+..++
T Consensus 197 ---------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~ 220 (307)
T cd05098 197 ---------------------------------------------------K-----KTTNGRLPVKWMAPEALFDRIYT 220 (307)
T ss_pred ---------------------------------------------------h-----ccccCCCccceeChHHhccCCCC
Confidence 0 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||.. .........+.....+...........+++.+||..+|.+|||+.++++
T Consensus 221 ~~~DvwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 221 HQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999986 4432 2233333334333333322233455569999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-26 Score=234.17 Aligned_cols=199 Identities=19% Similarity=0.173 Sum_probs=149.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++.+ ..+++++|+ .+++|.+++.+....+++..++.++.||+.||+|||+.|++|+
T Consensus 57 e~~~l~~~~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~ 131 (270)
T cd05056 57 EAYIMRQFDHPHIVKLIG-VITE----NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHR 131 (270)
T ss_pred HHHHHHhCCCCchhceeE-EEcC----CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445788899999999887 5543 234566665 6899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++........
T Consensus 132 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 163 (270)
T cd05056 132 DIAARNVLVSSPDCVKLGDFGLSRYLEDESYY------------------------------------------------ 163 (270)
T ss_pred ccChheEEEecCCCeEEccCceeeecccccce------------------------------------------------
Confidence 99999999999999999999987432110000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+....++.++|||||||++|||+
T Consensus 164 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 202 (270)
T cd05056 164 -----------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202 (270)
T ss_pred -----------------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 000022356799999998888999999999999999988
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+|+..+|.+|||+.+++.
T Consensus 203 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 203 MLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 66544433 223333333333322233455669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=232.11 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=149.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++++++ ++. ....+++++|+ .+++|.+++.+ .+..+++..++.++.||+.||.|||++||+|
T Consensus 52 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h 127 (261)
T cd05148 52 EVQALKRLRHKHLISLFA-VCS---VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH 127 (261)
T ss_pred HHHHHhcCCCcchhheee-eEe---cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 445678899999999887 442 23456777777 58899999954 3455899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... +
T Consensus 128 ~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~-------------- 159 (261)
T cd05148 128 RDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y-------------- 159 (261)
T ss_pred cccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c--------------
Confidence 9999999999999999999999884331110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+ .....++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l 197 (261)
T cd05148 160 L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEM 197 (261)
T ss_pred c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 0 0002346679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++......+...+++.+||..+|.+|||+.++++
T Consensus 198 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 198 FTYGQVPYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HcCCCCCCCcCCH-HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 96 4543332 2233333333222333333455669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8e-26 Score=235.94 Aligned_cols=206 Identities=18% Similarity=0.205 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++.+++ .+. ....+++++|+ .+++|.+++... .+++..+..++.||+.++.|||+.|++|
T Consensus 51 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h 124 (277)
T cd06641 51 QEITVLSQCDSPYVTKYYG-SYL---KDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIH 124 (277)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEE---eCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCeec
Confidence 3455788899999999888 442 23456777777 588999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++...... ++
T Consensus 125 ~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~-------------- 156 (277)
T cd06641 125 RDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI-------------- 156 (277)
T ss_pred CCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh--------------
Confidence 999999999999999999999987332110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+.+|+|||.+.+..++.++|+|||||++|+|
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l 194 (277)
T cd06641 157 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888889999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||..... ......+.....+...........+++.+||..+|.+||++.++++||||....
T Consensus 195 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 195 AKGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HcCCCCCCccch-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 99 4432222 122222222222222122234456999999999999999999999999998753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=234.57 Aligned_cols=198 Identities=15% Similarity=0.146 Sum_probs=143.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+++++ .+.. ...+++++|+ .+++|.+++.... ..+++.+++.++.|
T Consensus 45 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 45 ELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred HHHHHHhhccCCCeeeEEE-EEec---CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 44456667 8999999888 4422 2235666666 6899999984321 24788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+.||+||||||+||+++.++.++++|||++...... .
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~-------------------------------- 166 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V-------------------------------- 166 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh--h--------------------------------
Confidence 999999999999999999999999999999999999987311000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
.......+..|+|||.+.+..++
T Consensus 167 ---------------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~ 189 (270)
T cd05047 167 ---------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 189 (270)
T ss_pred ---------------------------------------------------------hccCCCCccccCChHHHccCCCC
Confidence 00001225579999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||..... ......+.....+...........+++.+||..+|.+|||+.++++
T Consensus 190 ~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 190 TNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred chhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 99999999999999995 5543222 2233333332222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-26 Score=236.09 Aligned_cols=200 Identities=17% Similarity=0.143 Sum_probs=147.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------------CCCChhHHHHHHHHHHH
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qil~ 93 (712)
..+++.+.|+||+++++ ++.. ...+++++++ .+++|.+++.... ..+++..++.++.||+.
T Consensus 58 ~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 133 (280)
T cd05092 58 AELLTVLQHQHIVRFYG-VCTE---GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIAS 133 (280)
T ss_pred HHHHhcCCCCCCceEEE-EEec---CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHH
Confidence 34678899999999877 4422 2346677766 6899999984432 24788999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||.|||++||+||||||+||+++.++.++++|||++.........
T Consensus 134 al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----------------------------------- 178 (280)
T cd05092 134 GMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------------------------------- 178 (280)
T ss_pred HHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCcee-----------------------------------
Confidence 999999999999999999999999999999999987432111000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. ......+++.|+|||.+.+..++.++
T Consensus 179 ---------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 205 (280)
T cd05092 179 ---------------------------------R--------------------VGGRTMLPIRWMPPESILYRKFTTES 205 (280)
T ss_pred ---------------------------------e--------------------cCCCccccccccCHHHhccCCcCchh
Confidence 0 00002346789999999988899999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|||++ ||...... ...........+.......+...+++.+||+.+|.+||++.++++
T Consensus 206 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 206 DIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred hHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999987 44333222 233333333333222233455669999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-26 Score=226.99 Aligned_cols=196 Identities=23% Similarity=0.368 Sum_probs=178.1
Q ss_pred hHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCC
Q 005147 473 NFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK 552 (712)
Q Consensus 473 ~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (712)
.=++.|+.|..+..+..+++.++.+.|+.|||||.++ ++++.||.+.+|++-+
T Consensus 192 ~K~~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqyL---------------------------vsgSvDGFiEVWny~~ 244 (508)
T KOG0275|consen 192 MKDQEEERYPTQLARSIKFGQKSHVECARFSPDGQYL---------------------------VSGSVDGFIEVWNYTT 244 (508)
T ss_pred hhhhHhhhchHHhhhheecccccchhheeeCCCCceE---------------------------eeccccceeeeehhcc
Confidence 3467789999999888899999999999999999999 7889999999999999
Q ss_pred cEEEEEccC---CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 553 LRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 553 ~~v~~dl~~---~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
++++.|++. ..+..|.++|.|++|++|.+++|+|+.||+||+|.+.++.+-.+ ...+|...|+|++|+. +
T Consensus 245 GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr------FdrAHtkGvt~l~FSr-D 317 (508)
T KOG0275|consen 245 GKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR------FDRAHTKGVTCLSFSR-D 317 (508)
T ss_pred chhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH------hhhhhccCeeEEEEcc-C
Confidence 999999984 34778999999999999999999999999999999988655332 2457899999999998 6
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 630 KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 630 ~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
+..++++++|.+|+|.-+.+|++++.|.+|+.-|+.+.|.+ ||+.++|+|.||+|++|+..+.+|+.++--..
T Consensus 318 ~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 318 NSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred cchhhcccccceEEEeccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 89999999999999999999999999999999999999996 99999999999999999999999988775443
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-26 Score=237.89 Aligned_cols=201 Identities=23% Similarity=0.273 Sum_probs=145.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+...+..++||||+++++ ++. ....+++++|+ .+++|.++|... ...++..++..|+.||+.||.|||+++|+|
T Consensus 51 e~~~l~~l~h~ni~~~~g-~~~---~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH 126 (259)
T PF07714_consen 51 EIQILRKLRHPNIVKLYG-FCI---ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIH 126 (259)
T ss_dssp HHHHHHTHSBTTBE-EEE-EEE---SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred cccccccccccccccccc-ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 445677889999999888 553 33346777777 578999999554 556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.+||+|||++.........
T Consensus 127 ~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~----------------------------------------------- 159 (259)
T PF07714_consen 127 GNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY----------------------------------------------- 159 (259)
T ss_dssp ST-SGGGEEEETTTEEEEESTTTGEETTTSSSE-----------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999987443111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......+...|+|||.+.+..++.++||||||+++|||
T Consensus 160 ---------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 160 ---------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp ---------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHH
T ss_pred ---------------------c--------------------cccccccccccccccccccccccccccccccccccccc
Confidence 0 00002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+++..||..+|.+|||+.+|++
T Consensus 199 ~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 199 LTLGKFPFSDYDN-EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTSSGTTTTSCH-HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccc-ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 98 5554432 3334444444333333333445569999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=239.42 Aligned_cols=201 Identities=15% Similarity=0.158 Sum_probs=145.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++.+++.++.|
T Consensus 67 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 142 (314)
T cd05099 67 EMELMKLIGKHKNIINLLG-VCTQ---EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQ 142 (314)
T ss_pred HHHHHHhccCCCCeeeEEE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHH
Confidence 44466666 6999999887 5532 2346667766 689999999432 134788899999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||.|||++||+||||||+||+++.++.++++|||.++........
T Consensus 143 i~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------- 190 (314)
T cd05099 143 VARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------------------------- 190 (314)
T ss_pred HHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999988543211000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
.. .....++..|+|||.+.+..++
T Consensus 191 ---------------------------------------------------~~-----~~~~~~~~~y~aPE~~~~~~~~ 214 (314)
T cd05099 191 ---------------------------------------------------KK-----TSNGRLPVKWMAPEALFDRVYT 214 (314)
T ss_pred ---------------------------------------------------cc-----cccCCCCccccCHHHHccCCcC
Confidence 00 0001234579999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|+|++ ||.... .......+.....+...........+++.+||..+|++|||+.++++
T Consensus 215 ~~~DiwslG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 215 HQSDVWSFGILMWEIFTLGGSPYPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred ccchhhHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999999999997 454322 22333333333222222223345569999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=217.23 Aligned_cols=209 Identities=15% Similarity=0.215 Sum_probs=156.4
Q ss_pred eccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.|+..+|..+. ||||+++++ +..+.....+-.+.++....+...+. +.++..+++.++.||+.||+|||++||+
T Consensus 80 kREikIL~nL~gg~NIi~L~D-iV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GIm 154 (338)
T KOG0668|consen 80 KREIKILQNLRGGPNIIKLLD-IVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIM 154 (338)
T ss_pred HHHHHHHHhccCCCCeeehhh-hhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcc
Confidence 37777888875 999999999 55555555555666666788877754 4488899999999999999999999999
Q ss_pred eccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||+||.|++|+.. ..+++||+|++..+.... +
T Consensus 155 HRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~---------------------------------e------------- 188 (338)
T KOG0668|consen 155 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---------------------------------E------------- 188 (338)
T ss_pred cccCCcceeeechhhceeeeeecchHhhcCCCc---------------------------------e-------------
Confidence 99999999999954 569999999984331110 0
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
-...+.+..|.-||.+...+ |+.+-|+|||||+|
T Consensus 189 ---------------------------------------------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcml 223 (338)
T KOG0668|consen 189 ---------------------------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 223 (338)
T ss_pred ---------------------------------------------eeeeeehhhcCCchheeechhccccHHHHHHHHHH
Confidence 01145678899999998766 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---------------cCCCchh--------------------hh-cCchhHHHHH
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---------------RVLPPQL--------------------LL-KFPKEASFCL 303 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---------------~~~~~~~--------------------~~-~~~~~~~li~ 303 (712)
..|+. ||+.+.......-.+.+ -.+++.+ .. ..|+..+|+.
T Consensus 224 A~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlld 303 (338)
T KOG0668|consen 224 ASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLD 303 (338)
T ss_pred HHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHH
Confidence 99998 88866443333221110 0111111 01 1256679999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|.+|..+|+|+.|++.||||.....
T Consensus 304 klLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 304 KLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred HHHhhccccccchHHHhcCchHHHHHH
Confidence 999999999999999999999986543
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=235.58 Aligned_cols=206 Identities=20% Similarity=0.155 Sum_probs=145.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|+.++|||++++++.++ ......+++++|+ .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~iv~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H 131 (284)
T cd05081 54 REIEILKSLQHDNIVKYKGVCY--SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVH 131 (284)
T ss_pred HHHHHHHhCCCCCeeEEEEEEc--cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4555788899999999877333 2233456777776 589999999654445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++....... .+
T Consensus 132 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~-------------- 164 (284)
T cd05081 132 RDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY-------------- 164 (284)
T ss_pred ccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc--------------
Confidence 9999999999999999999999884321110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
... .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ---------------------------------------~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 204 (284)
T cd05081 165 ---------------------------------------YKV-REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204 (284)
T ss_pred ---------------------------------------eee-cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 000 0001234569999999888899999999999999999
Q ss_pred hCCCCCChhh-HHHH-----------------HhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTGEEK-TRTM-----------------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++........ .... ..+.....++..........+|+.+||..+|++|||+.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 205 FTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9821111000 0000 111111111111222345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=231.19 Aligned_cols=203 Identities=19% Similarity=0.243 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++|+|++++++ ++.. ...+++++++ .+++|.+++... ..+++..+..++.||+.||.|||+.||+|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (254)
T cd06627 48 QEIDLLKNLKHPNIVKYIG-SIET---SDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIH 122 (254)
T ss_pred HHHHHHHhCCCCCccEEEE-EEEe---CCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 3444578889999999877 3322 2456677776 688999999554 45899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.........
T Consensus 123 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 155 (254)
T cd06627 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKD----------------------------------------------- 155 (254)
T ss_pred CCCCHHHEEECCCCCEEEeccccceecCCCccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+..++.++|||+||+++|+|
T Consensus 156 -------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l 192 (254)
T cd06627 156 -------------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIEL 192 (254)
T ss_pred -------------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHH
Confidence 0013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... ..+........+.......+...+++.+||..+|++|||+.+++.||||
T Consensus 193 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 193 LTGNPPYYDLNPM-AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HhCCCCCCCccHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99 55443332 2222333333333222333455699999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=236.41 Aligned_cols=201 Identities=16% Similarity=0.177 Sum_probs=147.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------CCCCChhH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVYE 83 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------------~~~l~~~~ 83 (712)
+..+|+.++||||+++++ .+.. ....++++++ .+++|.+++... ...+++..
T Consensus 53 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 128 (290)
T cd05045 53 EFNLLKQVNHPHVIKLYG-ACSQ---DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGD 128 (290)
T ss_pred HHHHHhhCCCCCEeeEEE-EEec---CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHH
Confidence 455788899999999887 4422 2334555555 689999998431 13478889
Q ss_pred HHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
++.++.||+.||.|||+.||+||||||+||+++.++.++++|||+++......
T Consensus 129 ~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~--------------------------- 181 (290)
T cd05045 129 LISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED--------------------------- 181 (290)
T ss_pred HHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc---------------------------
Confidence 99999999999999999999999999999999999999999999874321110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
+. .......++..|+|||.
T Consensus 182 ------~~-------------------------------------------------------~~~~~~~~~~~y~apE~ 200 (290)
T cd05045 182 ------SY-------------------------------------------------------VKRSKGRIPVKWMAIES 200 (290)
T ss_pred ------ch-------------------------------------------------------hcccCCCCCccccCHHH
Confidence 00 00000234668999999
Q ss_pred ccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 244 LAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 244 ~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
+.+..++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||..+|.+||++.++
T Consensus 201 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 201 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 988889999999999999999997 554332 233334433333222222333456699999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 280 ~~ 281 (290)
T cd05045 280 SK 281 (290)
T ss_pred HH
Confidence 76
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=238.51 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=147.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|||++++++ .+... ..+++++++.+++|.+++......+++..+..++.||+.||.|||++||+|+
T Consensus 58 ~e~~~~~~l~h~niv~~~~-~~~~~---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~ 133 (303)
T cd05110 58 DEALIMASMDHPHLVRLLG-VCLSP---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 133 (303)
T ss_pred HHHHHHHhCCCCCcccEEE-EEcCC---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 3455788899999999888 44322 2334444557899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++........ +
T Consensus 134 dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~--------------- 166 (303)
T cd05110 134 DLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y--------------- 166 (303)
T ss_pred ccccceeeecCCCceEEccccccccccCcccc--------------------------------c---------------
Confidence 99999999999999999999988533111000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~ 205 (303)
T cd05110 167 -----------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205 (303)
T ss_pred -----------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 000023467899999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.....++..........+++.+|+..+|++||++.++++
T Consensus 206 t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 206 TFGGKPYDGIPT-REIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred hCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 5543321 1222222222222222223345668999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=232.76 Aligned_cols=202 Identities=13% Similarity=0.169 Sum_probs=150.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.|++.||+|||+.||+|+
T Consensus 56 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 131 (268)
T cd05063 56 EASIMGQFSHHNIIRLEG-VVTK---FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHR 131 (268)
T ss_pred HHHHHhcCCCCCeeEEEE-EEcc---CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 345688899999999887 4432 2355677766 6889999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++......... .+
T Consensus 132 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~~--------------- 165 (268)
T cd05063 132 DLAARNILVNSNLECKVSDFGLSRVLEDDPEG-------------------------------TY--------------- 165 (268)
T ss_pred ccchhhEEEcCCCcEEECCCccceeccccccc-------------------------------ce---------------
Confidence 99999999999999999999987432111000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......+..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell 204 (268)
T cd05063 166 -----------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 204 (268)
T ss_pred -----------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHH
Confidence 000012245799999998888999999999999999988
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ...+..+......+......+...+++.+||..+|.+||++.++++
T Consensus 205 ~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 205 SFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred hCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6 5543332 2344444443333333334455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=231.75 Aligned_cols=201 Identities=15% Similarity=0.188 Sum_probs=148.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ ++.. ...+++++++ .+++|.+++......+++..++.++.|++.+|.|||+.|++|+
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~ 124 (256)
T cd05112 49 EAQVMMKLSHPKLVQLYG-VCTE---RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHR 124 (256)
T ss_pred HHHHHHhCCCCCeeeEEE-EEcc---CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445788899999999887 4422 2356677776 6899999996554558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+.....
T Consensus 125 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05112 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYT------------------------------------------------ 156 (256)
T ss_pred ccccceEEEcCCCeEEECCCcceeecccCccc------------------------------------------------
Confidence 99999999999999999999987433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 157 -----------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred -----------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHH
Confidence 000023456899999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||.... .......+.....+...........+|+.+||..+|.+|||+.+++++
T Consensus 196 ~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 196 SEGKTPYENRS-NSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred cCCCCCCCcCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 7 454322 223333333322211111123445599999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=226.82 Aligned_cols=204 Identities=19% Similarity=0.261 Sum_probs=160.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..-.||-+..+-+ .+ ...+++|.|||| .||.|.-.| ++.+.+++..++.+-..|+.||.|||+++||.|
T Consensus 218 E~RVL~~~~HPFLt~LKY-sF---Qt~drlCFVMeyanGGeLf~HL-srer~FsE~RtRFYGaEIvsAL~YLHs~~ivYR 292 (516)
T KOG0690|consen 218 ENRVLQNCRHPFLTSLKY-SF---QTQDRLCFVMEYANGGELFFHL-SRERVFSEDRTRFYGAEIVSALGYLHSRNIVYR 292 (516)
T ss_pred HHHHHHhccCcHHHHhhh-hh---ccCceEEEEEEEccCceEeeeh-hhhhcccchhhhhhhHHHHHHhhhhhhCCeeee
Confidence 344577788998766544 22 456789999999 699999888 345569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||.+|.|++.+|++||.|||+|+.--.. | +
T Consensus 293 DlKLENLlLDkDGHIKitDFGLCKE~I~~----g-----------------------------~---------------- 323 (516)
T KOG0690|consen 293 DLKLENLLLDKDGHIKITDFGLCKEEIKY----G-----------------------------D---------------- 323 (516)
T ss_pred echhhhheeccCCceEeeecccchhcccc----c-----------------------------c----------------
Confidence 99999999999999999999999531110 0 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+....+|||.|.|||++....|+.++|+|.+||++|||+
T Consensus 324 -----------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm 362 (516)
T KOG0690|consen 324 -----------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM 362 (516)
T ss_pred -----------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHH
Confidence 011268999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhc-c-cCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~~ 330 (712)
| ||...+.. .....+. . -.+|. ...+++..|+..+|..||.+|. .+.||.+|+||.....
T Consensus 363 CGRLPFyn~dh~-kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 363 CGRLPFYNKDHE-KLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred hccCcccccchh-HHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 9 78765433 2222221 1 12332 2346667999999999999996 4899999999998754
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=247.67 Aligned_cols=200 Identities=19% Similarity=0.235 Sum_probs=155.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|.-++.+++|||||++|| +. ....+++|+||+ .||+|.++|++....++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yG-Va---~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYG-VA---VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEE-EE---cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 4555778899999999888 44 344688999998 599999999777667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|+|++.++.+||+|||+++.-...... . +
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~-------------------------------~-------------~- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK-------------------------------K-------------F- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceeec-------------------------------c-------------c-
Confidence 999999999999999999999997321100000 0 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
...-...|+|||.+....|++++||||+||++||+
T Consensus 321 ---------------------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ---------------------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ---------------------------------------------cccCcceecChhhhccCccccccchhheeeeEEee
Confidence 00114569999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchh-HHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.+.... .+...+....++...+...|.. ..++.+|+..+|+.|||+.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 77765554 4445553333333333344444 47889999999999999999866
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-26 Score=245.83 Aligned_cols=200 Identities=18% Similarity=0.234 Sum_probs=151.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
|...|+.-.|.||+-+.| ++- ...+.|+..+ .|.+|..+|.....+|.....+.|++||++|++|||.++||||
T Consensus 438 EVa~lkkTRH~NIlLFMG-~~~----~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHr 512 (678)
T KOG0193|consen 438 EVAVLKKTRHENILLFMG-ACM----NPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHR 512 (678)
T ss_pred HHHHHhhcchhhheeeeh-hhc----CCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 344789999999988777 542 2234666666 5999999997666779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..||++..++.|||.|||++.....- .+
T Consensus 513 DLKSnNIFl~~~~kVkIgDFGLatvk~~w-------------------------------------------------~g 543 (678)
T KOG0193|consen 513 DLKSNNIFLHEDLKVKIGDFGLATVKTRW-------------------------------------------------SG 543 (678)
T ss_pred hccccceEEccCCcEEEecccceeeeeee-------------------------------------------------cc
Confidence 99999999999999999999987321110 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvll~ 263 (712)
.++ .....|...|||||+++.+ +|++.||||||||++|
T Consensus 544 -----------------------------------~~q----~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~Y 584 (678)
T KOG0193|consen 544 -----------------------------------EQQ----LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWY 584 (678)
T ss_pred -----------------------------------ccc----cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHH
Confidence 000 0013467789999999754 4999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCch---hhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||+| ||. .......+-.+..+...+. .....+ +..+|+..||..++++||.+.+||.
T Consensus 585 ELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 585 ELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 9999 777 4444344434444433332 233445 4459999999999999999999887
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=232.05 Aligned_cols=201 Identities=17% Similarity=0.221 Sum_probs=149.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..++..++|+|++++++ .+.. ...+++++++ .|++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 51 KEIDLLKQLNHPNVIKYYA-SFIE---DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred HHHHHHHHccCCchhhhhh-eeEe---CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3456788899999999888 3322 2345666666 68999998842 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+........
T Consensus 127 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08229 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+.+..++.++|+||||+++
T Consensus 162 ---------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 196 (267)
T cd08229 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChhh-HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||...... ......+.....++.... ..+...+++.+||..+|.+|||+.+|++
T Consensus 197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 197 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 99998 55433221 222233333333333222 2345559999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=230.58 Aligned_cols=200 Identities=20% Similarity=0.272 Sum_probs=150.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCC-CChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~-l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+...+..++|+|++++++ .+.+. ..+++++++ .+++|.+++...... +++.+++.++.||+.||.|||+.||+|
T Consensus 51 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h 126 (258)
T smart00219 51 EARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIH 126 (258)
T ss_pred HHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 345677789999999888 44222 345666666 689999999554333 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++.........
T Consensus 127 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (258)
T smart00219 127 RDLAARNCLVGENLVVKISDFGLSRDLYDDDYY----------------------------------------------- 159 (258)
T ss_pred cccccceEEEccCCeEEEcccCCceeccccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l 197 (258)
T smart00219 160 ------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEI 197 (258)
T ss_pred ------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHH
Confidence 00001257789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.. .........+.....+...........+++.+||..+|.+|||+.++++
T Consensus 198 ~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 198 FTLGESPYPG-MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhCCCCCCCC-CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 87 3332 2333344444444433333334455569999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-26 Score=240.88 Aligned_cols=204 Identities=16% Similarity=0.210 Sum_probs=166.3
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
++-....|-||++|. .|.+.. +.|++++-+.||.|...|+.++. ++...++.|+..+++|++|||++|||.|||||
T Consensus 473 Im~~~~s~fIvrLYr-Tfrd~k--yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP 548 (732)
T KOG0614|consen 473 IMMECRSDFIVRLYR-TFRDSK--YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIYRDLKP 548 (732)
T ss_pred HHHhcCchHHHHHHH-Hhccch--hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence 455566888999887 564433 33445555579999999977665 99999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+|.+++..|-+|+.|||+++..|...
T Consensus 549 ENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------------ 574 (732)
T KOG0614|consen 549 ENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------------ 574 (732)
T ss_pred hheeeccCCceEEeehhhHHHhccCC------------------------------------------------------
Confidence 99999999999999999997654331
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
+....+|||.|.|||++.....+.++|.|+||+++||||+
T Consensus 575 -------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 575 -------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred -------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence 1112689999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
||. ..+....+..+.+++-...++...++.+ ++|+++...+|.+|.. +.+|-+|.||.....
T Consensus 618 PFs-~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 618 PFS-GVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred CCC-CCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 554 4455567777777765555556666555 9999999999999985 899999999998754
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=236.33 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=146.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------CCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qil~~l~ 96 (712)
+..++..+.|||++++++ ++..+ ..+++++++ .+++|.++|.... ..+++..++.++.||+.||+
T Consensus 69 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~ 144 (296)
T cd05051 69 EVKILSRLSDPNIARLLG-VCTVD---PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMR 144 (296)
T ss_pred HHHHHHhcCCCCEeEEEE-EEecC---CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHH
Confidence 455788899999999887 44322 456677766 6899999984432 25899999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.||+||||||+||+++.++.++++|||++........ +.
T Consensus 145 ~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~~---- 187 (296)
T cd05051 145 YLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY---------------------------------YR---- 187 (296)
T ss_pred HHHHcCccccccchhceeecCCCceEEccccceeecccCcc---------------------------------ee----
Confidence 99999999999999999999999999999998743211100 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
......++..|+|||.+.+..++.++|||
T Consensus 188 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 216 (296)
T cd05051 188 ---------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDVW 216 (296)
T ss_pred ---------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccchhh
Confidence 00013457789999999888899999999
Q ss_pred HHHHHHHHhhC-----CCCCChhhHHHHHhhccc-------CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~-----pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||...... ..+..+... ...+..........+++.+||+.+|.+|||+.++++
T Consensus 217 slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 217 AFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 99999999986 44332221 222222211 111111112245569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=234.98 Aligned_cols=202 Identities=15% Similarity=0.132 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------------CCCCChhHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVYEC 84 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------------~~~l~~~~~ 84 (712)
++..+++.++|||++++++ ++.+ ...+++++|+ .+++|.+++... ...+++.++
T Consensus 57 ~ei~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (288)
T cd05050 57 REAALMAEFDHPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132 (288)
T ss_pred HHHHHHHhcCCCchheEEE-EEcC---CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHH
Confidence 3555788899999999887 5533 2356777777 688999999421 124678889
Q ss_pred HHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhh
Q 005147 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (712)
+.++.||+.||+|||++|++||||||+||+++.++.++++|||++........
T Consensus 133 ~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------- 185 (288)
T cd05050 133 LCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY--------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc---------------------------
Confidence 99999999999999999999999999999999999999999998743211100
Q ss_pred hccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc
Q 005147 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (712)
Q Consensus 165 ~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (712)
+ . .......+..|+|||.+
T Consensus 186 ------~----------------------~---------------------------------~~~~~~~~~~y~aPE~~ 204 (288)
T cd05050 186 ------Y----------------------K---------------------------------ASENDAIPIRWMPPESI 204 (288)
T ss_pred ------c----------------------c---------------------------------ccCCCccChhhcCHHHH
Confidence 0 0 00001235579999999
Q ss_pred cCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 245 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 245 ~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
.+..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.+|.+|||+.|++
T Consensus 205 ~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 205 FYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-EEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred hcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 88889999999999999999986 5543332 233344444333322223345566999999999999999999987
Q ss_pred c
Q 005147 321 Q 321 (712)
Q Consensus 321 ~ 321 (712)
+
T Consensus 284 ~ 284 (288)
T cd05050 284 R 284 (288)
T ss_pred H
Confidence 6
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=229.13 Aligned_cols=201 Identities=19% Similarity=0.236 Sum_probs=153.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++.+++ .++ .....++++++. +++|.+++.... .+++.++..++.||+.||.|||++|++|+
T Consensus 43 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~ 117 (250)
T cd05123 43 ERNILSRINHPFIVKLHY-AFQ---TEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYR 117 (250)
T ss_pred HHHHHHHcCCCcHHHHHH-Hee---cCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 345788899999999887 442 334567777775 999999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+....... +
T Consensus 118 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~---------------- 148 (250)
T cd05123 118 DLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S---------------- 148 (250)
T ss_pred CCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C----------------
Confidence 999999999999999999999874321110 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|+||||+++|+|+
T Consensus 149 -----------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 187 (250)
T cd05123 149 -----------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187 (250)
T ss_pred -----------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 000135688899999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH---HHHhcCcCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 325 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~eiL~hp~~ 325 (712)
+ ||..... ......+.... .+..........+++.+||..+|.+||++ .++++||||
T Consensus 188 ~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 188 TGKPPFYAEDR-KEIYEKILKDP-LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9 6654433 22222222211 11111123455699999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=240.73 Aligned_cols=201 Identities=16% Similarity=0.167 Sum_probs=146.2
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+.+++ ++.. ...+++++++ .+++|.++|.+. ...++..+++.++.|
T Consensus 67 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 142 (334)
T cd05100 67 EMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQ 142 (334)
T ss_pred HHHHHHhhcCCCCeeeeeE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence 34466677 8999999888 4432 2345666666 688999999432 224778889999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||.|||++||+||||||+||+++.++.++++|||+++.......
T Consensus 143 i~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--------------------------------- 189 (334)
T cd05100 143 VARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY--------------------------------- 189 (334)
T ss_pred HHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc---------------------------------
Confidence 99999999999999999999999999999999999998854321100
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
++ ......++..|+|||++.+..++
T Consensus 190 ~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 214 (334)
T cd05100 190 YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDRVYT 214 (334)
T ss_pred cc-------------------------------------------------------cccCCCcCceEcCHHHhccCCcC
Confidence 00 00001235679999999988899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||... ........+.....+...........+++.+||+.+|.+|||+.++++
T Consensus 215 ~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 215 HQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred chhhhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999987 44332 223333333333332222233445569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=241.23 Aligned_cols=205 Identities=20% Similarity=0.239 Sum_probs=146.6
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
++..+|..+ +||||+++++ ++.. ....+++++|| .+++|.+++....
T Consensus 59 ~E~~~l~~l~~h~niv~~~~-~~~~--~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (343)
T cd05103 59 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLK 135 (343)
T ss_pred HHHHHHHhccCCccHhhhcc-eeec--CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhh
Confidence 345566777 6899999888 4422 22355666666 6999999984321
Q ss_pred --------------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC
Q 005147 77 --------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF 118 (712)
Q Consensus 77 --------------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~ 118 (712)
..++...+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~ 215 (343)
T cd05103 136 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN 215 (343)
T ss_pred hhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC
Confidence 135777888999999999999999999999999999999999
Q ss_pred CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccc
Q 005147 119 NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVV 198 (712)
Q Consensus 119 ~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (712)
+.++++|||++....... .+
T Consensus 216 ~~~kl~dfg~~~~~~~~~---------------------------------~~--------------------------- 235 (343)
T cd05103 216 NVVKICDFGLARDIYKDP---------------------------------DY--------------------------- 235 (343)
T ss_pred CcEEEEecccccccccCc---------------------------------ch---------------------------
Confidence 999999999884421110 00
Q ss_pred cccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChh
Q 005147 199 LVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEE 274 (712)
Q Consensus 199 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~ 274 (712)
.......++..|+|||.+.+..++.++|||||||++|+|++ ||.....
T Consensus 236 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 287 (343)
T cd05103 236 ----------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 287 (343)
T ss_pred ----------------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence 00000234667999999988889999999999999999985 5543322
Q ss_pred hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 275 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.......+.....+.......+...+++.+||+.+|.+|||+.+|++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 288 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred cHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 222333333332222222233456799999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=229.43 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|+|++++++ ++.+ ....++++|+ .+++|.+++.... ..+++..+..++.|++.||.|||++||+
T Consensus 49 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~ 124 (256)
T cd05039 49 AEASVMTTLRHPNLVQLLG-VVLQ---GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFV 124 (256)
T ss_pred HHHHHHHhcCCcceeeeEE-EEcC---CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3445788899999999888 4432 4556777776 5789999995443 3589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.++......
T Consensus 125 H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 156 (256)
T cd05039 125 HRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------------------------------------ 156 (256)
T ss_pred chhcccceEEEeCCCCEEEccccccccccccc------------------------------------------------
Confidence 99999999999999999999999884321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+..|+|||.+.+..++.++|||||||++|+
T Consensus 157 ---------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~ 191 (256)
T cd05039 157 ---------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ---------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHH
Confidence 00123557999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 192 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 192 IYSFGRVPYPRIP-LKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHhcCCCCCCCCC-HHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 986 444332 22233333332222222222345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=226.87 Aligned_cols=216 Identities=16% Similarity=0.197 Sum_probs=173.1
Q ss_pred hhhhhhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCcccc--------CCCCCCceeeccCCCccceecccCC
Q 005147 468 SRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN--------ERSSINNLGSKEGYSEGRRSGWINP 539 (712)
Q Consensus 468 ~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~l~gh~~~~~~~~~~~~ 539 (712)
+-.+.+...++-.|. ..|...-+..+.||.||..++..+- ...+.-..+|+||++.+.++.| .|
T Consensus 156 ~~~~k~~~~~~l~~S-------Q~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~f-hP 227 (459)
T KOG0272|consen 156 KEALKHLQSLELVCS-------QVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVF-HP 227 (459)
T ss_pred HHHHHHhhhhhhhhh-------hccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEE-cc
Confidence 334445555554443 2344444566778888875433321 1234556799999999999999 77
Q ss_pred CC-CCcEEEEEcCCcEEEEEccC----CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 540 FL-EGLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 540 ~~-~~~~~~~~~~~~~v~~dl~~----~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
.. +..++.++.|....+|.+.+ +++.+|...|..++|+|+|++|+|++.|.+-++||+++.. .....-
T Consensus 228 ~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~-------ElL~QE 300 (459)
T KOG0272|consen 228 VDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS-------ELLLQE 300 (459)
T ss_pred CCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch-------hhHhhc
Confidence 64 44555666666666699987 4566899999999999999999999999999999998732 223467
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+|...|.+|+|+| +|.+++|||.|..-+|||+|+|.++..+.+|.++|.+|+|+| +|..+||||.|++++|||++...
T Consensus 301 GHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 301 GHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred ccccccceeEecC-CCceeeccCccchhheeecccCcEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeecccc
Confidence 8999999999999 699999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred EEEEEe
Q 005147 695 LLLHLV 700 (712)
Q Consensus 695 ~v~~~~ 700 (712)
+++++.
T Consensus 379 ~ly~ip 384 (459)
T KOG0272|consen 379 ELYTIP 384 (459)
T ss_pred cceecc
Confidence 877665
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=236.18 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=141.8
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
+..++|+|++.+++............+++++....++.+.+... ...++..++.|+.||+.||+|||++||+||||||+
T Consensus 77 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~ 155 (294)
T PHA02882 77 IHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPE 155 (294)
T ss_pred hccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 34578999999887222222222234556666666787776433 23678889999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|||++..+.++++|||+++.+...... . .
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~--------------------------------~----------~--------- 184 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKH--------------------------------I----------E--------- 184 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcc--------------------------------c----------c---------
Confidence 999999999999999998544221000 0 0
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
... .......||+.|+|||...+..++.++|||||||++|||++ |
T Consensus 185 ----------------------------~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 185 ----------------------------YSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred ----------------------------ccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 000 00011468999999999999999999999999999999998 6
Q ss_pred CCCChhhHHH--------HHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 269 FSTGEEKTRT--------MSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 269 f~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|......... ...+..... ..........+++..|+..+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 6544221111 111111111 11122234459999999999999999999876
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=234.72 Aligned_cols=201 Identities=16% Similarity=0.174 Sum_probs=145.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------CCCChhHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-----------~~l~~~~~~~i~~qil~~l 95 (712)
+..++..++|+|++.+++ ++. .....++++|+ .+++|.+++.... ..+++..++.++.||+.||
T Consensus 67 ei~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 142 (295)
T cd05097 67 EIKIMSRLKNPNIIRLLG-VCV---SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGM 142 (295)
T ss_pred HHHHHHhCCCCCcCeEEE-EEc---CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHH
Confidence 445788899999999888 442 22356667766 6899999984321 2367889999999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.|||++|++|+||||+||+++.++.+|++|||++........ +
T Consensus 143 ~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~---- 185 (295)
T cd05097 143 KYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY---------------------------------Y---- 185 (295)
T ss_pred HHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------e----
Confidence 999999999999999999999999999999998743211100 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
. ......++..|+|||.+.+..++.++||
T Consensus 186 ----------~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 214 (295)
T cd05097 186 ----------R-----------------------------------------IQGRAVLPIRWMAWESILLGKFTTASDV 214 (295)
T ss_pred ----------e-----------------------------------------ccCcCcCceeecChhhhccCCcCchhhH
Confidence 0 0001245678999999988889999999
Q ss_pred HHHHHHHHHhhC-----CCCCChhhHHHHHhh-------cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~-----pf~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|+|++ ||....... ..... .............+...+|+.+||..+|.+|||+.+|++
T Consensus 215 wSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 215 WAFGVTLWEMFTLCKEQPYSLLSDEQ-VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHHHHcCCCCCCcccChHH-HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999987 554332221 11111 111111112222345669999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=260.22 Aligned_cols=202 Identities=16% Similarity=0.203 Sum_probs=158.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC------CCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~------~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++.++++..+|||||.+++ ++.+ ....+++.+++.||+|..||++. ...++..+.+.++.||+.|+.||++
T Consensus 744 ~Ea~~m~~f~HpNiv~liG-v~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~ 820 (1025)
T KOG1095|consen 744 KEALLMSKFDHPNIVSLIG-VCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES 820 (1025)
T ss_pred HHHHHHhcCCCcceeeEEE-eecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh
Confidence 5677899999999999999 6644 44455666666899999999776 5668999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
+++|||||-..|+||+....|||+|||++++.-..+.. ++
T Consensus 821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yy----r~------------------------------------ 860 (1025)
T KOG1095|consen 821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYY----RK------------------------------------ 860 (1025)
T ss_pred CCCcCcchhhhheeecccCcEEEcccchhHhhhhchhe----ec------------------------------------
Confidence 99999999999999999999999999999753111000 00
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
. ...+-...|||||.+..+.++.++|||||||
T Consensus 861 ------------------------------------------~------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGV 892 (1025)
T KOG1095|consen 861 ------------------------------------------H------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGV 892 (1025)
T ss_pred ------------------------------------------c------CccccceecCCHHHHhhcccccccchhhhHH
Confidence 0 0012245699999999999999999999999
Q ss_pred HHHHhhC----CCCCChhhHHHHH-hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 261 LLFELFC----PFSTGEEKTRTMS-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 261 ll~eLl~----pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|||+|+ ||....+. +.+. .+..+.++ ..........+++..||+.+|++||++..|++
T Consensus 893 llWEifslG~~PY~~~~n~-~v~~~~~~ggRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 893 LLWEIFSLGATPYPSRSNF-EVLLDVLEGGRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHhCCCCCCCCcchH-HHHHHHHhCCccC-CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 9999999 88766655 4444 44444322 22223334459999999999999999999988
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=229.88 Aligned_cols=200 Identities=14% Similarity=0.149 Sum_probs=148.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++++++ ++. ...+++++++ .+++|.+++.. .+..++..+++.++.||+.||+|||+.|++
T Consensus 50 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~ 124 (260)
T cd05067 50 AEANLMKQLQHPRLVRLYA-VVT----QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYI 124 (260)
T ss_pred HHHHHHHhcCCcCeeeEEE-EEc----cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 3455788899999999887 442 2345666666 68999999843 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++.........
T Consensus 125 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05067 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEYT---------------------------------------------- 158 (260)
T ss_pred cccccHHhEEEcCCCCEEEccCcceeecCCCCcc----------------------------------------------
Confidence 9999999999999999999999987432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05067 159 -------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 195 (260)
T ss_pred -------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHH
Confidence 0000234678999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....++..........+++.+||..+|++|||+++++.
T Consensus 196 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 196 IVTYGRIPYPGMTN-PEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHhCCCCCCCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 997 5543332 2233333333222222222345569999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=230.67 Aligned_cols=202 Identities=15% Similarity=0.150 Sum_probs=146.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC------CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~------~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
.+..+++.++||||+++++ ++.. ....++++++ .|++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (269)
T cd05044 48 KEAHLMSNFNHPNIVKLLG-VCLL---NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE 123 (269)
T ss_pred HHHHHHHhcCCCCeeeEee-eecC---CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 3455788899999999887 4432 2345666665 78999999943 2234788999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC-----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~-----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
+.|++|+||||+||+++.++ .++++|||++........ +
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~--- 167 (269)
T cd05044 124 QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y--- 167 (269)
T ss_pred hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c---
Confidence 99999999999999999877 899999998743211100 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
. ......++..|+|||.+.+..++.++|
T Consensus 168 -----------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~D 195 (269)
T cd05044 168 -----------------------------------------------R-----KEGEGLLPVRWMAPESLLDGKFTTQSD 195 (269)
T ss_pred -----------------------------------------------c-----cCcccCCCccccCHHHHccCCcccchh
Confidence 0 000023467899999999888999999
Q ss_pred hHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||..... ......+.....+.......+...+++.+||..+|.+||++.++++
T Consensus 196 v~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 196 VWSFGVLMWEILTLGQQPYPALNN-QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHHHHHHcCCCCCcccCH-HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999986 4543332 2233333322222222222344559999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=231.70 Aligned_cols=201 Identities=14% Similarity=0.111 Sum_probs=149.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|||++++++ ++.. ...++++|+ .+++|.+++......+++..+..++.||+.||+|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H 132 (279)
T cd05057 58 DEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVH 132 (279)
T ss_pred HHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 4556788899999999888 4432 345556655 699999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.++....... .+
T Consensus 133 ~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~-------------- 166 (279)
T cd05057 133 RDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY-------------- 166 (279)
T ss_pred cccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce--------------
Confidence 99999999999999999999998854321100 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+....++.++|||||||++|||
T Consensus 167 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05057 167 ------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWEL 204 (279)
T ss_pred ------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHH
Confidence 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+......+..........+++.+||..+|..|||+.++++
T Consensus 205 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 205 MTFGAKPYEGIPA-VEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 97 4443322 2223333333222222233455669999999999999999999866
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=228.88 Aligned_cols=201 Identities=20% Similarity=0.251 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++|+|++.+++ .+.. ...+++++|+ .|++|.+++.. ....+++.+++.++.||+.||.|||+.|
T Consensus 51 ~ei~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 51 KEIDLLKQLDHPNVIKYLA-SFIE---NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred HHHHHHHhCCCCCeeeeee-eeec---CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456788899999999888 4432 2456777776 68899998842 3445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||+|+||+++.++.++++|||.+........
T Consensus 127 i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08224 127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred EecCCcChhhEEECCCCcEEEeccceeeeccCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......++..|+|||.+.+..++.++|||||||++
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 196 (267)
T cd08224 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred HHhhC---CCCCCh-hhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGE-EKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||.... ........+.....++... .......+++.+||..+|.+|||+.+|++
T Consensus 197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 197 YEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99998 554332 1223333444444444333 22334559999999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=230.35 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=147.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ .+. ....+++++|+ .+++|.+++......+++.+++.++.|++.||.|||++|++|+
T Consensus 55 e~~~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~ 130 (269)
T cd05065 55 EASIMGQFDHPNIIHLEG-VVT---KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHR 130 (269)
T ss_pred HHHHHHhCCCcCcceEEE-EEC---CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 445778899999999887 442 23456777776 6889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.......... .+
T Consensus 131 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------------------~~--------------- 165 (269)
T cd05065 131 DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP------------------------------TY--------------- 165 (269)
T ss_pred ccChheEEEcCCCcEEECCCccccccccCcccc------------------------------cc---------------
Confidence 999999999999999999999874321110000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. .......+..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -------------------------------------~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l 205 (269)
T cd05065 166 -------------------------------------T---SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 205 (269)
T ss_pred -------------------------------------c---cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHh
Confidence 0 000011245799999998888999999999999999987
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 206 ~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 206 SYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 55443322 223333222222222223344558999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-25 Score=229.28 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=148.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++ ++. ....+++++++ .+++|.+++.. .+..+++.+++.++.||+.||.|||++||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~ 125 (261)
T cd05034 50 QEAQIMKKLRHDKLVQLYA-VCS---EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYI 125 (261)
T ss_pred HHHHHHhhCCCCCEeeeee-eee---cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3445688899999999887 432 22346777776 68999999954 335689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+...+.....
T Consensus 126 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 159 (261)
T cd05034 126 HRDLAARNILVGENLVCKIADFGLARLIEDDEYT---------------------------------------------- 159 (261)
T ss_pred cCCcchheEEEcCCCCEEECccccceeccchhhh----------------------------------------------
Confidence 9999999999999999999999987433211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 196 (261)
T cd05034 160 -------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE 196 (261)
T ss_pred -------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence 0000123567999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+......+..........+++.+||..+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 197 IVTYGRVPYPGMTN-REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 997 5543332 2333333333222222223345569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-25 Score=233.89 Aligned_cols=220 Identities=19% Similarity=0.220 Sum_probs=154.1
Q ss_pred ceeeccCC-CCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 29 GVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 29 ~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
..++..+. |+||+++++ ++. ....+++++++. +++|.+++.+.. .+++..++.|+.||+.||.|||+.|++|+
T Consensus 52 ~~~~~~l~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~ 126 (280)
T cd05581 52 KEVLTRLNGHPGIIKLYY-TFQ---DEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHR 126 (280)
T ss_pred HHHHHhcccCCCchhHHH-Hhc---CCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 34566777 999999877 442 234567777775 999999996554 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+......... .+. +
T Consensus 127 dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~--------------------------~~~--------------~ 166 (280)
T cd05581 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK--------------------------GDA--------------T 166 (280)
T ss_pred CCCHHHeEECCCCCEEecCCccccccCCccccccCC--------------------------CCC--------------c
Confidence 999999999999999999999886543321110000 000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...... ...........++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 167 ---------~~~~~~---------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~ 216 (280)
T cd05581 167 ---------NIDSQI---------------------EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML 216 (280)
T ss_pred ---------cccccc---------------------cccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH
Confidence 000000 00000011246788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 325 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~ 325 (712)
+ ||...... ........... .......+...+|+.+||..+|.+|||+ .++++||||
T Consensus 217 ~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 217 TGKPPFRGSNEY-LTFQKILKLEY-SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred hCCCCCCCccHH-HHHHHHHhcCC-CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 9 44433322 22222221111 1111123455699999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=231.59 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=148.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-------CCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-------~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+++.++|+|++++++ ++... ....++++++ .+++|.+++.... ..+++.+++.++.||+.||+||
T Consensus 57 ~e~~~l~~l~h~ni~~~~~-~~~~~--~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L 133 (280)
T cd05043 57 QESCLLYGLSHQNILPILH-VCIED--GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL 133 (280)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEecC--CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3445678889999999887 43222 2345566665 6899999984321 4589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++|++|+||||+||+++.++.+|++|||+++.+...... .
T Consensus 134 H~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~----------------------------------~----- 174 (280)
T cd05043 134 HKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH----------------------------------C----- 174 (280)
T ss_pred HHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE----------------------------------E-----
Confidence 9999999999999999999999999999988543211000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......++..|+|||.+.+..++.++|||||
T Consensus 175 -------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl 205 (280)
T cd05043 175 -------------------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSF 205 (280)
T ss_pred -------------------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHh
Confidence 0000234667999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++||+++ ||..... ......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 206 G~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 206 GVLLWELMTLGQTPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHHHHHhcCCCCCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999996 5543322 2233333333222222222345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=230.15 Aligned_cols=201 Identities=15% Similarity=0.182 Sum_probs=140.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----CCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+...++.++|+||+++++ .+. ....+++++|+ .+++|.++|.... ...++..++.++.||+.||+|||++|
T Consensus 45 e~~~~~~l~h~nii~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 45 EVQPYRELNHPNVLQCLG-QCI---ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred HHHHHHhCCCCCcceEEE-EEC---CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 445677899999999887 442 23457777777 5899999994432 22467788999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+|++|||++........ +
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~----------- 156 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY---------------------------------Y----------- 156 (269)
T ss_pred EecccccHhheEecCCCcEEEeccccccccccchh---------------------------------e-----------
Confidence 99999999999999999999999998743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------CCCCCccch
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDI 255 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDI 255 (712)
.......++..|+|||++.. ..++.++||
T Consensus 157 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 192 (269)
T cd05042 157 --------------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNI 192 (269)
T ss_pred --------------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHH
Confidence 00000235677999998743 347889999
Q ss_pred HHHHHHHHHhhC----CCCCChhhHHHHHhhcccC---CCchhhhcCch-hHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|||++ ||............+.... ..+......+. ...++..|+ .||.+|||+++|++
T Consensus 193 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 193 WSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 999999999997 4544433322222222221 11222223333 347888888 59999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-25 Score=233.15 Aligned_cols=201 Identities=16% Similarity=0.169 Sum_probs=143.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------CCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qil~~l~ 96 (712)
+..++..++|+||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.++..++.||+.||+
T Consensus 69 E~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~ 144 (296)
T cd05095 69 EIKIMSRLKDPNIIRLLA-VCIT---SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMK 144 (296)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHH
Confidence 445688899999999888 4422 2346777776 5899999984321 23677889999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||++||+|+||||+||+++.++.++++|||++........ +
T Consensus 145 ~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----- 186 (296)
T cd05095 145 YLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY---------------------------------Y----- 186 (296)
T ss_pred HHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc---------------------------------e-----
Confidence 99999999999999999999999999999998743211100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
. ......++..|++||...++.++.++|||
T Consensus 187 ---------~-----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 187 ---------R-----------------------------------------IQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred ---------e-----------------------------------------ccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 0 00002346779999998888899999999
Q ss_pred HHHHHHHHhhC-----CCCCChhhHHHHHhh-------cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~-----pf~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||....... .+... ......+......+...+|+.+||+.+|.+||++.+|++
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999986 454332221 11111 111111111222345569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=229.82 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=147.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------CCCChhHHHHHHHHHHHHHHHh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------~~l~~~~~~~i~~qil~~l~~l 98 (712)
+..+|+.+.|+|++++++ ++.+ ....++++|+ .+++|.+++.... ..+++..++.++.||+.||.||
T Consensus 58 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L 133 (275)
T cd05046 58 ELDMFRKLSHKNVVRLLG-LCRE---AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL 133 (275)
T ss_pred HHHHHHhcCCcceeeeEE-EECC---CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 445788899999999887 4422 2345677776 5899999994332 1489999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++..+.++++|||++.........
T Consensus 134 H~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~---------------------------------------- 173 (275)
T cd05046 134 SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY---------------------------------------- 173 (275)
T ss_pred hhcCcccCcCccceEEEeCCCcEEEcccccccccCccccc----------------------------------------
Confidence 9999999999999999999999999999877322110000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......++..|+|||.+.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl 204 (275)
T cd05046 174 -------------------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSF 204 (275)
T ss_pred -------------------------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHH
Confidence 0000234667999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|++ ||...... ...........+....... ....+++.+||+.+|.+|||+.+++..
T Consensus 205 G~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 205 GVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 999999997 55433222 2333333222221112223 344599999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=255.40 Aligned_cols=100 Identities=10% Similarity=0.099 Sum_probs=84.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+.+++ ++. ....+|++||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||||
T Consensus 53 ~E~~~l~~l~hp~Iv~~~~-~~~---~~~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiH 127 (669)
T cd05610 53 AERDALALSKSPFIVHLYY-SLQ---SANNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHGIIH 127 (669)
T ss_pred HHHHHHHhcCCCCcCeEEE-EEE---ECCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 3444677889999999876 432 23467788887 5999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccC
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSD 131 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~ 131 (712)
|||||+||||+.++.++|+|||+++.
T Consensus 128 rDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 128 RDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=227.90 Aligned_cols=199 Identities=17% Similarity=0.182 Sum_probs=139.6
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+++.++|||++++++ .+.. ...+++++|+ .+++|.+++.+. ...+++..++.++.||+.||+|||++||+|
T Consensus 47 ~~~~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 122 (268)
T cd05086 47 DPYRILQHPNILQCLG-QCVE---AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLH 122 (268)
T ss_pred HHHhccCCcchhheEE-EecC---CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4567789999999888 4432 2456777777 589999999542 234677788899999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...... ++
T Consensus 123 ~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~-------------- 154 (268)
T cd05086 123 SDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY-------------- 154 (268)
T ss_pred cCCccceEEEcCCccEEecccccccccCcc----------------------------------hh--------------
Confidence 999999999999999999999986321000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------CCCCCccchHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRL 258 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSl 258 (712)
........++..|+|||++.. ..++.++|||||
T Consensus 155 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 194 (268)
T cd05086 155 ----------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWAL 194 (268)
T ss_pred ----------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHH
Confidence 000001356888999998743 235789999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccC---CCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++|||++ ||............+.... ..+.... ..+...+++..|+ .+|.+||++.+|++
T Consensus 195 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 195 GVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999999986 5544333222222222211 1122222 2334458899999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=231.74 Aligned_cols=207 Identities=17% Similarity=0.208 Sum_probs=150.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ +|+||+.+++ .+.. ...+++++|+ .+++|.+++.... .+++..+..++.||+.||.|||++|++|
T Consensus 54 e~~~l~~l~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i~H 128 (290)
T cd05613 54 ERQVLEHIRQSPFLVTLHY-AFQT---DTKLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGIIY 128 (290)
T ss_pred HHHHHHhcccCCChhceee-Eeec---CCeEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 44566777 6899999776 4432 2356677777 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||++.........
T Consensus 129 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 161 (290)
T cd05613 129 RDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE----------------------------------------------- 161 (290)
T ss_pred cCCCHHHeEECCCCCEEEeeCccceeccccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+. .++.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 162 ------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred ------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHH
Confidence 00013578899999998753 3788999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+|++ ||.... ........+.... ++......+...+++.+||..+|.+|| ++.+++.||||....
T Consensus 200 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 200 ELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 9999 443211 1111122221111 121122234456999999999999997 899999999998865
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-25 Score=226.61 Aligned_cols=199 Identities=13% Similarity=0.140 Sum_probs=147.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++++++ .+.. ..+++++++ .+++|.+++.+ ....+++..++.++.||+.||.|||+.|++|
T Consensus 51 e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (260)
T cd05073 51 EANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 125 (260)
T ss_pred HHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 445788999999999877 3322 346677776 58899999954 3445788899999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++..+.++++|||.+.........
T Consensus 126 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 158 (260)
T cd05073 126 RDLRAANILVSASLVCKIADFGLARVIEDNEYT----------------------------------------------- 158 (260)
T ss_pred cccCcceEEEcCCCcEEECCCcceeeccCCCcc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l 196 (260)
T cd05073 159 ------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 196 (260)
T ss_pred ------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHH
Confidence 00002345679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+......+..........+++.+||..+|++||++.+++.
T Consensus 197 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 197 VTYGRIPYPGMS-NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhcCCCCCCCCC-HHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 97 554332 22333333333322222223345559999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-25 Score=255.60 Aligned_cols=217 Identities=19% Similarity=0.282 Sum_probs=145.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----------CCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+.+++ ++.+ .+..+++|++ .|++|.+++... ...++...++.++.||+.||
T Consensus 51 rEi~ILs~L~HPNIVkl~~-v~~d---~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL 126 (932)
T PRK13184 51 REAKIAADLIHPGIVPVYS-ICSD---GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATI 126 (932)
T ss_pred HHHHHHHhCCCcCcCeEEE-EEee---CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHH
Confidence 4566788999999999887 4432 2456667766 699999988421 12345677899999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
+|||++||+||||||+||+++.++.++++|||++.......-... ..++..
T Consensus 127 ~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~---------------------------~l~~~~-- 177 (932)
T PRK13184 127 EYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL---------------------------DIDVDE-- 177 (932)
T ss_pred HHHHHCCccccCCchheEEEcCCCCEEEEecCcceeccccccccc---------------------------cccccc--
Confidence 999999999999999999999999999999999865421100000 000000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
...+ . .........+||+.|+|||.+.+..++.++||
T Consensus 178 -------~~s~-------~-----------------------------s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI 214 (932)
T PRK13184 178 -------RNIC-------Y-----------------------------SSMTIPGKIVGTPDYMAPERLLGVPASESTDI 214 (932)
T ss_pred -------cccc-------c-----------------------------cccccCCCCCCCCCCCCHHHhcCCCCCcHhHH
Confidence 0000 0 00000011479999999999999999999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCch---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|||++ ||............ ....|.. .....+...+++.+||..||++||+..+.+.
T Consensus 215 WSLGVILyELLTG~~PF~~~~~~ki~~~~--~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 215 YALGVILYQMLTLSFPYRRKKGRKISYRD--VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhhhhhh--hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999 55443222111111 1111111 1122344558999999999999987655443
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.9e-25 Score=227.17 Aligned_cols=205 Identities=14% Similarity=0.092 Sum_probs=145.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~ 97 (712)
++..+++.++|||++++++ ++...... ...++++++ .+++|.+++.. ....++...++.++.||+.||+|
T Consensus 50 ~E~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 128 (273)
T cd05074 50 REAACMKEFDHPNVIKLIG-VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY 128 (273)
T ss_pred HHHHHHhcCCCCCcceEEE-EEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3455788999999999887 43322222 123455555 68999888721 12247889999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||+.||+||||||+||+++.++.++++|||+++........ .
T Consensus 129 lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------ 170 (273)
T cd05074 129 LSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R------ 170 (273)
T ss_pred HHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e------
Confidence 99999999999999999999999999999987543211000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
......+++.|++||.+.+..++.++||||
T Consensus 171 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s 200 (273)
T cd05074 171 --------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWA 200 (273)
T ss_pred --------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHH
Confidence 000022456799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++|+|++ ||... ........+.............+...+++.+||..+|.+||++.++++
T Consensus 201 lG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 201 FGVTMWEIMTRGQTPYAGV-ENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHhhCCCCCCCCC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999987 34332 222333333332222222233456669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-25 Score=227.06 Aligned_cols=202 Identities=14% Similarity=0.182 Sum_probs=141.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++ .+.+ ...+++++|+ .+++|.++|... ....++..++.++.||+.||+|||+.
T Consensus 44 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 44 EEAQPYRSLQHSNLLQCLG-QCTE---VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC---CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 3556788999999999887 4432 2346677777 689999999432 12356778889999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++++|||.+....... +
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~----------------------------------~---------- 155 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED----------------------------------Y---------- 155 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc----------------------------------e----------
Confidence 99999999999999999999999999874321110 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-------CCCCccc
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCASD 254 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~sD 254 (712)
........|+..|+|||++.+. .++.++|
T Consensus 156 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05087 156 --------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESN 191 (269)
T ss_pred --------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCccch
Confidence 0000013467889999998542 3578999
Q ss_pred hHHHHHHHHHhhC----CCCCChhhHHHHHhhccc---CCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||................ ...+... ...+...+++..|+ .+|.+|||+++|+.
T Consensus 192 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 192 VWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 9999999999985 665443332222212111 1111111 22334458999998 68999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=228.96 Aligned_cols=205 Identities=20% Similarity=0.207 Sum_probs=146.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...++.+.|+|++++++ ++.. .....+++++|+ .+++|.+++......+++..++.++.||+.||.|||+.||+|+
T Consensus 56 ei~~l~~l~~~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~ 133 (284)
T cd05038 56 EIEILRTLDHENIVKYKG-VCEK-PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHR 133 (284)
T ss_pred HHHHHHhCCCCChheEEe-eeec-CCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 344688899999999877 4432 234456677776 5899999996555468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+....... ++
T Consensus 134 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--------------- 165 (284)
T cd05038 134 DLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY--------------- 165 (284)
T ss_pred CCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc---------------
Confidence 999999999999999999999885432110 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.. ......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -------------------~~--------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~ 206 (284)
T cd05038 166 -------------------YY--------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF 206 (284)
T ss_pred -------------------ee--------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee
Confidence 00 000012356799999998888999999999999999999
Q ss_pred C---CCCCChhhH-------------HHHH-hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKT-------------RTMS-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |+....... ..+. .+......+..........+++.+||..+|.+|||+.++++
T Consensus 207 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 207 TYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9 333211111 1111 11111111111122234559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=224.87 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=74.2
Q ss_pred CCCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCc
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSC 112 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~N 112 (712)
.+-+.||+|++.|-....+..|+|+|+|+.|.+|..|| +...+.++...++.|++||+.||+|||. .||||-||||+|
T Consensus 139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN 218 (590)
T ss_pred CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence 44456899999777788899999999999999999999 4455669999999999999999999998 599999999999
Q ss_pred eeecCC
Q 005147 113 FVMSSF 118 (712)
Q Consensus 113 Ill~~~ 118 (712)
||+...
T Consensus 219 vLl~~~ 224 (590)
T KOG1290|consen 219 VLLCST 224 (590)
T ss_pred eeeecc
Confidence 999644
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-25 Score=236.14 Aligned_cols=248 Identities=14% Similarity=0.161 Sum_probs=162.0
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++||| ||+.-+.+=||+||+ .|.+ .+.+|.||+| .||++-.+|.+-+ .|.+..++.++..|.+|+++.|..|
T Consensus 677 KAERD--ILAEADn~WVVrLyy-SFQD---kdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG 749 (1034)
T KOG0608|consen 677 KAERD--ILAEADNEWVVRLYY-SFQD---KDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG 749 (1034)
T ss_pred hhhhh--hHhhcCCcceEEEEE-Eecc---CCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45566 899999999999988 4432 3456666666 8999999885544 3899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|||||||+||||+.+|+|||.|||+|.-+-.. ++...++ .+|- .++
T Consensus 750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT---------------------HdskYYq----~gdH--------~Rq 796 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT---------------------HDSKYYQ----EGDH--------HRQ 796 (1034)
T ss_pred ceecccCccceEEccCCceeeeeccccccceec---------------------ccccccc----CCCc--------ccc
Confidence 999999999999999999999999999653211 0100000 0000 000
Q ss_pred ccccccCCCcccccccccccccccccccccccccccccc--CCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
.+ +...+ .+.|.+-.....+.+ ++...+..-.++||+.|+|||++....|+..+|+||.||
T Consensus 797 DS------------mep~~-----e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gv 859 (1034)
T KOG0608|consen 797 DS------------MEPSP-----EWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGV 859 (1034)
T ss_pred cc------------CCCch-----hhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhH
Confidence 00 00000 111111111111111 122233344589999999999999999999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~ 330 (712)
+||||+. ||.........+..+.=. .++. -....+++.++|.++. .++..|. .+++|..||||+....
T Consensus 860 il~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~-~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 860 ILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY-QGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHHHHhhCCCCccCCCCCcceeeeeehhhcccccc-ccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 9999998 776544333222221111 1111 1123345557777644 5667776 4778999999998643
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-25 Score=218.49 Aligned_cols=209 Identities=16% Similarity=0.217 Sum_probs=156.5
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
-+..+||-+|++.. .+ ..+...|++++++.||+|--.+ +.+++++++.++.+...|..||.|||++|||.||||.+
T Consensus 305 e~asn~pflvglhs-cf--qtesrlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkld 380 (593)
T KOG0695|consen 305 EQASNNPFLVGLHS-CF--QTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLD 380 (593)
T ss_pred HhccCCCeEEehhh-hh--cccceEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeecccc
Confidence 34478999888766 44 3344566777777999998777 44566999999999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|+|++..|++|+.|+|+|+.-- +.+|.
T Consensus 381 nvlldaeghikltdygmcke~l---------------------------------~~gd~-------------------- 407 (593)
T KOG0695|consen 381 NVLLDAEGHIKLTDYGMCKEGL---------------------------------GPGDT-------------------- 407 (593)
T ss_pred ceEEccCCceeecccchhhcCC---------------------------------CCCcc--------------------
Confidence 9999999999999999995310 01121
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
....+|||.|.|||+++|..|++++|+|+|||++|||+. |
T Consensus 408 -------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrsp 450 (593)
T KOG0695|consen 408 -------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP 450 (593)
T ss_pred -------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCC
Confidence 012689999999999999999999999999999999998 6
Q ss_pred CCC------ChhhHH-HHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCC------CHHHHhcCcCCCCCcCchHH
Q 005147 269 FST------GEEKTR-TMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEPRDSMEE 334 (712)
Q Consensus 269 f~~------~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp------t~~eiL~hp~~~~~~~~~~e 334 (712)
|.- ..+... .++.+. +++..|. ........+++..|.+||.+|. .+.++..|+||+.....+.+
T Consensus 451 fdivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le 528 (593)
T KOG0695|consen 451 FDIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE 528 (593)
T ss_pred cceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh
Confidence 641 122222 222222 2222221 2234455789999999999986 47889999999976655544
Q ss_pred HH
Q 005147 335 RE 336 (712)
Q Consensus 335 ~~ 336 (712)
.+
T Consensus 529 qk 530 (593)
T KOG0695|consen 529 QK 530 (593)
T ss_pred hc
Confidence 43
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-25 Score=239.26 Aligned_cols=155 Identities=13% Similarity=0.149 Sum_probs=115.7
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+++..++.|+.||+.||+|||+.||+||||||+||+++..+.++++|||+++......
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~---------------------- 293 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS---------------------- 293 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc----------------------
Confidence 5667788999999999999999999999999999999999999999999885321110
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
.+ .......++..|
T Consensus 294 -----------~~-------------------------------------------------------~~~~~~~~~~~y 307 (401)
T cd05107 294 -----------NY-------------------------------------------------------ISKGSTFLPLKW 307 (401)
T ss_pred -----------cc-------------------------------------------------------ccCCCcCCCCce
Confidence 00 000013457889
Q ss_pred cCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 239 ASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 239 ~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
+|||.+.+..++.++|||||||++|||++ ||............+.....++..........+++.+||..+|.+||
T Consensus 308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RP 387 (401)
T cd05107 308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRP 387 (401)
T ss_pred eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCc
Confidence 99999988889999999999999999996 55433322223333333322222222345566999999999999999
Q ss_pred CHHHHhc
Q 005147 315 KMGELLQ 321 (712)
Q Consensus 315 t~~eiL~ 321 (712)
++.+|++
T Consensus 388 s~~ell~ 394 (401)
T cd05107 388 DFSQLVH 394 (401)
T ss_pred CHHHHHH
Confidence 9999987
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=224.82 Aligned_cols=193 Identities=16% Similarity=0.238 Sum_probs=144.8
Q ss_pred ccCCCCCcccccccccccccccCceEEEEee-CCccHHHhh---cCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceecc
Q 005147 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l---~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrD 107 (712)
+.++|||++.+++ .+.. ...+++++|+ .|++|.+++ ......+++..++.++.||+.+|.|||+ .||+|+|
T Consensus 64 ~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~d 139 (269)
T cd08528 64 EQLRHPNIVRYYK-TFLE---NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRD 139 (269)
T ss_pred hcCCCCCeeeEEe-eEcc---CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecC
Confidence 4589999999888 4422 2456777766 688999887 2334458999999999999999999996 7899999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+.......
T Consensus 140 l~~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 168 (269)
T cd08528 140 LTPNNIMLGEDDKVTITDFGLAKQKQPES--------------------------------------------------- 168 (269)
T ss_pred CCHHHEEECCCCcEEEecccceeeccccc---------------------------------------------------
Confidence 99999999999999999999884321110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 169 ----------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~ 208 (269)
T cd08528 169 ----------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208 (269)
T ss_pred ----------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 0001356888999999998889999999999999999998
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||...... .....+.....++... ...+...+++.+||+.||.+||++.|+..
T Consensus 209 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 209 LQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred CCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 55433322 2222333333332222 22345669999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=227.66 Aligned_cols=208 Identities=18% Similarity=0.191 Sum_probs=150.1
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..+ +|||++.+++ .+. ....+++++++ .|++|.+++.... .+++.+++.++.|++.+|+|||+.|++|
T Consensus 54 E~~~l~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~~~H 128 (288)
T cd05583 54 ERQVLEAVRRCPFLVTLHY-AFQ---TDTKLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQLGIIY 128 (288)
T ss_pred HHHHHHhccCCcchhhhhe-eee---cCCEEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 33456666 7999999877 332 22356777777 5889999985443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||+++....... .
T Consensus 129 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~-------------- 161 (288)
T cd05583 129 RDIKLENILLDSEGHVVLTDFGLSKEFLAEEE---------------------------------E-------------- 161 (288)
T ss_pred cCCCHHHeEECCCCCEEEEECccccccccccc---------------------------------c--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+.. ++.++||||||+++|
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 162 ------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTF 199 (288)
T ss_pred ------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHH
Confidence 000135788999999987665 788999999999999
Q ss_pred HhhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~~ 330 (712)
+|++ ||..... ............ ++......+...+++.+||+.+|++||| +.++|+||||+....
T Consensus 200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 200 ELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred HHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 9999 5532211 111111111111 1111222345569999999999999998 567899999987644
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-24 Score=219.32 Aligned_cols=188 Identities=17% Similarity=0.220 Sum_probs=162.3
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~ 561 (712)
-+|-.-|..++|.|+|+.++..+.+.+ ....+..+||+..|+++.| ..||.+..+. .|..-.+||+++
T Consensus 258 ~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf---~~DGSL~~tGGlD~~~RvWDlRt 334 (459)
T KOG0272|consen 258 EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAF---QPDGSLAATGGLDSLGRVWDLRT 334 (459)
T ss_pred hcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEe---cCCCceeeccCccchhheeeccc
Confidence 355555677999999999866655432 3455778899999999999 6777766654 555666799999
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
|+++ +|...|.+|+|+|.|..+||||.|+++||||++.. .......+|.+-|+.|+|.|..+.+|+|++
T Consensus 335 gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r-------~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas 407 (459)
T KOG0272|consen 335 GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR-------SELYTIPAHSNLVSQVKYSPQEGYFLVTAS 407 (459)
T ss_pred CcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc-------ccceecccccchhhheEecccCCeEEEEcc
Confidence 9865 79999999999999999999999999999999762 123456789999999999998899999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
+|++++||..++.++++++.||++.|.|++.+| +++.++|+|.|.++|+|.
T Consensus 408 yD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~-d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 408 YDNTVKIWSTRTWSPLKSLAGHEGKVISLDISP-DSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cCcceeeecCCCcccchhhcCCccceEEEEecc-CCceEEEeccCceeeecc
Confidence 999999999999999999999999999999997 999999999999999995
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=220.27 Aligned_cols=203 Identities=23% Similarity=0.287 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.++|+|++.+++ .+.. ....++++++ .+++|.+++..... ++...+..++.+++.++.|||+.||+|
T Consensus 36 ~e~~~~~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h 110 (244)
T smart00220 36 REISILKKLKHPNIVRLYD-VFED---EDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIH 110 (244)
T ss_pred HHHHHHHhCCCCcHHHHHh-heee---CCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeec
Confidence 3334677789999999887 3322 2456677777 56699999955433 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 111 ~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------- 141 (244)
T smart00220 111 RDLKPENILLDEDGHVKLADFGLARQLDPGG------------------------------------------------- 141 (244)
T ss_pred CCcCHHHeEECCCCcEEEccccceeeecccc-------------------------------------------------
Confidence 9999999999999999999999874322110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|++||.+.+..++.++|||+||+++|+|
T Consensus 142 ------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l 179 (244)
T smart00220 142 ------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYEL 179 (244)
T ss_pred ------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00013568889999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 180 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 180 LTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 98 56543333344444443333322211 23455699999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-25 Score=229.96 Aligned_cols=183 Identities=17% Similarity=0.270 Sum_probs=139.2
Q ss_pred ccCceEEEEeeCCccHHHhhcCCCCC--CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC-CcEEEEecccc
Q 005147 53 AIDPFVHAIEWGDVSLRQWLDKPKRS--VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASC 129 (712)
Q Consensus 53 ~~~~~~l~~e~~g~sL~~~l~~~~~~--l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~-~~vkl~dfg~~ 129 (712)
.-.|+|+|+|....+|++.|++.++. |....++.|+.||+.||..|-..||+|.||||+|||++.. +.+||||||.+
T Consensus 505 hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 44599999999999999999776553 6788999999999999999999999999999999999954 66899999998
Q ss_pred cCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 005147 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (712)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (712)
...+..++.
T Consensus 585 ~~~~eneit----------------------------------------------------------------------- 593 (752)
T KOG0670|consen 585 SFASENEIT----------------------------------------------------------------------- 593 (752)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 554333111
Q ss_pred ccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhh--HHHHHhhcc
Q 005147 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRH 284 (712)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~--~~~~~~~~~ 284 (712)
.++-+..|.|||++.|.+|++..|+||+||+||||+| -|++..+. ...+..+..
T Consensus 594 ---------------------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 594 ---------------------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred ---------------------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 1455778999999999999999999999999999999 34433221 112221110
Q ss_pred ---------cC--------------------------------CC---------------chhhhcCchhHHHHHHcCCC
Q 005147 285 ---------RV--------------------------------LP---------------PQLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 285 ---------~~--------------------------------~~---------------~~~~~~~~~~~~li~~~L~~ 308 (712)
+. -| ..-........+|+.+||..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 00 01 00001111223899999999
Q ss_pred CCCCCCCHHHHhcCcCCCC
Q 005147 309 EPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|.|+.++|+||||+.
T Consensus 733 dP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITVNQALKHPFITE 751 (752)
T ss_pred ChhhcCCHHHHhcCCcccC
Confidence 9999999999999999985
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=210.30 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=121.2
Q ss_pred ccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCccccccccc
Q 005147 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 145 (712)
Q Consensus 66 ~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~ 145 (712)
|+|.+++...+..+++.+++.|++||+.||.|||++| ||+||+++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765666999999999999999999999999 999999999999998 8877322100
Q ss_pred ccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCC
Q 005147 146 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 225 (712)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 225 (712)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-----hhhhcCc-
Q 005147 226 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 296 (712)
Q Consensus 226 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~- 296 (712)
...|++.|||||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999998 5543332222222222211111 1111122
Q ss_pred --hhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 297 --KEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 297 --~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
...+++.+||..+|.+||++.++++|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 466999999999999999999999999865
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=218.44 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=152.0
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
|+..+.|-.+.-++..+ ...+.+|.|||| .||+|--.|++-++ +.+..+..++..|+-||-+||++|||.||||.
T Consensus 403 LAL~~kppFL~qlHScF---QTmDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKL 478 (683)
T KOG0696|consen 403 LALPGKPPFLVQLHSCF---QTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKL 478 (683)
T ss_pred eecCCCCchHHHHHHHh---hhhhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeeeccc
Confidence 44444444333333233 345567777777 69999888866554 99999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+|||++..|+|||+|||+++.--.+ +
T Consensus 479 DNvmLd~eGHiKi~DFGmcKEni~~----~-------------------------------------------------- 504 (683)
T KOG0696|consen 479 DNVMLDSEGHIKIADFGMCKENIFD----G-------------------------------------------------- 504 (683)
T ss_pred cceEeccCCceEeeecccccccccC----C--------------------------------------------------
Confidence 9999999999999999999531100 0
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
.+....+|||-|+|||++...+|+.++|+||+||+||||+.
T Consensus 505 ------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQp 548 (683)
T KOG0696|consen 505 ------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 548 (683)
T ss_pred ------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCC
Confidence 01112789999999999999999999999999999999998
Q ss_pred CCCCChhhHHHHHhhc-cc-CCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 268 PFSTGEEKTRTMSSLR-HR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 268 pf~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
||.+.++. .....+. +. .+|..+ +.++.+++..+|...|.+|.. -.+|-.||||+....
T Consensus 549 PFdGeDE~-elF~aI~ehnvsyPKsl---SkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 549 PFDGEDED-ELFQAIMEHNVSYPKSL---SKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred CCCCCCHH-HHHHHHHHccCcCcccc---cHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 77766554 4444443 32 233322 234448999999999999974 467899999997754
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=210.58 Aligned_cols=171 Identities=18% Similarity=0.329 Sum_probs=145.5
Q ss_pred CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-------eecCCCCeeEEEEcCC-CCEEEEEe
Q 005147 516 RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-------LLNSSNLVCSLSFDRD-GELFAAAG 587 (712)
Q Consensus 516 ~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-------~~~h~~~V~~i~f~~~-~~~lat~~ 587 (712)
....|.+++.||.++||+++| +++..|.+...+.......|...+|. +.+|+..|.+++|+|. ...||+||
T Consensus 199 s~~~Pl~t~~ghk~EGy~LdW-Sp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS 277 (440)
T KOG0302|consen 199 SEFRPLFTFNGHKGEGYGLDW-SPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS 277 (440)
T ss_pred cccCceEEecccCccceeeec-ccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeee
Confidence 446799999999999999999 88888865555555555557666654 5589999999999994 56999999
Q ss_pred CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC---CcEEEEeccCCCcEE
Q 005147 588 VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR---SQVLTEMREHERRVW 664 (712)
Q Consensus 588 ~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~---~~~~~~~~~H~~~v~ 664 (712)
.|++|+|||+|.... ...+...+|.+.|+.|+||-. -.+||+|+.||+++|||+|+ ++++.+|+.|..+|+
T Consensus 278 ~DgsIrIWDiRs~~~-----~~~~~~kAh~sDVNVISWnr~-~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pIt 351 (440)
T KOG0302|consen 278 CDGSIRIWDIRSGPK-----KAAVSTKAHNSDVNVISWNRR-EPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPIT 351 (440)
T ss_pred cCceEEEEEecCCCc-----cceeEeeccCCceeeEEccCC-cceeeecCCCceEEEEEhhhccCCCcceeEEeccCCee
Confidence 999999999987422 234556899999999999985 55999999999999999985 578999999999999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
||.|+|.+...|+.+|.|..|.|||+...
T Consensus 352 sieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 352 SIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred EEEeccccCceEEeccCCCcEEEEEeecc
Confidence 99999999999999999999999998653
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=216.62 Aligned_cols=171 Identities=19% Similarity=0.337 Sum_probs=150.9
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----------eecCCCCeeEEEEcC-CCCEEE
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----------LLNSSNLVCSLSFDR-DGELFA 584 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~-~~~~la 584 (712)
.+.|.++|+||.++|++++| +....|.+...+.+....+||+.... +.+|.+.|.+++|++ +..+|+
T Consensus 166 ~~~Pdl~L~gH~~eg~glsW-n~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~ 244 (422)
T KOG0264|consen 166 ECRPDLRLKGHEKEGYGLSW-NRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFG 244 (422)
T ss_pred cCCCceEEEeeccccccccc-ccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhe
Confidence 57899999999999999999 88899988777777777779997532 236999999999999 667999
Q ss_pred EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcE
Q 005147 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRV 663 (712)
Q Consensus 585 t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v 663 (712)
++|.|+++.|||+|+. .........+|.++|+|++|+|+++.+|||||.|++|.|||+|+. +++.++.+|.+.|
T Consensus 245 sv~dd~~L~iwD~R~~-----~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev 319 (422)
T KOG0264|consen 245 SVGDDGKLMIWDTRSN-----TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEV 319 (422)
T ss_pred eecCCCeEEEEEcCCC-----CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcce
Confidence 9999999999999862 122344567899999999999999999999999999999999986 6899999999999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.+|.|+|....+|||++.|+++.|||+..-
T Consensus 320 ~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 320 FQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred EEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 999999999999999999999999999753
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=231.04 Aligned_cols=167 Identities=19% Similarity=0.275 Sum_probs=144.5
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
-+|.||+++||+..| +| +.-..+.+..+..++ |.+.+..+. ||..+|+++.|+|-|-+|||||.|++.++|.
T Consensus 445 ~~L~GH~GPVyg~sF-sP--d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs 521 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSF-SP--DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS 521 (707)
T ss_pred EEeecCCCceeeeee-cc--cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence 358899999999999 33 333334444444444 888876644 8999999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
... ........+|-+.|.|+.||| +.+|+||||.|.+|++||+.+|..++.|.||.++|.+|+||| +|.+|
T Consensus 522 ~d~-------~~PlRifaghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp-~Gr~L 592 (707)
T KOG0263|consen 522 TDH-------NKPLRIFAGHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSP-CGRYL 592 (707)
T ss_pred ccc-------CCchhhhcccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcC-CCceE
Confidence 864 233456778999999999999 699999999999999999999999999999999999999998 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|||+.|+.|++||+.++..+.++.
T Consensus 593 aSg~ed~~I~iWDl~~~~~v~~l~ 616 (707)
T KOG0263|consen 593 ASGDEDGLIKIWDLANGSLVKQLK 616 (707)
T ss_pred eecccCCcEEEEEcCCCcchhhhh
Confidence 999999999999999988886654
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-24 Score=229.51 Aligned_cols=200 Identities=19% Similarity=0.181 Sum_probs=163.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++...+||||++++| +|. ..++.|+||+ .-|.|++||+.+...++......++.||+.||.|||+..+||
T Consensus 440 qEa~iMrnfdHphIikLIG-v~~----e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVH 514 (974)
T KOG4257|consen 440 QEASIMRNFDHPHIIKLIG-VCV----EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVH 514 (974)
T ss_pred HHHHHHHhCCCcchhheee-eee----ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhh
Confidence 5557899999999999998 763 3467777777 588999999777777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|||+.+...||++|||+++-...+...
T Consensus 515 RDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY----------------------------------------------- 547 (974)
T KOG4257|consen 515 RDIAARNILVSSPQCVKLADFGLSRYLEDDAYY----------------------------------------------- 547 (974)
T ss_pred hhhhhhheeecCcceeeecccchhhhccccchh-----------------------------------------------
Confidence 999999999999999999999998654332110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+ ....-..-|||||.++-..++.+||||-|||++||+
T Consensus 548 --------ka----------------------------------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 548 --------KA----------------------------------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred --------hc----------------------------------cccccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 00 000113458999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|. ||..-.+. .++-.+.++..+|..+...|....++.+||.++|.+||++.+|..
T Consensus 586 l~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 586 LSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 97 88765543 445556667777777777788889999999999999999988754
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-24 Score=235.42 Aligned_cols=208 Identities=16% Similarity=0.218 Sum_probs=157.1
Q ss_pred eeccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+....+|||++.+|+.++.. ....+.+++|||+| |||..|++++ .+..+.+..+..|++.++.|+.+||...++|||
T Consensus 69 l~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD 148 (953)
T KOG0587|consen 69 LKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD 148 (953)
T ss_pred HHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence 34457999999988855543 33456788888885 8999998833 366699999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
||-.|||++.++.||++|||++.+..+-.
T Consensus 149 ikG~NiLLT~e~~VKLvDFGvSaQldsT~--------------------------------------------------- 177 (953)
T KOG0587|consen 149 IKGQNVLLTENAEVKLVDFGVSAQLDSTV--------------------------------------------------- 177 (953)
T ss_pred ccCceEEEeccCcEEEeeeeeeeeeeccc---------------------------------------------------
Confidence 99999999999999999999884431110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----CCCCccchHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLL 262 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvll 262 (712)
.+....+|||.|||||++... .|+..+|+||||++.
T Consensus 178 ---------------------------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa 218 (953)
T KOG0587|consen 178 ---------------------------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA 218 (953)
T ss_pred ---------------------------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence 011226899999999999543 378899999999999
Q ss_pred HHhhCCCCC--ChhhHHHHHhhcccCCCchh--hhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFCPFST--GEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~pf~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.||--|-++ ......++-.+-.. .|+.+ +..|.+.. +||..||..|-.+||++.++|+|||++...
T Consensus 219 IEladG~PPl~DmHPmraLF~IpRN-PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 219 IEMAEGAPPLCDMHPMRALFLIPRN-PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred ehhcCCCCCccCcchhhhhccCCCC-CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 999983222 22222333332222 23332 33444444 999999999999999999999999999443
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-25 Score=214.67 Aligned_cols=232 Identities=20% Similarity=0.225 Sum_probs=164.0
Q ss_pred cccccccccCCCCCcce----eeeccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCC
Q 005147 7 RGERFGVRGDDSNDFEL----RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~~~----r~~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~ 80 (712)
.|+|++.++-..-...+ |-.++...|.-..|.|++..++ +..... ....+|+++|+...+|...|-.++. ++
T Consensus 77 dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLD-ILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~-Ls 154 (449)
T KOG0664|consen 77 SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLD-ILQPANPSFFQELYVLTELMQSDLHKIIVSPQA-LT 154 (449)
T ss_pred CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHH-hcCCCCchHHHHHHHHHHHHHhhhhheeccCCC-CC
Confidence 35555555444322221 3446777888899999988887 332221 2236788889988899998866654 99
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
...++-+++||++||.|||+.||.||||||.|.|++++..+||||||+++....++..
T Consensus 155 ~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~---------------------- 212 (449)
T KOG0664|consen 155 PDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL---------------------- 212 (449)
T ss_pred cchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh----------------------
Confidence 9999999999999999999999999999999999999999999999999643222100
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
.| +.-+-|.+|+|
T Consensus 213 -----------------------------------------------------------------hM--TqEVVTQYYRA 225 (449)
T KOG0664|consen 213 -----------------------------------------------------------------NM--THEVVTQYYRA 225 (449)
T ss_pred -----------------------------------------------------------------hh--HHHHHHHHhcc
Confidence 00 11345889999
Q ss_pred cccccCCC-CCCccchHHHHHHHHHhhC---CCCCC--------------hhhHHHHHh---------hcccCCCchhhh
Q 005147 241 PEELAGAP-VSCASDIYRLGVLLFELFC---PFSTG--------------EEKTRTMSS---------LRHRVLPPQLLL 293 (712)
Q Consensus 241 PE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~~~--------------~~~~~~~~~---------~~~~~~~~~~~~ 293 (712)
||++.|.. |+.+.||||+||++.||+. -|... ....+.|.. ++....++.+..
T Consensus 226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v 305 (449)
T KOG0664|consen 226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR 305 (449)
T ss_pred HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc
Confidence 99999887 9999999999999999998 22211 111122221 122222222211
Q ss_pred c---------CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 K---------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 ~---------~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
. ......++..+|..||.+|.+.++++.|++..+.+
T Consensus 306 LYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 306 LYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred eeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 1 11223788999999999999999999999876643
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-24 Score=217.55 Aligned_cols=214 Identities=17% Similarity=0.241 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--Cc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--GI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~--gI 103 (712)
|+.-|-+.++||.||++|+ ++ ....+.||-|.||+ |.+|.-||+.. +.+++.+++.|+.||+.||.||... .|
T Consensus 516 REyrIHKeLDHpRIVKlYD-yf--slDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYD-YF--SLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeee-ee--eeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 5666778899999999999 44 44567899988885 88888888544 4589999999999999999999975 79
Q ss_pred eeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 104 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 104 vHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||-||||.|||+. ..|.+||.|||+++....++.. .+.|.-
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGme------ 635 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGME------ 635 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------ccccee------
Confidence 9999999999996 4578999999999765443211 000000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--C--CCCccchH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--P--VSCASDIY 256 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~--~~~~sDIw 256 (712)
+ .....||.||.+||.+.-+ + .+.++|||
T Consensus 636 ---------------------------L--------------------TSQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 636 ---------------------------L--------------------TSQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred ---------------------------e--------------------ecccCceeeecCcceeecCCCCCccccceeeE
Confidence 0 0014689999999988644 2 79999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHh-----hcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSS-----LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+||++|..+. ||.........+.. .....+|+. +...++..+||++||.+.-++|..+.++..||||...
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999988 77654433322221 122334433 2244666799999999999999999999999999763
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=208.02 Aligned_cols=174 Identities=17% Similarity=0.281 Sum_probs=139.6
Q ss_pred ccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce
Q 005147 485 RCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL 564 (712)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~ 564 (712)
|+...++||...|-|+.|||+|..+ +++..|.++.+|+.++-.- ..++
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l---------------------------~tGsGD~TvR~WD~~TeTp-----~~t~ 153 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRL---------------------------VTGSGDTTVRLWDLDTETP-----LFTC 153 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceE---------------------------EecCCCceEEeeccCCCCc-----ceee
Confidence 4445566676666677777766666 4555565555554443222 1335
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC----CCEEEEEeCCC
Q 005147 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI----KSQIASSNFEG 640 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----~~~lasgs~Dg 640 (712)
.+|.++|.||+|+|||..||+|+.||.|++||..++.+.. ....+|+..|++++|.|.. ...||+++.||
T Consensus 154 KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g------~~l~gH~K~It~Lawep~hl~p~~r~las~skDg 227 (480)
T KOG0271|consen 154 KGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG------RALRGHKKWITALAWEPLHLVPPCRRLASSSKDG 227 (480)
T ss_pred cCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc------ccccCcccceeEEeecccccCCCccceecccCCC
Confidence 5899999999999999999999999999999998754322 3456899999999998853 45899999999
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.|+|||+..++++..+.+|+.+|+||.|- ...+++|||.|++|++|+...|.+...
T Consensus 228 ~vrIWd~~~~~~~~~lsgHT~~VTCvrwG--G~gliySgS~DrtIkvw~a~dG~~~r~ 283 (480)
T KOG0271|consen 228 SVRIWDTKLGTCVRTLSGHTASVTCVRWG--GEGLIYSGSQDRTIKVWRALDGKLCRE 283 (480)
T ss_pred CEEEEEccCceEEEEeccCccceEEEEEc--CCceEEecCCCceEEEEEccchhHHHh
Confidence 99999999999999999999999999997 468999999999999999999877643
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=224.32 Aligned_cols=211 Identities=19% Similarity=0.280 Sum_probs=169.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-CC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-RS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.-||..-|....|+||-+.+ +...| .+ ....+..+||..+|..+.| +|+ .-..+.++.|....+|...
T Consensus 447 L~GH~GPVyg~sFsPd~rfL-lScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F-~P~-GyYFatas~D~tArLWs~d 523 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFL-LSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQF-APR-GYYFATASHDQTARLWSTD 523 (707)
T ss_pred eecCCCceeeeeecccccce-eeccCCcceeeeecccceeEEEecCCCcceeeEEe-cCC-ceEEEecCCCceeeeeecc
Confidence 66888999999999999988 33333 21 2345778899999988887 444 2222333344444457666
Q ss_pred CCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+.. +.+|.+-|.|+.|+|+.+|+||||.|++|++||+.++ .......+|+++|++|+|+| +|.+||+|
T Consensus 524 ~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G-------~~VRiF~GH~~~V~al~~Sp-~Gr~LaSg 595 (707)
T KOG0263|consen 524 HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG-------NSVRIFTGHKGPVTALAFSP-CGRYLASG 595 (707)
T ss_pred cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCC-------cEEEEecCCCCceEEEEEcC-CCceEeec
Confidence 533 4589999999999999999999999999999999764 33455679999999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE-------------------E
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL-------------------L 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v-------------------~ 697 (712)
+.||.|.|||+.++..+.++.+|++.|.++.|++ +|.+||+||.|++|++||+..-... .
T Consensus 596 ~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
T KOG0263|consen 596 DEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNAS 674 (707)
T ss_pred ccCCcEEEEEcCCCcchhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCC
Confidence 9999999999999999999999999999999996 9999999999999999998754333 1
Q ss_pred EEeceeeccCceeeC
Q 005147 698 HLVDVSFETKRTTVI 712 (712)
Q Consensus 698 ~~~~~~~~~~~~~~~ 712 (712)
.++.+.+.|++|||+
T Consensus 675 ~~llgs~~tK~tpv~ 689 (707)
T KOG0263|consen 675 SLLLGSFYTKNTPVV 689 (707)
T ss_pred cceeeeeeecCceEE
Confidence 234566778888774
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=196.54 Aligned_cols=172 Identities=22% Similarity=0.298 Sum_probs=144.1
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
+|.-.++||+..+.++.. ..||...+...-++.++ ||+.+|+ +.+|...|.+++|++|...++||+.|++|+
T Consensus 54 ~~~r~~~GHsH~v~dv~~---s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTik 130 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVL---SSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIK 130 (315)
T ss_pred ceeeeeeccceEecceEE---ccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceee
Confidence 466788899988877776 56666666554455544 9998764 669999999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
+|++-.. ..+...+..++..|+||+|+|.. ..+|+++|+|++|++||+++-+...+|.+|++.++.+.+|| |
T Consensus 131 lwnt~g~------ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSp-D 203 (315)
T KOG0279|consen 131 LWNTLGV------CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSP-D 203 (315)
T ss_pred eeeeccc------EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECC-C
Confidence 9998541 12223333447899999999954 56999999999999999999999999999999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++++||+.||.+.+||++.++.++.+-
T Consensus 204 GslcasGgkdg~~~LwdL~~~k~lysl~ 231 (315)
T KOG0279|consen 204 GSLCASGGKDGEAMLWDLNEGKNLYSLE 231 (315)
T ss_pred CCEEecCCCCceEEEEEccCCceeEecc
Confidence 9999999999999999999999976553
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=222.62 Aligned_cols=200 Identities=21% Similarity=0.211 Sum_probs=161.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+.++++.+.|||+|+|++ +|..+ -+|||++|| +.|+|.+||+..++ .++....+.++.||..|++||..+++||
T Consensus 313 EAAvMKeikHpNLVqLLG-VCT~E---pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIH 388 (1157)
T KOG4278|consen 313 EAAVMKEIKHPNLVQLLG-VCTHE---PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIH 388 (1157)
T ss_pred HHHHHHhhcCccHHHHhh-hhccC---CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 445789999999999999 88544 467888887 69999999966544 3677788889999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|.|+..++.||++|||+++.+..+ --.|.+
T Consensus 389 RDLAARNCLVgEnhiVKvADFGLsRlMtgD-----------------------------------TYTAHA--------- 424 (1157)
T KOG4278|consen 389 RDLAARNCLVGENHIVKVADFGLSRLMTGD-----------------------------------TYTAHA--------- 424 (1157)
T ss_pred hhhhhhhccccccceEEeeccchhhhhcCC-----------------------------------ceeccc---------
Confidence 999999999999999999999998543222 100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.-.| ..-|.|||-+....++.++|||+|||||||+
T Consensus 425 ------------------------------------GAKF---------PIKWTAPEsLAyNtFSiKSDVWAFGVLLWEI 459 (1157)
T KOG4278|consen 425 ------------------------------------GAKF---------PIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 459 (1157)
T ss_pred ------------------------------------CccC---------cccccCcccccccccccchhhHHHHHHHHHH
Confidence 1112 2348999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.| ||++ -+...++..+.++..........|....|++.||+++|.+||++.||-+
T Consensus 460 ATYGMsPYPG-idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 460 ATYGMSPYPG-IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HhcCCCCCCC-ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 98 7754 4455677777777666666677788889999999999999999999855
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-24 Score=198.63 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=130.4
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc-Ccee
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvH 105 (712)
+.....+-|-+|.+|+ .+. ....+.+.||....||..+.+ +.+..+++...-+|+..++.||.|||++ .|||
T Consensus 97 i~~r~~~CPf~V~FyG-a~~---regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIH 172 (282)
T KOG0984|consen 97 IIMRTVDCPFTVHFYG-ALF---REGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIH 172 (282)
T ss_pred hhccCCCCCeEEEeeh-hhh---ccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhh
Confidence 3456678899999888 442 334578899999999988662 3455699999999999999999999996 9999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||+||+||||+..|+||+||||.+......
T Consensus 173 RDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-------------------------------------------------- 202 (282)
T KOG0984|consen 173 RDVKPSNILINYDGQVKICDFGISGYLVDS-------------------------------------------------- 202 (282)
T ss_pred ccCCcceEEEccCCcEEEcccccceeehhh--------------------------------------------------
Confidence 999999999999999999999988322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC----CCCCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvl 261 (712)
-.+. ...|...|||||.+.. ..|+.+|||||||++
T Consensus 203 -------------------iAkt----------------------~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 203 -------------------IAKT----------------------MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred -------------------hHHH----------------------HhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 0011 1357889999998853 359999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLP 288 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~ 288 (712)
++||.+ ||..+...+..++.+.....|
T Consensus 242 miElA~lr~PY~~w~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 242 MIEMAILRFPYESWGTPFQQLKQVVEEPSP 271 (282)
T ss_pred hhhhhhccccccccCCHHHHHHHHhcCCCC
Confidence 999998 898888888888877765544
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=202.48 Aligned_cols=206 Identities=19% Similarity=0.257 Sum_probs=160.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC---------CCCCceeeccCCCccceecccCCC----CCCcEEEEEcCCcEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER---------SSINNLGSKEGYSEGRRSGWINPF----LEGLCKYLSFSKLRVK 556 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~ 556 (712)
..+|+.-|.|++|||||..++...-+. ...-.-.|+||...+.+++| .|. ....++..+.+....+
T Consensus 153 ~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Law-ep~hl~p~~r~las~skDg~vrI 231 (480)
T KOG0271|consen 153 CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAW-EPLHLVPPCRRLASSSKDGSVRI 231 (480)
T ss_pred ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEee-cccccCCCccceecccCCCCEEE
Confidence 347888999999999999876654332 22222478999999999999 433 2234445555555666
Q ss_pred EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcc-----c----------------------cCc
Q 005147 557 ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII-----N----------------------ENR 605 (712)
Q Consensus 557 ~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~-----~----------------------~~~ 605 (712)
||+..+.++ +|+.+|+|+.|--+ .+|++|+.|++||+|+...+. . ++.
T Consensus 232 Wd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t 310 (480)
T KOG0271|consen 232 WDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHT 310 (480)
T ss_pred EEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccc
Confidence 999887654 89999999999643 499999999999999986510 0 000
Q ss_pred c--------------------------------------------cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 606 D--------------------------------------------IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 606 ~--------------------------------------------~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
. .++|+ ...+|..-|+.|.|+| ++.++||+|+|.
T Consensus 311 ~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDk 389 (480)
T KOG0271|consen 311 GRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASFDK 389 (480)
T ss_pred cccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC-CccEEEEeeccc
Confidence 0 00111 2347888999999999 699999999999
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.|+|||.++|+-+.+|.+|-+.|+.|+|+ .|..+|+|||.|.++++||+++.+....+
T Consensus 390 SVkLW~g~tGk~lasfRGHv~~VYqvaws-aDsRLlVS~SkDsTLKvw~V~tkKl~~DL 447 (480)
T KOG0271|consen 390 SVKLWDGRTGKFLASFRGHVAAVYQVAWS-ADSRLLVSGSKDSTLKVWDVRTKKLKQDL 447 (480)
T ss_pred ceeeeeCCCcchhhhhhhccceeEEEEec-cCccEEEEcCCCceEEEEEeeeeeecccC
Confidence 99999999999999999999999999999 59999999999999999999986655443
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-23 Score=225.91 Aligned_cols=157 Identities=19% Similarity=0.231 Sum_probs=125.7
Q ss_pred eccceeeccCCCCCccccccccccccc----ccCceEEEEeeCCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
.++.-+|+.++|+|||++++ +-+... ...++.+++++.||+|+..|+++ ...|++.+.+.++..++.||.|||
T Consensus 59 ~~EieilkKLnh~NIVk~f~-iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 59 CREIEILKKLNHPNIVKLFD-IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred HHHHHHHHHcCchhhhhhcc-cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 36777899999999999988 443333 33456666666799999999654 345999999999999999999999
Q ss_pred hcCceeccCCCCceeec--CCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMS--SFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~--~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.+|||||||||.||++- .+|+ .|++|||.++.....+.
T Consensus 138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------------------------------------- 179 (732)
T KOG4250|consen 138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------------------------------------- 179 (732)
T ss_pred HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe--------------------------------------
Confidence 99999999999999996 3243 59999999966433210
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sD 254 (712)
-.+.+||..|.+||.+.. ..|+..+|
T Consensus 180 -----------------------------------------------------~~S~vGT~~YLhPel~E~q~~y~~tVD 206 (732)
T KOG4250|consen 180 -----------------------------------------------------FTSLVGTEEYLHPELYERQKKYTATVD 206 (732)
T ss_pred -----------------------------------------------------eeeecCchhhcChHHHhhccCcCceee
Confidence 022689999999999984 77999999
Q ss_pred hHHHHHHHHHhhC---CCCCChh
Q 005147 255 IYRLGVLLFELFC---PFSTGEE 274 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~ 274 (712)
.||+||++|++.| ||.+...
T Consensus 207 LWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 207 LWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred hhhhhhHHHHHhccCCCCCcCCC
Confidence 9999999999999 6655443
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-23 Score=222.35 Aligned_cols=202 Identities=18% Similarity=0.182 Sum_probs=149.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+++.||||+.+++ +|. -.+++|+++|| ..|+|.+||.+... .+.-.....|+.||+.|++||.+.++|
T Consensus 584 kEIkiLsqLkhPNIveLvG-VC~---~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfV 659 (807)
T KOG1094|consen 584 KEIKILSRLKHPNIVELLG-VCV---QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFV 659 (807)
T ss_pred HHHHHHhccCCCCeeEEEe-eee---cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchh
Confidence 5566899999999999999 763 34578888888 58999999954432 235567778999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||.+.|+|++.++++||+|||+++..-+. |+
T Consensus 660 Hrd~a~rNcLv~~e~~iKiadfgmsR~lysg----------------------------------~y------------- 692 (807)
T KOG1094|consen 660 HRDLATRNCLVDGEFTIKIADFGMSRNLYSG----------------------------------DY------------- 692 (807)
T ss_pred hccccccceeecCcccEEecCcccccccccC----------------------------------Cc-------------
Confidence 9999999999999999999999998642111 11
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.++ +...+-...|||||.+.-++++++||+|++|+++||
T Consensus 693 ---------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE 731 (807)
T KOG1094|consen 693 ---------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE 731 (807)
T ss_pred ---------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHH
Confidence 000 000233568999999999999999999999999999
Q ss_pred hhC-----CCCCChhhHHHHHhhc----c---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC-----PFSTGEEKTRTMSSLR----H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~-----pf~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++ ||....+. ....+.. + ..++....-......+++.+|+..+.++||+++++..
T Consensus 732 ~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 732 VFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred HHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 987 77654332 2222211 1 1122222222334459999999999999999999844
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=221.70 Aligned_cols=183 Identities=20% Similarity=0.244 Sum_probs=124.7
Q ss_pred ceEEEEee-CCccHHHhhcCCC-----------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 56 PFVHAIEW-GDVSLRQWLDKPK-----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 56 ~~~l~~e~-~g~sL~~~l~~~~-----------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
..+++++| .+++|.++|.... ..+++..++.|+.||+.+|.|||++||+||||||+
T Consensus 259 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~ 338 (507)
T PLN03224 259 SQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPE 338 (507)
T ss_pred ceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchH
Confidence 45677777 6899999884321 12356678899999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||+++.++.++++|||++........ +
T Consensus 339 NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~-------------------- 365 (507)
T PLN03224 339 NLLVTVDGQVKIIDFGAAVDMCTGIN---------------------------------F-------------------- 365 (507)
T ss_pred hEEECCCCcEEEEeCcCccccccCCc---------------------------------c--------------------
Confidence 99999999999999998843211100 0
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--------------------CC-
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--------------------VS- 250 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--------------------~~- 250 (712)
......+++.|+|||++.... |+
T Consensus 366 ------------------------------------~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~ 409 (507)
T PLN03224 366 ------------------------------------NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGR 409 (507)
T ss_pred ------------------------------------CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCC
Confidence 000023478999999885432 11
Q ss_pred -CccchHHHHHHHHHhhCCCC-CChh------hHH-------HHHhhcccCCC-chhhhcCchhHHHHHHcCCCCC---C
Q 005147 251 -CASDIYRLGVLLFELFCPFS-TGEE------KTR-------TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---S 311 (712)
Q Consensus 251 -~~sDIwSlGvll~eLl~pf~-~~~~------~~~-------~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP---~ 311 (712)
.+.||||+||++|+|++|.. +... ... .+.......+. +.+....+...+|+.+||..+| .
T Consensus 410 ~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~ 489 (507)
T PLN03224 410 PDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANR 489 (507)
T ss_pred CCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcc
Confidence 24799999999999998432 1110 000 00111111111 1122233455599999999866 6
Q ss_pred CCCCHHHHhcCcCCCC
Q 005147 312 GRPKMGELLQSEFLNE 327 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~ 327 (712)
+|+|+.|+|+||||..
T Consensus 490 ~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 490 GRLSVGQALSHRFFLP 505 (507)
T ss_pred cCCCHHHHhCCCCcCC
Confidence 8999999999999975
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-23 Score=206.24 Aligned_cols=188 Identities=20% Similarity=0.250 Sum_probs=157.3
Q ss_pred ccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--
Q 005147 497 VRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL-- 565 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~-- 565 (712)
|..+.|.|+|+++.+..... .++..+.+..|.++|.+..| +.++.-.+.....+.++ |+..-....
T Consensus 99 V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~w---s~~g~wmiSgD~gG~iKyWqpnmnnVk~~ 175 (464)
T KOG0284|consen 99 VNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKW---SHNGTWMISGDKGGMIKYWQPNMNNVKII 175 (464)
T ss_pred eeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEE---ccCCCEEEEcCCCceEEecccchhhhHHh
Confidence 56788999999883333222 34566788899999999999 67777777777777777 776543322
Q ss_pred --cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 566 --NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 566 --~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
.|...|.+++|+|....|+||+.|++|+|||+... +......+|.-.|.||+||| .+.+||+||.|..|+
T Consensus 176 ~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~-------kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 176 QAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP-------KEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVK 247 (464)
T ss_pred hHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC-------chhheeccCCCCcceeccCC-ccceeEEccCCceeE
Confidence 35699999999999999999999999999999652 22334578999999999999 599999999999999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+||.+++.|+.++.+|...|..+.|+| ++++|+|+|.|..++++|+++-+.+
T Consensus 248 lWDprSg~cl~tlh~HKntVl~~~f~~-n~N~Llt~skD~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 248 LWDPRSGSCLATLHGHKNTVLAVKFNP-NGNWLLTGSKDQSCKVFDIRTMKEL 299 (464)
T ss_pred eecCCCcchhhhhhhccceEEEEEEcC-CCCeeEEccCCceEEEEehhHhHHH
Confidence 999999999999999999999999998 8899999999999999999965544
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-23 Score=227.19 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=163.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..|+.+.+||||+.|.+ +- ....+++|+.|| ..|+|..||+++...++..+...+++.|+.|+.||-+.|+||
T Consensus 679 ~EAsIMGQFdHPNIIrLEG-VV---Tks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVH 754 (996)
T KOG0196|consen 679 SEASIMGQFDHPNIIRLEG-VV---TKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVH 754 (996)
T ss_pred hhhhhcccCCCCcEEEEEE-EE---ecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchh
Confidence 5667899999999999888 43 344678888888 699999999888777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|||++.+-..|+.|||+++....+. +
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~-~----------------------------------------------- 786 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP-E----------------------------------------------- 786 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCC-C-----------------------------------------------
Confidence 9999999999999999999999996442221 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
..++ ..... -...|.|||.+.-.+++.+|||||+|++|||.
T Consensus 787 -----~~yt-------------------------t~GGK---------IPiRWTAPEAIa~RKFTsASDVWSyGIVmWEV 827 (996)
T KOG0196|consen 787 -----AAYT-------------------------TLGGK---------IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 827 (996)
T ss_pred -----cccc-------------------------ccCCc---------cceeecChhHhhhcccCchhhccccceEEEEe
Confidence 0000 00000 13579999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||....+. .+++.+.++..-|...........|++.||++|-..||++.+|+.
T Consensus 828 mSyGERPYWdmSNQ-dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 828 MSYGERPYWDMSNQ-DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred cccCCCcccccchH-HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 98 88766655 566666666554444455555669999999999999999999977
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-22 Score=191.10 Aligned_cols=192 Identities=21% Similarity=0.257 Sum_probs=162.9
Q ss_pred CCCCCC-CccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC----ceecCCCCeeEEEEcC
Q 005147 504 SDGRTS-KPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG----DLLNSSNLVCSLSFDR 578 (712)
Q Consensus 504 ~~g~~~-~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~----~~~~h~~~V~~i~f~~ 578 (712)
+.|.|+ .++.......|+..+++|..+|++++| +......+...+++....+|+..-+ ++.||.+-|....|+|
T Consensus 79 a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdw-n~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp 157 (311)
T KOG0277|consen 79 ASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDW-NTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSP 157 (311)
T ss_pred EecCceEEEeccCCCCcchhHHHhhhhheEEecc-ccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCC
Confidence 456665 566776777899999999999999999 6655555555678877777887643 3558999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEe
Q 005147 579 -DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEM 656 (712)
Q Consensus 579 -~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~ 656 (712)
.+++|+++|.|+++++||++.. ..+.....|...+.|+.|+.++.+.++||+.|+.|++||+|.- .++..+
T Consensus 158 ~~~nlfas~Sgd~~l~lwdvr~~-------gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL 230 (311)
T KOG0277|consen 158 HIPNLFASASGDGTLRLWDVRSP-------GKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL 230 (311)
T ss_pred CCCCeEEEccCCceEEEEEecCC-------CceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee
Confidence 6789999999999999999752 2334467889999999999999999999999999999999975 689999
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 657 ~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.+|+-.|+.|+|||....+|||+|.|=+++|||...+......++.|
T Consensus 231 ~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~H 277 (311)
T KOG0277|consen 231 NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHH 277 (311)
T ss_pred cCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhcc
Confidence 99999999999999889999999999999999998777766666555
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-22 Score=245.88 Aligned_cols=190 Identities=16% Similarity=0.189 Sum_probs=135.2
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh---hcCce
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQGIV 104 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH---s~gIv 104 (712)
...++.++||||+++++ +|.+. ..+++++|| .+++|.++++ .+++.++..|+.||+.||+||| +.+|+
T Consensus 734 ~~~l~~l~HpnIv~~~~-~~~~~---~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 734 IADMGKLQHPNIVKLIG-LCRSE---KGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred HHHHhhCCCCCcceEEE-EEEcC---CCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 55678899999999888 55332 345666666 6999999994 2789999999999999999999 67999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++..+..++. ++.......
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-------------------------------------------------- 834 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-------------------------------------------------- 834 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-ecccccccc--------------------------------------------------
Confidence 99999999999987777664 332210000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||++.+..++.++|||||||++||
T Consensus 835 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~e 870 (968)
T PLN00113 835 --------------------------------------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIE 870 (968)
T ss_pred --------------------------------------------CCCccccccccCcccccCCCCCcccchhhHHHHHHH
Confidence 001356889999999998889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHh--hc--------ccCCCc---hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC---PFSTGEE---KTRTMSS--LR--------HRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~--~~--------~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ....+.. .. ...... .......+..+++.+||+.+|++|||+.|+++
T Consensus 871 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 871 LLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 999 5432111 0000000 00 000000 00111123448899999999999999999987
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-22 Score=208.45 Aligned_cols=248 Identities=18% Similarity=0.199 Sum_probs=152.7
Q ss_pred eeeccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 24 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 24 r~~~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
|-..+...|.. .++.||+++.+ . -.+.+..+++++| .....++++. .++..+++.+++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~---~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-C---FRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-h---hccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhcc
Confidence 33344444544 57888888777 3 3456677777777 6778888773 378999999999999999999999
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCC-cccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDS-HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|||||||||+||+.+ ..+.-.++|||++....... .+. -...+.+ ..+.+.+.
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~-------------------s~~~~~~------~~~~~~g~ 206 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEH-------------------SRSYSGR------HATPAMGK 206 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhhhh-------------------hhhhhcc------cCCccccC
Confidence 999999999999998 45677899999996421110 000 0000000 00000000
Q ss_pred CCcccccccCCCcccccccccccccccccccccccccccccc--CCCCcccccccccCccccCcccccCCC-CCCccchH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 256 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIw 256 (712)
....-.+ -++ +....-.+ ....|.......||++|+|||++...+ .++++|||
T Consensus 207 ~~~~~~~------~~~------------------~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 207 DVHCQSV------ATA------------------SKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred ccccccc------ccc------------------cCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 0000000 000 00000000 111222233468999999999998776 79999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHh---------------hccc--------------------------CCC----
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSS---------------LRHR--------------------------VLP---- 288 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~---------------~~~~--------------------------~~~---- 288 (712)
|.||++.-+++ ||+...+...+... +... ..+
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 99999999998 77643221111110 0000 000
Q ss_pred ----chhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 289 ----PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 289 ----~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
......++ ...+|+.+||..||.+|.|++++|+||||...
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00111122 33499999999999999999999999999944
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-23 Score=218.42 Aligned_cols=183 Identities=28% Similarity=0.464 Sum_probs=154.1
Q ss_pred ceEEEEeeC-CccHHHhhc--CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCC
Q 005147 56 PFVHAIEWG-DVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (712)
Q Consensus 56 ~~~l~~e~~-g~sL~~~l~--~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~ 132 (712)
.++|.|+++ ..+|.+||. ......+...++.++.|+..+++| +|.+|+|+||.||+...+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 467777775 889999993 445567899999999999999999 99999999999999998889999988887443
Q ss_pred CCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 005147 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (712)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (712)
...+ |....++
T Consensus 407 ~~~~---------------------------------------------------~~~~~~a------------------ 417 (516)
T KOG1033|consen 407 DKDE---------------------------------------------------TVAPAAA------------------ 417 (516)
T ss_pred ccCC---------------------------------------------------cccchhh------------------
Confidence 2210 0000000
Q ss_pred cccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhh
Q 005147 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 292 (712)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (712)
..+..+||.|||+||.+.+..|+.++|||+||++||||+.+|....+...++.+++++++|+.+.
T Consensus 418 ---------------~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 418 ---------------SHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred ---------------hhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 11236899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 293 ~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
..+|....|+.+||.+.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999977776666654
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=218.87 Aligned_cols=205 Identities=16% Similarity=0.129 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..++-.+.|+|+++||+.+. ..++++|+|+ ..|+|.+.|++ ....|.......|+.||+.|+.||-++++|
T Consensus 160 rEas~M~~L~H~hliRLyGvVl-----~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlv 234 (1039)
T KOG0199|consen 160 REASHMLKLQHPHLIRLYGVVL-----DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLV 234 (1039)
T ss_pred HHHHHHHhccCcceeEEeeeec-----cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4555788899999999999554 2567888888 59999999965 455688888999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||-..|+++-....|||+|||+.+..|..+-... |+
T Consensus 235 HRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m~------------ 272 (1039)
T KOG0199|consen 235 HRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------MA------------ 272 (1039)
T ss_pred hhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------ec------------
Confidence 999999999999999999999999977655420000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ...-...|+|||.++...++.+||+|++||++||
T Consensus 273 --------------------p-------------------------~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 273 --------------------P-------------------------QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred --------------------C-------------------------CCcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 0 0112456999999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
||+ ||.+... ..+++.+..+..-+.......+..+++..||..+|++|||+..|...-+
T Consensus 308 MFtyGEePW~G~~g-~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 308 MFTYGEEPWVGCRG-IQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred hhccCCCCCCCCCH-HHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 999 6665443 4555666555544444445556669999999999999999998865433
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-23 Score=216.59 Aligned_cols=147 Identities=26% Similarity=0.362 Sum_probs=123.0
Q ss_pred ccceeeccCC---CCCcccccccccccccccCceEEEEee--CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~---H~ni~~~~~~~~~~~~~~~~~~l~~e~--~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
.+..||+.++ |+||+++++ +|++. +.||+.+|. .|.+|.++|... ..+++.++..||+|++.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEdd---d~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDD---DYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecC---CeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhcccccccc
Confidence 5666788877 999999999 77543 457888887 589999999443 3499999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||||-+|++++.+|-+|+||||.+...... -|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~ksg----------------------------------pf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG----------------------------------PF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhhcCC----------------------------------Cc----------
Confidence 9999999999999999999999999987322110 11
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (712)
-..+||..|+|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 01689999999999999986 78999999999
Q ss_pred HHHHhhC---CCC
Q 005147 261 LLFELFC---PFS 270 (712)
Q Consensus 261 ll~eLl~---pf~ 270 (712)
+||-++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999886 664
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-21 Score=184.54 Aligned_cols=210 Identities=17% Similarity=0.177 Sum_probs=173.2
Q ss_pred CCCCCCCCcccccccCCCCCCCCccccCCC----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 488 PVKPSGRPLVRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
+.+.++..+++++.|++||+.++..+.++. .......+||.+.|..+.| .+....++..++.++...+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w-~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCW-DPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhhee-CCCCCcceEEecCCceEEEE
Confidence 467788899999999999998866554432 2234567899999999999 77777788888888888889
Q ss_pred EccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC----------------------------cc
Q 005147 558 DLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------------------------RD 606 (712)
Q Consensus 558 dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~----------------------------~~ 606 (712)
|.+.+++.. ....-.-+.|+|+|++++.++.|..|.+.|.++..... ..
T Consensus 93 d~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ 172 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVE 172 (313)
T ss_pred EeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEE
Confidence 999988763 35555678999999999999999999999998721000 00
Q ss_pred -----cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 607 -----IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 607 -----~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
...|+ ...+|.+...||.|+| ++.+||+|+.|..|.|||+...-|++.+..|..+|..++|+ .||++|||||
T Consensus 173 ILsypsLkpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS-~dg~~lASaS 250 (313)
T KOG1407|consen 173 ILSYPSLKPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS-HDGRMLASAS 250 (313)
T ss_pred EEeccccccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhhheeeccccCceEEEEec-cCcceeeccC
Confidence 00112 2347889999999999 69999999999999999999999999999999999999999 6999999999
Q ss_pred CCCcEEEEeCCCCcEEEEEe
Q 005147 681 DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|..|-|-++.+|..+-.+-
T Consensus 251 EDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred ccceEEeEecccCCeEEEee
Confidence 99999999999999886653
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-21 Score=185.61 Aligned_cols=204 Identities=14% Similarity=0.134 Sum_probs=155.9
Q ss_pred hhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCC-----------CccceecccCCCCCCcEEEEEcC
Q 005147 483 LTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY-----------SEGRRSGWINPFLEGLCKYLSFS 551 (712)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~-----------~~~~~~~~~~~~~~~~~~~~~~~ 551 (712)
.++.++.+.||..++.+.-|++|++.+...+.+ ...+..-.++ ..|-...+ +|+ ...++....+
T Consensus 44 ~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqD---GklIvWDs~TtnK~haipl~s~WVMtCA~-sPS-g~~VAcGGLd 118 (343)
T KOG0286|consen 44 QMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQD---GKLIVWDSFTTNKVHAIPLPSSWVMTCAY-SPS-GNFVACGGLD 118 (343)
T ss_pred eeeeEEEecccccceeeeEecCCcCeEEeeccC---CeEEEEEcccccceeEEecCceeEEEEEE-CCC-CCeEEecCcC
Confidence 334445678999999999999998876211111 1122222222 22333344 232 2344444555
Q ss_pred CcEEEEEccCC----------ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 552 KLRVKADLNQG----------DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 552 ~~~v~~dl~~~----------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
+...++++.+. .+.+|.+.++|+.|-+ ...|+|+|.|.++.+||+.+++ ......+|...|.
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~-------~~~~f~GH~gDV~ 190 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ-------QTQVFHGHTGDVM 190 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce-------EEEEecCCcccEE
Confidence 55556666533 2568999999999987 5578899999999999997743 3445679999999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++++.|.+++.|+||+.|+..+|||+|.+.++++|.+|+..|++|.|.| +|.-|++||+|+++++||+|....+..+-
T Consensus 191 slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 191 SLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAVYS 268 (343)
T ss_pred EEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEeeec
Confidence 9999998899999999999999999999999999999999999999998 99999999999999999999988886553
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-21 Score=196.59 Aligned_cols=200 Identities=20% Similarity=0.256 Sum_probs=154.5
Q ss_pred CCCcccccccCCCCCCCCccccCCC-------CCCceeeccCCCccceecc-------cCCCCCCcEEEEEcCCcEEE--
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGW-------INPFLEGLCKYLSFSKLRVK-- 556 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~-- 556 (712)
.+..|++..|+.||..+++.+.+.. ..-..+|--|.++++.+.| +++..|+++.+|+..++.+.
T Consensus 234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred ccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 3457999999999998866544321 2233467789999999988 22334555555554333221
Q ss_pred ------------EEc----------------------cCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 557 ------------ADL----------------------NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 557 ------------~dl----------------------~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
|.- ..+++.||.+.|.++.|+|.+.+|+|||.|+++|||......
T Consensus 314 f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~- 392 (524)
T KOG0273|consen 314 FEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN- 392 (524)
T ss_pred eeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc-
Confidence 100 122355799999999999999999999999999999975321
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCC--------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYI--------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~--------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+.-...+|...|..+.|+|.+ +..+|+++.|++|++||+..+.++.+|..|..+|++|+|+| ++.
T Consensus 393 ------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~-~g~ 465 (524)
T KOG0273|consen 393 ------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSP-NGR 465 (524)
T ss_pred ------chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecC-CCc
Confidence 122345678888888887742 45899999999999999999999999999999999999998 999
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|+||.|+.|.+|++++++.+..+-
T Consensus 466 ylAsGs~dg~V~iws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 466 YLASGSLDGCVHIWSTKTGKLVKSYQ 491 (524)
T ss_pred EEEecCCCCeeEeccccchheeEeec
Confidence 99999999999999999999887654
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=224.08 Aligned_cols=201 Identities=16% Similarity=0.194 Sum_probs=155.2
Q ss_pred cceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++.. ..|+||+.+++ ++.. ..+++++.|+ ..|+|.++|+... ..++..+...+..|
T Consensus 351 El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~Q 426 (609)
T KOG0200|consen 351 ELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQ 426 (609)
T ss_pred HHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHH
Confidence 3334555 46999999999 5533 3445555555 7999999995544 23888999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.|++||++.++|||||-..|||+..+..+||+|||++++.........
T Consensus 427 Ia~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~------------------------------ 476 (609)
T KOG0200|consen 427 IANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRT------------------------------ 476 (609)
T ss_pred HHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEe------------------------------
Confidence 99999999999999999999999999999999999999975422210000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc--CccccCcccccCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME--TNWYASPEELAGAP 248 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~ 248 (712)
....| ...|||||.+....
T Consensus 477 -----------------------------------------------------------~~~~~~LP~kWmApEsl~~~~ 497 (609)
T KOG0200|consen 477 -----------------------------------------------------------KSSAGTLPVKWMAPESLFDRV 497 (609)
T ss_pred -----------------------------------------------------------cCCCCccceeecCHHHhccCc
Confidence 00011 23499999999988
Q ss_pred CCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 249 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 249 ~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+.++||||+||+|||+++ ||.........+..++.+..........++..++++.||+.+|++||++.++.+
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999998 887644344456667777666666666667779999999999999999999866
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-22 Score=203.99 Aligned_cols=228 Identities=17% Similarity=0.188 Sum_probs=163.0
Q ss_pred cccccccccccCCCCCcc-eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChh
Q 005147 5 LLRGERFGVRGDDSNDFE-LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 82 (712)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~ 82 (712)
..+||.++|+=-.+++.. +.+|+|..---.+.|+||++++..-..+......++++.+| +.|||.|||.. ..++..
T Consensus 231 ~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~ 308 (513)
T KOG2052|consen 231 RWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTE 308 (513)
T ss_pred cccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHH
Confidence 468999999887776643 45566666666789999999887555444444467777777 79999999955 348999
Q ss_pred HHHHHHHHHHHHHHHhhh-----c---CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCC
Q 005147 83 ECLHIFRQIVEIVYAAHS-----Q---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs-----~---gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (712)
..++++..++.||++||. + .|+|||||..|||+..+|..-|+|+|++-....+.
T Consensus 309 ~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t------------------ 370 (513)
T KOG2052|consen 309 GMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT------------------ 370 (513)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccC------------------
Confidence 999999999999999996 2 59999999999999999999999999984321110
Q ss_pred CCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc
Q 005147 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (712)
Q Consensus 155 ~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (712)
+.+ ....+..+|
T Consensus 371 ----------------------------------------------------~~i----------------di~~N~rVG 382 (513)
T KOG2052|consen 371 ----------------------------------------------------DTI----------------DIPPNPRVG 382 (513)
T ss_pred ----------------------------------------------------Ccc----------------cCCCCCccc
Confidence 000 011223799
Q ss_pred CccccCcccccCCC------CCCccchHHHHHHHHHhhC-------------CCCC---ChhhHHHHHhhc-ccCCCchh
Q 005147 235 TNWYASPEELAGAP------VSCASDIYRLGVLLFELFC-------------PFST---GEEKTRTMSSLR-HRVLPPQL 291 (712)
Q Consensus 235 t~~Y~aPE~~~~~~------~~~~sDIwSlGvll~eLl~-------------pf~~---~~~~~~~~~~~~-~~~~~~~~ 291 (712)
|..|||||++.... .-..+||||||.++||+.. ||.. .+...+.|.++. -..+.|..
T Consensus 383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i 462 (513)
T KOG2052|consen 383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI 462 (513)
T ss_pred eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC
Confidence 99999999995543 2347999999999999985 5543 233344444432 22222222
Q ss_pred hh---cCchh---HHHHHHcCCCCCCCCCCHHHHh
Q 005147 292 LL---KFPKE---ASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 292 ~~---~~~~~---~~li~~~L~~dP~~Rpt~~eiL 320 (712)
++ ..+.. ..+++.||..+|..|.|+-.|.
T Consensus 463 pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 463 PNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 22 22322 3789999999999999876553
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=179.63 Aligned_cols=175 Identities=16% Similarity=0.212 Sum_probs=146.9
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
..-+|+||.+.|+..+| ..|....+....+++++ ||.-+..-. -.+.+|..++|+|.|+++|+||.|+.+-|
T Consensus 47 ~rr~LkGH~~Ki~~~~w---s~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDW---STDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred eEEEecccccceeeeEe---cCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 44789999999999999 55555555555666655 998765422 35899999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|++.+..++. .........+|.+.++|+.|-+ ..+|+|||.|.++.+||+++++.+..|.+|++.|.+++++|.+++
T Consensus 124 y~ls~~d~~g-~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 124 YPLSTRDAEG-NVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred Eecccccccc-cceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 9997522211 1122234679999999999986 579999999999999999999999999999999999999998999
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|+||+-|++.+|||+|.+.++.++.
T Consensus 201 tFvSg~cD~~aklWD~R~~~c~qtF~ 226 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQCVQTFE 226 (343)
T ss_pred eEEecccccceeeeeccCcceeEeec
Confidence 99999999999999999998887665
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=207.35 Aligned_cols=207 Identities=18% Similarity=0.220 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
-+..++..-+||||+.+|+ -| .-.+.+.++||| +|++|.+...- -..+++.++.++++..+.+|.|||++|-+|
T Consensus 61 qei~~~~dc~h~nivay~g-sy---lr~dklwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFG-SY---LRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHh-hh---hhhcCcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 3456688899999999887 33 233456777777 58999985533 345999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||-.||+++..|.||+.|||.+.+++--.
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitati------------------------------------------------- 166 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITATI------------------------------------------------- 166 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhhh-------------------------------------------------
Confidence 9999999999999999999999885442210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sDIwSlGvll 262 (712)
.+.....||++|||||+. +.+.|...+|||++|++.
T Consensus 167 -----------------------------------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 167 -----------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred -----------------------------------------hhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 011226899999999987 455699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchh-HHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.||-- |.+........+.--.....|+.+.. .|... .+|++.+|..+|++|||++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 98876 44433222222222222333443332 34333 399999999999999999999999999876
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=200.46 Aligned_cols=135 Identities=18% Similarity=0.255 Sum_probs=116.9
Q ss_pred eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcE
Q 005147 564 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
+.+|.+.|.+++|+| ++++|||||.|++|+|||+.+...............+|...|.+|+|+|...++|++|+.|++|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 568999999999999 8899999999999999999753211111112234568999999999999656899999999999
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|+|||+++++.+.++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl 206 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSV 206 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEE
Confidence 9999999999999999999999999998 9999999999999999999999887654
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-20 Score=177.17 Aligned_cols=169 Identities=18% Similarity=0.328 Sum_probs=138.0
Q ss_pred ccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCc--EEEEEccCC
Q 005147 485 RCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL--RVKADLNQG 562 (712)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~dl~~~ 562 (712)
++...-.+|+..|++++|+|.|+.+ .+++.|.++.+|.-.++ .+. .
T Consensus 52 ck~vld~~hkrsVRsvAwsp~g~~L---------------------------a~aSFD~t~~Iw~k~~~efecv-----~ 99 (312)
T KOG0645|consen 52 CKTVLDDGHKRSVRSVAWSPHGRYL---------------------------ASASFDATVVIWKKEDGEFECV-----A 99 (312)
T ss_pred EEEeccccchheeeeeeecCCCcEE---------------------------EEeeccceEEEeecCCCceeEE-----e
Confidence 3334445777788888888888877 56677777777764433 332 2
Q ss_pred ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcE
Q 005147 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 563 ~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
.+.||.+.|.|++|+++|++||||+.|+.|-||.+.. .....+..+...|...|-.|.||| +..+|+|+|||.+|
T Consensus 100 ~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de----ddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTI 174 (312)
T KOG0645|consen 100 TLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE----DDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTI 174 (312)
T ss_pred eeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC----CCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeE
Confidence 3558999999999999999999999999999999963 223344556778999999999999 68999999999999
Q ss_pred EEEECC---CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 643 QVWDVS---RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 643 ~lwD~~---~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
++|+-. .-.+++++.+|+..||+++|+| .|..|+|+++|++|+||-..
T Consensus 175 k~~~~~~dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 175 KVYRDEDDDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred EEEeecCCCCeeEEEEecCccceEEEEEecC-CCceEEEecCCcceEeeeec
Confidence 999766 2378999999999999999997 89999999999999999854
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=201.72 Aligned_cols=195 Identities=18% Similarity=0.270 Sum_probs=162.8
Q ss_pred CCcccccccCCCCCCCCccccCCC-------C---CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCC
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNERS-------S---INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG 562 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~~-------~---~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~ 562 (712)
...+.++.|++||+.++....++. . .....+.||...+..+.| +.++...+...++..++ |++...
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~f---s~d~~~l~s~s~D~tiriwd~~~~ 235 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAF---SPDGSYLLSGSDDKTLRIWDLKDD 235 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEE---CCCCcEEEEecCCceEEEeeccCC
Confidence 567888999999997633322211 1 235566899999999999 67776777777777776 999432
Q ss_pred -c----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 563 -D----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 563 -~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
. +.+|...|++++|+|+++++++|+.|++|+|||+++ ..+.....+|...|++++|++ ++++|++++
T Consensus 236 ~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-------~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s 307 (456)
T KOG0266|consen 236 GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-------GECVRKLKGHSDGISGLAFSP-DGNLLVSAS 307 (456)
T ss_pred CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-------CeEEEeeeccCCceEEEEECC-CCCEEEEcC
Confidence 3 448999999999999999999999999999999976 234456778999999999999 699999999
Q ss_pred CCCcEEEEECCCCc--EEEEeccCCCc--EEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQ--VLTEMREHERR--VWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~--~~~~~~~H~~~--v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||.|+|||+.++. ++.++.+++.. +++++|+| ++.++++++.|+.+++||++.+.++..+-
T Consensus 308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp-~~~~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSP-NGKYLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred CCccEEEEECCCCceeeeecccCCCCCCceeEEEECC-CCcEEEEecCCCeEEEEEccCCcceeeec
Confidence 99999999999999 77888888766 99999998 99999999999999999999988876654
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-20 Score=183.70 Aligned_cols=167 Identities=17% Similarity=0.233 Sum_probs=142.1
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.|..++. .|. +...+..+.|....+||+.+|.+. ||-..|..+++++-..|+++||.|+.||+||+.
T Consensus 146 Vi~gHlgWVr~vav-dP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 146 VISGHLGWVRSVAV-DPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hhhhccceEEEEee-CCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 56799999998887 565 334445555666666999888754 799999999999999999999999999999996
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
. . .......+|-+.|.|++.+| +-+.|+||+.|.+++|||+|+...+.++.+|..+|.+|.+.|.|++ ++|
T Consensus 224 ~-----n--kvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpq-vit 294 (460)
T KOG0285|consen 224 Y-----N--KVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQ-VIT 294 (460)
T ss_pred h-----h--hhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCc-eEE
Confidence 4 1 12234568999999999999 6899999999999999999999999999999999999999997766 789
Q ss_pred EECCCcEEEEeCCCCcEEEEEe
Q 005147 679 GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
||.|++|++||++.|+...++.
T Consensus 295 ~S~D~tvrlWDl~agkt~~tlt 316 (460)
T KOG0285|consen 295 GSHDSTVRLWDLRAGKTMITLT 316 (460)
T ss_pred ecCCceEEEeeeccCceeEeee
Confidence 9999999999999999886654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-21 Score=198.25 Aligned_cols=221 Identities=15% Similarity=0.148 Sum_probs=150.8
Q ss_pred ccccccccCCCCC-cceeeeccceeeccCCCCCcccccccccccccc-cCceEEEEee-CCccHHHhhcCCCCCCChhHH
Q 005147 8 GERFGVRGDDSND-FELRKHSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYEC 84 (712)
Q Consensus 8 ~~~~~~~~~~~~~-~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~ 84 (712)
++-++|+--.-++ ..|..|++..-+-.+.|+||+.+++ +-+...+ .-.+.+++++ ..|+|.+||+.+- +++.+.
T Consensus 233 ~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt--isw~~~ 309 (534)
T KOG3653|consen 233 NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLCDYLKANT--ISWNSL 309 (534)
T ss_pred CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHHHHHHhcc--ccHHHH
Confidence 3444444444333 3356777777788899999999888 3322221 2246666666 7999999996544 899999
Q ss_pred HHHHHHHHHHHHHhhh---------cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCC
Q 005147 85 LHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs---------~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (712)
.+|+..+++||+|||+ ..|+|||||..|||+..++..-|+|||++-.+......
T Consensus 310 cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~----------------- 372 (534)
T KOG3653|consen 310 CRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ----------------- 372 (534)
T ss_pred HHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC-----------------
Confidence 9999999999999997 36999999999999999999999999998544211000
Q ss_pred CchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccC
Q 005147 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (712)
Q Consensus 156 ~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (712)
+ .....+||
T Consensus 373 -------------~----------------------------------------------------------d~~~qVGT 381 (534)
T KOG3653|consen 373 -------------G----------------------------------------------------------DTHGQVGT 381 (534)
T ss_pred -------------c----------------------------------------------------------chhhhhhh
Confidence 0 01116899
Q ss_pred ccccCcccccCCC-C-----CCccchHHHHHHHHHhhC---------------CCCC---ChhhHHHHHhh--cccCCC-
Q 005147 236 NWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEEKTRTMSSL--RHRVLP- 288 (712)
Q Consensus 236 ~~Y~aPE~~~~~~-~-----~~~sDIwSlGvll~eLl~---------------pf~~---~~~~~~~~~~~--~~~~~~- 288 (712)
..|||||++.+.. . -.+.||||+|.+||||++ ||.. .......|+.+ ++...|
T Consensus 382 ~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~ 461 (534)
T KOG3653|consen 382 RRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPK 461 (534)
T ss_pred hhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCC
Confidence 9999999996653 2 247999999999999997 1110 01112222221 222222
Q ss_pred -chhhhcCch---hHHHHHHcCCCCCCCCCCHHHH
Q 005147 289 -PQLLLKFPK---EASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 289 -~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ei 319 (712)
+..+...+. ..+.+..||..||+.|.|+.-+
T Consensus 462 ~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 462 IPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred ChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 122222222 2388899999999999997654
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=171.22 Aligned_cols=202 Identities=16% Similarity=0.214 Sum_probs=162.0
Q ss_pred CCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCC
Q 005147 493 GRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG 562 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~ 562 (712)
..++|......||+..++.. ....+..|.+++.||+..|..+.| -.+|.-.+++.+++.++ ||++..
T Consensus 39 ~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF---~~dgrWMyTgseDgt~kIWdlR~~ 115 (311)
T KOG0315|consen 39 PDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGF---QCDGRWMYTGSEDGTVKIWDLRSL 115 (311)
T ss_pred CccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEE---eecCeEEEecCCCceEEEEeccCc
Confidence 34566666677777766332 223344589999999999999888 68888888888888877 999874
Q ss_pred ce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc----------------------------------
Q 005147 563 DL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR---------------------------------- 605 (712)
Q Consensus 563 ~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~---------------------------------- 605 (712)
.+ ..|.++|++|..+|...-|++|..+|.|++||+..-.+.+.
T Consensus 116 ~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~ 195 (311)
T KOG0315|consen 116 SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWR 195 (311)
T ss_pred ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEE
Confidence 43 36889999999999888899999999999999986211110
Q ss_pred -------ccccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 606 -------DIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 606 -------~~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
....|+ ...+|...+..+.++| +..+||++|.|.+|+||...+- +.-.++++|..++|.++|| .|+.+|
T Consensus 196 l~~~~~~s~l~P~~k~~ah~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS-~dg~Yl 273 (311)
T KOG0315|consen 196 LLNHQTASELEPVHKFQAHNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFS-ADGEYL 273 (311)
T ss_pred ccCCCccccceEhhheecccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeec-cCccEE
Confidence 000111 2346888899999999 6999999999999999999887 6677889999999999999 599999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEE
Q 005147 677 ASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|||.|+.+++||+..++.+...
T Consensus 274 vTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 274 VTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred EecCCCCceeecccccCceeeec
Confidence 99999999999999999988654
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-21 Score=210.86 Aligned_cols=201 Identities=15% Similarity=0.135 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||+++|++ ++.... +.|+.++ ++|+|.++++.....+-....+.|..||++|+.|||.+++||
T Consensus 747 deAl~masldHpnl~RLLg-vc~~s~----~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVH 821 (1177)
T KOG1025|consen 747 DEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVH 821 (1177)
T ss_pred HHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 4556789999999999999 664332 4555555 799999999777777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|+|+...++||+.|||+++....++.+..
T Consensus 822 rdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--------------------------------------------- 856 (1177)
T KOG1025|consen 822 RDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--------------------------------------------- 856 (1177)
T ss_pred hhhhhhheeecCCCeEEEEecchhhccCccccccc---------------------------------------------
Confidence 99999999999999999999999976554432210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+. ..-.+-|||-|.++...|+.++||||+||++|||
T Consensus 857 -----------------------~~~--------------------gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 857 -----------------------APG--------------------GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred -----------------------ccc--------------------cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 000 0114458999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+| |++..... ..-..+..+..-++.+...-+..-++.+||..|+..||+++++..
T Consensus 894 mTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 894 MTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 99 77654332 333334444333343444455667899999999999999988755
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=191.59 Aligned_cols=205 Identities=21% Similarity=0.249 Sum_probs=155.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc-----C--CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~-----~--~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
..+...|-...|||+..+.+ ++. +....+++++...+-++|..+|. + ..+.++-.+...++.||..|++||
T Consensus 335 L~es~lly~~sH~nll~V~~-V~i-e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 335 LQESMLLYGASHPNLLSVLG-VSI-EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHHHhcCcCCCccceeE-EEe-eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 34555677788999999998 443 34556888887778899999995 2 234577788889999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|..||||.||-..|.+|+..-+||++|..++++.=.. |+
T Consensus 413 h~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~----------------------------------DY------- 451 (563)
T KOG1024|consen 413 HNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPG----------------------------------DY------- 451 (563)
T ss_pred HhcCcccchhhhhcceehhheeEEeccchhccccCcc----------------------------------cc-------
Confidence 9999999999999999999999999999999764111 11
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.| +-|. . -...-|||||.+....|+.++|+|||
T Consensus 452 ------hc---------------------LGDn-----------E---------nRPvkWMslEal~n~~yssasDvWsf 484 (563)
T KOG1024|consen 452 ------HC---------------------LGDN-----------E---------NRPVKWMSLEALQNSHYSSASDVWSF 484 (563)
T ss_pred ------cc---------------------cCCC-----------C---------CCcccccCHHHHhhhhhcchhhhHHH
Confidence 01 0000 0 01345899999999999999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||+||||+| ||..-+ ..+....+..+..-.+..+...+...++.-||...|++||+.+|+..
T Consensus 485 GVllWELmtlg~~PyaeID-PfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 485 GVLLWELMTLGKLPYAEID-PFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHhcCCCCccccC-HHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999998 664333 33445555555444444444444558999999999999999999865
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-20 Score=182.80 Aligned_cols=173 Identities=27% Similarity=0.335 Sum_probs=138.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..+.|++++.+++ .+.. ....++++++ .|++|.+++......++...+..++.+++.+|.+||++|++|
T Consensus 40 ~e~~~~~~l~~~~i~~~~~-~~~~---~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H 115 (215)
T cd00180 40 REIEILKKLNHPNIVKLYG-VFED---ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIH 115 (215)
T ss_pred HHHHHHHhcCCCCeeeEee-eeec---CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3344677788999999887 3322 2456777777 469999999654345899999999999999999999999999
Q ss_pred ccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|.||+++. .+.++++||+.+........
T Consensus 116 ~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------- 148 (215)
T cd00180 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----------------------------------------------- 148 (215)
T ss_pred cCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-----------------------------------------------
Confidence 999999999998 89999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......+...|++||.+... .++.++|+|+||++++
T Consensus 149 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~ 185 (215)
T cd00180 149 -------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILY 185 (215)
T ss_pred -------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHH
Confidence 00013457789999999877 7899999999999999
Q ss_pred HhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCc
Q 005147 264 ELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 264 eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp 323 (712)
+| ....+++.+|+..+|.+||++.+++.|+
T Consensus 186 ~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 186 EL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 99 4455899999999999999999999874
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=181.91 Aligned_cols=191 Identities=17% Similarity=0.289 Sum_probs=159.7
Q ss_pred CCCCcccccccCCCCCCC---------Ccccc--------CC----------------CCCCceeeccCCCccceecccC
Q 005147 492 SGRPLVRHSQLSSDGRTS---------KPLVN--------ER----------------SSINNLGSKEGYSEGRRSGWIN 538 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~---------~~~~~--------~~----------------~~~~~~~l~gh~~~~~~~~~~~ 538 (712)
||+..|.|+...+||... .+++. |. --.|.+.|.||..+|..+.| +
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w-~ 269 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW-S 269 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE-c
Confidence 899999999988888732 12220 00 13699999999999999999 3
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
+ .+.+...++|.....||+.++.+.. .....+||+.+|...+||+||.|..|++||.+++. .-.......+
T Consensus 270 d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~----gs~v~~s~~g 343 (423)
T KOG0313|consen 270 D--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD----GSVVSQSLIG 343 (423)
T ss_pred C--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCC----CceeEEeeec
Confidence 3 5566677788888889999887653 46788999999999999999999999999998741 1122345779
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|++.|++|.|+|.+..+|++|++|+++++||+|+.+ ++.++.+|.+.|.+++|+ ++.+++|||.|++|+|+...
T Consensus 344 H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~--~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 344 HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN--EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred chhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc--CCceEEeccCcceEEEeccc
Confidence 999999999999988999999999999999999887 999999999999999998 78999999999999998654
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=176.61 Aligned_cols=193 Identities=16% Similarity=0.226 Sum_probs=163.4
Q ss_pred CCCCCCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-AD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~d 558 (712)
.+++|++.+....|.|||...+.. .....+..-..++||+++|-++.| ..|+...+....+.++. ||
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~---~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHG---MRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeee---ccCCCEEEEecCCceEEEEe
Confidence 468999999999999999965443 223446667899999999999999 67887777777777776 99
Q ss_pred ccCCcee----cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE
Q 005147 559 LNQGDLL----NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 559 l~~~~~~----~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 633 (712)
.++|+.. +|.+-|+++.-++- ..++.||+.|+++||||+|+ ..++.....+-.++++.|+. ++..+
T Consensus 119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~--------k~~~~t~~~kyqltAv~f~d-~s~qv 189 (338)
T KOG0265|consen 119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK--------KEAIKTFENKYQLTAVGFKD-TSDQV 189 (338)
T ss_pred cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc--------cchhhccccceeEEEEEecc-cccce
Confidence 9998865 68899999885553 45889999999999999985 22344455677899999996 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.+|+-|+.|++||++....+.++.+|.++|+.+..+| +|.++.|-|-|+++++||++-..
T Consensus 190 ~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~tvrvwd~rp~~ 249 (338)
T KOG0265|consen 190 ISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSR-YGSFLLSNSMDNTVRVWDVRPFA 249 (338)
T ss_pred eeccccCceeeeccccCcceEEeecccCceeeEEecc-CCCccccccccceEEEEEecccC
Confidence 9999999999999999999999999999999999997 99999999999999999997533
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-19 Score=171.58 Aligned_cols=168 Identities=15% Similarity=0.188 Sum_probs=136.6
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---------eecCCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---------LLNSSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---------~~~h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
-+|+||++.|.++.. .+....++..++.++..+.|++...+ +.||+..|.++..++||++++++|.|+++
T Consensus 9 ~tl~gh~d~Vt~la~-~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l 87 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAI-KIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL 87 (315)
T ss_pred eeecCCCceEEEEEe-ecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence 478899999988887 34455566666666666778885322 45899999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--CCcEEEEEEec
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--ERRVWSIDFSS 670 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~~~v~sv~fsp 670 (712)
++||+.++ .......+|...|.+|+|+| +...++||+.|.+|++|++-.. +..+..++ .++|.||.|+|
T Consensus 88 rlWDl~~g-------~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 88 RLWDLATG-------ESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred EEEEecCC-------cEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcC
Confidence 99999763 33456779999999999999 6899999999999999998754 44455444 78999999999
Q ss_pred CC-CCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 671 AD-PTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 671 ~~-~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.. ..+|+++|.|++||+||+++-+....+
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhcc
Confidence 53 679999999999999999976554433
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=194.57 Aligned_cols=157 Identities=18% Similarity=0.326 Sum_probs=128.5
Q ss_pred CCccceecccCCCCCCcEEEE-EcCCcEEEEEcc------CCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 528 YSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLN------QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~------~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
...+..+.+ +.+|...+. +.+.....|... ...+.+|...|.+++|+|++.++++|+.|++|+|||+..
T Consensus 159 ~~sv~~~~f---s~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~- 234 (456)
T KOG0266|consen 159 CPSVTCVDF---SPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD- 234 (456)
T ss_pred cCceEEEEE---cCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccC-
Confidence 344445555 344443233 333334447763 333458999999999999999999999999999999932
Q ss_pred cccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 601 INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
......+..+|...|++++|+|. ++.+++|++|++|+|||+++++++..+.+|.+.|++++|++ ++++|+++|
T Consensus 235 -----~~~~~~~l~gH~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s 307 (456)
T KOG0266|consen 235 -----DGRNLKTLKGHSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSAS 307 (456)
T ss_pred -----CCeEEEEecCCCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcC
Confidence 12344567799999999999995 69999999999999999999999999999999999999997 999999999
Q ss_pred CCCcEEEEeCCCCcE
Q 005147 681 DDGSVKLWSINQAIL 695 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~ 695 (712)
.|+.|+|||+.++..
T Consensus 308 ~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSK 322 (456)
T ss_pred CCccEEEEECCCCce
Confidence 999999999999984
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-19 Score=175.23 Aligned_cols=186 Identities=14% Similarity=0.222 Sum_probs=151.8
Q ss_pred hhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcC
Q 005147 472 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFS 551 (712)
Q Consensus 472 ~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~ 551 (712)
.++=+++++|-..|. ..+|.--|.++.|-|-|..+ ++.+.|..++.|..+
T Consensus 174 ~~LWd~~~~~~c~ks---~~gh~h~vS~V~f~P~gd~i---------------------------lS~srD~tik~We~~ 223 (406)
T KOG0295|consen 174 AKLWDFDTFFRCIKS---LIGHEHGVSSVFFLPLGDHI---------------------------LSCSRDNTIKAWECD 223 (406)
T ss_pred hhheeHHHHHHHHHH---hcCcccceeeEEEEecCCee---------------------------eecccccceeEEecc
Confidence 666777887554443 44555556677776665544 677888888888877
Q ss_pred CcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC--
Q 005147 552 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-- 629 (712)
Q Consensus 552 ~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-- 629 (712)
++-.+..+ .+|..+|..+..+.||.+||+||.|.+|++|-+.+. .+......|.-+|-|++|-|..
T Consensus 224 tg~cv~t~-----~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~-------~~k~~lR~hEh~vEci~wap~~~~ 291 (406)
T KOG0295|consen 224 TGYCVKTF-----PGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATK-------QCKAELREHEHPVECIAWAPESSY 291 (406)
T ss_pred cceeEEec-----cCchHhEEEEEecCCeeEEEecCCCceEEEEEeccc-------hhhhhhhccccceEEEEecccccC
Confidence 77655444 468999999999999999999999999999999763 2234445677788899887742
Q ss_pred -------C-----CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 630 -------K-----SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 630 -------~-----~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+ .++++++.|++|++||+.+|.|+.++.+|..+|.+++|+| .|++|+|+.+|+++++||++++.+..
T Consensus 292 ~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk 370 (406)
T KOG0295|consen 292 PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMK 370 (406)
T ss_pred cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeee
Confidence 2 4999999999999999999999999999999999999998 89999999999999999999999987
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
++.
T Consensus 371 ~~~ 373 (406)
T KOG0295|consen 371 TLE 373 (406)
T ss_pred ccC
Confidence 765
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=190.05 Aligned_cols=167 Identities=13% Similarity=0.140 Sum_probs=133.6
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-----------ceecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-----------DLLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-----------~~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
..+.||.+.|..+.| +++.+..+..++.+....+|++..+ .+.+|...|.+++|+|++ ++|++|+.|
T Consensus 69 ~~l~GH~~~V~~v~f-sP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 69 PILLGQEGPIIDVAF-NPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred ceEeCCCCCEEEEEE-cCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC
Confidence 457899999999999 7766666666666555556998754 245799999999999975 699999999
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCc-EEEEEE
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERR-VWSIDF 668 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~-v~sv~f 668 (712)
++|+|||+.++. .......|...|.+++|+| ++.+|++|+.||+|+|||+++++.+.++.+|.+. +..+.|
T Consensus 148 gtVrIWDl~tg~-------~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w 219 (493)
T PTZ00421 148 MVVNVWDVERGK-------AVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW 219 (493)
T ss_pred CEEEEEECCCCe-------EEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE
Confidence 999999997631 2223446888999999999 6999999999999999999999999999999875 446788
Q ss_pred ecCCCCEEEEEE----CCCcEEEEeCCCCcEEEE
Q 005147 669 SSADPTLLASGS----DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 669 sp~~~~~l~sgs----~D~~v~lWd~~~~~~v~~ 698 (712)
+| ++..+++++ .|+.|++||+++......
T Consensus 220 ~~-~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~ 252 (493)
T PTZ00421 220 AK-RKDLIITLGCSKSQQRQIMLWDTRKMASPYS 252 (493)
T ss_pred cC-CCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence 87 556666554 489999999997654333
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=183.67 Aligned_cols=201 Identities=16% Similarity=0.130 Sum_probs=162.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCC-CccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+..|++.|++..||.+|..+...+.. ..........+|. ..|..++| ++ .|.....++.+....+||...
T Consensus 134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlaf-Sp-nDskF~t~SdDg~ikiWdf~~ 211 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAF-SP-NDSKFLTCSDDGTIKIWDFRM 211 (464)
T ss_pred hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheecc-CC-CCceeEEecCCCeEEEEeccC
Confidence 34688999999999999976222211 1222233444555 88999998 66 555555555555555599875
Q ss_pred Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+ +.||..-|.+++|+|...++|+||.|..||+||.+++. +..+...|+..|..+.|+| ++++|+|+|
T Consensus 212 ~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKntVl~~~f~~-n~N~Llt~s 283 (464)
T KOG0284|consen 212 PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKNTVLAVKFNP-NGNWLLTGS 283 (464)
T ss_pred CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccceEEEEEEcC-CCCeeEEcc
Confidence 44 57999999999999999999999999999999998753 4456678999999999999 589999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|..++++|+|+.+.++++.+|++.|+++.|+|....+|++|+.||.|..|.+-..+++..+-
T Consensus 284 kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~ 346 (464)
T KOG0284|consen 284 KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIP 346 (464)
T ss_pred CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999998656654443
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=178.44 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=148.5
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
..|..-|--..||+||+++|..+.+.. ..-..++.||..+|.-+.| +| .|..+..+..+....+||.
T Consensus 221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~w-SP-DdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMW-SP-DDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEE-CC-CCCeEEecCchHheeeccC
Confidence 355666777889999999976655442 1113467899999999999 44 3334444455555556999
Q ss_pred cCCcee-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc---------------ccccceE-------
Q 005147 560 NQGDLL-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR---------------DIHYPVV------- 612 (712)
Q Consensus 560 ~~~~~~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~---------------~~~~~~~------- 612 (712)
.+|++. +|...+.+++|.|||..|++|+-|++|..||++......- ++.+.+.
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i 378 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKI 378 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccce
Confidence 999876 3458899999999999999999999999999875211100 0000000
Q ss_pred ------------EecCCCCeEEEEEcCC--------------------------------------------CCCEEEEE
Q 005147 613 ------------EMASRSKLSSICWNSY--------------------------------------------IKSQIASS 636 (712)
Q Consensus 613 ------------~~~~~~~v~~v~~~p~--------------------------------------------~~~~lasg 636 (712)
......+|++++.+.. +..++|||
T Consensus 379 ~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG 458 (519)
T KOG0293|consen 379 RLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASG 458 (519)
T ss_pred eeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEec
Confidence 0112244555544432 24699999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|.|+.|.||+-.+|+++.++.||.+.|+||+|+|.++.++||||+||+|+||...
T Consensus 459 SED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 459 SEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999875
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=187.37 Aligned_cols=169 Identities=12% Similarity=0.161 Sum_probs=133.7
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC------------ceecCCCCeeEEEEcCCCCE-EEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG------------DLLNSSNLVCSLSFDRDGEL-FAA 585 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~------------~~~~h~~~V~~i~f~~~~~~-lat 585 (712)
.+...++||.+.|..++| +++.+.++...+.+....+|++.++ .+.+|...|.+++|+|++.. |+|
T Consensus 65 ~~v~~L~gH~~~V~~laf-sP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 65 PPVIKLKGHTSSILDLQF-NPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred ceEEEEcCCCCCEEEEEE-cCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence 356789999999999999 7765666666665555555999753 23579999999999998874 679
Q ss_pred EeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEE-
Q 005147 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW- 664 (712)
Q Consensus 586 ~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~- 664 (712)
||.|++|+|||++++. ......+...|.+++|+| ++.+|++++.|+.|+|||+++++.+.++.+|.+.+.
T Consensus 144 gS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s 214 (568)
T PTZ00420 144 SGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNT 214 (568)
T ss_pred EeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEEEEEecccCCcee
Confidence 9999999999997632 122334667899999999 699999999999999999999999999999987643
Q ss_pred ----EEEEecCCCCEEEEEECCC----cEEEEeCCC-CcEEEE
Q 005147 665 ----SIDFSSADPTLLASGSDDG----SVKLWSINQ-AILLLH 698 (712)
Q Consensus 665 ----sv~fsp~~~~~l~sgs~D~----~v~lWd~~~-~~~v~~ 698 (712)
...|++ ++.+|+|+|.|+ .|+|||+++ +.++..
T Consensus 215 ~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~ 256 (568)
T PTZ00420 215 KNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVT 256 (568)
T ss_pred EEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEE
Confidence 345566 788888888764 799999995 555544
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.5e-19 Score=187.89 Aligned_cols=152 Identities=18% Similarity=0.289 Sum_probs=128.4
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
++++.|-++++|+++..=. . ...+.||+..|.+|+|.| |.+.||+|+.|++||||.+.. .++..+..+
T Consensus 113 LtsSDDm~iKlW~we~~wa---~-~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs-------~~~nfTl~g 181 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENEWA---C-EQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS-------PHPNFTLEG 181 (794)
T ss_pred EecCCccEEEEeeccCcee---e-eeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC-------CCCceeeec
Confidence 5666777777777665321 1 234678999999999999 778999999999999999954 345567779
Q ss_pred CCCCeEEEEEcCC-CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 616 SRSKLSSICWNSY-IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 616 ~~~~v~~v~~~p~-~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|...|+||++-+. ++.+|+||+.|.+|+|||..+.+|++++++|+..|..+.|+| .-.+++|||.||+|+||+..+.+
T Consensus 182 HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp-~lpiiisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 182 HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHP-ELPIIISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred cccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecC-CCcEEEEecCCccEEEecCccee
Confidence 9999999999662 356999999999999999999999999999999999999998 78999999999999999998876
Q ss_pred EEEEEe
Q 005147 695 LLLHLV 700 (712)
Q Consensus 695 ~v~~~~ 700 (712)
...++.
T Consensus 261 lE~tLn 266 (794)
T KOG0276|consen 261 LEKTLN 266 (794)
T ss_pred hhhhhh
Confidence 655443
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.2e-20 Score=206.78 Aligned_cols=213 Identities=16% Similarity=0.173 Sum_probs=151.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+-..+.|+|++..+.-+++ ... .+.. ||++..+|..++...+ .+...++..+++||+.||+|+|+.||.||
T Consensus 370 sE~~i~~~l~h~~~~e~l~~~~~-~~~--~~~~-mE~~~~Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~Giahr 444 (601)
T KOG0590|consen 370 SEFCIGSSLSHPNIIETLDIVQE-IDG--ILQS-MEYCPYDLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSMGLAHR 444 (601)
T ss_pred hheeecccccCCchhhhHHHHhh-ccc--chhh-hhcccHHHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhcCceec
Confidence 55556677999998776663332 111 1222 6775449999885443 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|+++...|.+|++|||.+..+--+
T Consensus 445 dlK~enll~~~~g~lki~Dfg~~~vf~~~--------------------------------------------------- 473 (601)
T KOG0590|consen 445 DLKLENLLVTENGILKIIDFGAASVFRYP--------------------------------------------------- 473 (601)
T ss_pred cCccccEEEecCCceEEeecCcceeeccC---------------------------------------------------
Confidence 99999999999999999999988432111
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC-CccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~sDIwSlGvll~eL 265 (712)
.+..-. .....+|+..|+|||++.+..|. ...||||.|++++.|
T Consensus 474 ----------------~e~~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m 518 (601)
T KOG0590|consen 474 ----------------WEKNIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICM 518 (601)
T ss_pred ----------------cchhhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEE
Confidence 000000 01126789999999999999986 489999999999999
Q ss_pred hCCCCCCh---hhHH---HHHhhcc---cCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FCPFSTGE---EKTR---TMSSLRH---RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~pf~~~~---~~~~---~~~~~~~---~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.++-+++. .... .+....+ ..-+..++...|... .+|.+||+.+|.+|.|+++|++.+||+....
T Consensus 519 ~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 519 ILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred ecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 98322221 1111 1111111 112233444555554 8999999999999999999999999997643
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=176.99 Aligned_cols=169 Identities=16% Similarity=0.246 Sum_probs=147.1
Q ss_pred CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC--c----eecCCCCeeEEEEcC-CCCEEEEEeC
Q 005147 516 RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG--D----LLNSSNLVCSLSFDR-DGELFAAAGV 588 (712)
Q Consensus 516 ~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~--~----~~~h~~~V~~i~f~~-~~~~lat~~~ 588 (712)
+...|...+.||++.|..+.| .++.+.+....+.+..-.+||++++ + ..+|.+.|.|++|+| ++.+|||||.
T Consensus 215 ~~~~p~~~~~~h~~~VeDV~~-h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~ 293 (422)
T KOG0264|consen 215 KVVDPKTIFSGHEDVVEDVAW-HPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA 293 (422)
T ss_pred ccccceEEeecCCcceehhhc-cccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccC
Confidence 456788999999999999999 8999999888777777777999952 2 236899999999999 5568999999
Q ss_pred CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC--------------cEEE
Q 005147 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--------------QVLT 654 (712)
Q Consensus 589 d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~--------------~~~~ 654 (712)
|++|++||+|... .++....+|...|.+|.|+|...++|||++.|+.+.+||+..- ..++
T Consensus 294 D~tV~LwDlRnL~------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF 367 (422)
T KOG0264|consen 294 DKTVALWDLRNLN------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLF 367 (422)
T ss_pred CCcEEEeechhcc------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeE
Confidence 9999999998632 3566788999999999999998999999999999999999641 2467
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 655 ~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
+--||+..|..++|+|.++..++|.++|+.+.||...
T Consensus 368 ~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 368 IHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred EecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 7789999999999999999999999999999999976
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-18 Score=170.18 Aligned_cols=199 Identities=15% Similarity=0.206 Sum_probs=156.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
..+|..-|+|+.+-|..++.+..+-++- ..-.++|.||-..+.++.+ + .-....+..+.+..|+ |||.
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vav-S--~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAV-S--KRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeee-c--ccCceEEEecCCCeeEEEech
Confidence 4588888999999887666544443331 2345788899999999988 3 3334446666666655 9999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+++ ||-+.|.|++.+|.-+.|+|||.|.+|+|||+++- .......+|+.+|.+|.+.|. ...++||
T Consensus 224 ~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr-------~~V~~l~GH~~~V~~V~~~~~-dpqvit~ 295 (460)
T KOG0285|consen 224 YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR-------ASVHVLSGHTNPVASVMCQPT-DPQVITG 295 (460)
T ss_pred hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc-------ceEEEecCCCCcceeEEeecC-CCceEEe
Confidence 87755 78999999999999999999999999999999872 223456689999999999984 6789999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC---------------------------------------CCCEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA---------------------------------------DPTLLA 677 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~---------------------------------------~~~~l~ 677 (712)
|.|++|++||++.|+...++..|...|.+++.+|. ...+++
T Consensus 296 S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~ 375 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLV 375 (460)
T ss_pred cCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCceEE
Confidence 99999999999999998898888888888888871 234677
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|++.|.+..||.++|......
T Consensus 376 ~G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 376 SGGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred EcCCceEEEEEecCcCcccccc
Confidence 7888888888888877665443
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=186.46 Aligned_cols=174 Identities=20% Similarity=0.251 Sum_probs=139.2
Q ss_pred eeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCc--------eecCCCCeeEEEEcCCC-CEEEEEeCCCc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGD--------LLNSSNLVCSLSFDRDG-ELFAAAGVNKK 591 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~--------~~~h~~~V~~i~f~~~~-~~lat~~~d~~ 591 (712)
..+.||+..+.+++- +.+| ++...+-|+..++|.+..+. ..+|.+.|.+|+++..+ .+|+++|.|++
T Consensus 359 ~ii~GH~e~vlSL~~---~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~t 435 (775)
T KOG0319|consen 359 QIIPGHTEAVLSLDV---WSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCT 435 (775)
T ss_pred EEEeCchhheeeeee---cccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCce
Confidence 378899999998882 3455 44444444444558774321 33799999999998755 59999999999
Q ss_pred EEEEEcCCccccCc--ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 592 IKVFECDAIINENR--DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 592 I~iwD~~~~~~~~~--~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
||+|++........ ...+..+...|...|+||+.+| +..+|||||.|.+.+||++..+..+.++.+|+..||||.|+
T Consensus 436 lK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs 514 (775)
T KOG0319|consen 436 LKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFS 514 (775)
T ss_pred EEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEEec
Confidence 99999976211111 1111224568999999999999 58899999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
| ..+++||+|.|++||||.+.+..|+.++-
T Consensus 515 ~-~dq~laT~SgD~TvKIW~is~fSClkT~e 544 (775)
T KOG0319|consen 515 K-NDQLLATCSGDKTVKIWSISTFSCLKTFE 544 (775)
T ss_pred c-ccceeEeccCCceEEEEEeccceeeeeec
Confidence 8 77999999999999999999999987653
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.8e-19 Score=182.75 Aligned_cols=171 Identities=15% Similarity=0.212 Sum_probs=140.8
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC-Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ-GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~-~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
..+.||+..|..+.| -+..-.|+..++.+....+|++.. +. +.+|..+|.+++|+++|..|.|+|.|+.||+||
T Consensus 208 ~~~~gH~kgvsai~~-fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQW-FPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeccCCccccchhhh-ccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence 567788888888888 333344444444443334477764 33 458999999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
+.++. ....+.....++||.|+|.+.+.|++|+.|+.|+.||+|+++.+++|..|-+.|.++.|-| ++..+
T Consensus 287 tETG~--------~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g~rF 357 (503)
T KOG0282|consen 287 TETGQ--------VLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EGRRF 357 (503)
T ss_pred cccce--------EEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CCceE
Confidence 98853 2444556778899999998779999999999999999999999999999999999999997 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEece
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
+|.|+|++++||+.+.+.++..+.+.
T Consensus 358 issSDdks~riWe~~~~v~ik~i~~~ 383 (503)
T KOG0282|consen 358 ISSSDDKSVRIWENRIPVPIKNIADP 383 (503)
T ss_pred eeeccCccEEEEEcCCCccchhhcch
Confidence 99999999999999998888766543
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.8e-18 Score=161.44 Aligned_cols=168 Identities=17% Similarity=0.214 Sum_probs=138.2
Q ss_pred CCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-----ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCcc
Q 005147 528 YSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-----DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAII 601 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-----~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~ 601 (712)
.+..+++.| +...+..+..++++..--+||+.-. .+..|...|.++.|++ ..+.++++|.|++||+||....
T Consensus 60 ~D~LfdV~W-se~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~- 137 (311)
T KOG0277|consen 60 EDGLFDVAW-SENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP- 137 (311)
T ss_pred ccceeEeee-cCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC-
Confidence 345688999 8888888888888766666886432 2336999999999998 5668899999999999998541
Q ss_pred ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC
Q 005147 602 NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
....+..+|.+.|....|+|.++++++++|.||+++|||++.......+..|...|.|++|+..+..+++||+-
T Consensus 138 ------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~v 211 (311)
T KOG0277|consen 138 ------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGV 211 (311)
T ss_pred ------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCC
Confidence 22334678999999999999999999999999999999999765555599999999999999888999999999
Q ss_pred CCcEEEEeCCCCcEEEEEecee
Q 005147 682 DGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 682 D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
|+.|++||+++-......+.+|
T Consensus 212 d~~vr~wDir~~r~pl~eL~gh 233 (311)
T KOG0277|consen 212 DNLVRGWDIRNLRTPLFELNGH 233 (311)
T ss_pred CceEEEEehhhccccceeecCC
Confidence 9999999999766444444554
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=168.34 Aligned_cols=178 Identities=21% Similarity=0.279 Sum_probs=136.2
Q ss_pred CceeeccCCCccceecccCCCCC-CcEEEEEcCCcEEEEEccCCc--------eecCCCCeeEEEEcCCCCEEEEEeCCC
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLE-GLCKYLSFSKLRVKADLNQGD--------LLNSSNLVCSLSFDRDGELFAAAGVNK 590 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~dl~~~~--------~~~h~~~V~~i~f~~~~~~lat~~~d~ 590 (712)
-.....||++++....|+..... +++..++.+..-.+|....+. +.||...|.+|+..++|..|++|+.|.
T Consensus 136 ~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~ 215 (423)
T KOG0313|consen 136 SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDT 215 (423)
T ss_pred eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccc
Confidence 35678899999999999765544 334444444444446665443 348999999999999999999999999
Q ss_pred cEEEEEcCCcc------------------ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-
Q 005147 591 KIKVFECDAII------------------NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ- 651 (712)
Q Consensus 591 ~I~iwD~~~~~------------------~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~- 651 (712)
+|+||+..+.. .........+...+|..+|.+|.|++ ...++++++|.+|+.||+.+++
T Consensus 216 ~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~ 293 (423)
T KOG0313|consen 216 MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGL 293 (423)
T ss_pred eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecccc
Confidence 99999943210 01111223455678999999999987 6788888888888888877643
Q ss_pred -------------------------------------------EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 652 -------------------------------------------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 652 -------------------------------------------~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
+..+|.+|...|.+|.|+|.+...|+|||.|+++++|
T Consensus 294 ~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klW 373 (423)
T KOG0313|consen 294 KSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLW 373 (423)
T ss_pred eeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEE
Confidence 3456789999999999999999999999999999999
Q ss_pred eCCCCc-EEEEE
Q 005147 689 SINQAI-LLLHL 699 (712)
Q Consensus 689 d~~~~~-~v~~~ 699 (712)
|+|+.+ +++.+
T Consensus 374 DvRS~k~plydI 385 (423)
T KOG0313|consen 374 DVRSTKAPLYDI 385 (423)
T ss_pred EeccCCCcceee
Confidence 999988 55544
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=165.42 Aligned_cols=170 Identities=17% Similarity=0.254 Sum_probs=146.6
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
..+++.+|+++++.++. +| ...+++....++...+|++.+|.+ .+|.+.|+++.|+.+|.+||||+.+|.|+||
T Consensus 56 S~~tF~~H~~svFavsl-~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~ 133 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSL-HP-NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF 133 (399)
T ss_pred ceeehhhcCCceEEEEe-CC-CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence 35788999999999998 67 555655556666667799998874 4899999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
+..++.. .......-..+.-++||| .+..|+.|+.||.|-+|.+.++...+.|.+|..+|++=.|.| +|+.
T Consensus 134 ~~stg~~-------~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-dGKr 204 (399)
T KOG0296|consen 134 KVSTGGE-------QWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-DGKR 204 (399)
T ss_pred EcccCce-------EEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-CCce
Confidence 9976321 122223456788899999 699999999999999999999888999999999999999998 8999
Q ss_pred EEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 676 LASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+++|.+||+|++||..++.++..+-
T Consensus 205 ~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 205 ILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred EEEEecCceEEEEecCCCceeEEec
Confidence 9999999999999999999987765
|
|
| >KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-18 Score=163.23 Aligned_cols=169 Identities=17% Similarity=0.288 Sum_probs=143.9
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCC--CCEEEEEeCCC
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRD--GELFAAAGVNK 590 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~--~~~lat~~~d~ 590 (712)
.+..+|+||.+++..+.|++|...++++.++|+.-.++|.-.+|+.. .|...|++|+|.|. |-.||+|+.||
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 57889999999999999999999999999999988888999887643 58999999999995 56899999999
Q ss_pred cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC-------------CEEEEEeCCCcEEEEECCCCc--EEEE
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK-------------SQIASSNFEGVVQVWDVSRSQ--VLTE 655 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-------------~~lasgs~Dg~V~lwD~~~~~--~~~~ 655 (712)
+|.|.+++.. ...........|.-.|++|+|.|-.. ..|+||+.|..|+||+..++. .-++
T Consensus 127 ~vsvl~~~~~----g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~ 202 (299)
T KOG1332|consen 127 KVSVLTYDSS----GGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERT 202 (299)
T ss_pred cEEEEEEcCC----CCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhh
Confidence 9999999762 12223445678999999999999532 359999999999999998874 3456
Q ss_pred eccCCCcEEEEEEecCCC---CEEEEEECCCcEEEEeCC
Q 005147 656 MREHERRVWSIDFSSADP---TLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp~~~---~~l~sgs~D~~v~lWd~~ 691 (712)
|.+|++.|+.|+|.|..+ ..|||||.||+|.||-.+
T Consensus 203 l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 203 LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred hhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 899999999999999654 689999999999999765
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-17 Score=181.98 Aligned_cols=134 Identities=16% Similarity=0.288 Sum_probs=111.2
Q ss_pred eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcc-cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 564 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRD-IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
+.+|.+.|.+++|+|+ +++|||||.|++|+|||+.+....... ........+|...|.+|+|+|....+|+||+.||+
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dgt 149 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSF 149 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCe
Confidence 4579999999999996 789999999999999999753211010 11123456799999999999964456789999999
Q ss_pred EEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+|||+++++.+..+. |...|.+++|+| +|.+|++++.|++|+|||++++..+.++
T Consensus 150 IrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 150 VNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred EEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 9999999999888876 678899999998 9999999999999999999999887654
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=172.99 Aligned_cols=171 Identities=19% Similarity=0.280 Sum_probs=141.4
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
-.|.||++.|..+.+ .+.++...+.+....+||..+|.. ++|...|..+.|+ ..+++|++.|.+|.+||+
T Consensus 231 ~~L~GHtGSVLCLqy----d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm 304 (499)
T KOG0281|consen 231 KILTGHTGSVLCLQY----DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDM 304 (499)
T ss_pred HhhhcCCCcEEeeec----cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEec
Confidence 367899999988777 333444444444445599998874 5799999999996 469999999999999999
Q ss_pred CCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 598 DAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
.+. .++....+..+|.+.|+.|.|+. .+++|++.|.+|++||+.++.+++++.+|...|-|+.+. +.+++
T Consensus 305 ~sp----s~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvV 374 (499)
T KOG0281|consen 305 ASP----TDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVV 374 (499)
T ss_pred cCc----hHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhcc---CeEEE
Confidence 763 34444556679999999999974 599999999999999999999999999999999999985 79999
Q ss_pred EEECCCcEEEEeCCCCcEEEEEeceeeccCce
Q 005147 678 SGSDDGSVKLWSINQAILLLHLVDVSFETKRT 709 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~~~ 709 (712)
|||.|.+|++||+..|.++ ..+++|.+..++
T Consensus 375 SGSSDntIRlwdi~~G~cL-RvLeGHEeLvRc 405 (499)
T KOG0281|consen 375 SGSSDNTIRLWDIECGACL-RVLEGHEELVRC 405 (499)
T ss_pred ecCCCceEEEEeccccHHH-HHHhchHHhhhh
Confidence 9999999999999999988 567777666554
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-18 Score=181.87 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=154.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 556 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 556 (712)
..+||...|-|.....+|..++.++.+++ ..+.....||+..+.++.. +-.....+...+.|....+
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~-~~~~asffvsvS~D~tlK~ 438 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAG-SKLGASFFVSVSQDCTLKL 438 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeee-cccCccEEEEecCCceEEE
Confidence 57788888887775556644444333322 1233445699988887776 3222222233333333333
Q ss_pred EEccC-------Cc------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEE
Q 005147 557 ADLNQ-------GD------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 623 (712)
Q Consensus 557 ~dl~~-------~~------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v 623 (712)
|++.. .. ...|...|+|++.+|...+|||||.|++.|||++.. .....+..+|+..|.||
T Consensus 439 W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-------~~l~~vLsGH~RGvw~V 511 (775)
T KOG0319|consen 439 WDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-------LRLLGVLSGHTRGVWCV 511 (775)
T ss_pred ecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC-------ceEEEEeeCCccceEEE
Confidence 55543 11 124899999999999999999999999999999962 12335678999999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 624 ~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|+|. ...+||+|.|++|+||.+.+..|+++|+||+..|..+.|-. ++..|+||+.||-+|||+++++.|+.++-
T Consensus 512 ~Fs~~-dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~-~~~qliS~~adGliKlWnikt~eC~~tlD 586 (775)
T KOG0319|consen 512 SFSKN-DQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIR-NGKQLISAGADGLIKLWNIKTNECEMTLD 586 (775)
T ss_pred Eeccc-cceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeee-CCcEEEeccCCCcEEEEeccchhhhhhhh
Confidence 99995 78999999999999999999999999999999999999995 99999999999999999999999997654
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-18 Score=165.28 Aligned_cols=208 Identities=17% Similarity=0.270 Sum_probs=156.2
Q ss_pred HHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCC-------------------------CCCce-eeccCCC
Q 005147 476 KLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS-------------------------SINNL-GSKEGYS 529 (712)
Q Consensus 476 ~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------------------~~~~~-~l~gh~~ 529 (712)
+.|.+|+. .|++-+++..|||||.-.+.++-+-+ .-|.+ +|-.|.+
T Consensus 102 ~yEt~ylt--------~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d 173 (430)
T KOG0640|consen 102 EYETKYLT--------SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD 173 (430)
T ss_pred ccceEEEe--------ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC
Confidence 44666653 57778899999999985443321111 11443 5678999
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEE-EEccC------CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ------GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~------~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
+|..++| .|. ..+.+....+..++ +|... .+.+....+|.+|+|+|.|++++.|....++++||+++.++
T Consensus 174 evn~l~F-HPr--e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc 250 (430)
T KOG0640|consen 174 EVNDLDF-HPR--ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC 250 (430)
T ss_pred cccceee-cch--hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeE
Confidence 9998888 332 22222222222222 55432 23445688999999999999999999999999999988544
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCC-CcEEEEEEecCCCCEEEEEE
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHE-RRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~-~~v~sv~fsp~~~~~l~sgs 680 (712)
-... ....+|+..|++|.+++ ++++.+||+.||.|+|||--+++|+.++. +|. ..|.+..|. .++.+++|.+
T Consensus 251 fvsa----nPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ft-kn~kyiLsSG 324 (430)
T KOG0640|consen 251 FVSA----NPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFT-KNGKYILSSG 324 (430)
T ss_pred eeec----CcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEc-cCCeEEeecC
Confidence 2221 13457899999999999 69999999999999999999999999985 565 478999999 5999999999
Q ss_pred CCCcEEEEeCCCCcEEEEEe
Q 005147 681 DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|..|++|.+.++.++..+.
T Consensus 325 ~DS~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 325 KDSTVKLWEISTGRMLKEYT 344 (430)
T ss_pred CcceeeeeeecCCceEEEEe
Confidence 99999999999999998765
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-18 Score=169.87 Aligned_cols=181 Identities=17% Similarity=0.211 Sum_probs=130.7
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
..|.||+.-|.++++. .+-++.++|+ +-|+|+.-+...+ +-+..+..++.|++.|++|+|++++||||||.+||
T Consensus 78 s~H~hIi~tY~vaFqt---~d~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNi 152 (378)
T KOG1345|consen 78 SPHQHIIDTYEVAFQT---SDAYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENI 152 (378)
T ss_pred ccchhhhHHHHHHhhc---CceEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceE
Confidence 4578899988877732 2355666777 6899999885544 88999999999999999999999999999999999
Q ss_pred eec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 114 VMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 114 ll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||- ....||+||||..+..|.-...
T Consensus 153 Lif~~df~rvKlcDFG~t~k~g~tV~~----------------------------------------------------- 179 (378)
T KOG1345|consen 153 LIFDADFYRVKLCDFGLTRKVGTTVKY----------------------------------------------------- 179 (378)
T ss_pred EEecCCccEEEeeecccccccCceehh-----------------------------------------------------
Confidence 996 3457999999988554332000
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---C--CCCccchHHHHHHHHHhh
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---P--VSCASDIYRLGVLLFELF 266 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~--~~~~sDIwSlGvll~eLl 266 (712)
.-.+..|.+||++... . ..+.+|||.||+++|.++
T Consensus 180 ----------------------------------------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cl 219 (378)
T KOG1345|consen 180 ----------------------------------------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCL 219 (378)
T ss_pred ----------------------------------------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeee
Confidence 1235678999977432 2 688999999999999999
Q ss_pred CCCCCChhh-------HH--HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 267 CPFSTGEEK-------TR--TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~pf~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++.+++... .. .+..-.....|..+....+....+.++-|.++|++|
T Consensus 220 tG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 220 TGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred cCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 954444311 11 111112223444555555666688889999999988
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-17 Score=168.93 Aligned_cols=169 Identities=18% Similarity=0.378 Sum_probs=137.8
Q ss_pred CccceecccCCCCCCcEEEEEcCCcEEE-EEccCC---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc-
Q 005147 529 SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE- 603 (712)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~- 603 (712)
..+.+++| +.+|...++...++.++ |+...+ .+-.|.++|.++.|+.+|.+|+++|.|+++-+||.-++...
T Consensus 236 kdVT~L~W---n~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 236 KDVTSLDW---NNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQ 312 (524)
T ss_pred CCcceEEe---cCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEE
Confidence 35688999 66777666666666655 877532 24469999999999999999999999999999999652100
Q ss_pred -----------------------Cc---------ccccc-eEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 005147 604 -----------------------NR---------DIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS 650 (712)
Q Consensus 604 -----------------------~~---------~~~~~-~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~ 650 (712)
.. ....| .+..+|..+|+++.|+| .+.+|+|+|+|++++||....+
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~ 391 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQS 391 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecCCC
Confidence 00 00112 34567999999999999 6999999999999999999999
Q ss_pred cEEEEeccCCCcEEEEEEecCC--------CCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 651 QVLTEMREHERRVWSIDFSSAD--------PTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 651 ~~~~~~~~H~~~v~sv~fsp~~--------~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
.++..+.+|++.|.++.|+|.+ +..+++++.|++|++||+..|.++..+..
T Consensus 392 ~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k 450 (524)
T KOG0273|consen 392 NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK 450 (524)
T ss_pred cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc
Confidence 9999999999999999999843 46999999999999999999999988643
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.9e-18 Score=173.81 Aligned_cols=213 Identities=17% Similarity=0.212 Sum_probs=145.3
Q ss_pred Ccceeee-ccceeeccCCCCCccccccccccccc------------------------ccCceEEEEeeCCccHHHhhcC
Q 005147 20 DFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPFVHAIEWGDVSLRQWLDK 74 (712)
Q Consensus 20 ~~~~r~~-~~~~~l~~~~H~ni~~~~~~~~~~~~------------------------~~~~~~l~~e~~g~sL~~~l~~ 74 (712)
..-||.. ++.++| ..|||||.++.. |.++. ....+|++|.-...+|+++|..
T Consensus 259 ~~t~R~l~nqtvhL--a~HPNIvri~~a-F~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~ 335 (598)
T KOG4158|consen 259 MGTFRPLPNQTVHL--AKHPNIVRIQTA-FIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT 335 (598)
T ss_pred cceeeeCCCCCccc--CCCCCEEeehhh-hhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc
Confidence 3445554 333333 479999998884 43332 1126788888888999999955
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec--CCC--cEEEEecccccCCCCCCcccccccccccccC
Q 005147 75 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKD 150 (712)
Q Consensus 75 ~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~--~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 150 (712)
.. .+.....-|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||.|--...
T Consensus 336 ~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~---------------- 397 (598)
T KOG4158|consen 336 RH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN---------------- 397 (598)
T ss_pred CC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccc----------------
Confidence 54 57778889999999999999999999999999999996 333 468899998721100
Q ss_pred CCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccc
Q 005147 151 LSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQI 230 (712)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 230 (712)
++...++. ..-.|
T Consensus 398 ------------------------------------------hGlqlpy~-----S~~Vd-------------------- 410 (598)
T KOG4158|consen 398 ------------------------------------------HGLQLPYE-----SDEVD-------------------- 410 (598)
T ss_pred ------------------------------------------cccccccc-----ccccc--------------------
Confidence 00000000 00011
Q ss_pred ccccCccccCcccccCCC------CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHH
Q 005147 231 LLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASF 301 (712)
Q Consensus 231 ~~~gt~~Y~aPE~~~~~~------~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (712)
.-|....||||+....+ --.++|.|+.|.+.||+++ ||....+.........+..+|.-.....|...++
T Consensus 411 -~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 411 -LGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQL 489 (598)
T ss_pred -CCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHH
Confidence 33677789999986544 1348999999999999999 8887433222222344445555444455666699
Q ss_pred HHHcCCCCCCCCCCH---HHHhc
Q 005147 302 CLWLLHPEPSGRPKM---GELLQ 321 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~---~eiL~ 321 (712)
+..+|+.||++|++. ..+|+
T Consensus 490 V~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHhcCCccccCCccHHHhHHH
Confidence 999999999999974 44554
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-17 Score=162.18 Aligned_cols=176 Identities=16% Similarity=0.196 Sum_probs=144.4
Q ss_pred CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc-----CCceecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 518 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN-----QGDLLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 518 ~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~-----~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
..|++.+.||.++++...| +| +|.+.+..+.+..+. |..- ...+.+|+++|..+.|.+|++.++++|.|++
T Consensus 37 ~ap~m~l~gh~geI~~~~F-~P--~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKF-HP--DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT 113 (338)
T ss_pred cchhhhcCCCcceEEEEEE-CC--CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence 4688999999999999999 55 777777776666655 8753 2345589999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
|+.||.+++.+ ......|.+-|++++-+.....++.||+.||+++|||+|+..++++++ ..-.+++|.|. .
T Consensus 114 v~~wD~~tG~~-------~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~-d 184 (338)
T KOG0265|consen 114 VRGWDAETGKR-------IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFK-D 184 (338)
T ss_pred EEEEeccccee-------eehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEec-c
Confidence 99999987533 334457788888887554445688899999999999999999999886 46789999999 5
Q ss_pred CCCEEEEEECCCcEEEEeCCCCcEEEEEeceeecc
Q 005147 672 DPTLLASGSDDGSVKLWSINQAILLLHLVDVSFET 706 (712)
Q Consensus 672 ~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~ 706 (712)
.+.-+.||+-|+.|++||++.+..+ .++.+|.++
T Consensus 185 ~s~qv~sggIdn~ikvWd~r~~d~~-~~lsGh~Dt 218 (338)
T KOG0265|consen 185 TSDQVISGGIDNDIKVWDLRKNDGL-YTLSGHADT 218 (338)
T ss_pred cccceeeccccCceeeeccccCcce-EEeecccCc
Confidence 8899999999999999999987766 455566554
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-17 Score=177.67 Aligned_cols=188 Identities=18% Similarity=0.251 Sum_probs=155.5
Q ss_pred CcccccccCCCCCCCCccccCC---------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce
Q 005147 495 PLVRHSQLSSDGRTSKPLVNER---------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~ 564 (712)
..+..+.|++-|.++++....- +..-.+...||+..+..++. +.||.+.++..++++|+ |+...|-|
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~Y---SpDgq~iaTG~eDgKVKvWn~~SgfC 384 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAY---SPDGQLIATGAEDGKVKVWNTQSGFC 384 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEE---CCCCcEEEeccCCCcEEEEeccCceE
Confidence 3456688888898876665541 12234566799999999888 88999999999999988 99998765
Q ss_pred e----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 565 L----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 565 ~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+ .|++.|+.+.|+..|+.+++++.||+|+.||+....+ .........-..+||+..| .+.++.+|+.|.
T Consensus 385 ~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN------fRTft~P~p~QfscvavD~-sGelV~AG~~d~ 457 (893)
T KOG0291|consen 385 FVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN------FRTFTSPEPIQFSCVAVDP-SGELVCAGAQDS 457 (893)
T ss_pred EEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce------eeeecCCCceeeeEEEEcC-CCCEEEeeccce
Confidence 5 6999999999999999999999999999999965221 1112233445578999998 588888888876
Q ss_pred -cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 641 -VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 641 -~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.|.+|++.+|+.+-.+.||+++|.+++|+| +++.|||||.|.+|++||+=..
T Consensus 458 F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 458 FEIFVWSVQTGQLLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred EEEEEEEeecCeeeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeecc
Confidence 599999999999999999999999999998 9999999999999999997543
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=156.64 Aligned_cols=194 Identities=17% Similarity=0.177 Sum_probs=154.0
Q ss_pred CCCCCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.+.|+-.|+.++|+.|..++-.. +..+...|..+..||++.+..+-|+ ..|..+...+++.+..+||.+
T Consensus 96 sf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc--~eD~~iLSSadd~tVRLWD~r 173 (334)
T KOG0278|consen 96 SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWC--HEDKCILSSADDKTVRLWDHR 173 (334)
T ss_pred hhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEe--ccCceEEeeccCCceEEEEec
Confidence 45677788999999988765222 3445567888999999999999994 344444444444444449999
Q ss_pred CCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 561 QGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 561 ~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+++..+ -...|++++.+++|++|.+ ...+.|+.||..+. .++....-...|.+.+.+|. +..+++|+
T Consensus 174 Tgt~v~sL~~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf--------~~lKs~k~P~nV~SASL~P~-k~~fVaGg 243 (334)
T KOG0278|consen 174 TGTEVQSLEFNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSF--------GLLKSYKMPCNVESASLHPK-KEFFVAGG 243 (334)
T ss_pred cCcEEEEEecCCCCcceeeccCCCEEEE-ecCceeEEeccccc--------cceeeccCccccccccccCC-CceEEecC
Confidence 998664 4889999999999988776 45678999999762 22333344557888999994 79999999
Q ss_pred CCCcEEEEECCCCcEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 638 FEGVVQVWDVSRSQVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.|+.+.-||..+|..+-.+ .+|-++|.||.|+| +|...|+||.||+|+||-+.-++..
T Consensus 244 ed~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP-dGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 244 EDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP-DGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred cceEEEEEeccCCceeeecccCCCCceEEEEECC-CCceeeccCCCceEEEEEecCCCch
Confidence 9999999999999988886 89999999999999 9999999999999999998765543
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=176.40 Aligned_cols=157 Identities=14% Similarity=0.236 Sum_probs=134.1
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+.++.|..+.+.+++++..+... ..|.+.|.+|+.+|...+++|+|+|-+||+||... .+.+..+..+|
T Consensus 71 v~GsDD~~IrVfnynt~ekV~~F-----eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~------~wa~~qtfeGH 139 (794)
T KOG0276|consen 71 VTGSDDMQIRVFNYNTGEKVKTF-----EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN------EWACEQTFEGH 139 (794)
T ss_pred EEecCCceEEEEecccceeeEEe-----eccccceeeeeecCCCCeEEecCCccEEEEeeccC------ceeeeeEEcCc
Confidence 45667777777777776654433 35999999999999999999999999999999963 34556677899
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC-CCCEEEEEECCCcEEEEeCCCCcE
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA-DPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~-~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
..-|.+|+|+|.|.+.|||++-|++|++|.+.+..+..++++|++.|+||+|-|. |..+|+||++|.+|+|||..+..|
T Consensus 140 ~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C 219 (794)
T KOG0276|consen 140 EHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC 219 (794)
T ss_pred ceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH
Confidence 9999999999999999999999999999999999999999999999999999862 225999999999999999999888
Q ss_pred EEEEeceeec
Q 005147 696 LLHLVDVSFE 705 (712)
Q Consensus 696 v~~~~~~~~~ 705 (712)
+. .+++|..
T Consensus 220 V~-TLeGHt~ 228 (794)
T KOG0276|consen 220 VQ-TLEGHTN 228 (794)
T ss_pred HH-Hhhcccc
Confidence 84 4555533
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=189.76 Aligned_cols=191 Identities=17% Similarity=0.270 Sum_probs=146.7
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC----------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS----------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~----------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
..|...++++.|++||..+++...+.. ..|...+.+| ..+..+.| ++.....+...+.+...
T Consensus 480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~-~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASR-SKLSGICW-NSYIKSQVASSNFEGVV 557 (793)
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEeccc-CceeeEEe-ccCCCCEEEEEeCCCeE
Confidence 347778999999999986543322211 1133344443 46778888 55445555555555555
Q ss_pred EEEEccCCce----ecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 555 VKADLNQGDL----LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 555 v~~dl~~~~~----~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
.+||+.++.. .+|.+.|.+++|+| ++.+|+|||.|++|++||+++.. .+....+...|.+++|++.+
T Consensus 558 ~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~--------~~~~~~~~~~v~~v~~~~~~ 629 (793)
T PLN00181 558 QVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV--------SIGTIKTKANICCVQFPSES 629 (793)
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--------EEEEEecCCCeEEEEEeCCC
Confidence 5599987653 36999999999997 78999999999999999997531 22233345689999998777
Q ss_pred CCEEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 630 KSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 630 ~~~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+.+|++|+.||.|++||++++. ++.++.+|...|++++|. ++.+|++||.|++|+|||++.+
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~--~~~~lvs~s~D~~ikiWd~~~~ 692 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLVSSSTDNTLKLWDLSMS 692 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe--CCCEEEEEECCCEEEEEeCCCC
Confidence 9999999999999999999875 678889999999999997 5889999999999999999853
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-18 Score=168.38 Aligned_cols=157 Identities=17% Similarity=0.282 Sum_probs=135.3
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-------eecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-------LLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-------~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.|.-++.+|..+|.++.+ .+|.+...+-+....+|++.+.. +.||...|+.+.|+ ..+|++|+.|.+
T Consensus 268 e~l~tlihHceaVLhlrf----~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRT 341 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRF----SNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRT 341 (499)
T ss_pred chhhHHhhhcceeEEEEE----eCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCce
Confidence 356688899999988877 67787777777777779998643 55899999999996 459999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
||+|++.+. +...+..+|+..|.|+.+. +.++++|+.|.+|+|||+..|.+++.+++|+.-|.||.|+
T Consensus 342 ikvW~~st~-------efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd-- 409 (499)
T KOG0281|consen 342 IKVWSTSTC-------EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-- 409 (499)
T ss_pred EEEEeccce-------eeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--
Confidence 999999662 4444567899999999875 6899999999999999999999999999999999999996
Q ss_pred CCCEEEEEECCCcEEEEeCCCCc
Q 005147 672 DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 672 ~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
...++||+.||+|++||+..+.
T Consensus 410 -~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 410 -NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred -CceeeeccccceEEEEeccccc
Confidence 5889999999999999998754
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-16 Score=152.86 Aligned_cols=162 Identities=14% Similarity=0.252 Sum_probs=132.6
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccCCc---ee-----cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQGD---LL-----NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~~~---~~-----~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
...+.||.+.+..++| +|-. |.+......+.. .+|+...++ +. +|...|.+++|+|.|++||+||.|.+
T Consensus 7 ~~~~~gh~~r~W~~aw-hp~~-g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAW-HPGK-GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred EEeecCCCCcEEEEEe-ccCC-ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 4567899999999999 4443 443333333333 448887422 22 58999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~f 668 (712)
+-||.-.. ....+....-+|...|-||+|++ ++++|||++.|..|-||.+..+ .++..+++|+..|-.|.|
T Consensus 85 ~~Iw~k~~-----~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 85 VVIWKKED-----GEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred EEEeecCC-----CceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 99998653 33445556779999999999999 6999999999999999999854 588899999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCC
Q 005147 669 SSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|| ...+|+|+|.|.+|++|.-.
T Consensus 159 HP-t~dlL~S~SYDnTIk~~~~~ 180 (312)
T KOG0645|consen 159 HP-TEDLLFSCSYDNTIKVYRDE 180 (312)
T ss_pred cC-CcceeEEeccCCeEEEEeec
Confidence 98 78999999999999999766
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-17 Score=178.53 Aligned_cols=153 Identities=18% Similarity=0.297 Sum_probs=133.1
Q ss_pred CCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcc
Q 005147 527 GYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII 601 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~ 601 (712)
.++.+.+++| .|...- .+++...+.+. ||-+=++++ .|.++|..|.|+|++.+|++||+|-+||||.+.+
T Consensus 8 kSsRvKglsF-HP~rPw--ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~-- 82 (1202)
T KOG0292|consen 8 KSSRVKGLSF-HPKRPW--ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-- 82 (1202)
T ss_pred ccccccceec-CCCCCE--EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc--
Confidence 3445667777 555553 46666667766 888877655 6999999999999999999999999999999965
Q ss_pred ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC
Q 005147 602 NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
..+..+..+|-..|..+.||+ .-.+|+|+|.|.+|+||+..+++++..++||...|.|..|+| ...+++|+|.
T Consensus 83 -----rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp-tEDlIVSaSL 155 (1202)
T KOG0292|consen 83 -----RRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP-TEDLIVSASL 155 (1202)
T ss_pred -----ceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC-ccceEEEecc
Confidence 345677889999999999998 589999999999999999999999999999999999999998 7799999999
Q ss_pred CCcEEEEeCC
Q 005147 682 DGSVKLWSIN 691 (712)
Q Consensus 682 D~~v~lWd~~ 691 (712)
|.+|+|||+.
T Consensus 156 DQTVRVWDis 165 (1202)
T KOG0292|consen 156 DQTVRVWDIS 165 (1202)
T ss_pred cceEEEEeec
Confidence 9999999985
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=171.98 Aligned_cols=203 Identities=16% Similarity=0.297 Sum_probs=162.8
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecc-------cCCCCCCcEEEEEcCC-
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGW-------INPFLEGLCKYLSFSK- 552 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~-------~~~~~~~~~~~~~~~~- 552 (712)
...+|-.-.++...||||+..+.+..++ +.-..+++..|++.|.++.| ++.+.||++..|+...
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY 424 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY 424 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc
Confidence 3456777788999999999876654443 22356799999999998887 4456778877776443
Q ss_pred ---------------------------------cEE-EEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 553 ---------------------------------LRV-KADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 553 ---------------------------------~~v-~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
+.+ +|.+++|+++ ||.++|.+++|+|+++.||+||+|++||+
T Consensus 425 rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRi 504 (893)
T KOG0291|consen 425 RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRI 504 (893)
T ss_pred ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEE
Confidence 222 4888998865 89999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe------------------
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM------------------ 656 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~------------------ 656 (712)
||+-. ....+....+.+.+..++|+| ++..||.+.-||.|.+||+..+..+.++
T Consensus 505 W~if~-------s~~~vEtl~i~sdvl~vsfrP-dG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta 576 (893)
T KOG0291|consen 505 WDIFS-------SSGTVETLEIRSDVLAVSFRP-DGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITA 576 (893)
T ss_pred EEeec-------cCceeeeEeeccceeEEEEcC-CCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeeh
Confidence 99843 233566777889999999999 6999999999999999999865443222
Q ss_pred --ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 657 --REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 657 --~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+-.+..+++++++ ||..+++|+....|+|+|+.++..+..+-
T Consensus 577 ~~sa~~K~Ftti~ySa-DG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 577 ENSAKGKTFTTICYSA-DGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred hhcccCCceEEEEEcC-CCCEEEecCCcccEEEEECchhheeeeEE
Confidence 12346789999996 99999999999999999999988877653
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-17 Score=162.19 Aligned_cols=169 Identities=23% Similarity=0.284 Sum_probs=144.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC-----CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ-----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~-----~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.-.|+||++.+..+.+ ...|...+....+..+ +|++.+ ..+.+|...|.++.|-|.|+++++++.|.+|+.
T Consensus 143 e~~LrGHt~sv~di~~---~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~ 219 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISF---DASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA 219 (406)
T ss_pred hhhhhccccceeEEEE---ecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence 4468999999999988 4445555555555544 499875 235689999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC---
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA--- 671 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~--- 671 (712)
||+.++ .+..+..+|...|..|+.+. |+.++|+++.|.+|++|-+.+++|...+.+|+-+|-+++|.|.
T Consensus 220 We~~tg-------~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~ 291 (406)
T KOG0295|consen 220 WECDTG-------YCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSY 291 (406)
T ss_pred Eecccc-------eeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccC
Confidence 999773 34456678888999999997 7999999999999999999999999999999999999999982
Q ss_pred -----------CCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 672 -----------DPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 672 -----------~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++++++||.|++|++||+.+|.++.++.
T Consensus 292 ~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ 331 (406)
T KOG0295|consen 292 PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV 331 (406)
T ss_pred cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe
Confidence 13699999999999999999999998876
|
|
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-16 Score=162.31 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=122.7
Q ss_pred ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 563 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 563 ~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
.+.||.++|.++.|+| +.+.||+||.|.+|+||++.............+...+|...|.-|.|||--.+.|+|++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 3458999999999999 567999999999999999986544444444456677999999999999988899999999999
Q ss_pred EEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceeec
Q 005147 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSFE 705 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~ 705 (712)
|.||++.+|..+-++. |.+-|++++|+ .||++|+|.+.|.+|+|||.++++.+..- .+|..
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn-~dGs~l~TtckDKkvRv~dpr~~~~v~e~-~~heG 216 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFN-RDGSLLCTTCKDKKVRVIDPRRGTVVSEG-VAHEG 216 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEec-cCCceeeeecccceeEEEcCCCCcEeeec-ccccC
Confidence 9999999999998988 99999999999 59999999999999999999999998776 44433
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=164.37 Aligned_cols=192 Identities=21% Similarity=0.210 Sum_probs=147.6
Q ss_pred cccccccCCCCCCCCccccCCC-----CCC---ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc---
Q 005147 496 LVRHSQLSSDGRTSKPLVNERS-----SIN---NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD--- 563 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~-----~~~---~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~--- 563 (712)
-|.++.|=.||+-++.+..+.- ..+ .-.+.+|+.++.-..| + -.++++.+...|+..+. ||+.+..
T Consensus 70 ~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f-~-~~d~t~l~s~sDd~v~k~~d~s~a~v~~ 147 (487)
T KOG0310|consen 70 VVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKF-S-PQDNTMLVSGSDDKVVKYWDLSTAYVQA 147 (487)
T ss_pred ceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEe-c-ccCCeEEEecCCCceEEEEEcCCcEEEE
Confidence 3556667677776654433321 222 1246699999987777 3 35556555555555544 8887654
Q ss_pred -eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 564 -LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 564 -~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
+.+|++.|.|.+|+|- +.+++|||.||+|++||+++. ...+.++.|..+|.+|.+-| .+..||+++. ..
T Consensus 148 ~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~-------~~~v~elnhg~pVe~vl~lp-sgs~iasAgG-n~ 218 (487)
T KOG0310|consen 148 ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSL-------TSRVVELNHGCPVESVLALP-SGSLIASAGG-NS 218 (487)
T ss_pred EecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccC-------CceeEEecCCCceeeEEEcC-CCCEEEEcCC-Ce
Confidence 4589999999999994 559999999999999999861 15678999999999999999 5789998885 46
Q ss_pred EEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|++||+-+| +.+..+..|.+.|+|+++.. +++.|+|||.|+.|++||+.+.+.+...
T Consensus 219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~t~~Kvv~s~ 276 (487)
T KOG0310|consen 219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDTTNYKVVHSW 276 (487)
T ss_pred EEEEEecCCceehhhhhcccceEEEEEeec-CCceEeecccccceEEEEccceEEEEee
Confidence 999999976 45555555999999999995 8999999999999999998887776553
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-17 Score=164.71 Aligned_cols=166 Identities=26% Similarity=0.301 Sum_probs=123.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++|+|++.+++ .+.. ...+++++++ .+++|.+++......+++..+..++.|++.++.+||++|++|+
T Consensus 47 e~~~~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 122 (225)
T smart00221 47 EIRILKKLKHPNIVKLYG-VFED---PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHR 122 (225)
T ss_pred HHHHHHhCCCCChhhhee-eeec---CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 334567779999999887 3322 2345666666 5679999995443227899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++..+.++++|||.+........ +
T Consensus 123 di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--------------------------------~---------------- 154 (225)
T smart00221 123 DLKPENILLGMDGLVKLADFGLARFIHRDLA--------------------------------A---------------- 154 (225)
T ss_pred CCCHHHEEEcCCCCEEEeeCceeeEecCccc--------------------------------c----------------
Confidence 9999999999999999999998743321100 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|++||.+ ....++.++|+|+||+++++|
T Consensus 155 -----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l 193 (225)
T smart00221 155 -----------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYEL 193 (225)
T ss_pred -----------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHH
Confidence 00013567889999998 556688899999999999999
Q ss_pred hC---CCCC-ChhhHHHHHhhcccC
Q 005147 266 FC---PFST-GEEKTRTMSSLRHRV 286 (712)
Q Consensus 266 l~---pf~~-~~~~~~~~~~~~~~~ 286 (712)
++ ||.. .+.....+..+..+.
T Consensus 194 ~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 194 LWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHCCCCccccchhHHHHHHHHhcCC
Confidence 98 6655 344444555555443
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=170.76 Aligned_cols=188 Identities=16% Similarity=0.302 Sum_probs=149.0
Q ss_pred CCcccccccCCCCCCCCccccCC--------CCCCceeecc-CCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKE-GYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD- 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~g-h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~- 563 (712)
...|+++.|+++|..++++-... .....-.+.+ |.+.+..++| + ...+.....+...+.+|++...
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW-~---~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAW-N---SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEec-c---CceEEEecCCCcEEEEEEecchh
Confidence 56799999999999886553221 1222334566 9999999999 2 4444444444444448887543
Q ss_pred ----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe--
Q 005147 564 ----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 637 (712)
Q Consensus 564 ----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-- 637 (712)
+.+|...|+.+.|++|+.+||+||.|+.+.|||... ...+.....|.+.|-.++|+|....+||+|+
T Consensus 293 ~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~-------~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs 365 (484)
T KOG0305|consen 293 VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS-------PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGS 365 (484)
T ss_pred hhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC-------ccccEEEeccceeeeEeeeCCCccCceEEcCCC
Confidence 457999999999999999999999999999999843 3455677889999999999999999999986
Q ss_pred CCCcEEEEECCCCcE-------------------------------------------EEEeccCCCcEEEEEEecCCCC
Q 005147 638 FEGVVQVWDVSRSQV-------------------------------------------LTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~-------------------------------------------~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
.|++|++||+.+++. +..+.+|+.+|..++++| ||.
T Consensus 366 ~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SP-dg~ 444 (484)
T KOG0305|consen 366 ADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSP-DGE 444 (484)
T ss_pred cccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECC-CCC
Confidence 699999999987642 224579999999999998 999
Q ss_pred EEEEEECCCcEEEEeCCCC
Q 005147 675 LLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~ 693 (712)
.+++|+.|.++++|++=..
T Consensus 445 ~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEEecccCcEEeccccCC
Confidence 9999999999999998653
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=171.00 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=132.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------eecCCCCeeEEEE-cCCCCEEEEEeCCCcEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSF-DRDGELFAAAGVNKKIK 593 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f-~~~~~~lat~~~d~~I~ 593 (712)
...++-|++.|..+.. .+... .+..++.++..++|+...+. +..|.+.|.|+++ .++.+++|+||.|+.|.
T Consensus 66 ~asme~HsDWVNDiiL-~~~~~-tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~If 143 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIIL-CGNGK-TLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIF 143 (735)
T ss_pred hhhhhhhHhHHhhHHh-hcCCC-ceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEE
Confidence 3455556655544433 11111 33333333333346555431 3359999999999 78889999999999999
Q ss_pred EEEcCCccc--cCcccccce-EE-ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 594 VFECDAIIN--ENRDIHYPV-VE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 594 iwD~~~~~~--~~~~~~~~~-~~-~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
|||++++.. .+.....++ .. .+++..|++++.++ ++..|++|+.++.+++||.++++.+..+.+|+..|..+-.+
T Consensus 144 lWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~ 222 (735)
T KOG0308|consen 144 LWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVN 222 (735)
T ss_pred EEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceEEEecCcccceEEeccccccceeeeeccccceEEEEEc
Confidence 999997522 111111111 12 27889999999998 68999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+ ||..++|||.||+|++||+++..|+.++.
T Consensus 223 d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 223 D-DGTRLLSASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred C-CCCeEeecCCCceEEeeeccccceeeeEE
Confidence 6 99999999999999999999999998854
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.2e-17 Score=178.00 Aligned_cols=128 Identities=23% Similarity=0.457 Sum_probs=108.6
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC----------------------------ccc-----------cCc-
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN-----------ENR- 605 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~----------------------------~~~-----------~~~- 605 (712)
.|.+.|+++.|++||.|||+||.|+.|+||.+.. ... ...
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 6999999999999999999999999999998754 000 000
Q ss_pred --ccc----------cc-eEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 606 --DIH----------YP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 606 --~~~----------~~-~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
... .| ....+|.+.|..|+|+. .++|+|++.|.||+||++....|+++|. |.+-|+||+|+|.|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVD 421 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccC
Confidence 000 11 12358999999999996 7899999999999999999999999998 99999999999999
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEE
Q 005147 673 PTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.++|+|||.||+|+||++...+.+
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~Vv 445 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKKVV 445 (712)
T ss_pred CCcEeecccccceEEeecCcCeeE
Confidence 999999999999999999865544
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.6e-16 Score=145.10 Aligned_cols=200 Identities=16% Similarity=0.163 Sum_probs=154.3
Q ss_pred CCCCcccccccCCCCCCCCccccCCC-------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EE-
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNERS-------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VK- 556 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~- 556 (712)
-|+....|.+|||+|+.++..++++- ..+.+++.-|.+.+..+.|+.+...+-..+.+...+. .+
T Consensus 87 hhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy 166 (350)
T KOG0641|consen 87 HHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIY 166 (350)
T ss_pred ccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEE
Confidence 46778899999999998877665542 3577888889999999999988777665555544433 22
Q ss_pred -EEccCCc----eecCCCCeeEE-EEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 557 -ADLNQGD----LLNSSNLVCSL-SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 557 -~dl~~~~----~~~h~~~V~~i-~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
-|...|. +.+|.+.|.++ +| .+-+|++|+.|++|+.||++...+.........-.--..+.|.+|+..| .+
T Consensus 167 ~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp-sg 243 (350)
T KOG0641|consen 167 ITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP-SG 243 (350)
T ss_pred EeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC-Cc
Confidence 3444443 45799999886 45 6889999999999999999853221111000000011247799999999 69
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.+|++|-.|....+||+|-+..++.|.-|+..|.||.|+| ...++.+||.|.+|++=|+. |...
T Consensus 244 rll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp-~a~yllt~syd~~ikltdlq-gdla 307 (350)
T KOG0641|consen 244 RLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQ-GDLA 307 (350)
T ss_pred ceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCC-CceEEEEecccceEEEeecc-cchh
Confidence 9999999999999999999999999999999999999998 88999999999999999986 4443
|
|
| >KOG0269 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.2e-17 Score=175.46 Aligned_cols=154 Identities=16% Similarity=0.311 Sum_probs=130.4
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccC---Cc----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQ---GD----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~---~~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
..+.| +.+.+++++.++-++-.++||+.- .. +..|...|.++.|++ ..++|++||.||+||+||++.-
T Consensus 91 ~DVkW-~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~--- 166 (839)
T KOG0269|consen 91 ADVKW-GQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK--- 166 (839)
T ss_pred hhccc-ccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc---
Confidence 35677 677888888888777777899975 22 235999999999998 6789999999999999999861
Q ss_pred CcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECC
Q 005147 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (712)
Q Consensus 604 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D 682 (712)
+ ...+..+....|..|.|+|..++.|+++...|.+++||+|.. ++...+.+|.++|.|+.||| ++.+|||||.|
T Consensus 167 --~--S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRD 241 (839)
T KOG0269|consen 167 --K--SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHP-NREWLATGGRD 241 (839)
T ss_pred --c--ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecC-CCceeeecCCC
Confidence 1 122334466779999999999999999999999999999976 68889999999999999999 99999999999
Q ss_pred CcEEEEeCCCCc
Q 005147 683 GSVKLWSINQAI 694 (712)
Q Consensus 683 ~~v~lWd~~~~~ 694 (712)
+.|+|||..++.
T Consensus 242 K~vkiWd~t~~~ 253 (839)
T KOG0269|consen 242 KMVKIWDMTDSR 253 (839)
T ss_pred ccEEEEeccCCC
Confidence 999999998544
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-16 Score=164.51 Aligned_cols=208 Identities=17% Similarity=0.305 Sum_probs=156.3
Q ss_pred HHHHHHHhhccCCCCCCCCCcccccccCCCCCCC---------CccccCCCCCCceeeccCCCccc-eecccCCCCCCcE
Q 005147 476 KLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTS---------KPLVNERSSINNLGSKEGYSEGR-RSGWINPFLEGLC 545 (712)
Q Consensus 476 ~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~~~~~~l~gh~~~~~-~~~~~~~~~~~~~ 545 (712)
.|.+.|=..++.+.+.+|+.-|+.+.|+.+|+.. .++.+|.. ....+.|.+.+. .+.+ .|.. ..+
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG---~~~~~f~~~~~~~cvkf-~pd~-~n~ 314 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG---QVLSRFHLDKVPTCVKF-HPDN-QNI 314 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccc---eEEEEEecCCCceeeec-CCCC-CcE
Confidence 4566677777888899999999999999999853 22334432 123334444332 3334 3333 255
Q ss_pred EEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC----cccc-cc-----
Q 005147 546 KYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----RDIH-YP----- 610 (712)
Q Consensus 546 ~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~----~~~~-~~----- 610 (712)
.+...++.+++ ||+++++++ .|.+.|.+|.|-+++..|++++.|++++||+.+....-. ...+ +|
T Consensus 315 fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~ 394 (503)
T KOG0282|consen 315 FLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLH 394 (503)
T ss_pred EEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecC
Confidence 66667777777 999999877 489999999999999999999999999999998621000 0000 00
Q ss_pred -----------------------------eEEecCC--CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC
Q 005147 611 -----------------------------VVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659 (712)
Q Consensus 611 -----------------------------~~~~~~~--~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H 659 (712)
....+|. +.-..|.|+| ++.+|++|+.||.|.+||.++-+.+..+.+|
T Consensus 395 P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah 473 (503)
T KOG0282|consen 395 PNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAH 473 (503)
T ss_pred CCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhhhhhccccC
Confidence 0001222 2235689999 6999999999999999999999999999999
Q ss_pred CCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
+++|..++|+|...+.+||||.||.|++||
T Consensus 474 ~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 474 DQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999999999999999997
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-15 Score=149.99 Aligned_cols=171 Identities=19% Similarity=0.209 Sum_probs=131.8
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
..+++||+..+..+.+ ++..+-. ...+.+....+|...... ..-|..+|+.+..+|.|+||++++.|++....|
T Consensus 254 l~~~~Gh~kki~~v~~-~~~~~~v-~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd 331 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKF-HKDLDTV-ITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSD 331 (506)
T ss_pred hhhccCcceEEEEEEe-ccchhhe-eecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEE
Confidence 3578888877766655 3333322 222222222336554332 235899999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
++++.+ ...+......-.+++..||| |+.+|++|..||.|+|||+.++..+..|.+|+++|.+|+|+ .+|-+|
T Consensus 332 ~~~g~~-----lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~Fs-ENGY~L 404 (506)
T KOG0289|consen 332 ISSGSQ-----LTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFS-ENGYWL 404 (506)
T ss_pred ccCCcE-----EEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEec-cCceEE
Confidence 987422 11111113345689999999 69999999999999999999999999999999999999999 599999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++++|+.|++||+|..+.+.++.
T Consensus 405 at~add~~V~lwDLRKl~n~kt~~ 428 (506)
T KOG0289|consen 405 ATAADDGSVKLWDLRKLKNFKTIQ 428 (506)
T ss_pred EEEecCCeEEEEEehhhcccceee
Confidence 999999999999999888776664
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=159.54 Aligned_cols=215 Identities=14% Similarity=0.166 Sum_probs=164.2
Q ss_pred hhhhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCC------CCCcee----eccCCCccceecccCC
Q 005147 470 LMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS------SINNLG----SKEGYSEGRRSGWINP 539 (712)
Q Consensus 470 ~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~----l~gh~~~~~~~~~~~~ 539 (712)
+.+.+++++.+. .+-+|...++=+++||.|.+.+....... ...... ++--.+++..++|
T Consensus 42 ~ir~i~~~~~~~-------iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~W--- 111 (603)
T KOG0318|consen 42 IIRNIDNPASVD-------IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISW--- 111 (603)
T ss_pred EEEECCCcccee-------eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeeccccccccee---
Confidence 456677776632 46678778889999999998766654432 011122 2233467888999
Q ss_pred CCCCcEEEEEcCC-c---EEE-EEcc--CCceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccce
Q 005147 540 FLEGLCKYLSFSK-L---RVK-ADLN--QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (712)
Q Consensus 540 ~~~~~~~~~~~~~-~---~v~-~dl~--~~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~ 611 (712)
..|+.-.++-++. . .+. ||-- .|++.||+..|+++.|-|..- .++|||.|++|.+|+=.-. .-..
T Consensus 112 d~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF-------KFk~ 184 (603)
T KOG0318|consen 112 DFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF-------KFKS 184 (603)
T ss_pred CCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe-------eeee
Confidence 4454433333332 1 233 7664 377889999999999998654 7999999999999985321 1122
Q ss_pred EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec---cCCCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR---EHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 612 ~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~---~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
....|..-|.||.|+| ++..|||++.||+|.|||-.+|..+..+. +|.+.|..++|+| |++.|+|+|.|.++|||
T Consensus 185 s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIW 262 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIW 262 (603)
T ss_pred cccccccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEE
Confidence 3446788899999999 59999999999999999999999999998 8999999999999 99999999999999999
Q ss_pred eCCCCcEEEEEecee
Q 005147 689 SINQAILLLHLVDVS 703 (712)
Q Consensus 689 d~~~~~~v~~~~~~~ 703 (712)
|+.+.+++.++..+.
T Consensus 263 dVs~~slv~t~~~~~ 277 (603)
T KOG0318|consen 263 DVSTNSLVSTWPMGS 277 (603)
T ss_pred EeeccceEEEeecCC
Confidence 999999998887654
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-16 Score=149.25 Aligned_cols=149 Identities=14% Similarity=0.286 Sum_probs=117.5
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
+...|.++.+|...+|++...++ ...+.|+.++..|++.+||+|+ ...|++||+++. .........+|.
T Consensus 15 sA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~-----np~Pv~t~e~h~ 83 (311)
T KOG0315|consen 15 SAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSN-----NPNPVATFEGHT 83 (311)
T ss_pred eccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhcc-CCeeEEEEccCC-----CCCceeEEeccC
Confidence 33444444444444444433322 2378899999999999999987 478999999872 223334566888
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
..|++|.|.- ++.+++|||.||+|+|||+|...+-+.|. |..+|++|..+| +...|++|..+|.|++||++...+..
T Consensus 84 kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 84 KNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred CceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC-CcceEEeecCCCcEEEEEccCCcccc
Confidence 9999999996 79999999999999999999988877776 779999999998 88899999999999999999876655
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.++
T Consensus 161 ~li 163 (311)
T KOG0315|consen 161 ELI 163 (311)
T ss_pred ccC
Confidence 443
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.8e-16 Score=170.92 Aligned_cols=171 Identities=15% Similarity=0.257 Sum_probs=143.6
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---cCCCCeeEEEEcC-CCCEEEEEeCCCcE
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDR-DGELFAAAGVNKKI 592 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~-~~~~lat~~~d~~I 592 (712)
+..|...++||.++|..++| +..+++..++-|+...+|.+...+++ .|.+.|+||+|+| |.++|++|+-|++|
T Consensus 358 ~ekP~~ef~GHt~DILDlSW---SKn~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 358 SEKPFCEFKGHTADILDLSW---SKNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred cccchhhhhccchhheeccc---ccCCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 35688899999999999999 88999999999988888999877655 6999999999999 88899999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec--cC------CCcEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EH------ERRVW 664 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~--~H------~~~v~ 664 (712)
+||.+.. ...+.-.....-|+++||.| +|...+.|+++|.+++|++...+....+. .| .++|+
T Consensus 435 RiWsI~d--------~~Vv~W~Dl~~lITAvcy~P-dGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rIT 505 (712)
T KOG0283|consen 435 RLWSISD--------KKVVDWNDLRDLITAVCYSP-DGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRIT 505 (712)
T ss_pred EEeecCc--------CeeEeehhhhhhheeEEecc-CCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceee
Confidence 9999954 22233334567899999999 59999999999999999999877665542 12 23899
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.+.|.|.+...++..|.|..|+|+|.++...+..+
T Consensus 506 G~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf 540 (712)
T KOG0283|consen 506 GLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF 540 (712)
T ss_pred eeEecCCCCCeEEEecCCCceEEEeccchhhhhhh
Confidence 99999988887888899999999999876665444
|
|
| >KOG0269 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=172.65 Aligned_cols=173 Identities=14% Similarity=0.166 Sum_probs=143.8
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD 596 (712)
..+.+|...+..++| +++...++...+-|....+||++..+ +.+.+..|.+|.|+| .++.|+++.+.|.+.+||
T Consensus 127 ~~f~EH~Rs~~~ldf-h~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWD 205 (839)
T KOG0269|consen 127 TVFNEHERSANKLDF-HSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWD 205 (839)
T ss_pred hHhhhhccceeeeee-ccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEee
Confidence 478899999999999 88888887777777666679998654 345688999999999 678999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE--EEEeccCCCcEEEEEEecCCCC
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV--LTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~--~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+|-. ..+.+...+|.++|.|+.||| ++.+|||||.|++|+|||..++.. +.+.. -..+|.+|.|-|....
T Consensus 206 lRqp------~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 206 LRQP------DRCEKKLTAHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSY 277 (839)
T ss_pred ccCc------hhHHHHhhcccCceEEEeecC-CCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccc
Confidence 9742 134456779999999999999 799999999999999999987643 33333 3579999999998889
Q ss_pred EEEEEEC--CCcEEEEeCCCCcEEEEEecee
Q 005147 675 LLASGSD--DGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 675 ~l~sgs~--D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.||++|. |..|+|||++..-..+..+..|
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH 308 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYATFLEH 308 (839)
T ss_pred hhhhhhccccceEEEEeeccccccceeeecc
Confidence 9999985 9999999999877666666544
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-16 Score=162.92 Aligned_cols=163 Identities=22% Similarity=0.277 Sum_probs=128.4
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.+..++| +|....-.++++.-.. -++...+.. +..-...|++++|..||.+||+|...|.|+|||+.+ +
T Consensus 28 ~vssl~f-sp~~P~d~aVt~S~rv-qly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-----r 100 (487)
T KOG0310|consen 28 SVSSLCF-SPKHPYDFAVTSSVRV-QLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-----R 100 (487)
T ss_pred cceeEec-CCCCCCceEEecccEE-EEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-----H
Confidence 3455666 5555544444443222 224444322 223478999999999999999999999999999754 1
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcE
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSV 685 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v 685 (712)
. ......+|+.+|..+.|+|+++..|++|+.|+.+++||+.+......+.+|++.|.|.+|+|.++++++|||.||+|
T Consensus 101 ~--iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 101 V--ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred H--HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 1 12345689999999999999999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEeCCCC-cEEEEEec
Q 005147 686 KLWSINQA-ILLLHLVD 701 (712)
Q Consensus 686 ~lWd~~~~-~~v~~~~~ 701 (712)
++||+++. ..+.++..
T Consensus 179 rl~DtR~~~~~v~elnh 195 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVELNH 195 (487)
T ss_pred EEEEeccCCceeEEecC
Confidence 99999987 55555543
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-16 Score=153.44 Aligned_cols=125 Identities=19% Similarity=0.418 Sum_probs=106.8
Q ss_pred CCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 567 SSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 567 h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
..+.|.+|+|+| ...+++++|+|++||+||+... ....+.....|.++|.+++|+. +++.+++|+.|+.+++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-----g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-----GQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecC-----CcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEE
Confidence 478899999999 5567779999999999999651 2233455678899999999997 69999999999999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCC--CEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADP--TLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~--~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+.+++. .++..|.++|.++.|-+ .. ..|+|||.|.+||.||+|+..++.++
T Consensus 100 DL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~ 153 (347)
T KOG0647|consen 100 DLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATL 153 (347)
T ss_pred EccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeee
Confidence 9999964 46777999999999986 33 48999999999999999998888765
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-16 Score=155.66 Aligned_cols=186 Identities=18% Similarity=0.279 Sum_probs=152.5
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.+..+.- ......+..++.+....+|.+.+|.|+ ||.+.|++|.|++.+.+++||+.|++.+||...
T Consensus 143 e~~GHkDGiW~Vaa--~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~a 220 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAA--DSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAA 220 (481)
T ss_pred hhcccccceeeehh--hcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHh
Confidence 46799888866655 223346777778888888999988765 899999999999999999999999999999832
Q ss_pred C----cc------------cc-------------Ccc---cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 599 A----II------------NE-------------NRD---IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 599 ~----~~------------~~-------------~~~---~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
- .. .+ ..+ +..|+ ...+|.+.|.+..|-. .+..++++++|.+..+|
T Consensus 221 v~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlw 299 (481)
T KOG0300|consen 221 VNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLW 299 (481)
T ss_pred hcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-Ccceeeeeeccccceee
Confidence 1 00 00 011 11222 3458999999999987 58999999999999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceeeccCceeeC
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSFETKRTTVI 712 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~~~~~~ 712 (712)
|+.+|.++..+.+|....+.++-+| ...+++++|.|.+.++||++..-.-...+++|.++..+++|
T Consensus 300 DVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 300 DVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF 365 (481)
T ss_pred eeccCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE
Confidence 9999999999999999999999998 88999999999999999999666666778999999888775
|
|
| >KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.5e-17 Score=173.24 Aligned_cols=167 Identities=20% Similarity=0.261 Sum_probs=142.0
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.+.+.|.||.+.+..+.+ .+.+.++.....+....+||+..++ +.+|...+.++.|+|.+.++|+|+.|+.+++
T Consensus 61 ~~i~S~~~hespIeSl~f--~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~i 138 (825)
T KOG0267|consen 61 NAITSLTGHESPIESLTF--DTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKI 138 (825)
T ss_pred chhheeeccCCcceeeec--CcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccccccee
Confidence 455678999999999998 3456665555555455559998765 6689999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||.+.. .+.....+|...|.++.|+| ++.++++|+.|.+|+|||+..|+.+.+|..|+..|.++.|+| ..-
T Consensus 139 wD~Rk~-------Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp-~e~ 209 (825)
T KOG0267|consen 139 WDIRKK-------GCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHP-LEV 209 (825)
T ss_pred hhhhcc-------CceeeecCCcceeEEEeecC-CCceeeccCCcceeeeecccccccccccccccccccccccCc-hhh
Confidence 999742 23344556888899999999 599999999999999999999999999999999999999998 778
Q ss_pred EEEEEECCCcEEEEeCCCCcEE
Q 005147 675 LLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v 696 (712)
++++||.|++|++||+++-..+
T Consensus 210 Lla~Gs~d~tv~f~dletfe~I 231 (825)
T KOG0267|consen 210 LLAPGSSDRTVRFWDLETFEVI 231 (825)
T ss_pred hhccCCCCceeeeeccceeEEe
Confidence 9999999999999999864443
|
|
| >KOG0270 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.3e-16 Score=158.50 Aligned_cols=162 Identities=16% Similarity=0.268 Sum_probs=141.9
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~ 599 (712)
.||++.|..+.| +....+.++..+.++..++||+.+|++. .|...|.+++|+| .+.+|++|+.|++|.++|+|.
T Consensus 240 ~gHTdavl~Ls~-n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 240 SGHTDAVLALSW-NRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred ccchHHHHHHHh-ccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 489999999999 8888889888888888888999988754 5899999999999 567999999999999999985
Q ss_pred ccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
..+. -....-.+.|-.|.|+|...+.++++..||+|+-+|+|+. ++++++.+|.++|.++++++..+.+++|
T Consensus 319 ~~~s-------~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t 391 (463)
T KOG0270|consen 319 PSNS-------GKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST 391 (463)
T ss_pred cccc-------CceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee
Confidence 2221 1234446789999999998899999999999999999986 9999999999999999999989999999
Q ss_pred EECCCcEEEEeCCCCc
Q 005147 679 GSDDGSVKLWSINQAI 694 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~ 694 (712)
+|.|+.|++|++....
T Consensus 392 ~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 392 ASTDKVVKLWKFDVDS 407 (463)
T ss_pred ccccceEEEEeecCCC
Confidence 9999999999986433
|
|
| >KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.5e-16 Score=150.89 Aligned_cols=161 Identities=20% Similarity=0.362 Sum_probs=137.5
Q ss_pred cCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-------ceecCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEc
Q 005147 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-------DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-------~~~~h~~~V~~i~f~~~~-~~lat~~~d~~I~iwD~ 597 (712)
.+.++..+.+| +.....++...+.++...+|++.++ .++.|...|.+|+|..++ +.||++|.||.|++||+
T Consensus 148 ~~~aPlTSFDW-ne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDL 226 (364)
T KOG0290|consen 148 EFCAPLTSFDW-NEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDL 226 (364)
T ss_pred ccCCccccccc-ccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEe
Confidence 45566778899 8888899999999999999999986 266899999999999965 59999999999999999
Q ss_pred CCccccCcccccceEEecC-CCCeEEEEEcCCCCCEEEEEeCCC-cEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 598 DAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEG-VVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~p~~~~~lasgs~Dg-~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+. .+|..+ +.+... ..++..++|++++.+++||-..|. .|.|-|+|.. .++..+.+|.+.|+.|+|.|+...
T Consensus 227 R~--leHSTI---IYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~ 301 (364)
T KOG0290|consen 227 RS--LEHSTI---IYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSS 301 (364)
T ss_pred cc--cccceE---EecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCc
Confidence 86 233322 223333 678899999999999999987765 6999999986 689999999999999999999999
Q ss_pred EEEEEECCCcEEEEeCCC
Q 005147 675 LLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~ 692 (712)
.|+||++|+.+-+||+.+
T Consensus 302 hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 302 HICTAGDDCQALIWDLQQ 319 (364)
T ss_pred eeeecCCcceEEEEeccc
Confidence 999999999999999976
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-15 Score=150.92 Aligned_cols=199 Identities=22% Similarity=0.268 Sum_probs=153.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+++..|+++|..++....+. ...+...+.+|...+..+.| .+.. ..+.+.+.+....+|++..
T Consensus 5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAA-SADG-TYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEE-CCCC-CEEEEEcCCCeEEEEEcCc
Confidence 346778899999999987663332221 11244667889888878888 2222 2444444444444599886
Q ss_pred Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+. +..|...|.++.|++++.++++++.|+.|++||+++. ........|...+.+++|+|. +.++++++
T Consensus 83 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~ 154 (289)
T cd00200 83 GECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-------KCLTTLRGHTDWVNSVAFSPD-GTFVASSS 154 (289)
T ss_pred ccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-------EEEEEeccCCCcEEEEEEcCc-CCEEEEEc
Confidence 43 3357889999999999899999888999999999742 112223367889999999994 88888888
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|.+||+++++.+..+..|...|++++|+| ++..+++++.|+.|++||+++++.+..+
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred CCCcEEEEEccccccceeEecCccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecch
Confidence 899999999999999999999999999999998 8888999999999999999987776654
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=144.03 Aligned_cols=166 Identities=20% Similarity=0.261 Sum_probs=141.1
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.+.+|.+++....+ ..+|.-.++.+++..++ |+...|.++ +|...|.+++.+.|...|++||.|+.|.+|
T Consensus 10 ~~~l~~~qgaV~avry---N~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vw 86 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRY---NVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVW 86 (307)
T ss_pred ceeecccccceEEEEE---ccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEE
Confidence 3456788888888888 77888888888877776 888877665 799999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEecCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
|+.++. ......+|.++|+.|.||- ....+++|+.|.++++||.|+. +|++.+.+-.+.|.+|+.+ +
T Consensus 87 DV~TGk-------v~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~ 155 (307)
T KOG0316|consen 87 DVNTGK-------VDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---E 155 (307)
T ss_pred EcccCe-------eeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec---c
Confidence 998742 2334568999999999997 6899999999999999999875 6899998888999999986 5
Q ss_pred CEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 674 TLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|+.||.||+++.||+|.|....-++
T Consensus 156 heIvaGS~DGtvRtydiR~G~l~sDy~ 182 (307)
T KOG0316|consen 156 HEIVAGSVDGTVRTYDIRKGTLSSDYF 182 (307)
T ss_pred cEEEeeccCCcEEEEEeecceeehhhc
Confidence 789999999999999999887654443
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-15 Score=168.45 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=136.4
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.+.++.+. ..+..+...+.|....+||..+|.+. +|.+.|.++... +..+++|+.|.+|++|++.
T Consensus 244 ~l~GH~g~V~~l~~~--~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~ 319 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFP--SGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVT 319 (537)
T ss_pred eccCCCCCceeEEEe--cCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEecc
Confidence 388999999999993 25677777777777777999988765 699999999874 4588889999999999997
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
++ .+.....+|...|.||..+ ++++++|++||+|++||++++++++++.+|+.+|.++.+.+ . ..+++
T Consensus 320 n~-------~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~-~-~~~~S 387 (537)
T KOG0274|consen 320 NG-------ACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDS-E-NRLLS 387 (537)
T ss_pred Cc-------ceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecC-c-ceEEe
Confidence 42 2223344599999999997 68999999999999999999999999999999999998874 3 99999
Q ss_pred EECCCcEEEEeCCCC-cEEEEE
Q 005147 679 GSDDGSVKLWSINQA-ILLLHL 699 (712)
Q Consensus 679 gs~D~~v~lWd~~~~-~~v~~~ 699 (712)
||.|++|++||+++. +++.++
T Consensus 388 gs~D~~IkvWdl~~~~~c~~tl 409 (537)
T KOG0274|consen 388 GSLDTTIKVWDLRTKRKCIHTL 409 (537)
T ss_pred eeeccceEeecCCchhhhhhhh
Confidence 999999999999998 676544
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-15 Score=166.78 Aligned_cols=176 Identities=14% Similarity=0.181 Sum_probs=137.2
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
-.++|.||-+=|..+.| ..-.. .+..++.|....+|+.+++++ .||...|.|..|+|..+++++||.|.+|+||
T Consensus 85 clftL~GHlDYVRt~~F-HheyP-WIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW 162 (1202)
T KOG0292|consen 85 CLFTLLGHLDYVRTVFF-HHEYP-WILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW 162 (1202)
T ss_pred ehhhhccccceeEEeec-cCCCc-eEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence 35788899888887777 22222 223333333334466666554 3899999999999999999999999999999
Q ss_pred EcCCccccC----------------------cccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc--
Q 005147 596 ECDAIINEN----------------------RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-- 651 (712)
Q Consensus 596 D~~~~~~~~----------------------~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-- 651 (712)
|+......+ .+.....+.-+|...|+.++|+| +-.+|+||+.|..|++|-...-+
T Consensus 163 DisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp-TlpliVSG~DDRqVKlWrmnetKaW 241 (1202)
T KOG0292|consen 163 DISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP-TLPLIVSGADDRQVKLWRMNETKAW 241 (1202)
T ss_pred eecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecC-CcceEEecCCcceeeEEEeccccce
Confidence 997521111 11112234568999999999999 68899999999999999987654
Q ss_pred EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 652 VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 652 ~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.+-+..+|...|.|+-|+| ..++++|.|.|++|+|||+....++.++
T Consensus 242 EvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 242 EVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred eehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccceeee
Confidence 3667889999999999998 8899999999999999999999998876
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=148.43 Aligned_cols=167 Identities=25% Similarity=0.333 Sum_probs=135.1
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+++|.+.+..+.| ++. ...+.+.+.+....+|++..+. +..|...+.++.|+|++++|++++.|+.|++||+.
T Consensus 4 ~~~~h~~~i~~~~~-~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 4 TLKGHTGGVTCVAF-SPD-GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred HhcccCCCEEEEEE-cCC-CCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 56799999999999 332 2333444434333449988653 34688899999999999999999999999999997
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
.. ........|...+.+++|+|. +.++++++.||.|.+||+++++.+..+..|...|.+++|+| ++.++++
T Consensus 82 ~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 152 (289)
T cd00200 82 TG-------ECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-DGTFVAS 152 (289)
T ss_pred cc-------cceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-cCCEEEE
Confidence 52 122334467789999999994 78898888899999999999999999999999999999998 6889999
Q ss_pred EECCCcEEEEeCCCCcEEEEEe
Q 005147 679 GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++.|+.|++||+++++.+..+.
T Consensus 153 ~~~~~~i~i~d~~~~~~~~~~~ 174 (289)
T cd00200 153 SSQDGTIKLWDLRTGKCVATLT 174 (289)
T ss_pred EcCCCcEEEEEccccccceeEe
Confidence 9889999999999887765544
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-15 Score=150.33 Aligned_cols=182 Identities=16% Similarity=0.228 Sum_probs=143.1
Q ss_pred ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc------------CC----------ceecCCC
Q 005147 513 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN------------QG----------DLLNSSN 569 (712)
Q Consensus 513 ~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~------------~~----------~~~~h~~ 569 (712)
++|.+.-....+..|.+++..-.| +.||.+..+..-+..++ .|+. .| ++-.|.+
T Consensus 97 s~e~~~yEt~ylt~HK~~cR~aaf---s~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d 173 (430)
T KOG0640|consen 97 SPEPSEYETKYLTSHKSPCRAAAF---SPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD 173 (430)
T ss_pred CCCCcccceEEEeecccceeeeee---CCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC
Confidence 344444566889999999988888 67777666654444433 5553 11 1224799
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.|+++.|+|...+|++|+.|++||+||+... ..+.....+.....|.|++||| .|.+|+.|..-.++++||+.+
T Consensus 174 evn~l~FHPre~ILiS~srD~tvKlFDfsK~-----saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T 247 (430)
T KOG0640|consen 174 EVNDLDFHPRETILISGSRDNTVKLFDFSKT-----SAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNT 247 (430)
T ss_pred cccceeecchhheEEeccCCCeEEEEecccH-----HHHHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEEeccc
Confidence 9999999999999999999999999999752 1222223344567899999999 699999999999999999999
Q ss_pred CcEEEEe---ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceee
Q 005147 650 SQVLTEM---REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSF 704 (712)
Q Consensus 650 ~~~~~~~---~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~ 704 (712)
-+|...- ..|++.|++|.+++ .+++.++||.||.|+|||--++.|+.++-..|-
T Consensus 248 ~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~ 304 (430)
T KOG0640|consen 248 YQCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG 304 (430)
T ss_pred eeEeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcC
Confidence 9987664 46999999999997 999999999999999999888888877665443
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=140.79 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=145.1
Q ss_pred CCCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 488 PVKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+.||-.-.+-++++.+|..+=.+..+. .-.-.-+..||++.|..++. + .....+...+.+....+||+
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Di-d-~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDI-D-WDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEe-c-CCcceeeeccccceeEEEEc
Confidence 34556666666667777776541111111 01122366789988877654 1 12223333344444455666
Q ss_pred cCCceec---CCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 560 NQGDLLN---SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 560 ~~~~~~~---h~~~V~~i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
++|+.+. ...+|..+.|+++|++++.+.. .+.|.+||++..........+......+.++++..-|.| -+.
T Consensus 82 ~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~-l~~ 160 (327)
T KOG0643|consen 82 ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP-LGE 160 (327)
T ss_pred CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc-cCC
Confidence 6666553 3678889999998887777643 467889998743221112222233445678999999999 489
Q ss_pred EEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 632 QIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 632 ~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|++|..||.|.+||+++|+ .+..-+.|+..|+.++|+| |..++++||.|.+-++||.++-..+.++.
T Consensus 161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~-d~T~FiT~s~Dttakl~D~~tl~v~Kty~ 229 (327)
T KOG0643|consen 161 TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSR-DRTYFITGSKDTTAKLVDVRTLEVLKTYT 229 (327)
T ss_pred EEEEecCCCcEEEEEcccCceeeechhhhccccccccccC-CcceEEecccCccceeeeccceeeEEEee
Confidence 99999999999999999984 5666688999999999997 99999999999999999999988887764
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.7e-16 Score=177.09 Aligned_cols=209 Identities=20% Similarity=0.207 Sum_probs=139.3
Q ss_pred ccceeeccCCCCCcccc-cccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~-~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+ .+|-.|+|-- +. .....+|++ ++=...++..+. ++... +.+++|+|+-||+|
T Consensus 108 rqrfa~-kiNkq~lilRnil-----t~a~npfvv------gDc~tllk~~g~-lPvdm--------vla~Eylh~ygivh 166 (1205)
T KOG0606|consen 108 RQRFAM-KINKQNLILRNIL-----TFAGNPFVV------GDCATLLKNIGP-LPVDM--------VLAVEYLHSYGIVH 166 (1205)
T ss_pred ccchhh-cccccchhhhccc-----cccCCccee------chhhhhcccCCC-Ccchh--------hHHhHhhccCCeec
Confidence 666666 6666665432 11 223334444 344454544332 44433 78999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||+||+|.+|..-|++|+.|||+.+.-...- .++.
T Consensus 167 rdlkpdnllIT~mGhiKlTDfgLsk~GLms~----------------------------------------atnl----- 201 (1205)
T KOG0606|consen 167 RDLKPDNLLITSMGHIKLTDFGLSKKGLMSL----------------------------------------ATNL----- 201 (1205)
T ss_pred CCCCCCcceeeecccccccchhhhhhhhhhc----------------------------------------cchh-----
Confidence 9999999999999999999999885321110 0000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
-+...+. ..+.|. ....+||+.|+|||++....|+..+|+|++|+++||.
T Consensus 202 --------------~eg~I~k--------------~t~Ef~--dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeF 251 (1205)
T KOG0606|consen 202 --------------KEGHIEK--------------DTHEFQ--DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 251 (1205)
T ss_pred --------------hhcchHH--------------HHHHhh--hccccCCccccChhhhhhhccCCCccHHHHHHHHHHH
Confidence 0000000 000000 0115899999999999999999999999999999998
Q ss_pred hC---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~~ 331 (712)
+- ||+........-..+...+ +|.......++..++|.++|+.+|..|. .+-++.+|+||+.....
T Consensus 252 LVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 252 LVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred heeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 86 8887755443334444333 3444444556667999999999999995 57889999999987654
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.1e-15 Score=169.11 Aligned_cols=206 Identities=19% Similarity=0.246 Sum_probs=163.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------------------------CCCceeeccCCCccceecccCCCCCC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------------------------SINNLGSKEGYSEGRRSGWINPFLEG 543 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~~~~~~l~gh~~~~~~~~~~~~~~~~ 543 (712)
...|...+.|+.||+||+++|.++.++. -.-..+|+||.++|..+.| +| .+.
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~W-sp-~~~ 142 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNW-SP-DDS 142 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceecc-CC-Ccc
Confidence 4457789999999999998877654432 0124578999999999999 66 677
Q ss_pred cEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCC
Q 005147 544 LCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~ 619 (712)
+++..+.+...++|+.++.+ +.+|.+.|-.+.|+|-|++|||-+.|++|+||++.+....+ .+..|..+..-...
T Consensus 143 ~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k-~It~pf~~~~~~T~ 221 (942)
T KOG0973|consen 143 LLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEK-SITKPFEESPLTTF 221 (942)
T ss_pred EEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeE-eeccchhhCCCcce
Confidence 77788888888889998765 34899999999999999999999999999999976522211 12334444444566
Q ss_pred eEEEEEcCCCCCEEEEEeC----CCcEEEEECCCCcEEEEeccCCCcEEEEEEecC----C--------CC----EEEEE
Q 005147 620 LSSICWNSYIKSQIASSNF----EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA----D--------PT----LLASG 679 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~----Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~----~--------~~----~l~sg 679 (712)
+..++|+| ||.+|++... -.++.|.+=.+.+.-..|-+|.++|.++.|+|. . ++ ++|+|
T Consensus 222 f~RlSWSP-DG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg 300 (942)
T KOG0973|consen 222 FLRLSWSP-DGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG 300 (942)
T ss_pred eeecccCC-CcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence 88999999 6999999752 346888887777888899999999999999982 1 22 79999
Q ss_pred ECCCcEEEEeCCCCcEEEEE
Q 005147 680 SDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 680 s~D~~v~lWd~~~~~~v~~~ 699 (712)
|.|++|-||.....+++..+
T Consensus 301 SqDrSlSVW~T~~~RPl~vi 320 (942)
T KOG0973|consen 301 SQDRSLSVWNTALPRPLFVI 320 (942)
T ss_pred cCCccEEEEecCCCCchhhh
Confidence 99999999999988887553
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=143.87 Aligned_cols=121 Identities=23% Similarity=0.344 Sum_probs=109.0
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
-.+.++|..+.|+.||++.+|||.|++||+|+.-.+ .......+|...|..++.+. +...|++|+.|..|.+
T Consensus 14 ~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-------~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 14 DCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-------ALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQV 85 (307)
T ss_pred cccccceEEEEEccCCCEEEEcCCCceEEeeccccc-------ceeeeecCCCceeeeccccc-cccccccCCCCceEEE
Confidence 357899999999999999999999999999998542 33345668899999999886 6899999999999999
Q ss_pred EECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
||+.+|+.++.|.+|.+.|+.|.|+ .+...++|||.|.++++||.|+..
T Consensus 86 wDV~TGkv~Rr~rgH~aqVNtV~fN-eesSVv~SgsfD~s~r~wDCRS~s 134 (307)
T KOG0316|consen 86 WDVNTGKVDRRFRGHLAQVNTVRFN-EESSVVASGSFDSSVRLWDCRSRS 134 (307)
T ss_pred EEcccCeeeeecccccceeeEEEec-CcceEEEeccccceeEEEEcccCC
Confidence 9999999999999999999999999 489999999999999999998643
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.4e-15 Score=147.75 Aligned_cols=197 Identities=13% Similarity=0.099 Sum_probs=154.1
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCC--------CccceecccCCCCCCcEEEEEcCCcEEE-EEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY--------SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl 559 (712)
...+|+..|++..||-||..++...-+.. ...++..+ .++..+.|+.=...+.+.++...++.++ |.+
T Consensus 101 eltgHKDSVt~~~FshdgtlLATGdmsG~---v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 101 ELTGHKDSVTCCSFSHDGTLLATGDMSGK---VLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred EecCCCCceEEEEEccCceEEEecCCCcc---EEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 46799999999999999998765533221 11111111 3566777877677888889999999998 988
Q ss_pred cCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc----------------------------
Q 005147 560 NQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI---------------------------- 607 (712)
Q Consensus 560 ~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---------------------------- 607 (712)
.++. +.||...+++=.|.|+|+.++++..|++|++|++.++...+...
T Consensus 178 p~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~ 257 (399)
T KOG0296|consen 178 PSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVA 257 (399)
T ss_pred CCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccE
Confidence 8732 34899999999999999999999999999999998721000000
Q ss_pred -------------------c-----------------------------------------cceEEecCCCCeEEEEEcC
Q 005147 608 -------------------H-----------------------------------------YPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 608 -------------------~-----------------------------------------~~~~~~~~~~~v~~v~~~p 627 (712)
+ .+.....|...|+.+.|-+
T Consensus 258 ~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~ 337 (399)
T KOG0296|consen 258 CGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN 337 (399)
T ss_pred EEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC
Confidence 0 0111224567788888876
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
..+|++++.+|.|++||.|+|+++.+|.+|...|.+++++| +.++++|+|+|++.+|+++.
T Consensus 338 --t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~-~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 338 --TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSP-QKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred --cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcC-CCcEEEEecCCCeEEEEecC
Confidence 57999999999999999999999999999999999999998 99999999999999999874
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-15 Score=163.84 Aligned_cols=145 Identities=20% Similarity=0.352 Sum_probs=125.2
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
-+..+.++++.-.++.+..-. +-||.=+|.|+..+||+.+++|||.|++||||-++= +.|.....+|.
T Consensus 525 VsLLdnTVkVyflDtlKFfls-----LYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdF-------GDCHKS~fAHd 592 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDTLKFFLS-----LYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDF-------GDCHKSFFAHD 592 (888)
T ss_pred EEeccCeEEEEEecceeeeee-----ecccccceeEEeccCCcCeEEeccCCCceEEecccc-------chhhhhhhccc
Confidence 345667777777776665332 348999999999999999999999999999998853 34556778999
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
..|.+|.|-| ....+.|+|.||.|+-||...-..+.++.+|...|||++.+| +|.+++|+|.|.+|++|.-.....+
T Consensus 593 DSvm~V~F~P-~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~-~G~~vvs~shD~sIRlwE~tde~~~ 669 (888)
T KOG0306|consen 593 DSVMSVQFLP-KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSP-NGSFVVSSSHDKSIRLWERTDEILI 669 (888)
T ss_pred CceeEEEEcc-cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcC-CCCeEEeccCCceeEeeeccCccee
Confidence 9999999999 578999999999999999999999999999999999999998 9999999999999999997654444
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-15 Score=159.60 Aligned_cols=129 Identities=20% Similarity=0.318 Sum_probs=103.8
Q ss_pred cCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 NSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~-~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
||...++|.+|+|+. +.|+|++.|++++|||+.... .+..+..+....+.+-.+++++|+| ++.+||+|..||.|.+
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nr-dg~~iAagc~DGSIQ~ 343 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNR-DGKLIAAGCLDGSIQI 343 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCch-hheeEEeeccCCCcccCceeeecCC-CcchhhhcccCCceee
Confidence 799999999999955 589999999999999997532 1222222333335567789999999 6999999999999999
Q ss_pred EECCCCc--E-EEEeccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 645 WDVSRSQ--V-LTEMREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 645 wD~~~~~--~-~~~~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
||.+... + .+.-.+|.. .|+||.||+ ||++|+|-|.|.++++||+++.+..+
T Consensus 344 W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 344 WDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGFDDTLKVWDLRQFKKPL 400 (641)
T ss_pred eecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhccCCCceeeeeccccccch
Confidence 9986542 2 333467887 999999997 99999999999999999999866543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.2e-17 Score=182.78 Aligned_cols=200 Identities=21% Similarity=0.245 Sum_probs=139.8
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
.+.+.|||.+.+-- +. ....--|++-+|--.+|.|.|.. .+-+...|.+.|+.||+.||.-||..||+|+|||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~---~t~kAAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VL---VTDKAAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HH---HhhHHHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 66688999988444 32 23334566777777889998833 334789999999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||||++-|-+.+.||...+..=- |.|. .+||+
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYL---------------------PeDN--------Padf~------------------- 181 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYL---------------------PEDN--------PADFT------------------- 181 (1431)
T ss_pred eEEEeeechhhhhcccccCCccC---------------------CCCC--------cccce-------------------
Confidence 99999999999999986632100 0000 02331
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC----------C-CCCccchHHHHH
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 260 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------~-~~~~sDIwSlGv 260 (712)
...|.. ..-..|.|||.+... + .+++.||||+||
T Consensus 182 ---------------fFFDTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 182 ---------------FFFDTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred ---------------EEEecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 111111 112369999988441 2 678999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCc--hhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+++||++ |.+.- ......-.+ ...+...+...+ ....+|..|++.||++|.++++.|+.
T Consensus 227 ViaELf~Eg~PlF~L---SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFTL---SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCcccH---HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999998 43322 233333333 334445555443 34489999999999999999999995
|
|
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.7e-15 Score=143.94 Aligned_cols=128 Identities=20% Similarity=0.359 Sum_probs=108.5
Q ss_pred cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC--CEEEEEeCCCcE
Q 005147 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEGVV 642 (712)
Q Consensus 566 ~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~lasgs~Dg~V 642 (712)
+|.-.|.++.|-| |..+|.+++.|+++||||+++. +.+..+.-..+|.+-+|+|--. .++|+|..|-.|
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl--------Q~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~V 170 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL--------QEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQV 170 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccc--------eeeEEeecCceeehhhcChhhhcceEEEEecCCCcE
Confidence 5788999999999 7779999999999999999872 3344555567888888888422 378888888999
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC-cEEEEEec
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA-ILLLHLVD 701 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~-~~v~~~~~ 701 (712)
+|-|+.+|.+..++.+|.+.|.+|.|+|...-.|+|||.||.|++||++.. .++..+-+
T Consensus 171 rLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~ 230 (397)
T KOG4283|consen 171 RLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQ 230 (397)
T ss_pred EEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeec
Confidence 999999999999999999999999999988889999999999999999976 45555443
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-15 Score=143.40 Aligned_cols=164 Identities=20% Similarity=0.314 Sum_probs=121.5
Q ss_pred eeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCCc------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKV 594 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~i 594 (712)
.++||.+.+.++.| ..+|. ++..++++...+|.+.-.+ ..+|.+.|..++|+| ..++|++++.|++|++
T Consensus 15 ~~~~~~~~v~Sv~w---n~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAW---NCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HhhhhhhcceEEEE---cccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence 35688888888888 23332 2233334444445554333 347999999999998 6679999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC------------------------
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS------------------------ 650 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~------------------------ 650 (712)
||++.+ .+......+..-..++|+| ++.+++.++.|..|...|.++-
T Consensus 92 wd~r~~--------k~~~~i~~~~eni~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~F 162 (313)
T KOG1407|consen 92 WDIRSG--------KCTARIETKGENINITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLF 162 (313)
T ss_pred EEeccC--------cEEEEeeccCcceEEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEE
Confidence 999863 3344445555666777777 4777777777777777777642
Q ss_pred -----------------cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 651 -----------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 651 -----------------~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+++.++++|...+.||.|+| +|.+||+||.|..|.+||+..--|++.+
T Consensus 163 flt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~i 227 (313)
T KOG1407|consen 163 FLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCI 227 (313)
T ss_pred EEecCCceEEEEeccccccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhhheee
Confidence 35667789999999999998 9999999999999999999876666544
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.1e-15 Score=147.52 Aligned_cols=164 Identities=20% Similarity=0.269 Sum_probs=133.6
Q ss_pred CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---e---ecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 518 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---L---LNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 518 ~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---~---~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.+...-+.||+.+|.++.| +|..++.+..++.+....+||++.+. + ..|.+-|+-|+|++.-.+||+|+.||+
T Consensus 247 ~vd~~Pf~gH~~SVEDLqW-SptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt 325 (440)
T KOG0302|consen 247 KVDQRPFTGHTKSVEDLQW-SPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGT 325 (440)
T ss_pred eecCccccccccchhhhcc-CCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCce
Confidence 3444556789999999999 99999999999999888889999872 2 258999999999998889999999999
Q ss_pred EEEEEcCCccccCcccccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc----------------EEE
Q 005147 592 IKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----------------VLT 654 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~----------------~~~ 654 (712)
++|||++...- ..|+ ....|+.+|+||.|+|.....|++++.|.+|.|||+..-. +-+
T Consensus 326 ~~iwDLR~~~~-----~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQ 400 (440)
T KOG0302|consen 326 LSIWDLRQFKS-----GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQ 400 (440)
T ss_pred EEEEEhhhccC-----CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCce
Confidence 99999987322 2344 4567999999999999999999999999999999985210 111
Q ss_pred EeccC--CCcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 655 EMREH--ERRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 655 ~~~~H--~~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
-+--| .+.|-.|.|++..+.+++|.+.||...+
T Consensus 401 LLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 401 LLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF 435 (440)
T ss_pred eEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence 11224 4678999999999999999999997543
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.7e-15 Score=157.11 Aligned_cols=212 Identities=23% Similarity=0.258 Sum_probs=148.8
Q ss_pred ceeeccCCCC-CcccccccccccccccCceEEEEe-eCCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 29 GVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIE-WGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 29 ~~~l~~~~H~-ni~~~~~~~~~~~~~~~~~~l~~e-~~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.-+++.+.|+ +++.+++ .+ ......+++++ +.+++|.+++.... ..++...+..++.|++.++.|+|+.|++
T Consensus 48 ~~~~~~~~~~~~i~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~ 123 (384)
T COG0515 48 IQILASLNHPPNIVKLYD-FF---QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGII 123 (384)
T ss_pred HHHHHHccCCcceeeEEE-EE---ecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3378888888 6988877 33 12222444544 47899998775543 2589999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||+||+||+++..+ .++++|||.++........ .
T Consensus 124 hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~------------ 159 (384)
T COG0515 124 HRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S------------ 159 (384)
T ss_pred ccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c------------
Confidence 999999999999888 7999999988532211000 0
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 260 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGv 260 (712)
. .........|+.+|++||.+.+ ..+....|+|++|+
T Consensus 160 -------~---------------------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~ 199 (384)
T COG0515 160 -------S---------------------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199 (384)
T ss_pred -------c---------------------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHH
Confidence 0 0000112578999999999987 56899999999999
Q ss_pred HHHHhhC---CCCCChh---hHHHHHhhcccCCC---chhhhcC-----chhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 261 LLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 261 ll~eLl~---pf~~~~~---~~~~~~~~~~~~~~---~~~~~~~-----~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
+++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+...+++..
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 279 (384)
T COG0515 200 TLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279 (384)
T ss_pred HHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence 9999888 5444332 22333333333322 1111111 2445899999999999999999988886555
Q ss_pred CC
Q 005147 327 EP 328 (712)
Q Consensus 327 ~~ 328 (712)
..
T Consensus 280 ~~ 281 (384)
T COG0515 280 HL 281 (384)
T ss_pred Cc
Confidence 44
|
|
| >KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=141.27 Aligned_cols=208 Identities=20% Similarity=0.312 Sum_probs=156.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCC--CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSI--NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~--~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
..+|+.+++++.|..-|+..+.++.+. +.. -.-..+.|.+.+..+.|++|.....++..++|.+..+|
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 457888999999999998775553321 111 22467899999999999999999999999999999888
Q ss_pred EccCCc-------------eecCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCcccc-------------------
Q 005147 558 DLNQGD-------------LLNSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINE------------------- 603 (712)
Q Consensus 558 dl~~~~-------------~~~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~------------------- 603 (712)
.-...+ +....+.|++|.|.| -|-.+|+++.||.++||+.....+.
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~ 168 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKN 168 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccc
Confidence 773221 234588999999999 5679999999999999997651100
Q ss_pred -----------------------------------------CcccccceEEecCCCCeEEEEEcCCCCC---EEEEEeCC
Q 005147 604 -----------------------------------------NRDIHYPVVEMASRSKLSSICWNSYIKS---QIASSNFE 639 (712)
Q Consensus 604 -----------------------------------------~~~~~~~~~~~~~~~~v~~v~~~p~~~~---~lasgs~D 639 (712)
.+..+......+|..+|..|+|.|..+. +||+++.|
T Consensus 169 ~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD 248 (361)
T KOG2445|consen 169 KQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD 248 (361)
T ss_pred cCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecC
Confidence 0000011122367788999999996654 89999999
Q ss_pred CcEEEEECCCC--------------------cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC---CCcEE
Q 005147 640 GVVQVWDVSRS--------------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN---QAILL 696 (712)
Q Consensus 640 g~V~lwD~~~~--------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~---~~~~v 696 (712)
| |+||.+... +.+..+.+|...||.+.|+ ..|.+|+|.|+||+|++|-.+ ..+|+
T Consensus 249 g-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN-mtGtiLsStGdDG~VRLWkany~n~~kC~ 326 (361)
T KOG2445|consen 249 G-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN-MTGTILSSTGDDGCVRLWKANYNNLWKCT 326 (361)
T ss_pred c-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe-eeeeEEeecCCCceeeehhhhhhhhheee
Confidence 9 999998731 2356688999999999999 599999999999999999643 34444
Q ss_pred EEE
Q 005147 697 LHL 699 (712)
Q Consensus 697 ~~~ 699 (712)
..+
T Consensus 327 sv~ 329 (361)
T KOG2445|consen 327 SVL 329 (361)
T ss_pred eEE
Confidence 433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 712 | ||||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 1e-12 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-11 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 9e-06 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 9e-06 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 7e-05 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 9e-05 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-04 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 2e-04 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 2e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 3e-04 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 6e-04 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 6e-04 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 6e-04 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 6e-04 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 6e-04 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 6e-04 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 6e-04 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 7e-04 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 7e-04 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 7e-04 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 7e-04 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 7e-04 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 8e-04 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 8e-04 |
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 712 | |||
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.98 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.98 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.98 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.98 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.98 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.98 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.98 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.98 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.98 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.98 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.98 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.98 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.97 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.97 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.97 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.97 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.97 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.97 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.97 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.97 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.97 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.97 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.97 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.97 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.97 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.97 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.97 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.97 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.97 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.97 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.97 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.97 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.97 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.97 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.97 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.97 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.97 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.97 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.97 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.97 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.97 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.97 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.97 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.97 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.97 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.97 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.97 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.97 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.97 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.97 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.97 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.97 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.97 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.97 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.97 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.97 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.97 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.97 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.97 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.97 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.97 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.97 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.97 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.97 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.97 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.97 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.97 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.97 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.97 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.97 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.97 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.97 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.97 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.97 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.97 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.97 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.97 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.97 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.97 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.97 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.97 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.97 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.97 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.97 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.96 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.96 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.96 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.96 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.96 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.96 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.96 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.96 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.96 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.96 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.96 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.96 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.96 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.96 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.96 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.96 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.96 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.96 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.96 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.96 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.96 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.96 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.96 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.96 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.96 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.96 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.96 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.96 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.96 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.96 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.96 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.96 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.96 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.96 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.96 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.96 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.96 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.96 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.96 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.96 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.96 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.96 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.96 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.96 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.96 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.96 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.96 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.96 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.96 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.96 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.96 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.96 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.96 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.96 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.96 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.96 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.96 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.96 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.96 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.96 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.96 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.96 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.96 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.96 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.96 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.96 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.96 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.96 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.96 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.96 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.95 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.95 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.95 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.95 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.95 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.95 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.95 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.95 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.95 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.95 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.95 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.95 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.95 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.95 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.95 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.95 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.95 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.95 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.95 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.95 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.95 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.95 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.95 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.95 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.95 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.95 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.95 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.95 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.95 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.95 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.95 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.95 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.95 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.95 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.95 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.95 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.94 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.94 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.94 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.94 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.94 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.94 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.94 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.93 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.89 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.89 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.89 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.89 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.89 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.88 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.88 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.88 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.88 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.88 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.88 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.88 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.88 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.88 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.87 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.87 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.87 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.87 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.87 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.87 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.86 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.86 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.86 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.86 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.86 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.86 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.86 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.86 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.85 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.85 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.85 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.85 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.85 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.85 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.84 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.84 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.83 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.83 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.83 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.83 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.82 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.82 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.82 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.82 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.81 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.81 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.81 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.81 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.8 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.8 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.8 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.8 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.79 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.79 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.79 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.79 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.79 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.79 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.79 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.79 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.79 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.79 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.79 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.78 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.78 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.78 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.78 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.78 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.78 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.78 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.78 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.78 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.77 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.77 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.77 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.77 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.77 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.77 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.77 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.77 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.77 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.77 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.76 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.76 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.76 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.76 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.75 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.75 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.75 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.75 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.74 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.74 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.74 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.74 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.74 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.74 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.74 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.74 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.74 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.74 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.74 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.74 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.73 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.73 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.73 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.73 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.72 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.72 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.71 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.71 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.71 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.7 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.7 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.7 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.68 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.68 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.67 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.67 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.67 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.66 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.66 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.65 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.64 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.63 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.63 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.62 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.57 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.54 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.5 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.49 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.48 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.44 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.39 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.38 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.34 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.21 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.2 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.19 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.18 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.17 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.13 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.13 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.12 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.11 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.11 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.09 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.08 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.06 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.04 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.04 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.03 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.03 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.03 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.02 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.02 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.01 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.01 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.97 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.96 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.93 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.92 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.9 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.87 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.85 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.84 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.82 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.74 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.74 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.73 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.7 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.69 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.69 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.6 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.58 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.56 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.55 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.55 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.51 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.47 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.42 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.41 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.39 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.38 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.32 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.27 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.26 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.25 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.25 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.25 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.23 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.22 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.2 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.18 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.17 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.16 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.16 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.13 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.12 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.1 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.02 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.02 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.96 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.95 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.92 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.9 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.88 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 97.85 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.78 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.76 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.75 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 97.71 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.71 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.63 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.61 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.59 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.52 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.52 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.51 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.51 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.49 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.48 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.46 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.45 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.43 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.35 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.3 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.27 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.17 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.1 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.0 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.98 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 96.87 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.66 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 96.61 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 96.56 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.55 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 96.46 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.42 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.42 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 96.39 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.38 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 96.38 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.36 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 96.35 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 96.34 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.31 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 96.24 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.21 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.16 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 96.04 |
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=359.23 Aligned_cols=206 Identities=15% Similarity=0.180 Sum_probs=167.4
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
+|..+|+.++|||||++++ +|+.. .....++++||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 74 ~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 74 EEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5666899999999999998 55432 334567888888 5899999995543 4999999999999999999999999
Q ss_pred ceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 IvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||||+||||+ .+|.+||+|||+++.....
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---------------------------------------------- 185 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---------------------------------------------- 185 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT----------------------------------------------
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC----------------------------------------------
Confidence 99999999999998 4789999999988421100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|||||++.+ .|+.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvi 218 (290)
T 3fpq_A 186 ----------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 218 (290)
T ss_dssp ----------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHH
Confidence 0011579999999999865 59999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||||+| ||.........+..+.....|+.+.... +...+||.+||..||++|||+.|+|+||||++
T Consensus 219 lyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 219 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999 7765555556666677766666555444 55669999999999999999999999999985
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=361.10 Aligned_cols=225 Identities=25% Similarity=0.390 Sum_probs=171.6
Q ss_pred eccceeeccCCCCCcccccccccccccc---------cCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHH
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA---------IDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVE 93 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~---------~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~ 93 (712)
.+|..+|+.++|||||++++ ++.+... ...+|++||| .|++|.++|..... ..++..++.|++||+.
T Consensus 51 ~~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~ 129 (299)
T 4g31_A 51 MREVKALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129 (299)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHH
Confidence 36777899999999999998 4432221 2246788888 59999999965432 2344568999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++|||||||||+||||+.+|.+||+|||+++.......... ..
T Consensus 130 al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~-----------------------------~~-- 178 (299)
T 4g31_A 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-----------------------------VL-- 178 (299)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------------------------
T ss_pred HHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------------------------cc--
Confidence 99999999999999999999999999999999999965433211000 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. ......+....+||+.|||||++.+..|+.++
T Consensus 179 ~-----------------------------------------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~ 211 (299)
T 4g31_A 179 T-----------------------------------------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV 211 (299)
T ss_dssp ------------------------------------------------------------CCCTTSCHHHHTTCCCCTHH
T ss_pred c-----------------------------------------------ccccccccCCcccCccccCHHHHcCCCCCCHH
Confidence 0 00000011226899999999999999999999
Q ss_pred chHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++||....+....+..+....+|+.+....+...+||.+||+.||++|||+.|+|+||||+...
T Consensus 212 DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 287 (299)
T 4g31_A 212 DIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287 (299)
T ss_dssp HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred HHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence 9999999999999999877666677777777788887777788888999999999999999999999999998764
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-42 Score=364.53 Aligned_cols=207 Identities=17% Similarity=0.301 Sum_probs=166.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ +|.+ ...+|++||| .||+|.+++.+. .+++.+++.|++||+.||+|||++||||
T Consensus 120 ~Ei~il~~l~HpnIV~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiH 193 (346)
T 4fih_A 120 NEVVIMRDYQHENVVEMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIH 193 (346)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667899999999999988 5533 3467888888 589999999543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++.......
T Consensus 194 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------------ 225 (346)
T 4fih_A 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 225 (346)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSSSC------------------------------------------------
T ss_pred ccCCHHHEEECCCCCEEEecCcCceecCCCCC------------------------------------------------
Confidence 99999999999999999999999854322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||++|||||++.+..|+.++|||||||++|||
T Consensus 226 ------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 263 (346)
T 4fih_A 226 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263 (346)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence 00125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+.....+. ......+...+||.+||..||++|||+.|+|+||||+....
T Consensus 264 l~G~~PF~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 264 VDGEPPYFNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHSSCTTTTSCH-HHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHCCCCCCCcCH-HHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 99 6665433 34455554443322 22334556669999999999999999999999999987543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=349.78 Aligned_cols=205 Identities=18% Similarity=0.265 Sum_probs=159.9
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+|..+|+.++||||+++++ ++++ ...+|++|||++++|.++|.+.+ .+++.+++.|++||+.||+|||++||+|
T Consensus 61 ~~Ei~il~~l~HpnIv~~~~-~~~~---~~~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiH 135 (275)
T 3hyh_A 61 EREISYLRLLRHPHIIKLYD-VIKS---KDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 135 (275)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 35667899999999999888 5533 35689999999999999996554 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++......
T Consensus 136 RDiKP~NILl~~~~~vkl~DFGla~~~~~~~------------------------------------------------- 166 (275)
T 3hyh_A 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN------------------------------------------------- 166 (275)
T ss_dssp CCCCTTTEEECTTCCEEECCSSCC--------------------------------------------------------
T ss_pred ccCChHHeEECCCCCEEEeecCCCeecCCCC-------------------------------------------------
Confidence 9999999999999999999999984321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....+||+.|||||++.+..| +.++|||||||++||
T Consensus 167 ------------------------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~ 204 (275)
T 3hyh_A 167 ------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 204 (275)
T ss_dssp --------------------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHH
Confidence 0011579999999999998886 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||..... ...+..+....++ ......+...+||.+||+.||++|||++|+|+||||+..
T Consensus 205 lltg~~PF~~~~~-~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 205 MLCRRLPFDDESI-PVLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHCCCCCCCCCH-HHHHHHHHcCCCC-CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 999 7765433 3444555444332 112234556699999999999999999999999999754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=360.09 Aligned_cols=208 Identities=18% Similarity=0.227 Sum_probs=169.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|+.++|||||++++ ++++ ...+|++||| .|++|.++|. ..+..+++.+++.|++||+.||+|||++|||
T Consensus 72 ~E~~il~~l~HpnIV~~~~-~~~~---~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~Ii 147 (350)
T 4b9d_A 72 REVAVLANMKHPNIVQYRE-SFEE---NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147 (350)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6677899999999999888 5533 3467888888 4899999994 3444579999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.+||+|||+++......
T Consensus 148 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------------------------------------------------ 179 (350)
T 4b9d_A 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV------------------------------------------------ 179 (350)
T ss_dssp ETTCCGGGEEECTTCCEEECSTTEESCCCHHH------------------------------------------------
T ss_pred eccCCHHHEEECCCCCEEEcccccceeecCCc------------------------------------------------
Confidence 99999999999999999999999985431100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+||++|||||++.+..|+.++|||||||+|||
T Consensus 180 ------------------------------------------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilye 217 (350)
T 4b9d_A 180 ------------------------------------------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYE 217 (350)
T ss_dssp ------------------------------------------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence 00012579999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||..... ...+..+....+|+......++..+||.+||..||++|||+.|+|+||||+...
T Consensus 218 mltG~~PF~~~~~-~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 218 LCTLKHAFEAGSM-KNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp HHHSSCSCCCSSH-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred HHHCCCCCCCcCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 999 7765544 345555555555554444456667999999999999999999999999998653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-41 Score=363.96 Aligned_cols=207 Identities=17% Similarity=0.301 Sum_probs=166.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ +|.+ .+.+|++||| .||+|.++++.. .+++.+++.|++||+.||+|||++||||
T Consensus 197 ~Ei~il~~l~HpnIV~l~~-~~~~---~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiH 270 (423)
T 4fie_A 197 NEVVIMRDYQHENVVEMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIH 270 (423)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCceEE-EEEE---CCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999988 5533 3467888888 589999999543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.|||+|||+++.......
T Consensus 271 RDiKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------------ 302 (423)
T 4fie_A 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 302 (423)
T ss_dssp CCCSTTTEEECTTCCEEECCCTTCEECCSSCC------------------------------------------------
T ss_pred ccCCHHHEEEcCCCCEEEecCccceECCCCCc------------------------------------------------
Confidence 99999999999999999999999854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||++|||||++.+..|+.++|||||||++|||
T Consensus 303 ------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 340 (423)
T 4fie_A 303 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340 (423)
T ss_dssp ------------------------------------------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence 00125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+.....+. ......+...+||.+||..||++|||+.|+|+||||+....
T Consensus 341 l~G~~PF~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 341 VDGEPPYFNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHSSCTTTTSCH-HHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHCCCCCCCcCH-HHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 99 6655433 34455554443222 22233456669999999999999999999999999987543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=351.96 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=166.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++++ ...+|++||| .||+|.++|++.+ .+++.+++.|++||+.||+|||++||||
T Consensus 81 ~E~~il~~l~HpnIv~l~~-~~~~---~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiH 155 (311)
T 4aw0_A 81 RERDVMSRLDHPFFVKLYF-TFQD---DEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIH 155 (311)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 5666899999999999888 5543 3467888888 5899999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++........
T Consensus 156 RDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~----------------------------------------------- 188 (311)
T 4aw0_A 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----------------------------------------------- 188 (311)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEECCTTTTC-----------------------------------------------
T ss_pred CCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc-----------------------------------------------
Confidence 999999999999999999999998643221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||+.|||||++.+..|+.++|||||||++|||
T Consensus 189 -----------------------------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 227 (311)
T 4aw0_A 189 -----------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227 (311)
T ss_dssp -----------------------------------------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 001125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH------HhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------iL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+....+. .....+++..+||.+||..||++|||++| |++||||+....
T Consensus 228 l~G~~PF~~~~~-~~~~~~i~~~~~~-~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 228 VAGLPPFRAGNE-GLIFAKIIKLEYD-FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp HHSSCSSCCSSH-HHHHHHHHHTCCC-CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HhCCCCCCCCCH-HHHHHHHHcCCCC-CCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence 99 7765443 3444444443321 11233456669999999999999999988 589999998643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=354.89 Aligned_cols=214 Identities=16% Similarity=0.110 Sum_probs=162.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++.+ ...+|++||| .|++|.++|++.+ .+++.+++.|++||+.||+|||++||||
T Consensus 99 ~E~~il~~l~HpnIV~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiH 173 (336)
T 4g3f_A 99 EELVACAGLSSPRIVPLYG-AVRE---GPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILH 173 (336)
T ss_dssp HHHHTTTTCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 5677899999999999988 5533 3467888888 5899999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||||+||||+.+| .+||+|||+++..........
T Consensus 174 RDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~-------------------------------------------- 209 (336)
T 4g3f_A 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS-------------------------------------------- 209 (336)
T ss_dssp SCCCGGGEEECTTSCCEEECCCTTCEEC----------------------------------------------------
T ss_pred cccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc--------------------------------------------
Confidence 99999999999887 699999999865422200000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
..+....+||+.|||||++.+..|+.++|||||||+|||
T Consensus 210 -----------------------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye 248 (336)
T 4g3f_A 210 -----------------------------------------LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248 (336)
T ss_dssp ---------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred -----------------------------------------eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence 000111579999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCC-chhhh-cCchhHHHHHHcCCCCCCCCCCHHHH-------------hcCcCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLP-PQLLL-KFPKEASFCLWLLHPEPSGRPKMGEL-------------LQSEFLN 326 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ei-------------L~hp~~~ 326 (712)
|++ ||...... ..+..+.....+ ...+. ..+...+||.+||..||.+|||+.|+ |+|||+.
T Consensus 249 mltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~ 327 (336)
T 4g3f_A 249 MLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKG 327 (336)
T ss_dssp HHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSS
T ss_pred HHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcC
Confidence 999 66543322 223333333222 12222 33455699999999999999999997 5799998
Q ss_pred CCcCc
Q 005147 327 EPRDS 331 (712)
Q Consensus 327 ~~~~~ 331 (712)
+...+
T Consensus 328 ~~~~P 332 (336)
T 4g3f_A 328 EYKEP 332 (336)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 76553
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=347.94 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=162.8
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
-.+|..+|+.++|||||++++ ++++ ...+|++||| .|++|.++|.+.+ .+++.+++.|++||+.||+|||++||
T Consensus 73 ~~~E~~il~~l~HpnIv~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~I 147 (304)
T 3ubd_A 73 TKMERDILVEVNHPFIVKLHY-AFQT---EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGI 147 (304)
T ss_dssp -----CCCCCCCCTTEECEEE-EEEE---TTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 345677899999999999888 5543 3467888888 5899999996544 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||||+|||++.+|.+||+|||+++......
T Consensus 148 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----------------------------------------------- 180 (304)
T 3ubd_A 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE----------------------------------------------- 180 (304)
T ss_dssp CCSSCCGGGEEECTTSCEEEESSEEEEC----------------------------------------------------
T ss_pred cCCCCCHHHeEEcCCCCEEecccccceeccCCC-----------------------------------------------
Confidence 999999999999999999999999985321110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......+||+.|||||++.+..|+.++|||||||+||
T Consensus 181 -------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 217 (304)
T 3ubd_A 181 -------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217 (304)
T ss_dssp -------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHH
Confidence 0001157999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||++ ||...... ..+..+....++ ......++..+||.+||+.||++||| ++|+++||||+...
T Consensus 218 emltG~~PF~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id 289 (304)
T 3ubd_A 218 EMLTGTLPFQGKDRK-ETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289 (304)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HHHhCCCCCCCcCHH-HHHHHHHcCCCC-CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence 9999 77655443 444444443322 12233456669999999999999998 58999999999764
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=360.08 Aligned_cols=218 Identities=14% Similarity=0.151 Sum_probs=165.8
Q ss_pred eccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+|..+|+.++|||||++++ ++.... ....+|++|||++++|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 101 ~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~~ 178 (398)
T 4b99_A 101 LRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQ 178 (398)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 36777899999999999988 443321 335789999999899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||||+|||++.+|.+|++|||+++.........
T Consensus 179 iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~------------------------------------------- 215 (398)
T 4b99_A 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH------------------------------------------- 215 (398)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCC--------------------------------------------------
T ss_pred CcCCCcCccccccCCCCCEEEeecceeeecccCcccc-------------------------------------------
Confidence 9999999999999999999999999986542210000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvl 261 (712)
.......+||++|||||++.+.. |+.++|||||||+
T Consensus 216 -------------------------------------------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~i 252 (398)
T 4b99_A 216 -------------------------------------------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 252 (398)
T ss_dssp -------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred -------------------------------------------ccccccceeChHhcCHHHhcCCCCCCChhheehhHHH
Confidence 00011268999999999988765 7999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc--CCC------------------------ch----hhhcCchhHHHHHHcCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR--VLP------------------------PQ----LLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~--~~~------------------------~~----~~~~~~~~~~li~~~L~~ 308 (712)
+|||++ ||.+.... ..+..+... ..+ .. +....+...+||.+||..
T Consensus 253 l~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~ 331 (398)
T 4b99_A 253 FGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 331 (398)
T ss_dssp HHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcC
Confidence 999999 66554433 222222111 000 00 112234556999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcCch
Q 005147 309 EPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.+|||+.|+|+||||+....+.
T Consensus 332 dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 332 EPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp STTTSCCHHHHTTSGGGTTTCCGG
T ss_pred ChhHCcCHHHHhcCHhhCcCCCCc
Confidence 999999999999999999876543
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=346.10 Aligned_cols=251 Identities=18% Similarity=0.215 Sum_probs=167.7
Q ss_pred ccccccccCCCCCcceeeeccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHH
Q 005147 8 GERFGVRGDDSNDFELRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECL 85 (712)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~~~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~ 85 (712)
++.++++--.......|..++..+|..+ +||||+++++ ++.+ .+.+|++|||+ |++|.++++ .+++.+++
T Consensus 49 ~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~-~~~~---~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~ 120 (361)
T 4f9c_A 49 EEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKY-CFRK---NDHVVIAMPYLEHESFLDILN----SLSFQEVR 120 (361)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSE-EEEE---TTEEEEEEECCCCCCHHHHHT----TCCHHHHH
T ss_pred CCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEE-EEEE---CCEEEEEEeCCCcccHHHHHc----CCCHHHHH
Confidence 4555555433333333444566677776 7999999888 5532 35678888885 899999983 38999999
Q ss_pred HHHHHHHHHHHHhhhcCceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhh
Q 005147 86 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (712)
Q Consensus 86 ~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (712)
.|++||+.||+|||++|||||||||+|||++.+ +.+||+|||+++........
T Consensus 121 ~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-------------------------- 174 (361)
T 4f9c_A 121 EYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-------------------------- 174 (361)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG--------------------------
T ss_pred HHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc--------------------------
Confidence 999999999999999999999999999999866 89999999999765433211
Q ss_pred hccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc
Q 005147 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (712)
Q Consensus 165 ~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (712)
..+|+.+...........+ +... .........+||++|||||++
T Consensus 175 ---~~~~~~~~~~~~~~~~~~~---------------------------~~~~------~~~~~~~~~~GT~~Y~APE~l 218 (361)
T 4f9c_A 175 ---LLKFVQSEAQQERCSQNKC---------------------------SICL------SRRQQVAPRAGTPGFRAPEVL 218 (361)
T ss_dssp ---GGGGC-----------------------------------------------------------CCCCGGGCCHHHH
T ss_pred ---ccccccccccccccccccc---------------------------cccc------cccccccccccCccccCHHHH
Confidence 0111111000000000000 0000 000011226899999999999
Q ss_pred cCCC-CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc---------------------cCCC-----------
Q 005147 245 AGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP----------- 288 (712)
Q Consensus 245 ~~~~-~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~---------------------~~~~----------- 288 (712)
.+.+ |+.++||||+||++|||++ ||+...+....+..+.. ...|
T Consensus 219 ~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 298 (361)
T 4f9c_A 219 TKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERL 298 (361)
T ss_dssp TTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHH
T ss_pred cCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhh
Confidence 8865 8999999999999999998 78765543333222210 0000
Q ss_pred ---------------------chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 289 ---------------------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 289 ---------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
..+....++..+||.+||+.||++|||++|+|+||||++.
T Consensus 299 ~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 299 RGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp C----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0011223445699999999999999999999999999875
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=328.44 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=155.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++.+ ..++++||| .||+|.++|......+++.+++.|+.||+.||+|||++||||
T Consensus 81 ~E~~il~~l~HpNIV~l~g-~~~~----~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiH 155 (307)
T 3omv_A 81 NEVAVLRKTRHVNILLFMG-YMTK----DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS----SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEC----CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 5666899999999999887 5532 346777777 589999999666566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........
T Consensus 156 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~----------------------------------------------- 188 (307)
T 3omv_A 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS----------------------------------------------- 188 (307)
T ss_dssp SCCCSSSEEEETTEEEEECCCSSCBC------------------------------------------------------
T ss_pred CccCHHHEEECCCCcEEEeeccCceecccCCcc-----------------------------------------------
Confidence 999999999999999999999998543111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll 262 (712)
......+||+.|||||++.+ .+|+.++|||||||+|
T Consensus 189 -----------------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl 227 (307)
T 3omv_A 189 -----------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227 (307)
T ss_dssp ----------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHH
Confidence 00011579999999999964 3599999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCch---hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||+| ||............+.....++. ... ..+...+|+.+||+.||++|||+.||++
T Consensus 228 ~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp HHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999 77655444444444444433322 222 2344559999999999999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=326.97 Aligned_cols=202 Identities=19% Similarity=0.188 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------------CCCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------------~~~l~~~~~~~i~~qil~ 93 (712)
+|..+|+.++|||||++++ +|.+ ...++++||| .||+|.++|.+. ...+++.+++.|+.||+.
T Consensus 64 ~E~~il~~l~HpnIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~ 139 (299)
T 4asz_A 64 REAELLTNLQHEHIVKFYG-VCVE---GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCccEEE-EEee---CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 5667899999999999988 5533 3467888887 599999999432 245999999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++|||||||||+||||+.++.+||+|||+++..... +.
T Consensus 140 gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~~-- 183 (299)
T 4asz_A 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------DY-- 183 (299)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------GC--
T ss_pred HHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------Cc--
Confidence 999999999999999999999999999999999998432111 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. .......||+.|||||++.+..|+.++
T Consensus 184 --------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~~k~ 211 (299)
T 4asz_A 184 --------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFTTES 211 (299)
T ss_dssp --------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCCHHH
T ss_pred --------------------------------e--------------------eecCceecChhhcCHHHHcCCCCCchh
Confidence 0 000114689999999999999999999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.+|++
T Consensus 212 DVwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 212 DVWSLGVVLWEIFTYGKQPWYQLSN-NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999997 6665443 3455555555444443344455669999999999999999999854
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=327.39 Aligned_cols=202 Identities=15% Similarity=0.141 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------------CCCChhHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qi 91 (712)
+|..+|+.++|||||++++ +|.+ ...++++||| .||+|.++|.+.. ..+++.+++.|+.||
T Consensus 92 ~E~~il~~l~HpnIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 167 (329)
T 4aoj_A 92 REAELLTMLQHQHIVRFFG-VCTE---GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167 (329)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHH
Confidence 5666899999999999988 5533 3467888887 5999999995432 348999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||+|||++|||||||||+||||+.++.+||+|||+++........
T Consensus 168 a~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~--------------------------------- 214 (329)
T 4aoj_A 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--------------------------------- 214 (329)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------------------------------------
T ss_pred HHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcc---------------------------------
Confidence 99999999999999999999999999999999999998543211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
......+||+.|||||++.+..|+.
T Consensus 215 -------------------------------------------------------~~~~~~~gt~~ymAPE~~~~~~~~~ 239 (329)
T 4aoj_A 215 -------------------------------------------------------RVGGRTMLPIRWMPPESILYRKFTT 239 (329)
T ss_dssp ------------------------------------------------------------CCCCGGGCCHHHHTTCCCCH
T ss_pred -------------------------------------------------------eecCcccccccccChhhhcCCCCCc
Confidence 0001146899999999999999999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 240 ~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 240 ESDVWSFGVVLWEIFTYGKQPWYQLSN-TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTCSSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred cccccchHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999997 6665443 3444455554444433344556669999999999999999999976
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=322.09 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=159.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+|..+++.++|||||++++ +|.+ ...+++++|| .+|+|.++|... ...+++.+++.|+.|
T Consensus 78 ~E~~il~~l~HpNIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 153 (308)
T 4gt4_A 78 HEAMLRARLQHPNVVCLLG-VVTK---DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153 (308)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcce-EEEE---CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHH
Confidence 4566899999999999998 5533 3467778777 599999999432 134899999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 154 ia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~----------------------------------~ 199 (308)
T 4gt4_A 154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA----------------------------------D 199 (308)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG----------------------------------G
T ss_pred HHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC----------------------------------C
Confidence 999999999999999999999999999999999999998532110 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. .......+||+.|||||++.+..|+
T Consensus 200 ~------------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~~s 225 (308)
T 4gt4_A 200 Y------------------------------------------------------YKLLGNSLLPIRWMAPEAIMYGKFS 225 (308)
T ss_dssp C------------------------------------------------------BCSSSSSCBCGGGCCHHHHHHCCCC
T ss_pred c------------------------------------------------------eeEecccccCCcccCHHHHhCCCCC
Confidence 0 0000114689999999999999999
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.||+++
T Consensus 226 ~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 226 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999997 6665443 34555555555544444444556699999999999999999999874
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=348.59 Aligned_cols=202 Identities=17% Similarity=0.163 Sum_probs=157.9
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
.+++.++|||||++++ +|.+ ...+|++||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|||||||
T Consensus 244 ~ll~~~~HP~IV~l~~-~f~~---~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDL 318 (689)
T 3v5w_A 244 SLVSTGDCPFIVCMSY-AFHT---PDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDL 318 (689)
T ss_dssp HHHSSSCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred HHHhhCCCCCEeEEEE-EEEE---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence 4567889999999888 5533 3467888888 5999999996544 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||||+.+|+|||+|||+++......
T Consensus 319 KPeNILld~~G~vKL~DFGlA~~~~~~~---------------------------------------------------- 346 (689)
T 3v5w_A 319 KPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------------------- 346 (689)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECSSCC----------------------------------------------------
T ss_pred chHHeEEeCCCCEEecccceeeecCCCC----------------------------------------------------
Confidence 9999999999999999999985432110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHhhC
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eLl~ 267 (712)
....+||+.|||||++.+ ..|+.++|||||||+||||++
T Consensus 347 ----------------------------------------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt 386 (689)
T 3v5w_A 347 ----------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 386 (689)
T ss_dssp ----------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 011579999999999975 569999999999999999999
Q ss_pred ---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 268 ---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 268 ---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||..... .......+.... +.......+...+||.+||..||.+|++ ++||++||||+...
T Consensus 387 G~~PF~~~~~~~~~~i~~~i~~~~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 387 GHSPFRQHKTKDKHEIDRMTLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp SSCTTCGGGCCCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred CCCCCCCCChHHHHHHHHhhcCCC-CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence 6643221 122222222221 1112233456669999999999999998 79999999998753
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=328.35 Aligned_cols=205 Identities=20% Similarity=0.226 Sum_probs=160.5
Q ss_pred ccceeeccCCC-CCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~ 89 (712)
+|..+|.++.| ||||++++ +|.. ...+++++||| .+|+|.++|++. ...+++.+++.|+.
T Consensus 116 ~E~~il~~l~hhpnIV~l~g-~~~~--~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 192 (353)
T 4ase_A 116 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192 (353)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECC--TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEEEE-EEEe--cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHH
Confidence 45567888866 89999988 5522 23457777777 599999999432 23489999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||+|||+++||||||||+|||++.++.+||+|||+++......
T Consensus 193 qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~--------------------------------- 239 (353)
T 4ase_A 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--------------------------------- 239 (353)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT---------------------------------
T ss_pred HHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC---------------------------------
Confidence 99999999999999999999999999999999999999996542210
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
++ .......||+.|||||++.+..|
T Consensus 240 ~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~~~y 264 (353)
T 4ase_A 240 DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 264 (353)
T ss_dssp TS-------------------------------------------------------EEETTEEECGGGCCHHHHHHCCC
T ss_pred Cc-------------------------------------------------------eeeccccccccccCHHHHhcCCC
Confidence 00 00111468999999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||+||||+| ||............+..+..++......+...+|+.+||+.||++|||+.+|++|
T Consensus 265 ~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999999999999999997 7765544444555555554444444445666799999999999999999999986
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=344.14 Aligned_cols=209 Identities=17% Similarity=0.236 Sum_probs=167.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ +|++ ...++++||| .||+|.++|......+++.+++.|++||+.||+|||++||+|
T Consensus 203 ~Ei~il~~l~hpnIv~l~~-~~~~---~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 203 KEIQTMSVLRHPTLVNLHD-AFED---DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEEC---SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4666789999999999888 5543 3467888887 589999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCC--CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++.+ +.+||+|||+++......
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------------------------------------- 311 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 311 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-----------------------------------------------
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCC-----------------------------------------------
Confidence 9999999999854 899999999985432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||++|||||++.+..|+.++|||||||+||
T Consensus 312 --------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily 347 (573)
T 3uto_A 312 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347 (573)
T ss_dssp --------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 001257999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++ ||...... ..+..+.... ++... ....+...+||.+||..||.+|||+.|+|+||||+....+
T Consensus 348 eml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 348 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence 9999 66654443 4444444432 23333 3344556699999999999999999999999999976553
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=315.55 Aligned_cols=226 Identities=13% Similarity=0.126 Sum_probs=156.0
Q ss_pred cccccccccCCCCC-cceeeeccceeeccCCCCCccccccccccccc-ccCceEEEEee-CCccHHHhhcCCCCCCChhH
Q 005147 7 RGERFGVRGDDSND-FELRKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYE 83 (712)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~ 83 (712)
+|+.++|+--.... ..+..+.+...+..++|||||++++ ++.++. ....++++||| .|++|.++|+.. .+++.+
T Consensus 25 ~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g-~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~ 101 (303)
T 3hmm_A 25 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEG 101 (303)
T ss_dssp TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHH
T ss_pred CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEE-EEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHH
Confidence 45566665433222 2234456666778899999999998 543332 33467888888 589999999554 389999
Q ss_pred HHHHHHHHHHHHHHhhhc--------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCC
Q 005147 84 CLHIFRQIVEIVYAAHSQ--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~--------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (712)
+..|+.||+.||+|||++ |||||||||+||||+.++.+||+|||+++........
T Consensus 102 ~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~----------------- 164 (303)
T 3hmm_A 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT----------------- 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------------
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------------
Confidence 999999999999999987 9999999999999999999999999998542111000
Q ss_pred CchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccC
Q 005147 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (712)
Q Consensus 156 ~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (712)
........+||
T Consensus 165 ---------------------------------------------------------------------~~~~~~~~~GT 175 (303)
T 3hmm_A 165 ---------------------------------------------------------------------IDIAPNHRVGT 175 (303)
T ss_dssp ---------------------------------------------------------------------ESCC-----CC
T ss_pred ---------------------------------------------------------------------eeeeccccccc
Confidence 00001125799
Q ss_pred ccccCcccccCC------CCCCccchHHHHHHHHHhhC--C-CC----------CC---h-hhHHHHHhhcccCCCchhh
Q 005147 236 NWYASPEELAGA------PVSCASDIYRLGVLLFELFC--P-FS----------TG---E-EKTRTMSSLRHRVLPPQLL 292 (712)
Q Consensus 236 ~~Y~aPE~~~~~------~~~~~sDIwSlGvll~eLl~--p-f~----------~~---~-~~~~~~~~~~~~~~~~~~~ 292 (712)
++|||||++.+. .|+.++|||||||+||||+| + |. .. . ........+......+.++
T Consensus 176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p 255 (303)
T 3hmm_A 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCC
Confidence 999999999764 36789999999999999998 2 21 10 0 1112222222222222222
Q ss_pred hcC------chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 293 LKF------PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 293 ~~~------~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..+ ....+|+.+||+.||++|||+.||++
T Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 111 23458999999999999999999976
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=295.41 Aligned_cols=208 Identities=15% Similarity=0.186 Sum_probs=162.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++... .+++.++..++.||+.||+|||++||+|
T Consensus 66 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (297)
T 3fxz_A 66 NEILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIH 139 (297)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhcCCCCCCCeEeE-EEEE---CCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 4556788899999999888 4432 3457788887 599999999544 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........
T Consensus 140 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 171 (297)
T 3fxz_A 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 171 (297)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEeeCCCceecCCccc------------------------------------------------
Confidence 99999999999999999999998744321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..++.++|||||||++|||
T Consensus 172 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 209 (297)
T 3fxz_A 172 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (297)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||......................... .+...+|+.+||..||.+|||+.|+|+||||+....
T Consensus 210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 99 666554443333333322222222223 344559999999999999999999999999987644
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=300.61 Aligned_cols=193 Identities=26% Similarity=0.463 Sum_probs=153.3
Q ss_pred eEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 57 FVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 57 ~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
++++||+ .|++|.+++..... ..++..++.|+.||+.||+|||++||+||||||+||+++.++.+||+|||+++..+
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 215 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence 6777777 58899999955432 24555689999999999999999999999999999999999999999999986543
Q ss_pred CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 005147 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (712)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (712)
....... .+ .
T Consensus 216 ~~~~~~~-----------------------------~~--------------~--------------------------- 225 (332)
T 3qd2_B 216 QDEEEQT-----------------------------VL--------------T--------------------------- 225 (332)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cchhhcc-----------------------------cc--------------c---------------------------
Confidence 3210000 00 0
Q ss_pred ccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhh
Q 005147 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLL 293 (712)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (712)
............||+.|+|||.+.+..++.++|||||||++|||++|+.+................+.....
T Consensus 226 --------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
T 3qd2_B 226 --------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQ 297 (332)
T ss_dssp --------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHH
T ss_pred --------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCccccc
Confidence 000000011257899999999999999999999999999999999999887777777777777777777777
Q ss_pred cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
..+...+||.+||..||.+|||+.++|+||||+.
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7788889999999999999999999999999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=308.81 Aligned_cols=233 Identities=15% Similarity=0.195 Sum_probs=162.3
Q ss_pred eccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+|..+. ||||+++++ ++.. .....+++++|+.+++|.++++.. .+++..+..++.||+.||+|||++||+
T Consensus 56 ~~E~~~l~~l~~h~niv~l~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~iv 131 (388)
T 3oz6_A 56 FREIMILTELSGHENIVNLLN-VLRA-DNDRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLL 131 (388)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEEC-TTSSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhccCCCCCCeeee-EEec-CCCCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 35666777776 999999988 4432 234578999999889999999553 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++.......... ...
T Consensus 132 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~~------------ 170 (388)
T 3oz6_A 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NIP------------ 170 (388)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CGG------------
T ss_pred eCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------ccc------------
Confidence 999999999999999999999999865432110000 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
....+... . + ..........+||++|+|||++.+ ..|+.++|||||||++|
T Consensus 171 ------------~~~~~~~~--~---~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 222 (388)
T 3oz6_A 171 ------------LSINENTE--N---F-----------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222 (388)
T ss_dssp ------------GCCC-------------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred ------------cccccccc--c---c-----------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHH
Confidence 00000000 0 0 000001122689999999999987 56999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCch--------------------------------hh-------------hcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------LL-------------LKF 295 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~--------------------------------~~-------------~~~ 295 (712)
||++ ||............+.....|.. +. ...
T Consensus 223 ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 3oz6_A 223 EILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302 (388)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC
Confidence 9999 66554433222221111111110 00 223
Q ss_pred chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 296 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+...+||.+||..||.+|||+.|+|+||||+....+
T Consensus 303 ~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 455699999999999999999999999999876543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=294.66 Aligned_cols=209 Identities=16% Similarity=0.195 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.|+.||+.||+|||++||+||
T Consensus 50 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~ 125 (292)
T 3o0g_A 50 REICLLKELKHKNIVRLHD-VLH---SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125 (292)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhcCCCCCEeeEEe-EEE---eCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 5667889999999999888 543 345789999998888988886555669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 126 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 156 (292)
T 3o0g_A 126 DLKPQNLLINRNGELKLANFGLARAFGIPVR------------------------------------------------- 156 (292)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCSCCS-------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEeecccceecCCccc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+.. ++.++|||||||++|+|
T Consensus 157 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 195 (292)
T 3o0g_A 157 -----------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_dssp -----------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHH
Confidence 001146799999999998776 89999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC--CC-c-------------------------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV--LP-P-------------------------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~--~~-~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||+........+..+.... .+ . ......+...+||.+||+.||++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (292)
T 3o0g_A 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275 (292)
T ss_dssp TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence 97 6554444333333322110 00 0 0011223445999999999999999
Q ss_pred CHHHHhcCcCCCCCc
Q 005147 315 KMGELLQSEFLNEPR 329 (712)
Q Consensus 315 t~~eiL~hp~~~~~~ 329 (712)
|+.|+|+||||+...
T Consensus 276 t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 276 SAEEALQHPYFSDFC 290 (292)
T ss_dssp CHHHHHTSGGGTTC-
T ss_pred CHHHHhcCcccccCC
Confidence 999999999999754
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=292.59 Aligned_cols=206 Identities=19% Similarity=0.235 Sum_probs=153.3
Q ss_pred eccCCCCCcccccccccccccc--cCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~--~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++..... ...+++++|+.+++|.+++.... ..+++.+++.|+.||+.||+|||++||+||||
T Consensus 68 l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dl 146 (308)
T 3g33_A 68 LEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 146 (308)
T ss_dssp HHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 33446999999988 5533322 22578999998889999995443 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+||+|||+++..+...
T Consensus 147 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------------- 174 (308)
T 3g33_A 147 KPENILVTSGGTVKLADFGLARIYSYQM---------------------------------------------------- 174 (308)
T ss_dssp CTTTEEECTTSCEEECSCSCTTTSTTCC----------------------------------------------------
T ss_pred CHHHEEEcCCCCEEEeeCccccccCCCc----------------------------------------------------
Confidence 9999999999999999999885432110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 175 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g 215 (308)
T 3g33_A 175 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215 (308)
T ss_dssp ---------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS
T ss_pred ---------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhccc-CCCc-----------------------hh-hhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHR-VLPP-----------------------QL-LLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~-~~~~-----------------------~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||................ ..+. .. ....+...+||.+||+.||.+|||+.|+|
T Consensus 216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 295 (308)
T 3g33_A 216 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295 (308)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence 665544332222211110 0000 00 11223445899999999999999999999
Q ss_pred cCcCCCCCc
Q 005147 321 QSEFLNEPR 329 (712)
Q Consensus 321 ~hp~~~~~~ 329 (712)
+||||+...
T Consensus 296 ~h~~~~~~~ 304 (308)
T 3g33_A 296 QHSYLHKDE 304 (308)
T ss_dssp TSTTC----
T ss_pred cCccccCCC
Confidence 999998753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-33 Score=299.66 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++.+ ...+++++|+. |++|.+++... ..+++.++..|+.||+.||.|||++||+|
T Consensus 64 ~E~~il~~l~hpnIv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH 138 (361)
T 2yab_A 64 REVSILRQVLHPNIITLHD-VYEN---RTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (361)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCCCcEEE-EEEe---CCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5566789999999999888 5533 34677888875 99999999554 35999999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 139 rDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~--------------------------------------------- 173 (361)
T 2yab_A 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--------------------------------------------- 173 (361)
T ss_dssp CCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC---------------------------------------------
T ss_pred CCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC---------------------------------------------
Confidence 99999999998776 79999999884432110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi 207 (361)
T 2yab_A 174 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207 (361)
T ss_dssp ----------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHH
Confidence 0011468999999999999899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||...... ..+..+.... +++..... .+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 208 l~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 280 (361)
T 2yab_A 208 TYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (361)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence 999998 66554333 3344443332 23333333 44556999999999999999999999999998654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=312.19 Aligned_cols=208 Identities=18% Similarity=0.224 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++.... ....+++++|+.+++|.+.+.. .+++.+++.|++||+.||+|||++||
T Consensus 110 ~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~i 185 (464)
T 3ttj_A 110 RELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 185 (464)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 5666889999999999998 554332 2356899999988889988843 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||+++..+...
T Consensus 186 iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------------------- 218 (464)
T 3ttj_A 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 218 (464)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCCCC-----CC-----------------------------------------------
T ss_pred ccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-----------------------------------------------
Confidence 999999999999999999999999985432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||++|+|||++.+..|+.++|||||||++|
T Consensus 219 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 254 (464)
T 3ttj_A 219 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254 (464)
T ss_dssp --------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHH
Confidence 001157899999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-CCC-c-----------------------hhhhc----------------CchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-VLP-P-----------------------QLLLK----------------FPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-~~~-~-----------------------~~~~~----------------~~~~~ 299 (712)
||++ ||....... .+..+... ..| + .+... .+...
T Consensus 255 ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 333 (464)
T 3ttj_A 255 EMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 333 (464)
T ss_dssp HHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHH
Confidence 9998 665543322 22211110 000 0 00000 23355
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.|+|+||||+....
T Consensus 334 dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 364 (464)
T 3ttj_A 334 DLLSKMLVIDPAKRISVDDALQHPYINVWYD 364 (464)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence 9999999999999999999999999996554
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=294.37 Aligned_cols=210 Identities=15% Similarity=0.206 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|..++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.+++||+.||+|||++||+||
T Consensus 68 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~ 143 (311)
T 3niz_A 68 REISLLKELHHPNIVSLID-VIH---SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR 143 (311)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---CSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHcCCCCEeeeee-EEc---cCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5666788899999999888 553 335789999998889999997666669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 144 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------- 174 (311)
T 3niz_A 144 DLKPQNLLINSDGALKLADFGLARAFGIPVR------------------------------------------------- 174 (311)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEETTSCCC-------------------------------------------------
T ss_pred CCchHhEEECCCCCEEEccCcCceecCCCcc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+. .++.++|||||||++|+|
T Consensus 175 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 213 (311)
T 3niz_A 175 -----------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213 (311)
T ss_dssp --------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHH
Confidence 00114679999999999774 589999999999999999
Q ss_pred hC---CCCCChhhHHH--HHhhcccCCCch--------------------------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||......... +........+.. .....+...+||.+||..||.+||
T Consensus 214 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 293 (311)
T 3niz_A 214 ITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI 293 (311)
T ss_dssp HHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSC
T ss_pred HhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCC
Confidence 98 66543332221 111111111110 011223455999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.|+|+||||+....
T Consensus 294 t~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 294 SARDAMNHPYFKDLDP 309 (311)
T ss_dssp CHHHHHTSGGGTTSCT
T ss_pred CHHHHhcCcccccCCc
Confidence 9999999999997643
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=298.29 Aligned_cols=205 Identities=17% Similarity=0.205 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 63 ~E~~~l~~l~hpnIv~l~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivH 137 (328)
T 3fe3_A 63 REVRIMKILNHPNIVKLFE-VIE---TEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVH 137 (328)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEE---ECCEEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 5666789999999999888 553 23467788887 4899999995543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 138 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------------- 168 (328)
T 3fe3_A 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGG------------------------------------------------- 168 (328)
T ss_dssp SCCCGGGEEECTTSCEEECSTTCCGGGSSSC-------------------------------------------------
T ss_pred cCCCHHHEEEcCCCCEEEeeccCceecCCCC-------------------------------------------------
Confidence 9999999999999999999999884321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC-CccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~sDIwSlGvll~e 264 (712)
.....+||++|+|||++.+..+. .++|||||||++|+
T Consensus 169 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e 206 (328)
T 3fe3_A 169 ------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206 (328)
T ss_dssp ------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHH
Confidence 00115689999999999888864 79999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||...... .....+....+.. .....+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 207 ll~g~~pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 207 LVSGSLPFDGQNLK-ELRERVLRGKYRI-PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCC-CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999 66554433 3333333332211 112345666999999999999999999999999998653
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=301.25 Aligned_cols=210 Identities=16% Similarity=0.254 Sum_probs=161.7
Q ss_pred eccceeeccCCCCCcccccccccccccc---cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~---~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.++..+|++++||||+++++ ++..... ...+++++|+.|++|.++++.. .+++..+..++.||+.||.|||++|
T Consensus 72 ~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~ 148 (367)
T 1cm8_A 72 YRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAG 148 (367)
T ss_dssp HHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 36677899999999999998 5543322 2467999999999999999553 4899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+||+|||+++..+..
T Consensus 149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----------------------------------------------- 181 (367)
T 1cm8_A 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----------------------------------------------- 181 (367)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCSS-----------------------------------------------
T ss_pred ccccCcCHHHEEEcCCCCEEEEeeecccccccc-----------------------------------------------
Confidence 999999999999999999999999988432111
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvl 261 (712)
....+||++|+|||++.+ ..++.++|||||||+
T Consensus 182 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 215 (367)
T 1cm8_A 182 ----------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI 215 (367)
T ss_dssp ----------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHH
Confidence 001468999999999987 569999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc--cCCC----------------------------chhhhcCchhHHHHHHcCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH--RVLP----------------------------PQLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~--~~~~----------------------------~~~~~~~~~~~~li~~~L~~ 308 (712)
+|||++ ||....... .+..+.. +..+ ..+....+...+||.+||..
T Consensus 216 l~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~ 294 (367)
T 1cm8_A 216 MAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL 294 (367)
T ss_dssp HHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCS
T ss_pred HHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccC
Confidence 999999 665443322 2221111 0011 01112244566999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcCch
Q 005147 309 EPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.+|||+.++|+||||+......
T Consensus 295 dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 295 DAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp STTTSCCHHHHHHSGGGTTTC---
T ss_pred ChhHCCCHHHHhcChHHHhhcCCc
Confidence 999999999999999999876543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-33 Score=292.74 Aligned_cols=197 Identities=21% Similarity=0.267 Sum_probs=156.4
Q ss_pred cCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
...||||+.+++ ++. ....+++++|+.+++|.+++...+..+++.+++.|+.||+.||+|||++||+||||||+||
T Consensus 113 ~~~h~~iv~l~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI 188 (311)
T 3p1a_A 113 VGQHPCCVRLEQ-AWE---EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANI 188 (311)
T ss_dssp HCCCTTBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred hcCCCcEEEEEE-EEE---eCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHE
Confidence 349999999888 553 3457899999999999999966556699999999999999999999999999999999999
Q ss_pred eecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
|++.++.+||+|||++...+...
T Consensus 189 ll~~~~~~kl~DFG~a~~~~~~~--------------------------------------------------------- 211 (311)
T 3p1a_A 189 FLGPRGRCKLGDFGLLVELGTAG--------------------------------------------------------- 211 (311)
T ss_dssp EECGGGCEEECCCTTCEECC------------------------------------------------------------
T ss_pred EECCCCCEEEccceeeeecccCC---------------------------------------------------------
Confidence 99999999999999874432210
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCCh
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 273 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~ 273 (712)
......||+.|+|||++.+ .++.++|||||||++|||+++.....
T Consensus 212 ----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 212 ----------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp -------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred ----------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0011458999999999876 69999999999999999998322111
Q ss_pred hhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 274 EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.. .....+.....++.+....+ ...+||.+||..||.+|||+.++|+||||+.
T Consensus 257 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 257 GG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp SH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred Cc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 11 22344455555655554444 4459999999999999999999999999986
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-32 Score=296.17 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 97 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH 171 (349)
T 2w4o_A 97 TEIGVLLRLSHPNIIKLKE-IFET---PTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIVH 171 (349)
T ss_dssp --CHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCcceee-eEec---CCeEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4556788899999999888 5532 3456777777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++. ++.+||+|||+++......
T Consensus 172 ~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 205 (349)
T 2w4o_A 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------------------------------------------- 205 (349)
T ss_dssp CCCCGGGEEESSSSTTCCEEECCCC-------------------------------------------------------
T ss_pred cCCCcccEEEecCCCCCCEEEccCccccccCccc----------------------------------------------
Confidence 999999999975 7899999999884321110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 240 (349)
T 2w4o_A 206 ---------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240 (349)
T ss_dssp ----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH
Confidence 00014689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||............+..... +.. .....+...+||.+||..||++|||+.++|+||||.....
T Consensus 241 ~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 241 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 99998 66655444334444433322 112 2233445569999999999999999999999999997654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-33 Score=297.31 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=162.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 50 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH 125 (321)
T 1tki_A 50 KEISILNIARHRNILHLHE-SFES---MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp HHHHHHHHSCCTTBCCEEE-EEEE---TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEeE-EEec---CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 4556788899999999888 5532 3457777777 588999999666556999999999999999999999999999
Q ss_pred ccCCCCceeecC--CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~--~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+||+++. ++.+|++|||++.......
T Consensus 126 ~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 158 (321)
T 1tki_A 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------------------------------------- 158 (321)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred CCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-----------------------------------------------
Confidence 999999999986 7899999999884431110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 194 (321)
T 1tki_A 159 --------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194 (321)
T ss_dssp --------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC--Cchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|++ ||...... ..+..+..... +.... ...+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 195 ~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 195 VLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 9998 66654443 33333333322 22222 3345556999999999999999999999999998653
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-33 Score=308.09 Aligned_cols=241 Identities=16% Similarity=0.225 Sum_probs=160.4
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++||||+++++ ++... .....+|+++|+.+++|.+++.... .+++..++.|+.||+.||+|||++|||
T Consensus 101 ~E~~~l~~l~h~niv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ii 178 (458)
T 3rp9_A 101 REIAILNRLNHDHVVKVLD-IVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAGIL 178 (458)
T ss_dssp HHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcC
Confidence 5677889999999999998 44322 3335789999999999999996554 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++..+........ .+..+ .. .++
T Consensus 179 HrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~--------~~~~~-------~~-----~~~------------- 225 (458)
T 3rp9_A 179 HRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ--------LPISP-------RE-----DDM------------- 225 (458)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC--------CC---------------------------------
T ss_pred CCCCChhhEEECCCCCEeecccccchhccCccccccc--------cccCc-------cc-----ccc-------------
Confidence 9999999999999999999999999765433110000 00000 00 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll~ 263 (712)
...+++.+. .........+||++|+|||++ .+..|+.++|||||||+||
T Consensus 226 ----------------------~~~~~~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ 275 (458)
T 3rp9_A 226 ----------------------NLVTFPHTK--------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA 275 (458)
T ss_dssp -------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred ----------------------ccccccccc--------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHH
Confidence 000000000 000011236899999999986 4556999999999999999
Q ss_pred HhhC-------------CCCCChh--------------------hHHHHHhhcc--cC--------------------C-
Q 005147 264 ELFC-------------PFSTGEE--------------------KTRTMSSLRH--RV--------------------L- 287 (712)
Q Consensus 264 eLl~-------------pf~~~~~--------------------~~~~~~~~~~--~~--------------------~- 287 (712)
||++ |+++... ....+..+.. +. .
T Consensus 276 elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 355 (458)
T 3rp9_A 276 ELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP 355 (458)
T ss_dssp HHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSC
T ss_pred HHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcC
Confidence 9995 2221111 0011111000 00 0
Q ss_pred -------CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 288 -------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 288 -------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
...+....+...+||.+||..||.+|||+.|+|+||||+......
T Consensus 356 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~ 407 (458)
T 3rp9_A 356 KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE 407 (458)
T ss_dssp CCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence 011122245566999999999999999999999999999876543
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-32 Score=295.40 Aligned_cols=219 Identities=15% Similarity=0.203 Sum_probs=163.7
Q ss_pred ccceeeccCCCCCcccccccccccccc-----cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~-----~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+|..++||||+++++ ++..... ...+++++|+.+++|.+.+......+++.+++.|+.||+.||+|||++
T Consensus 65 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 143 (351)
T 3mi9_A 65 REIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143 (351)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 5667888999999999988 5543322 456899999988899998876666699999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 144 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 180 (351)
T 3mi9_A 144 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS------------------------------------------- 180 (351)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS-------------------------------------------
T ss_pred CeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc-------------------------------------------
Confidence 9999999999999999999999999998544221000
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (712)
.+.......||++|+|||++.+. .++.++|||||||
T Consensus 181 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 217 (351)
T 3mi9_A 181 -------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217 (351)
T ss_dssp -------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred -------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHH
Confidence 00000114689999999999764 4899999999999
Q ss_pred HHHHhhC---CCCCChhhHH--HHHhhcccCCCchhhh----------------------------cCchhHHHHHHcCC
Q 005147 261 LLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL----------------------------KFPKEASFCLWLLH 307 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~L~ 307 (712)
++|+|++ ||........ .+........+..+.. ..+...+||.+||.
T Consensus 218 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 297 (351)
T 3mi9_A 218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 297 (351)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhc
Confidence 9999999 5554433221 1122211111111100 13345699999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.||++|||+.|+|+||||+....+.
T Consensus 298 ~dP~~R~t~~e~l~hp~f~~~~~~~ 322 (351)
T 3mi9_A 298 LDPAQRIDSDDALNHDFFWSDPMPS 322 (351)
T ss_dssp SSGGGSCCHHHHHTSGGGGSSSCCC
T ss_pred CChhhCCCHHHHhCCCCcCCCCCcc
Confidence 9999999999999999998765543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=288.01 Aligned_cols=208 Identities=17% Similarity=0.235 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 124 (288)
T 1ob3_A 49 REISILKELKHSNIVKLYD-VIH---TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124 (288)
T ss_dssp HHHHGGGGCCCTTBCCEEE-EEE---CSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhcCCCCEeeeee-EEc---cCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5666889999999999888 443 235789999998889999997665669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 155 (288)
T 1ob3_A 125 DLKPQNLLINREGELKIADFGLARAFGIPVR------------------------------------------------- 155 (288)
T ss_dssp CCCGGGEEECTTSCEEECCTTHHHHHCC----------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEeECccccccCcccc-------------------------------------------------
Confidence 9999999999999999999998843221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+. .++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 194 (288)
T 1ob3_A 156 -----------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194 (288)
T ss_dssp -----------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHH
Confidence 00114679999999999765 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--cC----CC---------c-----------hh-hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--RV----LP---------P-----------QL-LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--~~----~~---------~-----------~~-~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||............... .. .+ + .. ....+...+||.+||..||++|||
T Consensus 195 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 274 (288)
T 1ob3_A 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274 (288)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence 98 66554433222222110 00 00 0 00 112234459999999999999999
Q ss_pred HHHHhcCcCCCCC
Q 005147 316 MGELLQSEFLNEP 328 (712)
Q Consensus 316 ~~eiL~hp~~~~~ 328 (712)
+.|+|+||||+..
T Consensus 275 ~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 275 AKQALEHAYFKEN 287 (288)
T ss_dssp HHHHHTSGGGGC-
T ss_pred HHHHhcCcchhhc
Confidence 9999999999863
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=291.61 Aligned_cols=206 Identities=18% Similarity=0.259 Sum_probs=160.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 63 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH 137 (326)
T 2y0a_A 63 REVSILKEIQHPNVITLHE-VYEN---KTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAH 137 (326)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 5566788999999999888 5532 3456777777 589999999554 45999999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .+||+|||++.......
T Consensus 138 ~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 172 (326)
T 2y0a_A 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--------------------------------------------- 172 (326)
T ss_dssp CCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS---------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC---------------------------------------------
Confidence 99999999998877 79999999884431110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 173 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 206 (326)
T 2y0a_A 173 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206 (326)
T ss_dssp ----------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHH
Confidence 0001468999999999998899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc--CCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||...... ..+..+... ..+.... ...+...+||.+||..||.+|||+.++|+||||+...
T Consensus 207 l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 279 (326)
T 2y0a_A 207 TYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279 (326)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred HHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence 999998 66544332 223333222 2233332 3344555999999999999999999999999998754
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.7e-33 Score=305.37 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=161.9
Q ss_pred eccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|..++||||+++++ ++.... ....+|+++|+.+++|.++++... .+++.+++.|+.||+.||.|||++||
T Consensus 73 ~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~gi 150 (432)
T 3n9x_A 73 LREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHESGI 150 (432)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36777899999999999988 443321 225789999999999999996543 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||+++........... .++.-..
T Consensus 151 vHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~-------- 195 (432)
T 3n9x_A 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENE-------- 195 (432)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEEC---------------------------------------------------
T ss_pred CCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------ccccccc--------
Confidence 99999999999999999999999999654332100000 0000000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll 262 (712)
. ...............+||++|+|||++ .+..|+.++|||||||++
T Consensus 196 --~-------------------------------~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il 242 (432)
T 3n9x_A 196 --E-------------------------------PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF 242 (432)
T ss_dssp ------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --c-------------------------------ccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHH
Confidence 0 000000000011236899999999986 455699999999999999
Q ss_pred HHhhC-------------CCCCChh-----------------hHHHHHhhc------------------------c--cC
Q 005147 263 FELFC-------------PFSTGEE-----------------KTRTMSSLR------------------------H--RV 286 (712)
Q Consensus 263 ~eLl~-------------pf~~~~~-----------------~~~~~~~~~------------------------~--~~ 286 (712)
|||++ |+++... ....+..+. . ..
T Consensus 243 ~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 322 (432)
T 3n9x_A 243 AELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHR 322 (432)
T ss_dssp HHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred HHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCC
Confidence 99995 2222211 001110000 0 00
Q ss_pred CCc----hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHH
Q 005147 287 LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334 (712)
Q Consensus 287 ~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e 334 (712)
.+. .+....+...+||.+||..||.+|||+.|+|+||||+.......+
T Consensus 323 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 323 KPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 010 012234556699999999999999999999999999988665443
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=289.01 Aligned_cols=205 Identities=15% Similarity=0.195 Sum_probs=156.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ .....+++++|+ .+++|.+++.. ..+++.+++.++.||+.||+|||++||+|
T Consensus 85 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 160 (298)
T 2zv2_A 85 QEIAILKKLDHPNVVKLVE-VLDD-PNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKIIH 160 (298)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC-SSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc-CCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4566788999999999888 5533 234567777777 58899887633 34999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 192 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA------------------------------------------------ 192 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSC------------------------------------------------
T ss_pred cCCCHHHEEECCCCCEEEecCCCccccccccc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
......||+.|+|||.+.+.. ++.++|||||||++
T Consensus 193 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 193 ------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 000146899999999997765 47889999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|+|++ ||...... .....+.....+ +......+...+||.+||..||.+|||+.|+|+||||+
T Consensus 231 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 231 YCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 99998 66554332 222333322222 22223345566999999999999999999999999986
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-32 Score=290.61 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=159.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++||||+++++ ++.+ ...++++||+ .|++|.+++.+.. .+++..++.++.||+.||+|||++||+||
T Consensus 56 E~~~l~~l~hp~Iv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 130 (318)
T 1fot_A 56 ERLMLSIVTHPFIIRMWG-TFQD---AQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIYR 130 (318)
T ss_dssp HHHHHHSCCBTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred HHHHHhhCCCCCCceEeE-EEEe---CCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 455788899999999888 5532 3467788887 5899999996543 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.+|.+||+|||+++.....
T Consensus 131 Dlkp~NIll~~~g~~kL~Dfg~a~~~~~~--------------------------------------------------- 159 (318)
T 1fot_A 131 DLKPENILLDKNGHIKITDFGFAKYVPDV--------------------------------------------------- 159 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEECSSC---------------------------------------------------
T ss_pred CCChheEEEcCCCCEEEeecCcceecCCc---------------------------------------------------
Confidence 99999999999999999999988432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 160 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 197 (318)
T 1fot_A 160 ------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197 (318)
T ss_dssp ------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH
Confidence 00146899999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||...... ..+..+...... ......+...++|.+||..||.+|| +++++++||||+...
T Consensus 198 ~g~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~ 266 (318)
T 1fot_A 198 AGYTPFYDSNTM-KTYEKILNAELR-FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266 (318)
T ss_dssp HSSCTTCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred hCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence 8 66554433 333333332211 1112334566999999999999999 899999999998753
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-32 Score=291.81 Aligned_cols=211 Identities=14% Similarity=0.173 Sum_probs=159.4
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.++..+|+.+.||||+++++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 123 (324)
T 3mtl_A 48 IREVSLLKDLKHANIVTLHD-IIH---TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123 (324)
T ss_dssp CCCHHHHSCCCCTTBCCEEE-EEE---CSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHhcCCCCCCeeee-EEe---eCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 35677889999999999888 543 34568999999888999999666666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++...+....
T Consensus 124 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 155 (324)
T 3mtl_A 124 RDLKPQNLLINERGELKLADFGLARAKSIPTK------------------------------------------------ 155 (324)
T ss_dssp SSCCGGGEEECTTCCEEECSSSEEECC-----------------------------------------------------
T ss_pred CCcCHHHEEECCCCCEEEccCcccccccCCcc------------------------------------------------
Confidence 99999999999999999999998853321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......||++|+|||++.+ ..++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 193 (324)
T 3mtl_A 156 ------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE 193 (324)
T ss_dssp -------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence 0001467999999999977 458999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc--ccCCCch--------------------------hhhcCchhHHHHHHcCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLR--HRVLPPQ--------------------------LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~--~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R 313 (712)
|++ ||.............. ....+.. .....+...+||.+||+.||.+|
T Consensus 194 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 273 (324)
T 3mtl_A 194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR 273 (324)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence 999 6655443322211111 1110000 01123445699999999999999
Q ss_pred CCHHHHhcCcCCCCCcC
Q 005147 314 PKMGELLQSEFLNEPRD 330 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~ 330 (712)
||+.|+|+||||.....
T Consensus 274 ~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 274 ISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp CCHHHHTTSGGGGGGCS
T ss_pred CCHHHHhcChhhhhccc
Confidence 99999999999987654
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=298.50 Aligned_cols=209 Identities=15% Similarity=0.201 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccc---cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~---~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++... .....+++++++.|++|.+++.. ..+++.+++.++.||+.||.|||++||
T Consensus 77 ~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~gi 153 (367)
T 2fst_X 77 RELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADI 153 (367)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5667889999999999998 55332 12356899999999999999854 349999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||+++..+..
T Consensus 154 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------------------------------------ 185 (367)
T 2fst_X 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE------------------------------------------------ 185 (367)
T ss_dssp CCCCCCGGGEEECTTCCEEECC----------------------------------------------------------
T ss_pred eeCCCCHhhEEECCCCCEEEeecccccccccc------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
....+||++|+|||++.+ ..++.++|||||||++
T Consensus 186 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 220 (367)
T 2fst_X 186 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220 (367)
T ss_dssp --------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHH
Confidence 011468999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc--CC-----------------------C-c----hhhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR--VL-----------------------P-P----QLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~--~~-----------------------~-~----~~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||....... .+..+... .. + . .+....+...+||.+||..|
T Consensus 221 ~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d 299 (367)
T 2fst_X 221 AELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299 (367)
T ss_dssp HHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSS
T ss_pred HHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCC
Confidence 99999 665543322 22111110 00 0 0 01122345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCch
Q 005147 310 PSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
|.+|||+.++|+||||+....+.
T Consensus 300 P~~R~t~~e~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 300 SDKRITAAQALAHAYFAQYHDPD 322 (367)
T ss_dssp GGGSCCHHHHHTSGGGTTTCCGG
T ss_pred cccCcCHHHHhcChhhhhccCCC
Confidence 99999999999999999876644
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=291.26 Aligned_cols=206 Identities=19% Similarity=0.259 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...++++||+ .|++|.+++.+. +.+++.+++.++.||+.||+|||++||+|
T Consensus 54 ~E~~~l~~l~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 128 (337)
T 1o6l_A 54 TESRVLQNTRHPFLTALKY-AFQT---HDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVY 128 (337)
T ss_dssp HHHHHHHSCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCcCcceEE-EEEe---CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4455788899999999888 4432 3467778887 588999999543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.......
T Consensus 129 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~------------------------------------------------ 160 (337)
T 1o6l_A 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------------ 160 (337)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCSCCTTC------------------------------------------------
T ss_pred CcCCHHHEEECCCCCEEEeeccchhhcccCCC------------------------------------------------
Confidence 99999999999999999999998853211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 161 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 198 (337)
T 1o6l_A 161 ------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198 (337)
T ss_dssp ------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+|| ++.++++||||....
T Consensus 199 l~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~ 268 (337)
T 1o6l_A 199 MCGRLPFYNQDHE-RLFELILMEEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268 (337)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence 98 66654433 333333222111 1112345566999999999999999 899999999998753
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-33 Score=296.84 Aligned_cols=205 Identities=17% Similarity=0.189 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++|+.+++|.+++...+ .+++.+++.++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpnIv~l~~-~~~~---~~~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~ 132 (336)
T 3h4j_B 58 REISYLKLLRHPHIIKLYD-VITT---PTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHR 132 (336)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 5566788999999999888 5533 34688999999999999985443 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++.......
T Consensus 133 Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-------------------------------------------------- 162 (336)
T 3h4j_B 133 DLKPENLLLDDNLNVKIADFGLSNIMTDGN-------------------------------------------------- 162 (336)
T ss_dssp CCSTTTEEECTTCCEEECCSSCTBTTTTSB--------------------------------------------------
T ss_pred CCchhhEEEcCCCCEEEEEeccceeccCCc--------------------------------------------------
Confidence 999999999999999999999884321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..+ +.++|||||||++|+|
T Consensus 163 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 201 (336)
T 3h4j_B 163 -----------------------------------------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVM 201 (336)
T ss_dssp -----------------------------------------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHH
Confidence 0011468999999999988875 7899999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+..... .......+...+||.+||..||.+|||+.|+++||||+...
T Consensus 202 l~g~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 266 (336)
T 3h4j_B 202 LVGRLPFDDEFIP-NLFKKVNSCVY-VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNL 266 (336)
T ss_dssp HHSSCSSBCSSST-TCBCCCCSSCC-CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred HhCCCCCCCccHH-HHHHHHHcCCC-CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCC
Confidence 98 55432211 11111111111 11112334556999999999999999999999999998653
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=284.29 Aligned_cols=207 Identities=14% Similarity=0.171 Sum_probs=163.7
Q ss_pred ccceeeccCCCCCcccccccccc-cccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
++..+|+.+.||||+++++ ++. .......+++++|+. +++|.+++... ..+++..++.|+.||+.||.|||++|
T Consensus 74 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~ 151 (290)
T 1t4h_A 74 EEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHhCCCCCeeeeee-eeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3556788899999999988 443 233345678888885 88999999543 34899999999999999999999999
Q ss_pred ceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 IvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|+||||||+||+++ .++.++|+|||++......
T Consensus 152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (290)
T 1t4h_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---------------------------------------------- 185 (290)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT----------------------------------------------
T ss_pred EEECCCCHHHEEEECCCCCEEEeeCCCccccccc----------------------------------------------
Confidence 99999999999998 7889999999987422111
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+ .++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~ 218 (290)
T 1t4h_A 186 ----------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 218 (290)
T ss_dssp ----------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHH
Confidence 0011468999999998864 59999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||............+.....+....... +...+||.+||..||.+|||+.++|+||||++.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 219 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 999998 7766555555566666665555554444 455699999999999999999999999999863
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=294.68 Aligned_cols=206 Identities=19% Similarity=0.225 Sum_probs=158.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++ ++.+ ...++++||+ .|++|.+++.. .+..+++.++..|+.||+.||+|||++|
T Consensus 75 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 150 (351)
T 3c0i_A 75 REASICHMLKHPHIVELLE-TYSS---DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150 (351)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4556788899999999888 5533 3457778877 58999988832 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 103 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|+||||||+||+++.++. +|++|||++...+....
T Consensus 151 ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~------------------------------------------ 188 (351)
T 3c0i_A 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL------------------------------------------ 188 (351)
T ss_dssp EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC------------------------------------------
T ss_pred ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe------------------------------------------
Confidence 999999999999986654 99999998854322100
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.....+||++|+|||++.+..++.++||||||
T Consensus 189 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 220 (351)
T 3c0i_A 189 ------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG 220 (351)
T ss_dssp ------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHHHH
Confidence 00114689999999999999999999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|+|++ ||..... .....+....+ ++.. ....+...+||.+||..||.+|||+.++|+||||+..
T Consensus 221 ~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 221 VILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 99999999 6655432 23333333322 2222 2334455699999999999999999999999999753
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=295.50 Aligned_cols=205 Identities=19% Similarity=0.212 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+|
T Consensus 77 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 151 (362)
T 2bdw_A 77 REARICRKLQHPNIVRLHD-SIQE---ESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVH 151 (362)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4666788899999999888 5532 3456777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 152 ~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~---------------------------------------------- 185 (362)
T 2bdw_A 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------------------------------------------- 185 (362)
T ss_dssp CCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------------------------------------
T ss_pred ccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------------------------------------
Confidence 99999999998654 59999999885432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 186 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 220 (362)
T 2bdw_A 186 ---------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220 (362)
T ss_dssp ---------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 00014689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+.... ++.. +....+...+||.+||..||.+|||+.++|+||||...
T Consensus 221 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 221 YILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999 66544332 3333333332 2222 23334556699999999999999999999999999753
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=290.39 Aligned_cols=210 Identities=15% Similarity=0.189 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC-----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++ ++.. ...+++++|+.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 52 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 127 (317)
T 2pmi_A 52 REISLMKELKHENIVRLYD-VIHT---ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127 (317)
T ss_dssp HHHHHHTTCCBTTBCCEEE-EECC---TTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCcceEEE-EEEE---CCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4566789999999999888 5432 3568899999888999998322 23489999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.+||+|||++...+....
T Consensus 128 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------- 163 (317)
T 2pmi_A 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-------------------------------------------- 163 (317)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC--------------------------------------------
T ss_pred CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc--------------------------------------------
Confidence 999999999999999999999999998854322100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (712)
......||+.|+|||++.+. .++.++|||||||
T Consensus 164 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 197 (317)
T 2pmi_A 164 ----------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGC 197 (317)
T ss_dssp ----------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHH
Confidence 00014679999999999764 5899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcc--cCCC----------------------ch--------h-hhcCchhHHHHHH
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRH--RVLP----------------------PQ--------L-LLKFPKEASFCLW 304 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~--~~~~----------------------~~--------~-~~~~~~~~~li~~ 304 (712)
++|||++ ||........ ...+.. +..+ .. . ....+...+||.+
T Consensus 198 il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 276 (317)
T 2pmi_A 198 ILAEMITGKPLFPGTNDEEQ-LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHG 276 (317)
T ss_dssp HHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHH
Confidence 9999998 6655443322 211111 0000 00 0 0122345599999
Q ss_pred cCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 305 LLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 305 ~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||..||.+|||+.|+|+||||+.....
T Consensus 277 ~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 277 LLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred HCCCCcccCCCHHHHhCChhhhcccch
Confidence 999999999999999999999987654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=302.00 Aligned_cols=205 Identities=18% Similarity=0.216 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.++..+++||+.||.|||++||+|
T Consensus 59 ~E~~il~~l~hpnIv~l~~-~~~---~~~~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~givH 133 (444)
T 3soa_A 59 REARICRLLKHPNIVRLHD-SIS---EEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVH 133 (444)
T ss_dssp HHHHHHHHCCBTTBCCEEE-EEE---CSSEEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCcCCCeEEE-EEE---ECCEEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5666788999999999888 553 33466777777 5889999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++ .++.+||+|||++........
T Consensus 134 rDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~--------------------------------------------- 168 (444)
T 3soa_A 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--------------------------------------------- 168 (444)
T ss_dssp CCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC---------------------------------------------
T ss_pred cCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc---------------------------------------------
Confidence 99999999998 457899999998854322100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 169 ---------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil 203 (444)
T 3soa_A 169 ---------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203 (444)
T ss_dssp ---------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHHHHH
Confidence 00114689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|+|++ ||..... ......+....+ +. .+....+...+||.+||..||.+|||+.|+|+||||+.
T Consensus 204 yell~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 204 YILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHSSCSCCCSSH-HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHhCCCCCCCccH-HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999 6654433 333444443322 22 22334456669999999999999999999999999974
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=291.61 Aligned_cols=210 Identities=13% Similarity=0.142 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+. |++|.+++.... .+++.+++.|+.||+.||+|||++||+|
T Consensus 54 ~E~~~l~~l~hpnIv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~givH 128 (323)
T 3tki_A 54 KEICINKMLNHENVVKFYG-HRR---EGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (323)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEe---cCCeEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 543 234567777774 889999996543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 129 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------- 161 (323)
T 3tki_A 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRE----------------------------------------------- 161 (323)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----------------------------------------------
T ss_pred cccchHHEEEeCCCCEEEEEeeccceeccCCcc-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.......||+.|+|||++.+..+ +.++|||||||++|+
T Consensus 162 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 200 (323)
T 3tki_A 162 -----------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 200 (323)
T ss_dssp -----------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHH
Confidence 00011468999999999988775 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhccc-CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||................ ...+......+...+||.+||..||.+|||+.|+++||||+...
T Consensus 201 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 999 665444332333333222 22222333445566999999999999999999999999998654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=299.32 Aligned_cols=215 Identities=16% Similarity=0.144 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|..+.||||+.+++ ++. ......+++++|+.+++|.+++.. ....+++.+++.|++||+.||.||
T Consensus 67 ~E~~~l~~l~hpniv~~~~-~~~-~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 144 (405)
T 3rgf_A 67 REIALLRELKHPNVISLQK-VFL-SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144 (405)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EEE-ETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeeEee-EEe-cCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 5667889999999999988 442 223457899999998999998831 122489999999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+|||+ +..+.+||+|||+++..+..... .
T Consensus 145 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 189 (405)
T 3rgf_A 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 189 (405)
T ss_dssp HHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--------------------------------------------
T ss_pred HhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c---
Confidence 99999999999999999 67789999999998543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~s 253 (712)
......+||++|+|||++.+.. ++.++
T Consensus 190 ----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 217 (405)
T 3rgf_A 190 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 217 (405)
T ss_dssp -----------------------------------------------------------CCCTTCCHHHHTTCCSCCHHH
T ss_pred ----------------------------------------------------ccCCCceecCcccCchhhcCCCcccchh
Confidence 0001157899999999998754 99999
Q ss_pred chHHHHHHHHHhhC---CCCCChhh--------HHHHHhhc---ccCCCchh----------------------------
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLR---HRVLPPQL---------------------------- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~--------~~~~~~~~---~~~~~~~~---------------------------- 291 (712)
|||||||++|||++ ||...... ...+..+. .......+
T Consensus 218 DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (405)
T 3rgf_A 218 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 297 (405)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHH
T ss_pred hhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhh
Confidence 99999999999998 56433221 01111110 00000000
Q ss_pred ------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 292 ------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 292 ------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
....+...+||.+||..||.+|||+.|+|+||||.....
T Consensus 298 ~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL 342 (405)
T ss_dssp HHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred hHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence 001344559999999999999999999999999987644
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-32 Score=295.82 Aligned_cols=208 Identities=19% Similarity=0.271 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.+++.++.||+.||+|||++||+|
T Consensus 97 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 172 (387)
T 1kob_A 97 NEISIMNQLHHPKLINLHD-AFED---KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172 (387)
T ss_dssp HHHHHHTTCCSTTBCCEEE-EEEC---SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCCCeEEE-EEEe---CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 4566788999999999888 5532 3457777777 589999999766656999999999999999999999999999
Q ss_pred ccCCCCceeecC--CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~--~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++. .+.+||+|||++........
T Consensus 173 rDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~---------------------------------------------- 206 (387)
T 1kob_A 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---------------------------------------------- 206 (387)
T ss_dssp CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC----------------------------------------------
T ss_pred cccchHHeEEecCCCCceEEEecccceecCCCcc----------------------------------------------
Confidence 999999999974 46799999998854321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 207 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 241 (387)
T 1kob_A 207 ---------------------------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241 (387)
T ss_dssp ---------------------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHH
Confidence 01146899999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||...... ..+..+.... .+.. +....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 242 elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 242 VLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999 66554433 3333333222 2222 2233455669999999999999999999999999987543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-32 Score=293.02 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=162.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.+.||||+++++ ++.. ...+++++|+..++|.+++......+++.++..++.||+.||.|||++||+||
T Consensus 103 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 178 (348)
T 1u5q_A 103 KEVRFLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178 (348)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 4556788899999999888 5432 35688999998889999885444569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++......
T Consensus 179 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--------------------------------------------------- 207 (348)
T 1u5q_A 179 DVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------------------------------- 207 (348)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeeccCceecCCC---------------------------------------------------
Confidence 99999999999999999999988432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....||+.|+|||++. +..++.++|||||||++|
T Consensus 208 -------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 244 (348)
T 1u5q_A 208 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244 (348)
T ss_dssp -------------------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred -------------------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence 0146899999999984 456899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++ ||.......... .+.....+......+ +...+||.+||..||.+|||+.++|+||||.....+
T Consensus 245 ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~ 315 (348)
T 1u5q_A 245 ELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 315 (348)
T ss_dssp HHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred HHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCc
Confidence 9999 665544433332 333333333222233 345599999999999999999999999999876553
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-32 Score=286.90 Aligned_cols=207 Identities=17% Similarity=0.270 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+.||||+.+++ ++.. ...+++++|+ .|++|.+++... .+++.++..++.||+.||.|||++||+|
T Consensus 91 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH 164 (321)
T 2c30_A 91 NEVVIMRDYQHFNVVEMYK-SYLV---GEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIH 164 (321)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcceEEE-EEEE---CCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788899999999888 4432 2456777777 599999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++........
T Consensus 165 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 196 (321)
T 2c30_A 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------------------------------------------------ 196 (321)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSSSC------------------------------------------------
T ss_pred CCCCHHHEEECCCCcEEEeeeeeeeecccCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..++.++|||||||++|||
T Consensus 197 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el 234 (321)
T 2c30_A 197 ------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234 (321)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... ..+..+.....+. ......+...+|+.+||..||++|||+.++|+||||.....
T Consensus 235 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 235 VDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp HHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred HhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCC
Confidence 98 66544332 3344444333222 11223345569999999999999999999999999986543
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=296.19 Aligned_cols=205 Identities=17% Similarity=0.263 Sum_probs=156.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ +||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 73 E~~il~~~~~hp~Iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givH 147 (353)
T 3txo_A 73 EKRILSLARNHPFLTQLFC-CFQT---PDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIY 147 (353)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhccCCCceeeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 33455555 8999999888 5532 3457778887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++......
T Consensus 148 rDlkp~NILl~~~g~ikL~DFG~a~~~~~~~------------------------------------------------- 178 (353)
T 3txo_A 148 RDLKLDNVLLDHEGHCKLADFGMCKEGICNG------------------------------------------------- 178 (353)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCSCC---------------------------------------------------
T ss_pred cCCCHHHEEECCCCCEEEccccceeecccCC-------------------------------------------------
Confidence 9999999999999999999999885321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||+.|+|||++.+..|+.++|||||||++|||
T Consensus 179 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 217 (353)
T 3txo_A 179 -----------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217 (353)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHH
Confidence 000115789999999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~~ 329 (712)
++ ||...... ..+..+....... .....+...+||.+||..||.+||++ .++++||||+...
T Consensus 218 l~G~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~ 288 (353)
T 3txo_A 218 LCGHAPFEAENED-DLFEAILNDEVVY-PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288 (353)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence 98 67655443 3334433332211 11234556699999999999999998 8999999999763
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=298.80 Aligned_cols=205 Identities=19% Similarity=0.251 Sum_probs=151.3
Q ss_pred ccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 33 THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
...+||||+++++ +|+. ......++++||+. |++|.++|... ...+++.+++.|+.||+.||+|||++||+|||||
T Consensus 110 ~~~~hp~iv~l~~-~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk 188 (400)
T 1nxk_A 110 RASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 188 (400)
T ss_dssp HHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred HhcCCCCcceEeE-EEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence 4568999999988 5532 22345678888884 88999999554 3459999999999999999999999999999999
Q ss_pred CCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 110 PSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 110 P~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+|||++. ++.+||+|||+++......
T Consensus 189 p~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------------- 218 (400)
T 1nxk_A 189 PENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------------- 218 (400)
T ss_dssp GGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------------
T ss_pred cceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------------
Confidence 99999997 7889999999884321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....+||++|+|||++.+..|+.++|||||||++|||+
T Consensus 219 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 257 (400)
T 1nxk_A 219 -----------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257 (400)
T ss_dssp -------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence 001146899999999999889999999999999999999
Q ss_pred C---CCCCChhhH---HHHHhhccc--CCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKT---RTMSSLRHR--VLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~---~~~~~~~~~--~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||....... .....+... .++. .+....+...+||.+||..||.+|||+.++|+||||....
T Consensus 258 ~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 258 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp HSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred hCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence 9 665432211 011222222 1222 2223345566999999999999999999999999997643
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-32 Score=291.86 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=154.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|..++||||+++++ ++. ....+++++|+.+++|.+++.... .+++.+++.|++||+.||+|||++||+||
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~ 156 (329)
T 3gbz_A 82 REVSLLKELQHRNIIELKS-VIH---HNHRLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHR 156 (329)
T ss_dssp HHHHHGGGCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHcCCCCcceEEE-EEe---cCCEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECC
Confidence 5667889999999999888 443 345688999998889999995544 39999999999999999999999999999
Q ss_pred cCCCCceeec-----CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 107 NVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 107 DLkP~NIll~-----~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||+||+++ ..+.+||+|||++...+....
T Consensus 157 Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------- 192 (329)
T 3gbz_A 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-------------------------------------------- 192 (329)
T ss_dssp CCCGGGEEEEC-----CCEEEECCTTHHHHHC------------------------------------------------
T ss_pred CCCHHHEEEecCCCCccceEEECcCCCccccCCccc--------------------------------------------
Confidence 9999999995 445599999998843221100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGv 260 (712)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 193 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 226 (329)
T 3gbz_A 193 ----------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226 (329)
T ss_dssp -----------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHH
Confidence 001146799999999998755 899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCch---------------------------hhh-cCchhHHHHHHcCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLLHPE 309 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~-~~~~~~~li~~~L~~d 309 (712)
++|||++ ||..................|.. ... ..+...+||.+||..|
T Consensus 227 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 306 (329)
T 3gbz_A 227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD 306 (329)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred HHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence 9999998 66554443332222211111100 001 2234459999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCc
Q 005147 310 PSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~ 329 (712)
|.+|||+.|+|+||||+...
T Consensus 307 P~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 307 PVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp GGGSCCHHHHHTSGGGSSSC
T ss_pred hhhCCCHHHHhCCcccCCCC
Confidence 99999999999999998753
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=291.92 Aligned_cols=203 Identities=12% Similarity=0.086 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 90 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 164 (350)
T 1rdq_E 90 NEKRILQAVNFPFLVKLEF-SFKD---NSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIY 164 (350)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999887 4432 3467788887 4899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.....
T Consensus 165 rDlkp~NIll~~~g~~kL~DFg~a~~~~~~-------------------------------------------------- 194 (350)
T 1rdq_E 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGR-------------------------------------------------- 194 (350)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred ccCccceEEECCCCCEEEcccccceeccCC--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 195 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 231 (350)
T 1rdq_E 195 -------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231 (350)
T ss_dssp -------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence 0014689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... ..+..+...... ......+...+||.+||..||.+||+ +++|++||||....
T Consensus 232 l~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~ 301 (350)
T 1rdq_E 232 AAGYPPFFADQPI-QIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301 (350)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred hhCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence 98 66554432 334444333221 11223455669999999999999998 99999999998653
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-32 Score=283.90 Aligned_cols=227 Identities=22% Similarity=0.309 Sum_probs=162.7
Q ss_pred ccceeeccCCCCCcccccccccccc----------cccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE----------AAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~----------~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+++++ ++.+. .....+++++|+. |++|.+++......+++.+++.++.||+.||
T Consensus 51 ~E~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 51 SEVMLLASLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCchHHHHHHH-HHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 4556788899999999887 33222 1234677888875 8899999965555688999999999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.|||++||+||||||+||+++.++.++++|||++.............. ..+
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~-------------------------~~~---- 180 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS-------------------------QNL---- 180 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------------
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccc-------------------------ccc----
Confidence 999999999999999999999999999999999865432210000000 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sD 254 (712)
...........|++.|+|||.+.+. .++.++|
T Consensus 181 -----------------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 213 (303)
T 1zy4_A 181 -----------------------------------------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213 (303)
T ss_dssp ------------------------------------------------------------CTTSCHHHHTSCSCCCTHHH
T ss_pred -----------------------------------------------cccccccccCCCcccccCcccccCCCCCcchhh
Confidence 0000001125689999999999765 5899999
Q ss_pred hHHHHHHHHHhhCCCCCChhhHHHHHhhccc--CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 255 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 255 IwSlGvll~eLl~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||||||++|+|++||............+... ..|+.+.... +...+++.+||..||.+|||+.++++||||+....
T Consensus 214 i~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (303)
T 1zy4_A 214 MYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292 (303)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence 9999999999999988765555555544432 2333333333 33559999999999999999999999999987543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=301.22 Aligned_cols=209 Identities=16% Similarity=0.194 Sum_probs=163.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+.+++ ++.+ ...++++||+ .|++|.++|.+....+++..++.|+.||+.||+|||++|||||
T Consensus 124 E~~il~~~~hp~Iv~l~~-~~~~---~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHr 199 (437)
T 4aw2_A 124 ERDVLVNGDSKWITTLHY-AFQD---DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199 (437)
T ss_dssp HHHHHHHSCTTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhCCCCCEEEEEE-EEee---CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 344677899999999888 5533 3457888887 5999999997655569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.++.+||+|||+++.......
T Consensus 200 DLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------- 230 (437)
T 4aw2_A 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------- 230 (437)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------------
T ss_pred ccCHHHeeEcCCCCEEEcchhhhhhcccCCC-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
......+||++|+|||++. ...|+.++|||||||+
T Consensus 231 ----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvi 270 (437)
T 4aw2_A 231 ----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270 (437)
T ss_dssp ----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHH
Confidence 0001147899999999997 4569999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc----ccCCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR----HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~~~ 330 (712)
+|||++ ||...... ..+..+. ...+|.......+...+||.+||..+|++ ||+++|+++||||+....
T Consensus 271 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w 347 (437)
T 4aw2_A 271 MYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW 347 (437)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred HHHHHhCCCCCCCCChh-HHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence 999999 77655433 2233322 12334433344566679999999998888 999999999999997644
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=292.92 Aligned_cols=193 Identities=17% Similarity=0.247 Sum_probs=146.6
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
+||||+++++ ++. ....+++++|+.|++|.+++.. ....+++.+++.|+.||+.||+|||++||+||||||+|||
T Consensus 94 ~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 169 (360)
T 3llt_A 94 NNNNIVKYHG-KFM---YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL 169 (360)
T ss_dssp TGGGBCCEEE-EEE---ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred CCCCeecccc-eee---ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEE
Confidence 5999999888 443 2356889999999999999943 3345899999999999999999999999999999999999
Q ss_pred ecC-------------------------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 115 MSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 115 l~~-------------------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
++. .+.+||+|||++......
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---------------------------------- 215 (360)
T 3llt_A 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---------------------------------- 215 (360)
T ss_dssp ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------------------------------
T ss_pred EccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----------------------------------
Confidence 975 667888887776321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.....||+.|+|||++.+..+
T Consensus 216 -----------------------------------------------------------~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 216 -----------------------------------------------------------HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp -----------------------------------------------------------CCSCCSCGGGCCHHHHTTCCC
T ss_pred -----------------------------------------------------------CcCccCcccccCcHHHcCCCC
Confidence 001468999999999999999
Q ss_pred CCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc--cCCCchh---------------------------------
Q 005147 250 SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL--------------------------------- 291 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~--~~~~~~~--------------------------------- 291 (712)
+.++|||||||++|+|++ ||....... .+..+.. ...|...
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 999999999999999998 665543322 1111111 1111110
Q ss_pred ----------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 292 ----------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 292 ----------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
....+...+||.+||+.||.+|||+.|+|+||||+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 00113344899999999999999999999999995
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=294.85 Aligned_cols=206 Identities=16% Similarity=0.185 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ ++.+ ...+++++++ .|++|.+++.... .+++.+++.|+.||+.||.|||++||+|
T Consensus 64 ~E~~il~~l~hp~Iv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH 138 (384)
T 4fr4_A 64 KELQIMQGLEHPFLVNLWY-SFQD---EEDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRIIH 138 (384)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4556788899999999888 5532 2356777776 5999999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||++.......
T Consensus 139 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~------------------------------------------------- 169 (384)
T 4fr4_A 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRET------------------------------------------------- 169 (384)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTC-------------------------------------------------
T ss_pred ccCcHHHeEECCCCCEEEeccceeeeccCCC-------------------------------------------------
Confidence 9999999999999999999999885332110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+ ..|+.++|||||||++
T Consensus 170 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 170 ------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH
T ss_pred ------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHH
Confidence 0011578999999999964 4589999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~~~ 329 (712)
|||++ ||..... .......+.... ........+...+||.+||..||.+||+ ++++++||||+...
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~ 279 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcc-cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence 99998 6653221 122222222221 1111223345569999999999999998 99999999999764
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=296.51 Aligned_cols=204 Identities=18% Similarity=0.236 Sum_probs=154.7
Q ss_pred eeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.+|.. .+||||+++++ ++.+ ...+++++|+ .|++|.+++.+. +.+++..++.|+.||+.||+|||++||+|||
T Consensus 104 ~il~~~~~hp~Iv~l~~-~~~~---~~~~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 178 (396)
T 4dc2_A 104 HVFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRD 178 (396)
T ss_dssp HHHHHHTTCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhcCCCCCcCeeEE-EEEE---CCEEEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence 34544 48999999888 5532 3457777777 589999999554 3499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+|||++.+|.+||+|||+++......
T Consensus 179 LKp~NILl~~~g~ikL~DFGla~~~~~~~--------------------------------------------------- 207 (396)
T 4dc2_A 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPG--------------------------------------------------- 207 (396)
T ss_dssp CCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------------------------
T ss_pred CCHHHEEECCCCCEEEeecceeeecccCC---------------------------------------------------
Confidence 99999999999999999999985321110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 208 ---------------------------------------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~ 248 (396)
T 4dc2_A 208 ---------------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248 (396)
T ss_dssp ---------------------------------------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 00011578999999999999999999999999999999999
Q ss_pred ---CCCCCh--------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCCc
Q 005147 268 ---PFSTGE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (712)
Q Consensus 268 ---pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~~ 329 (712)
||.... ........+..... .......+...+||.+||+.||.+||++ .+|++||||+...
T Consensus 249 G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~ 326 (396)
T 4dc2_A 249 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326 (396)
T ss_dssp SSCSSTTTTC------CCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred CCCCCcccccccccchhhHHHHHHHHhcccc-CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence 664211 11112222222211 1112234556699999999999999985 7999999998764
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-32 Score=288.59 Aligned_cols=209 Identities=14% Similarity=0.167 Sum_probs=160.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+++++ ++. ....+++++|+.+++|.+++......+++.++..++.||+.||+|||++||+||
T Consensus 61 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 136 (346)
T 1ua2_A 61 REIKLLQELSHPNIIGLLD-AFG---HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136 (346)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---CTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHhhCCCCCCCeEEE-EEe---eCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECC
Confidence 4566788899999999888 553 234678899998889999997766679999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..+....
T Consensus 137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------- 167 (346)
T 1ua2_A 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------- 167 (346)
T ss_dssp CCCGGGEEECTTCCEEECCCGGGSTTTSCCC-------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEEecccceeccCCcc-------------------------------------------------
Confidence 9999999999999999999999854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+.. ++.++|||||||++|||
T Consensus 168 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 206 (346)
T 1ua2_A 168 -----------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206 (346)
T ss_dssp -----------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHH
Confidence 001146899999999997654 89999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc-CCC--ch-----------------------h-hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR-VLP--PQ-----------------------L-LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~-~~~--~~-----------------------~-~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||...... ..+..+... ..+ .. . ....+...+||.+||..||.+|||
T Consensus 207 l~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 207 LLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 98 44333322 222222110 000 00 0 112244569999999999999999
Q ss_pred HHHHhcCcCCCCCcC
Q 005147 316 MGELLQSEFLNEPRD 330 (712)
Q Consensus 316 ~~eiL~hp~~~~~~~ 330 (712)
+.|+|+||||+....
T Consensus 286 ~~ell~h~~f~~~~~ 300 (346)
T 1ua2_A 286 ATQALKMKYFSNRPG 300 (346)
T ss_dssp HHHHHTSGGGTSSSC
T ss_pred HHHHhcChhhhcCCC
Confidence 999999999987544
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=295.61 Aligned_cols=206 Identities=17% Similarity=0.208 Sum_probs=160.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 135 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 210 (373)
T 2x4f_A 135 NEISVMNQLDHANLIQLYD-AFES---KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210 (373)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 3457778877 589999999655556999999999999999999999999999
Q ss_pred ccCCCCceee--cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll--~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||+ +..+.+||+|||+++......
T Consensus 211 ~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------------------------------------- 243 (373)
T 2x4f_A 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------------------------------------- 243 (373)
T ss_dssp CCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-----------------------------------------------
T ss_pred ccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-----------------------------------------------
Confidence 9999999999 466789999999885432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 244 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 279 (373)
T 2x4f_A 244 --------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279 (373)
T ss_dssp --------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHH
Confidence 000146899999999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||++ ||....... ....+.... .+ ..+....+...+||.+||..||.+|||+.|+|+||||...
T Consensus 280 elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 280 MLLSGLSPFLGDNDAE-TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 9999 666554432 333332222 22 2223344556699999999999999999999999999875
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=301.00 Aligned_cols=204 Identities=20% Similarity=0.225 Sum_probs=159.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.++..|++||+.||.|||++||+|
T Consensus 75 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 149 (484)
T 3nyv_A 75 REVQLLKQLDHPNIMKLYE-FFED---KGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVH 149 (484)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5566889999999999888 5533 3456777776 6999999995544 4999999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.+||+|||++.......
T Consensus 150 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 183 (484)
T 3nyv_A 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---------------------------------------------- 183 (484)
T ss_dssp SCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------------------------------------
Confidence 9999999999 467889999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++.+ .|+.++|||||||++
T Consensus 184 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 217 (484)
T 3nyv_A 184 ---------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 217 (484)
T ss_dssp ---------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHHHHH
Confidence 0011468999999999976 699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... ..+..+....+. +.+....+...+||.+||..+|.+|||+.++|+||||+..
T Consensus 218 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 218 YILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 99999 66554433 344444443322 2233344556699999999999999999999999999754
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-32 Score=298.17 Aligned_cols=205 Identities=21% Similarity=0.235 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ..+++++|+ .|++|.+++.... .+++.+++.|+.||+.||+|||++||+|
T Consensus 189 ~E~~~l~~l~hpniv~l~~-~~~~----~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH 262 (419)
T 3i6u_A 189 TEIEILKKLNHPCIIKIKN-FFDA----EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIH 262 (419)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EEES----SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec----CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667889999999999888 5532 235677777 5899999985544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++..+ .+||+|||+++..+....
T Consensus 263 rDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~--------------------------------------------- 297 (419)
T 3i6u_A 263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--------------------------------------------- 297 (419)
T ss_dssp SCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------------------------------------------
T ss_pred cCCChHhEEEecCCCcceEEEeecccceecCCCcc---------------------------------------------
Confidence 99999999997554 499999999854322100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlG 259 (712)
....+||+.|+|||++.+ ..++.++||||||
T Consensus 298 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG 331 (419)
T 3i6u_A 298 ----------------------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 331 (419)
T ss_dssp -----------------------------------------------------CTTCCTTTTC----CTTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCCccCceeeecCCCCCCCchhhhHhHH
Confidence 011468999999999864 5588999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|+|++ ||............+..... ++.. ....+...+||.+||+.||.+|||+.++|+||||+..
T Consensus 332 ~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 332 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred HHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999 66543332222333333222 2222 3334555699999999999999999999999999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=296.20 Aligned_cols=199 Identities=16% Similarity=0.213 Sum_probs=149.6
Q ss_pred CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+|+||+.+++ ++. ....+++++|+.+++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 156 ~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NI 231 (429)
T 3kvw_A 156 DNTMNVIHMLE-NFT---FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI 231 (429)
T ss_dssp TSCSCBCCEEE-EEE---ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGE
T ss_pred cCCcCEEEEEe-ecc---cCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 47889999887 442 23578999999989999999443 34589999999999999999999999999999999999
Q ss_pred eecCCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 114 VMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 114 ll~~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|++.++. +||+|||++...+..
T Consensus 232 Ll~~~~~~~vkL~DFG~a~~~~~~-------------------------------------------------------- 255 (429)
T 3kvw_A 232 LLKQQGRSGIKVIDFGSSCYEHQR-------------------------------------------------------- 255 (429)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC--------------------------------------------------------
T ss_pred EEccCCCcceEEeecccceecCCc--------------------------------------------------------
Confidence 9998887 999999987332111
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 256 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 256 -------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp -------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred -------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 001468999999999999999999999999999999999 5
Q ss_pred CCCChhhHHHHHhhcc-cCCCchh-------------------------------------------------------h
Q 005147 269 FSTGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L 292 (712)
Q Consensus 269 f~~~~~~~~~~~~~~~-~~~~~~~-------------------------------------------------------~ 292 (712)
|............+.. +..+..+ .
T Consensus 299 f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 378 (429)
T 3kvw_A 299 LPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378 (429)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTT
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhcc
Confidence 5544332222111110 0000000 0
Q ss_pred -hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 293 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 293 -~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
...+...+||.+||..||++|||+.|+|+||||+....
T Consensus 379 ~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp TCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred ccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 01234559999999999999999999999999997643
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-32 Score=290.42 Aligned_cols=216 Identities=15% Similarity=0.199 Sum_probs=159.6
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++.+.... .....+++++|+.+++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 78 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 157 (362)
T 3pg1_A 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157 (362)
T ss_dssp HHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEe
Confidence 5666788899999999988433222 334478999999889999999766667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 158 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 188 (362)
T 3pg1_A 158 RDLHPGNILLADNNDITICDFNLAREDTADA------------------------------------------------- 188 (362)
T ss_dssp CCCCGGGEEECTTCCEEECCTTC---------------------------------------------------------
T ss_pred cCCChHHEEEcCCCCEEEEecCccccccccc-------------------------------------------------
Confidence 9999999999999999999999884321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||++.+ ..++.++|||||||++|+
T Consensus 189 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 226 (362)
T 3pg1_A 189 ------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE 226 (362)
T ss_dssp -------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHH
Confidence 0011467999999999977 569999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccC-------------------------CCc-----hhhhcCchhHHHHHHcCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRV-------------------------LPP-----QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~-------------------------~~~-----~~~~~~~~~~~li~~~L~~dP~ 311 (712)
|++ ||................. .+. ......+...+||.+||..||.
T Consensus 227 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 306 (362)
T 3pg1_A 227 MFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306 (362)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGG
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChh
Confidence 998 6655433222111111000 000 0111234456999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCchH
Q 005147 312 GRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+|||+.++|+||||+....+..
T Consensus 307 ~Rpt~~ell~hp~f~~~~~~~~ 328 (362)
T 3pg1_A 307 RRISTEQALRHPYFESLFDPLD 328 (362)
T ss_dssp GSCCHHHHHTSGGGTTTCCGGG
T ss_pred hCCCHHHHHcCchhhhccCccc
Confidence 9999999999999998765443
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-32 Score=294.16 Aligned_cols=207 Identities=15% Similarity=0.164 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+. |++|.+++...+ .+++.+++.|++||+.||.|||++||+|
T Consensus 65 ~E~~~l~~l~hpniv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~ivH 139 (361)
T 3uc3_A 65 REIINHRSLRHPNIVRFKE-VIL---TPTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICH 139 (361)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCCCCCCcEEE-EEe---eCCEEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5556788899999999888 543 234577888875 899999995443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+||+++.++. +||+|||+++......
T Consensus 140 ~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 172 (361)
T 3uc3_A 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------------------------------------- 172 (361)
T ss_dssp CCCCGGGEEECSSSSCCEEECCCCCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCceEEEeecCccccccccC-----------------------------------------------
Confidence 999999999987665 9999999874211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc-cchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-sDIwSlGvll 262 (712)
......||++|+|||++.+..++.+ +|||||||++
T Consensus 173 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (361)
T 3uc3_A 173 --------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208 (361)
T ss_dssp ----------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHH
Confidence 0011468999999999988887655 9999999999
Q ss_pred HHhhC---CCCCChhh---HHHHHhhcccCC-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEK---TRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... ...+..+..... .+......+...+||.+||..||.+|||+.|+++||||....
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 99998 66543221 222222222221 122223345666999999999999999999999999996543
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=298.64 Aligned_cols=206 Identities=18% Similarity=0.216 Sum_probs=159.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 70 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH 144 (486)
T 3mwu_A 70 REVELLKKLDHPNIMKLFE-ILED---SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVH 144 (486)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcCeEEE-EEEc---CCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788999999999888 5533 3457777777 5899999885443 4999999999999999999999999999
Q ss_pred ccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++ .++.+||+|||++.......
T Consensus 145 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 178 (486)
T 3mwu_A 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------------------------------------------- 178 (486)
T ss_dssp SCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----------------------------------------------
T ss_pred ccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------------------------------------
Confidence 99999999995 45579999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++.+ .|+.++|||||||++
T Consensus 179 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 212 (486)
T 3mwu_A 179 ---------------------------------------------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL 212 (486)
T ss_dssp ------------------------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHH
Confidence 0011468999999999976 499999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... .....+....++ +.+....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 213 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~ 285 (486)
T 3mwu_A 213 YILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285 (486)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence 99998 66554433 334444433322 233334556669999999999999999999999999986543
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-32 Score=294.57 Aligned_cols=213 Identities=17% Similarity=0.179 Sum_probs=158.6
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..++.|+.||+.||+|||++
T Consensus 81 ~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (394)
T 4e7w_A 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160 (394)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 56678899999999999884443222 222477899998777766552 2344599999999999999999999999
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+|||++ .++.+||+|||+++......
T Consensus 161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~-------------------------------------------- 196 (394)
T 4e7w_A 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-------------------------------------------- 196 (394)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC--------------------------------------------
Confidence 999999999999999 78999999999885431110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlG 259 (712)
......||++|+|||++.+.. |+.++||||||
T Consensus 197 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 229 (394)
T 4e7w_A 197 -----------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTG 229 (394)
T ss_dssp -----------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred -----------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHH
Confidence 001146799999999997764 99999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCC----ch----hh-hcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLP----PQ----LL-LKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~----~~----~~-~~~~~~~~li~~~L~~d 309 (712)
|++|||++ ||............+.. ..++ .. +. ...+...+||.+||..|
T Consensus 230 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (394)
T 4e7w_A 230 CVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT 309 (394)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC
Confidence 99999999 66654433222221111 0011 00 11 12345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.+|||+.|+|+||||+....
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 310 PSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp GGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhCCCHHHHhcChhhhhhcc
Confidence 999999999999999998654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-32 Score=292.85 Aligned_cols=211 Identities=18% Similarity=0.266 Sum_probs=156.5
Q ss_pred ccceeeccCCC--CCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H--~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.| |||+.+++ ++. ....++++||+.+++|.+++.... .+++.++..|+.||+.||.|||++||+
T Consensus 56 ~E~~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ii 130 (343)
T 3dbq_A 56 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 130 (343)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhhhcCCceEEEee-eEe---eCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35556777766 99999888 443 345788999999999999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++ ++.+||+|||++.........
T Consensus 131 HrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 163 (343)
T 3dbq_A 131 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 163 (343)
T ss_dssp CCCCCGGGEEEE-TTEEEECCCSSSCCC----------------------------------------------------
T ss_pred cCCCCcceEEEE-CCcEEEeecccccccCccccc----------------------------------------------
Confidence 999999999996 688999999998543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
......+||++|+|||++.+ ..++.++
T Consensus 164 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 201 (343)
T 3dbq_A 164 ------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201 (343)
T ss_dssp ------------------------------------------------CCCCSSCCHHHHHHCC-----------CCHHH
T ss_pred ------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchh
Confidence 00011468999999999864 5689999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++ ||.........+..+........++... +...+|+.+||..||.+|||+.++|+||||+...
T Consensus 202 DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 99999999999998 6654333333333333322222222233 3456999999999999999999999999998765
Q ss_pred Cc
Q 005147 330 DS 331 (712)
Q Consensus 330 ~~ 331 (712)
.+
T Consensus 282 ~~ 283 (343)
T 3dbq_A 282 HP 283 (343)
T ss_dssp C-
T ss_pred Cc
Confidence 43
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=294.36 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=158.4
Q ss_pred ccceeeccCCCCCcccccccccccc----------------------------------cccCceEEEEeeCCccHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQWL 72 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~----------------------------------~~~~~~~l~~e~~g~sL~~~l 72 (712)
++..+++.++||||+++++.++... .....++++||+.+++|.+.+
T Consensus 49 ~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l 128 (383)
T 3eb0_A 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128 (383)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHHH
T ss_pred HHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHH
Confidence 5667889999999999988443221 223347899999888988877
Q ss_pred c---CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccc
Q 005147 73 D---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMET 148 (712)
Q Consensus 73 ~---~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~ 148 (712)
. ..+..+++..++.|+.||+.||.|||++||+||||||+||+++ .++.+||+|||+++......
T Consensus 129 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~------------ 196 (383)
T 3eb0_A 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE------------ 196 (383)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS------------
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC------------
Confidence 3 2345699999999999999999999999999999999999997 67899999999885432110
Q ss_pred cCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccc
Q 005147 149 KDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 228 (712)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 228 (712)
.
T Consensus 197 -------------------------------------------------------------------------------~ 197 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------P 197 (383)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred ccccccCccccCcccccCCC-CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccC------------------
Q 005147 229 QILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------ 286 (712)
Q Consensus 229 ~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~------------------ 286 (712)
.....||++|+|||.+.+.. ++.++|||||||++|||++ ||............+....
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (383)
T 3eb0_A 198 SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVR 277 (383)
T ss_dssp CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CC
T ss_pred CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccccc
Confidence 01146799999999998765 9999999999999999998 6655443332222221100
Q ss_pred CC----ch----hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 287 LP----PQ----LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 287 ~~----~~----~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+| .. +.. ..+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 278 FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred CCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 00 00 111 223455999999999999999999999999998653
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=290.30 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=161.0
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.||||+++++ ++... .....+++++++.+++|.+++... .+++.+++.|+.||+.||.|||++||+
T Consensus 74 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~iv 150 (364)
T 3qyz_A 74 REIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVL 150 (364)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788899999999888 44332 223468999999989999999543 389999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||++.........
T Consensus 151 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 184 (364)
T 3qyz_A 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH---------------------------------------------- 184 (364)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB----------------------------------------------
T ss_pred cCCCChHhEEECCCCCEEEEeCcceEecCCCCCc----------------------------------------------
Confidence 9999999999999999999999988543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
........||++|+|||++.+.. ++.++|||||||++|
T Consensus 185 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 223 (364)
T 3qyz_A 185 -----------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 223 (364)
T ss_dssp -----------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHH
Confidence 00001147899999999876544 899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCc-----------------------------hhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPP-----------------------------QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||..................|. ......+...+||.+||..||.
T Consensus 224 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 303 (364)
T 3qyz_A 224 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 303 (364)
T ss_dssp HHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTT
T ss_pred HHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChh
Confidence 9998 6654433222111111000000 0112234556999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCch
Q 005147 312 GRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|||+.|+|+||||+....+.
T Consensus 304 ~R~t~~e~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 304 KRIEVEQALAHPYLEQYYDPS 324 (364)
T ss_dssp TSCCHHHHHTSGGGTTTCCGG
T ss_pred hCCCHHHHhcCcchhhccCcc
Confidence 999999999999999875543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-32 Score=297.48 Aligned_cols=213 Identities=16% Similarity=0.202 Sum_probs=157.7
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+|+.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..++.|+.||+.||.|||++
T Consensus 96 ~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (420)
T 1j1b_A 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175 (420)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 56678999999999999884443222 222467899998888887663 2345599999999999999999999999
Q ss_pred CceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+|||++.+ +.+||+|||+++......
T Consensus 176 ~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 211 (420)
T 1j1b_A 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-------------------------------------------- 211 (420)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CccccCCChhhEEEeCCCCeEEeccchhhhhcccCC--------------------------------------------
Confidence 99999999999999955 568999999885431110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
.....+||++|+|||++.+. .|+.++||||||
T Consensus 212 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 244 (420)
T 1j1b_A 212 -----------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 244 (420)
T ss_dssp -----------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred -----------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHH
Confidence 00114689999999999775 699999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCCc----h----h-hhcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP----Q----L-LLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~~----~----~-~~~~~~~~~li~~~L~~d 309 (712)
|++|||++ ||............+.. ..+|. . + ....+...+||.+||..|
T Consensus 245 ~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~d 324 (420)
T 1j1b_A 245 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 324 (420)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSS
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCC
Confidence 99999999 66554433222221110 00110 0 0 112345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.+|||+.|+|+||||.....
T Consensus 325 P~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 325 PTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp GGGSCCHHHHHTSGGGGGGGC
T ss_pred hhHCCCHHHHhCCHhhccccc
Confidence 999999999999999986544
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-32 Score=290.12 Aligned_cols=202 Identities=18% Similarity=0.239 Sum_probs=157.0
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+|.. .+||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+||||
T Consensus 70 il~~~~~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 144 (345)
T 1xjd_A 70 VLSLAWEHPFLTHMFC-TFQT---KENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144 (345)
T ss_dssp HHHHHTTCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred HHHhcCCCCCCCcEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 4444 49999999888 5532 3457788887 5899999995543 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.+|.+||+|||+++.......
T Consensus 145 kp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------------- 173 (345)
T 1xjd_A 145 KLDNILLDKDGHIKIADFGMCKENMLGDA--------------------------------------------------- 173 (345)
T ss_dssp CGGGEEECTTSCEEECCCTTCBCCCCTTC---------------------------------------------------
T ss_pred ChhhEEECCCCCEEEeEChhhhhcccCCC---------------------------------------------------
Confidence 99999999999999999998853211100
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 174 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 214 (345)
T 1xjd_A 174 ---------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214 (345)
T ss_dssp ---------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcC
Confidence 0011578999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH-HHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eiL~hp~~~~~~ 329 (712)
||...... .....+..... .......+...+||.+||..||.+||++. ++++||||+...
T Consensus 215 ~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~ 277 (345)
T 1xjd_A 215 QSPFHGQDEE-ELFHSIRMDNP-FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277 (345)
T ss_dssp SCSSCCSSHH-HHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred CCCCCCCCHH-HHHHHHHhCCC-CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence 66554433 33333333221 11112334556999999999999999998 999999998764
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=295.91 Aligned_cols=210 Identities=18% Similarity=0.261 Sum_probs=155.1
Q ss_pred ccceeeccCC--CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~--H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+. ||||+++++ ++. ....++++||+.+++|.+++.... .+++.+++.|++||+.||.|||++||+
T Consensus 103 ~Ei~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~iv 177 (390)
T 2zmd_A 103 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 177 (390)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHcccCCCeEEEEEE-EEe---cCCEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3445666665 599999887 442 234588999999999999995544 589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++ ++.+||+|||+++........
T Consensus 178 HrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 210 (390)
T 2zmd_A 178 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 210 (390)
T ss_dssp CCCCCGGGEEES-SSCEEECCCSSSCCC----------------------------------------------------
T ss_pred ecCCCHHHEEEE-CCeEEEEecCccccccCCCcc----------------------------------------------
Confidence 999999999995 689999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
......+||+.|+|||++.+ ..++.++
T Consensus 211 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
T 2zmd_A 211 ------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248 (390)
T ss_dssp ---------------------------------------------CCSCCCGGGCCHHHHHCC------------CCHHH
T ss_pred ------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChh
Confidence 00011468999999999865 3589999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++ ||.........+..+........+... .+...+||.+||..||.+|||+.++|+||||+...
T Consensus 249 DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 99999999999999 665443333333333332222222222 23456999999999999999999999999998664
Q ss_pred C
Q 005147 330 D 330 (712)
Q Consensus 330 ~ 330 (712)
.
T Consensus 329 ~ 329 (390)
T 2zmd_A 329 H 329 (390)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-32 Score=294.73 Aligned_cols=217 Identities=17% Similarity=0.111 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||+
T Consensus 75 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 150 (389)
T 3gni_B 75 GELHVSKLFNHPNIVPYRA-TFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150 (389)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCCCcEeE-EEEE---CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3566788899999999888 5432 3457777777 58999999943 234599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+|++|||.+...... |....
T Consensus 151 HrDlkp~NIll~~~~~~kl~dfg~~~~~~~~------------------------------------~~~~~-------- 186 (389)
T 3gni_B 151 HRSVKASHILISVDGKVYLSGLRSNLSMISH------------------------------------GQRQR-------- 186 (389)
T ss_dssp CCCCSGGGEEECTTCCEEECCGGGCEECEET------------------------------------TEECS--------
T ss_pred cCCCCHHHEEEcCCCCEEEcccccceeeccc------------------------------------ccccc--------
Confidence 9999999999999999999999987432110 00000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll 262 (712)
..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 187 ---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 227 (389)
T 3gni_B 187 ---------------------------------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 227 (389)
T ss_dssp ---------------------------------------CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHH
Confidence 00000011468999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC-------------------------------------------C-chhhhcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL-------------------------------------------P-PQLLLKF 295 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~-------------------------------------------~-~~~~~~~ 295 (712)
|||++ ||............+..... . +......
T Consensus 228 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 307 (389)
T 3gni_B 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 307 (389)
T ss_dssp HHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------CC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC
Confidence 99998 66543333222222111100 0 0011123
Q ss_pred chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 296 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+...+||.+||+.||++|||+.|+|+||||+....
T Consensus 308 ~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 308 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 44558999999999999999999999999987643
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=296.90 Aligned_cols=207 Identities=15% Similarity=0.174 Sum_probs=160.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ ++.+ ...++++||+. |++|.+++... .+++..++.|+.||+.||+|||++||+||
T Consensus 119 E~~il~~l~hp~Iv~l~~-~~~~---~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHr 192 (410)
T 3v8s_A 119 ERDIMAFANSPWVVQLFY-AFQD---DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHR 192 (410)
T ss_dssp HHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 445788899999999888 5532 34678888885 99999999543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.+|.+||+|||+++........
T Consensus 193 DLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~------------------------------------------------ 224 (410)
T 3v8s_A 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV------------------------------------------------ 224 (410)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSEE------------------------------------------------
T ss_pred cCCHHHeeECCCCCEEEeccceeEeeccCCcc------------------------------------------------
Confidence 99999999999999999999998543221000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+.. |+.++|||||||++
T Consensus 225 -----------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvil 263 (410)
T 3v8s_A 225 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263 (410)
T ss_dssp -----------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHH
Confidence 001157899999999998765 88999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||...... .....+... ...+......+...+||.+||..+|.+ ||+++||++||||+....
T Consensus 264 yell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w 338 (410)
T 3v8s_A 264 YEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 338 (410)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred HHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence 99998 77654433 333333221 111222233455669999999999988 999999999999998643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=282.50 Aligned_cols=207 Identities=18% Similarity=0.249 Sum_probs=161.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+. |++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 64 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ivH 138 (321)
T 2a2a_A 64 REVSILRQVLHHNVITLHD-VYEN---RTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (321)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcceEEE-EEec---CCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 5532 34577788875 89999999654 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .++++|||++.......
T Consensus 139 ~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 173 (321)
T 2a2a_A 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--------------------------------------------- 173 (321)
T ss_dssp CCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CCCChHHEEEecCCCCcCCEEEccCccceecCccc---------------------------------------------
Confidence 99999999999887 79999999884332110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 207 (321)
T 2a2a_A 174 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207 (321)
T ss_dssp ----------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHHHH
Confidence 0001468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||...... .....+.... .++..... .+...+||.+||..||.+|||+.++|+||||+....
T Consensus 208 l~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~ 281 (321)
T 2a2a_A 208 TYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN 281 (321)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCc
Confidence 999998 66554333 3333333322 23333333 344559999999999999999999999999987643
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=288.09 Aligned_cols=209 Identities=16% Similarity=0.247 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++...... ..+++++++.+++|.+++.. .+++.++..|+.||+.||+|||++||
T Consensus 90 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~i 165 (371)
T 4exu_A 90 RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGV 165 (371)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5666788899999999998 55433222 24589999988999998833 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++...+..
T Consensus 166 vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------------------------------------ 197 (371)
T 4exu_A 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 197 (371)
T ss_dssp CCSCCCGGGEEECTTCCEEECSTTCC------------------------------------------------------
T ss_pred cCCCcCHHHeEECCCCCEEEEecCcccccccC------------------------------------------------
Confidence 99999999999999999999999988432111
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....||++|+|||++.+ ..++.++|||||||++
T Consensus 198 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (371)
T 4exu_A 198 ---------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232 (371)
T ss_dssp -----------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHH
Confidence 001467999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC-c----------------------------hhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP-P----------------------------QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............+.....+ . ......+...+||.+||..||
T Consensus 233 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 312 (371)
T 4exu_A 233 AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 312 (371)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCT
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCCh
Confidence 99998 665544332222211111010 0 011224456699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCch
Q 005147 311 SGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.+|||+.|+|+||||+....+.
T Consensus 313 ~~Rpt~~ell~hp~f~~~~~~~ 334 (371)
T 4exu_A 313 DKRLTAAQALTHPFFEPFRDPE 334 (371)
T ss_dssp TTSCCHHHHHTSGGGTTTCCGG
T ss_pred hhcCCHHHHhcCcccccCCCcc
Confidence 9999999999999999775543
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=288.27 Aligned_cols=206 Identities=17% Similarity=0.248 Sum_probs=155.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..+ +||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|
T Consensus 59 E~~~l~~~~~hp~iv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivH 133 (345)
T 3a8x_A 59 EKHVFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIY 133 (345)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhcCCCCccCeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 34455555 8999999888 5532 3467788887 5899999995443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++...... +
T Consensus 134 rDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~--------------- 165 (345)
T 3a8x_A 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D--------------- 165 (345)
T ss_dssp CCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C---------------
T ss_pred cCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C---------------
Confidence 9999999999999999999999885321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 166 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 203 (345)
T 3a8x_A 166 ------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203 (345)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCC
Q 005147 266 FC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~ 328 (712)
++ ||... .........+..... .......+...+||.+||..||.+||++ .++++||||+..
T Consensus 204 l~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 98 66431 111122222222211 1112234556699999999999999985 899999999875
Q ss_pred c
Q 005147 329 R 329 (712)
Q Consensus 329 ~ 329 (712)
.
T Consensus 283 ~ 283 (345)
T 3a8x_A 283 D 283 (345)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=282.28 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=151.3
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-Cceec
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 106 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHr 106 (712)
.++.++||||+++++ ++. ....+++++|+.+++|.+++.. ....+++.+++.|+.||+.||+|||++ ||+||
T Consensus 59 ~~~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~ 134 (290)
T 3fme_A 59 SMRTVDCPFTVTFYG-ALF---REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134 (290)
T ss_dssp HHTTCCCTTBCCEEE-EEE---CSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHhCCCCeEEEEee-eee---ccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 477899999999888 443 2356889999988899888732 445699999999999999999999998 99999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++.......
T Consensus 135 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 164 (290)
T 3fme_A 135 DVKPSNVLINALGQVKMCDFGISGYLVDDV-------------------------------------------------- 164 (290)
T ss_dssp CCSGGGCEECTTCCEEBCCC------------------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeecCCcccccccc--------------------------------------------------
Confidence 999999999999999999999884332110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc----cCCCCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+ .+..++.++|||||||++
T Consensus 165 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 203 (290)
T 3fme_A 165 -----------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203 (290)
T ss_dssp ----------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHH
Confidence 00013579999999996 455689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||..................+..... ..+...+|+.+||..||.+|||+.++++||||+..
T Consensus 204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 204 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 99998 66653333333333333333332222 33455699999999999999999999999999854
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=287.03 Aligned_cols=205 Identities=17% Similarity=0.229 Sum_probs=157.9
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ .||||+.+++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 70 E~~~l~~~~~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givH 144 (353)
T 2i0e_A 70 EKRVLALPGKPPFLTQLHS-CFQT---MDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIY 144 (353)
T ss_dssp HHHHHTCTTCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhcCCCCEEeeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 33456655 8999999887 4432 3467788887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.......
T Consensus 145 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~------------------------------------------------ 176 (353)
T 2i0e_A 145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGV------------------------------------------------ 176 (353)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCCCCTTC------------------------------------------------
T ss_pred ccCCHHHEEEcCCCcEEEEeCCcccccccCCc------------------------------------------------
Confidence 99999999999999999999998853211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 214 (353)
T 2i0e_A 177 ------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214 (353)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+||+ +.++++||||+...
T Consensus 215 l~G~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~ 284 (353)
T 2i0e_A 215 LAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284 (353)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred HcCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence 98 66654433 333333332211 11223455669999999999999994 69999999998753
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-32 Score=291.31 Aligned_cols=208 Identities=20% Similarity=0.270 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.... ....+++++|+.+++|.+++.. .+++.++..++.||+.||.|||++||
T Consensus 73 ~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~i 148 (371)
T 2xrw_A 73 RELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 148 (371)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5666788899999999988 543332 2246899999988899999853 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||+++..+...
T Consensus 149 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 181 (371)
T 2xrw_A 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 181 (371)
T ss_dssp CCSCCCGGGEEECTTSCEEECCCCC-------------------------------------------------------
T ss_pred ecccCCHHHEEEcCCCCEEEEEeeccccccccc-----------------------------------------------
Confidence 999999999999999999999999884322110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 182 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 217 (371)
T 2xrw_A 182 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217 (371)
T ss_dssp ----------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHH
Confidence 001146899999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC-CC-chhh---------------------------------------hcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLL---------------------------------------LKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~-~~-~~~~---------------------------------------~~~~~~~ 299 (712)
+|++ ||........ +..+.... .| +.+. ...+...
T Consensus 218 el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
T 2xrw_A 218 EMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 296 (371)
T ss_dssp HHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHH
Confidence 9998 6665443322 22221111 00 0000 0012345
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.|+|+||||+....
T Consensus 297 ~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 327 (371)
T 2xrw_A 297 DLLSKMLVIDASKRISVDEALQHPYINVWYD 327 (371)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred HHHHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence 9999999999999999999999999987654
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=284.61 Aligned_cols=205 Identities=18% Similarity=0.224 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 70 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 144 (327)
T 3a62_A 70 AERNILEEVKHPFIVDLIY-AFQT---GGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIY 144 (327)
T ss_dssp -HHHHHHHCCCTTBCCEEE-EEEC---SSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCccceeE-EEEc---CCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 4556788899999999887 4432 3467777777 5899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++...... .
T Consensus 145 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~--------------- 176 (327)
T 3a62_A 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T--------------- 176 (327)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCC--------------------------------------------------------
T ss_pred ccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 177 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 214 (327)
T 3a62_A 177 ------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM 214 (327)
T ss_dssp --------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+...... ......+...+||.+||..||.+|| ++.++++||||+..
T Consensus 215 ~~g~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 215 LTGAPPFTGENRK-KTIDKILKCKLN-LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHSSCSCCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 98 66654433 233333222211 1112234556999999999999999 88999999999865
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=295.71 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..+|..+.||||+.+++ ++.. ...++++||+ .|++|.+++.... .+++..++.|+.||+.||+|||+ +||+
T Consensus 197 ~e~~~l~~l~h~~iv~l~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~gii 271 (446)
T 4ejn_A 197 TENRVLQNSRHPFLTALKY-SFQT---HDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVV 271 (446)
T ss_dssp ----CCCCCSCTTSCCEEE-EEEE---TTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhCCCCeEeeEEE-EEee---CCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 5566889999999999888 4432 3457788887 5889999995443 48999999999999999999998 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++.......
T Consensus 272 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------- 304 (446)
T 4ejn_A 272 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA----------------------------------------------- 304 (446)
T ss_dssp CCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------------------------------------
T ss_pred ECCCCHHHEEECCCCCEEEccCCCceeccCCCc-----------------------------------------------
Confidence 999999999999999999999998843211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 305 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 341 (446)
T 4ejn_A 305 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341 (446)
T ss_dssp ---------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHH
Confidence 0011578999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||...... .....+...... ......+...+||.+||..||.+|| |+.++|+||||+...
T Consensus 342 ll~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~ 412 (446)
T 4ejn_A 342 MMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412 (446)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HhhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence 998 67654433 233332222211 1112345566999999999999999 999999999999763
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=286.91 Aligned_cols=202 Identities=17% Similarity=0.195 Sum_probs=157.2
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|||||
T Consensus 92 ll~~~~hp~Iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk 166 (373)
T 2r5t_A 92 LLKNVKHPFLVGLHF-SFQT---ADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166 (373)
T ss_dssp CBCCCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCCCCCCCEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 467899999999887 4432 3467777777 5899999995543 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+|||++.+|.+||+|||+++......
T Consensus 167 p~NIll~~~g~ikL~DFG~a~~~~~~~----------------------------------------------------- 193 (373)
T 2r5t_A 167 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 193 (373)
T ss_dssp GGGEEECTTSCEEECCCCBCGGGBCCC-----------------------------------------------------
T ss_pred HHHEEECCCCCEEEeeCccccccccCC-----------------------------------------------------
Confidence 999999999999999999884311000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 194 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 194 -------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp -------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 00011578999999999999999999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCCc
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~~ 329 (712)
||...... ..+..+...... ......+...+||.+||..||.+||++ .++++||||+...
T Consensus 237 ~Pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~ 301 (373)
T 2r5t_A 237 PPFYSRNTA-EMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301 (373)
T ss_dssp CTTCCSBHH-HHHHHHHHSCCC-CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred CCCCCCCHH-HHHHHHHhcccC-CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence 66654433 333333332211 111233455699999999999999986 6999999998753
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-32 Score=294.67 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=158.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ ++.+ ...++++||+ .|++|.++|.+.+..+++..++.|+.||+.||+|||++||+||
T Consensus 111 E~~il~~~~hp~Iv~l~~-~~~~---~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHr 186 (412)
T 2vd5_A 111 ERDVLVNGDRRWITQLHF-AFQD---ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186 (412)
T ss_dssp HHHHHHHSCTTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhcCCCCeeeEEE-EEee---CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 344677889999999888 5533 3467888887 4999999996554569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.+|++||+|||+++.......
T Consensus 187 DLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------- 217 (412)
T 2vd5_A 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------- 217 (412)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------------
T ss_pred ccCHHHeeecCCCCEEEeechhheeccCCCc-------------------------------------------------
Confidence 9999999999999999999999854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-------CCCCCCccchHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRLG 259 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~~sDIwSlG 259 (712)
......+||+.|+|||++. +..|+.++||||||
T Consensus 218 ----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlG 257 (412)
T 2vd5_A 218 ----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG 257 (412)
T ss_dssp ----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHH
T ss_pred ----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHh
Confidence 0001157899999999997 35689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc----cCCCchhhhcCchhHHHHHHcCCCCCCCC---CCHHHHhcCcCCCCCc
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEPR 329 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~eiL~hp~~~~~~ 329 (712)
|++|||++ ||...... ..+..+.. ..+|.......+...+||.+||. +|.+| |+++++++||||+...
T Consensus 258 vilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~ 335 (412)
T 2vd5_A 258 VFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD 335 (412)
T ss_dssp HHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence 99999998 67654433 23333322 12232222334556699999999 99998 5999999999998764
Q ss_pred C
Q 005147 330 D 330 (712)
Q Consensus 330 ~ 330 (712)
.
T Consensus 336 w 336 (412)
T 2vd5_A 336 W 336 (412)
T ss_dssp S
T ss_pred H
Confidence 3
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-31 Score=284.61 Aligned_cols=208 Identities=16% Similarity=0.234 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccccc---cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~---~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++..... ...+++++++.+++|.+++.. .+++.++..++.||+.||.|||++||
T Consensus 72 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~i 147 (353)
T 3coi_A 72 RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGV 147 (353)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 5666788999999999988 5543322 235789999988899998843 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++...+..
T Consensus 148 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 179 (353)
T 3coi_A 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 179 (353)
T ss_dssp CCSSCCGGGEEECTTCCEEECSTTCTTC----------------------------------------------------
T ss_pred ccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....|+++|+|||.+.+ ..++.++|||||||++
T Consensus 180 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 214 (353)
T 3coi_A 180 ---------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214 (353)
T ss_dssp -------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHH
Confidence 001467999999999987 5689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-c----------------------------CCCchhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............... + .++.......+...+||.+||..||
T Consensus 215 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 294 (353)
T 3coi_A 215 AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 294 (353)
T ss_dssp HHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCT
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCc
Confidence 99998 66544322211111110 0 0011112234455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.++|+||||+....+
T Consensus 295 ~~Rpt~~e~l~hp~f~~~~~~ 315 (353)
T 3coi_A 295 DKRLTAAQALTHPFFEPFRDP 315 (353)
T ss_dssp TTSCCHHHHHTSGGGTTTCCG
T ss_pred ccCCCHHHHhcCcchhhccCc
Confidence 999999999999999987654
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=285.17 Aligned_cols=206 Identities=15% Similarity=0.220 Sum_probs=152.8
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+. ||||+.+++ ++.+. ....+++++++ .+++|.+++. .+++.+++.++.||+.||+|||++||+
T Consensus 79 ~E~~~l~~l~~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~iv 152 (330)
T 3nsz_A 79 REIKILENLRGGPNIITLAD-IVKDP-VSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIM 152 (330)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECT-TTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHcCCCCCEEEeee-eeccC-CCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4555677775 999999888 55432 23456666666 6899999883 389999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||+||+++.++ .+||+|||++.......
T Consensus 153 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 185 (330)
T 3nsz_A 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------------------------------------- 185 (330)
T ss_dssp CCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-----------------------------------------------
Confidence 999999999999776 89999999884332110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||++.+ ..++.++|||||||++
T Consensus 186 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 221 (330)
T 3nsz_A 186 --------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221 (330)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHHHH
Confidence 0001467999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---------------cCCCch---------------------hhhcCchhHHHHH
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---------------RVLPPQ---------------------LLLKFPKEASFCL 303 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---------------~~~~~~---------------------~~~~~~~~~~li~ 303 (712)
|+|++ ||.........+..+.. ...++. .....+...+||.
T Consensus 222 ~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 301 (330)
T 3nsz_A 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 301 (330)
T ss_dssp HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHH
T ss_pred HHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHH
Confidence 99998 66543322222211110 000000 0112345569999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+||..||.+|||+.|+|+||||+...
T Consensus 302 ~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 302 KLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp TTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHhcCCcccCCCHHHHhcCccHhhhc
Confidence 99999999999999999999999764
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=284.18 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=156.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-C-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|+.++||||+++++ ++. ....+++++++ . |.+|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 77 ~~E~~~l~~l~h~~Iv~~~~-~~~---~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~i 151 (335)
T 3dls_A 77 TLEIAILSRVEHANIIKVLD-IFE---NQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDI 151 (335)
T ss_dssp EHHHHHHTTCCCTTBCCEEE-EEE---CSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEe---eCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34666888999999999888 553 23456777775 3 449999996554 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++.......
T Consensus 152 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------------------------------------- 184 (335)
T 3dls_A 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------------------------------------- 184 (335)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred EEeccCHHHEEEcCCCcEEEeecccceECCCCC-----------------------------------------------
Confidence 999999999999999999999999884432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 185 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 220 (335)
T 3dls_A 185 --------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220 (335)
T ss_dssp --------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHH
Confidence 0011468999999999988886 8899999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... ......++ ....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 221 ~el~~g~~pf~~~~~~------~~~~~~~~--~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 221 YTLVFEENPFCELEET------VEAAIHPP--YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHSSCSCSSGGGG------TTTCCCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHhCCCchhhHHHH------HhhccCCC--cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 99998 55432211 11111111 112345569999999999999999999999999987543
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=297.20 Aligned_cols=204 Identities=16% Similarity=0.216 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ +|.+ ...+++++|+ .|++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 85 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 159 (494)
T 3lij_A 85 EEVAVLKLLDHPNIMKLYD-FFED---KRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIVH 159 (494)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4566789999999999888 5533 3456777777 5889999884443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++.. +.+||+|||++.......
T Consensus 160 ~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~---------------------------------------------- 193 (494)
T 3lij_A 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---------------------------------------------- 193 (494)
T ss_dssp SCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------------------------------------
T ss_pred ccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------------------------------------
Confidence 9999999999764 459999999884331110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++. ..|+.++|||||||++
T Consensus 194 ---------------------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il 227 (494)
T 3lij_A 194 ---------------------------------------------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVIL 227 (494)
T ss_dssp ---------------------------------------------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHH
Confidence 001146899999999986 4699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+....++ +.+....+...+||.+||..||.+|||+.++|+||||+..
T Consensus 228 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 228 FILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99998 66554433 333434333222 2233344556699999999999999999999999999764
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=297.00 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ...+++++|+. |++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|
T Consensus 65 ~Ei~~l~~l~HpnIv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH 139 (476)
T 2y94_A 65 REIQNLKLFRHPHIIKLYQ-VIST---PSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVH 139 (476)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 4556788999999999888 5533 24577888875 999999996543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 140 rDLkp~NIll~~~~~vkL~DFG~a~~~~~~~------------------------------------------------- 170 (476)
T 2y94_A 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGE------------------------------------------------- 170 (476)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCEECCTTC-------------------------------------------------
T ss_pred ccccHHHEEEecCCCeEEEeccchhhccccc-------------------------------------------------
Confidence 9999999999999999999999884331110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..+ +.++|||||||++|+
T Consensus 171 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 208 (476)
T 2y94_A 171 ------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA 208 (476)
T ss_dssp ------------------------------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence 0011468999999999988875 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||..... ......+....+.. .....+...+||.+||..||.+|||+.++++||||+...
T Consensus 209 lltG~~Pf~~~~~-~~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 209 LLCGTLPFDDDHV-PTLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp HHHSSCSSCCSSS-HHHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred HhhCCCCCCCCCH-HHHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 998 6654433 23344444333221 112345566999999999999999999999999998643
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=296.60 Aligned_cols=206 Identities=18% Similarity=0.234 Sum_probs=160.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ...+++++|++ |++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 169 (504)
T 3q5i_A 95 NEISLLKSLDHPNIIKLFD-VFED---KKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVH 169 (504)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788999999999888 5532 34677888874 889999985443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 170 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 203 (504)
T 3q5i_A 170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---------------------------------------------- 203 (504)
T ss_dssp SCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------------------------------------
T ss_pred CCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------------------------------------
Confidence 99999999998776 69999999884432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+ .|+.++|||||||++
T Consensus 204 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 237 (504)
T 3q5i_A 204 ---------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237 (504)
T ss_dssp ---------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHH
Confidence 0011468999999999864 599999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC--ch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP--PQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... .....+....+. .. +....+...+||.+||..||.+|||+.|+|+||||+....
T Consensus 238 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 238 YILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 99999 66554433 344444443332 22 2233455669999999999999999999999999986654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=277.41 Aligned_cols=205 Identities=17% Similarity=0.236 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|+.++||||+++++ ++. ....+++++|+ .|++|.+++.. .+..+++..++.|+.||+.||+|||++|
T Consensus 69 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 144 (285)
T 3is5_A 69 AEIEVLKSLDHPNIIKIFE-VFE---DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144 (285)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCchHHhHHH-hee---cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556788999999999888 553 23456777777 58899998832 2345899999999999999999999999
Q ss_pred ceeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 103 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 103 IvHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|+||||||+||+++ ..+.+||+|||++.......
T Consensus 145 ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 181 (285)
T 3is5_A 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE------------------------------------------- 181 (285)
T ss_dssp CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------------------------------------------
T ss_pred EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-------------------------------------------
Confidence 99999999999994 56789999999884332110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
......|++.|+|||.+. ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG 212 (285)
T 3is5_A 182 ------------------------------------------------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAG 212 (285)
T ss_dssp -----------------------------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHH
T ss_pred ------------------------------------------------cCcCcccccCcCChHHhc-cCCCcccCeehHH
Confidence 001146899999999985 4689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhh-cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|++|+|++ ||............. .....+.......+...+|+.+||..||.+|||+.|+|+||||+.
T Consensus 213 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 213 VVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999998 665543322222111 122222222223456669999999999999999999999999985
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=291.08 Aligned_cols=242 Identities=17% Similarity=0.143 Sum_probs=146.4
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCCCCce
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCF 113 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLkP~NI 113 (712)
+|+||+++++.+.........+++++|+.+++|.+++ ......+++.+++.|+.||+.||+|||++ ||+||||||+||
T Consensus 99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI 178 (397)
T 1wak_A 99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI 178 (397)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence 4889999888443333355688999999988888888 33445699999999999999999999998 999999999999
Q ss_pred eecCCCcEEEEecccccCCCC---CCcc-cccccccccccCCCCCCC-chhHHHhhhccccccccccCCCCCCccccccc
Q 005147 114 VMSSFNHVSFIESASCSDSGS---DSHE-EGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
|++.++.....+++....... .... ...... ..........+ .........+++.|||++...
T Consensus 179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~----------- 246 (397)
T 1wak_A 179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA-PATAGNFLVNPLEPKNAEKLKVKIADLGNACWV----------- 246 (397)
T ss_dssp EECCCHHHHHHHHHHHC----------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEET-----------
T ss_pred eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccC-CcccccccccccccccccccceEeccccccccc-----------
Confidence 998765211111111000000 0000 000000 00000000000 000011122333444433211
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 247 -----------------------------~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 289 (397)
T 1wak_A 247 -----------------------------HKH--------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289 (397)
T ss_dssp -----------------------------TBC--------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS
T ss_pred -----------------------------ccc--------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhC
Confidence 100 011468999999999999999999999999999999999
Q ss_pred --CCCCChh--------hHHHHHhhcccCCCchh---------------------------------------hhcCchh
Q 005147 268 --PFSTGEE--------KTRTMSSLRHRVLPPQL---------------------------------------LLKFPKE 298 (712)
Q Consensus 268 --pf~~~~~--------~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~ 298 (712)
||..... ....+..+.. ..|... ....+..
T Consensus 290 ~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
T 1wak_A 290 DYLFEPHSGEEYTRDEDHIALIIELLG-KVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGF 368 (397)
T ss_dssp SCSCCCCCCSSSCHHHHHHHHHHHHHC-SCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHH
T ss_pred CCCCCCCcccccCchHHHHHHHHHhcC-CCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHH
Confidence 6654321 1111111111 111100 0111234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.+||.+||..||++|||+.|+|+||||+.
T Consensus 369 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 369 TDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 58999999999999999999999999973
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=275.38 Aligned_cols=205 Identities=19% Similarity=0.265 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.+++.|+.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (277)
T 3f3z_A 55 QEIEIMKSLDHPNIIRLYE-TFE---DNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVAH 129 (277)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEe---cCCeEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 4556788899999999888 553 23456777777 5889999885443 4899999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.++++|||++........
T Consensus 130 ~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--------------------------------------------- 164 (277)
T 3f3z_A 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--------------------------------------------- 164 (277)
T ss_dssp CCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC---------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEEecccceeccCccc---------------------------------------------
Confidence 9999999999 7788999999998844321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....||+.|+|||.+.+. ++.++|||||||++
T Consensus 165 ----------------------------------------------~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l 197 (277)
T 3f3z_A 165 ----------------------------------------------MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM 197 (277)
T ss_dssp ----------------------------------------------BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHH
T ss_pred ----------------------------------------------hhccCCCCCccChHHhccc-CCchhhehhHHHHH
Confidence 0014689999999998665 99999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... .....+.... .+... ....+...+|+.+||..||.+|||+.++|+||||+...
T Consensus 198 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 198 YVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 99998 66554443 3333333332 22222 23345566999999999999999999999999997643
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=273.95 Aligned_cols=211 Identities=13% Similarity=0.148 Sum_probs=159.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (276)
T 2yex_A 54 KEICINKMLNHENVVKFYG-HRR---EGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (276)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---ETTEEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCceeeee-EEE---cCCEEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4455688899999999888 443 23456777777 578999999654 34999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+.........
T Consensus 129 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 161 (276)
T 2yex_A 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRE----------------------------------------------- 161 (276)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----------------------------------------------
T ss_pred cCCChHHEEEccCCCEEEeeCCCccccCCCcch-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
. ......|++.|+|||.+.+..+ +.++|||||||++|+
T Consensus 162 -------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 200 (276)
T 2yex_A 162 -------------------------------------R----LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 200 (276)
T ss_dssp -------------------------------------C----CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------h----cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHH
Confidence 0 0011468999999999987774 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||................. ..+......+...+||.+||..||.+|||+.++++||||+....
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 998 6655443323333322222 12222233455569999999999999999999999999997754
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=276.77 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=159.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. .....++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (284)
T 3kk8_A 54 REARICRKLQHPNIVRLHD-SIQ---EESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVH 128 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHcCCCCcCeEEE-EEE---cCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCc
Confidence 4556788899999999888 443 23456777777 588999988444 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++.++. ++++|||.+...+...
T Consensus 129 ~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 162 (284)
T 3kk8_A 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------------------------------------------- 162 (284)
T ss_dssp SCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------------------------------------
Confidence 999999999986655 9999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 197 (284)
T 3kk8_A 163 ---------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197 (284)
T ss_dssp ---------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHH
Confidence 00014689999999999999999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|+|++ ||...... .....+.... .+. ......+...+|+.+||+.||.+|||+.++|+||||+.....
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 198 YILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999 66554433 2333333222 222 222334556699999999999999999999999999876553
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=285.01 Aligned_cols=208 Identities=20% Similarity=0.253 Sum_probs=142.5
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+. ||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.|+.||+.||+|||++||+
T Consensus 54 ~e~~~l~~l~~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 54 KEITALKLCEGHPNIVKLHE-VFHD---QLHTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp HHHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCeeEEEE-EEEc---CCEEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 3445566665 999999888 5532 3456778887 588999999554 3499999999999999999999999999
Q ss_pred eccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++.++ .+||+|||++........
T Consensus 129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------- 164 (325)
T 3kn6_A 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-------------------------------------------- 164 (325)
T ss_dssp CCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------------------------------
T ss_pred ecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--------------------------------------------
Confidence 999999999998666 799999998843221100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i 198 (325)
T 3kn6_A 165 ----------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVI 198 (325)
T ss_dssp -----------------------------------------------------------------CCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHHHH
Confidence 0011467999999999999999999999999999
Q ss_pred HHHhhC---CCCCChh------hHHHHHhhcccCCC--chh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEE------KTRTMSSLRHRVLP--PQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~------~~~~~~~~~~~~~~--~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||..... ....+..+....++ ... ....+...+||.+||..||.+|||+.++++||||+...
T Consensus 199 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~ 278 (325)
T 3kn6_A 199 LYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS 278 (325)
T ss_dssp HHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred HHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence 999998 5653221 12344444443332 222 23345566999999999999999999999999998753
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=280.38 Aligned_cols=211 Identities=13% Similarity=0.151 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 73 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 148 (314)
T 3com_A 73 KEISIMQQCDSPHVVKYYG-SYFK---NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148 (314)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCccEEE-EEEe---CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 4556788899999999888 4422 3456777777 478999999644456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++|+|||.+........
T Consensus 149 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 180 (314)
T 3com_A 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDTMA------------------------------------------------ 180 (314)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECBTTBS------------------------------------------------
T ss_pred CCcCHHHEEECCCCCEEEeecccchhhhhhcc------------------------------------------------
Confidence 99999999999999999999998843311100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 181 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 218 (314)
T 3com_A 181 ------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218 (314)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHH
Confidence 00114679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||......................... .+...+||.+||..||.+|||+.++|+||||+.....
T Consensus 219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 219 AEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288 (314)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence 99 665443332222211111111111222 3445599999999999999999999999999987653
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=283.80 Aligned_cols=216 Identities=16% Similarity=0.182 Sum_probs=151.5
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|.. .+||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 59 ~E~~~l~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iv 133 (316)
T 2ac3_A 59 REVEMLYQCQGHRNVLELIE-FFEE---EDRFYLVFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKGIA 133 (316)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEee---CCEEEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 34445555 68999999888 5532 3467788887 489999999544 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++.++. +||+|||++........... .
T Consensus 134 H~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 173 (316)
T 2ac3_A 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP------------------------------I---------- 173 (316)
T ss_dssp CCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------------------------------
T ss_pred eCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc------------------------------c----------
Confidence 9999999999997766 99999998854321100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIY 256 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIw 256 (712)
.........||+.|+|||++.+ ..++.++|||
T Consensus 174 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 210 (316)
T 2ac3_A 174 -------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW 210 (316)
T ss_dssp ---------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHH
T ss_pred -------------------------------------------cccccccccCCcCccChHHhhcccccccCCCcccccH
Confidence 0000011468999999999975 4589999999
Q ss_pred HHHHHHHHhhC---CCCCChh--------------hHHHHHhhcccC--CCchhh-hcCchhHHHHHHcCCCCCCCCCCH
Q 005147 257 RLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~--------------~~~~~~~~~~~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
||||++|||++ ||..... .......+.... +|.... ...+...+||.+||..||.+|||+
T Consensus 211 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (316)
T 2ac3_A 211 SLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290 (316)
T ss_dssp HHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCH
Confidence 99999999999 6654321 112223333222 222222 234455699999999999999999
Q ss_pred HHHhcCcCCCCCcC
Q 005147 317 GELLQSEFLNEPRD 330 (712)
Q Consensus 317 ~eiL~hp~~~~~~~ 330 (712)
.|+|+||||+....
T Consensus 291 ~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 291 AQVLQHPWVQGCAP 304 (316)
T ss_dssp HHHHHSTTCC----
T ss_pred HHHhcChhhcCCCC
Confidence 99999999997543
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=295.43 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=141.9
Q ss_pred ceeeccCCCCCccccccccc------cccc--------------ccCceEEEEeeCCccHHHhhcCCCCCCChhHH----
Q 005147 29 GVELTHGDHLRNQGGLSGVC------ENEA--------------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 84 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~------~~~~--------------~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~---- 84 (712)
...|.. +||||++++..++ .... ....++++||+.+++|.+++...+..++....
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 345666 8999888654332 1000 11347999999889999999654444555555
Q ss_pred --HHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 85 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 85 --~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999999988533211
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
.....+++.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHH-HHh---hc--c-cCCCchhhhcCchhHHHHHHcCCCCC
Q 005147 243 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRT-MSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 243 ~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~-~~~---~~--~-~~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
++.+ ..++.++|||||||++|||++ ||......... +.. .. . ....+......+...+||.+||+.||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 669999999999999999998 55543211000 000 00 0 01111112234455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|||+.++|+||||+....
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHHH
Confidence 99999999999999986543
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=292.56 Aligned_cols=211 Identities=15% Similarity=0.171 Sum_probs=151.2
Q ss_pred eccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+|..+ +||||+++++ ++. ....+++++|+++++|.+++......++..++..|+.||+.||.|||++||+
T Consensus 65 ~~E~~~l~~l~~HpnIv~l~~-~~~---~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 140 (432)
T 3p23_A 65 DREVQLLRESDEHPNVIRYFC-TEK---DRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIV 140 (432)
T ss_dssp HHHHHHHHHSCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEe---cCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCE
Confidence 3555677777 8999999887 442 3456799999998999999976665577778899999999999999999999
Q ss_pred eccCCCCceeecCC-----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 105 VHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 105 HrDLkP~NIll~~~-----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
||||||+||+++.. ..+||+|||+++........ +
T Consensus 141 HrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~-------- 180 (432)
T 3p23_A 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS--------------------------------F-------- 180 (432)
T ss_dssp CCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----------------------------------------------
T ss_pred eCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc--------------------------------e--------
Confidence 99999999999532 25789999988543211000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 256 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIw 256 (712)
.......||++|+|||++.+ ..++.++|||
T Consensus 181 -----------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Diw 213 (432)
T 3p23_A 181 -----------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213 (432)
T ss_dssp ----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHH
T ss_pred -----------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHHH
Confidence 00011568999999999974 5578899999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||||++|||++ ||...... ...........+.. .....+...+||.+||+.||.+|||+.++|+||||...
T Consensus 214 SlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 214 SAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 99999999998 44322221 11111111111111 11112234589999999999999999999999999864
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=276.08 Aligned_cols=210 Identities=18% Similarity=0.215 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 140 (302)
T 2j7t_A 65 VEIEILATCDHPYIVKLLG-AYYH---DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140 (302)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeeeee-eeee---CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3455678899999999888 4432 2456777777 588999998654556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...... .
T Consensus 141 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------------------~-------------- 171 (302)
T 2j7t_A 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKT-----------------------------------L-------------- 171 (302)
T ss_dssp CCCSGGGEEECTTSCEEECCCHHHHHHHHH-----------------------------------H--------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCCcccccc-----------------------------------c--------------
Confidence 999999999999999999999976211000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-----cCCCCCCccchHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-----AGAPVSCASDIYRLGV 260 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~sDIwSlGv 260 (712)
. ......|++.|+|||.+ .+..++.++|||||||
T Consensus 172 ----------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 210 (302)
T 2j7t_A 172 ----------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 210 (302)
T ss_dssp ----------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHH
T ss_pred ----------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHH
Confidence 0 00114689999999998 4667899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCc-hhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++|+|++ ||........ ...+.....+. ..... .+...+++.+||..||.+|||+.++++||||......
T Consensus 211 il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 211 TLIEMAQIEPPHHELNPMRV-LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHhcCCCCCccCCHHHH-HHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 9999998 5554443322 22222222221 12223 3445599999999999999999999999999987664
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=301.46 Aligned_cols=207 Identities=14% Similarity=0.181 Sum_probs=159.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++||||+.+++ ++.+ ...++++||+ .|++|.+++... ...+++..++.|+.||+.||+|||++||+
T Consensus 233 ~E~~iL~~l~hp~Iv~l~~-~~~~---~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIv 308 (576)
T 2acx_A 233 NEKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308 (576)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHcCCCCEeeEEE-EEee---CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 3556788899999999887 5532 3467788887 599999999543 33489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.+||+|||++.......
T Consensus 309 HrDLKPeNILld~~g~vKL~DFGla~~~~~~~------------------------------------------------ 340 (576)
T 2acx_A 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------ 340 (576)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred ccCCchheEEEeCCCCeEEEecccceecccCc------------------------------------------------
Confidence 99999999999999999999999885431110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 341 -------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilye 377 (576)
T 2acx_A 341 -------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 377 (576)
T ss_dssp -------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence 0011478999999999999889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||..... .......+... .........+...+||.+||..||.+|| ++.|+++||||+...
T Consensus 378 LltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~ 452 (576)
T 2acx_A 378 MIAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452 (576)
T ss_dssp HHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred HHhCCCCCcccccchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence 999 6654321 12222222221 1111122345566999999999999999 799999999999753
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-31 Score=278.17 Aligned_cols=207 Identities=18% Similarity=0.235 Sum_probs=156.0
Q ss_pred eccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++... .....+++++|+.+++|.+++.. ....+++.+++.++.||+.||.|||++||+||||
T Consensus 68 l~~~~h~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dl 146 (326)
T 1blx_A 68 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 146 (326)
T ss_dssp HHHTCCTTBCCEEE-EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred hhccCCCCeEeeee-eeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence 33448999999888 44311 23457889999988899999943 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||++...+...
T Consensus 147 kp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 174 (326)
T 1blx_A 147 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 174 (326)
T ss_dssp CGGGEEECTTCCEEECSCCSCCCCCGGG----------------------------------------------------
T ss_pred CHHHeEEcCCCCEEEecCcccccccCCC----------------------------------------------------
Confidence 9999999999999999999884321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 175 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 215 (326)
T 1blx_A 175 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215 (326)
T ss_dssp ---------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence 0011467999999999999899999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCC------------------------chhhh-cCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLP------------------------PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~------------------------~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||............+.....+ ..... ..+...+||.+||..||.+|||+.++|
T Consensus 216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 295 (326)
T 1blx_A 216 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295 (326)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 665544332222211100000 00111 223345999999999999999999999
Q ss_pred cCcCCCCCcC
Q 005147 321 QSEFLNEPRD 330 (712)
Q Consensus 321 ~hp~~~~~~~ 330 (712)
+||||+....
T Consensus 296 ~hp~~~~~~~ 305 (326)
T 1blx_A 296 SHPYFQDLER 305 (326)
T ss_dssp TSGGGTTCCC
T ss_pred cCccccccch
Confidence 9999997754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=274.06 Aligned_cols=207 Identities=17% Similarity=0.227 Sum_probs=137.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+. +++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 135 (278)
T 3cok_A 60 NEVKIHCQLKHPSILELYN-YFED---SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH 135 (278)
T ss_dssp HHHHHHTTBCCTTBCCEEE-EEEC---SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeEeEEE-EEcc---CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4455688899999999888 5432 34567777774 88999999776667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 136 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 167 (278)
T 3cok_A 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHE------------------------------------------------ 167 (278)
T ss_dssp SSCCGGGEEECTTCCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEEeecceeeccCCCC------------------------------------------------
Confidence 99999999999999999999998843321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 205 (278)
T 3cok_A 168 ------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205 (278)
T ss_dssp ------------------------------------------------------------------CTHHHHHHHHHHHH
T ss_pred ------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHH
Confidence 00014679999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+++.+||..||.+|||+.++|+||||....
T Consensus 206 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 206 LIGRPPFDTDTVK-NTLNKVVLADYE-MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHSSCSSCCCSCC------CCSSCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HhCCCCCCChhHH-HHHHHHhhcccC-CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 98 55543322 112222111111 1111234556999999999999999999999999998754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=275.19 Aligned_cols=205 Identities=17% Similarity=0.220 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .+++|.+++.... .+++.++..++.||+.||+|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H 132 (279)
T 3fdn_A 58 REVEIQSHLRHPNILRLYG-YFHD---ATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIH 132 (279)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHcCCCCCCcchhh-eEec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3556788899999999888 5532 3456777777 5789999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......
T Consensus 133 ~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-------------------------------------------------- 162 (279)
T 3fdn_A 133 RDIKPENLLLGSAGELKIADFGWSVHAPSS-------------------------------------------------- 162 (279)
T ss_dssp CCCCGGGEEECTTSCEEECSCCEESCC-----------------------------------------------------
T ss_pred ccCChHhEEEcCCCCEEEEeccccccCCcc--------------------------------------------------
Confidence 999999999999999999999987332111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 200 (279)
T 3fdn_A 163 ------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200 (279)
T ss_dssp -----------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHH
Confidence 00114679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+ ......+...+||.+||..||.+|||+.++|+||||+....
T Consensus 201 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 201 LVGKPPFEANTYQ-ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred HHCCCCCCCCcHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 98 66544332 223332222111 11122344569999999999999999999999999986543
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=287.15 Aligned_cols=203 Identities=17% Similarity=0.196 Sum_probs=153.7
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++..+ +||||+++++ ++.+ ...++++||+ .|++|.+++...+ .+++.++..++.||+.||+|||++||+||||
T Consensus 68 ~l~~~~~hp~iv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~givHrDl 142 (342)
T 2qr7_A 68 ILLRYGQHPNIITLKD-VYDD---GKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDL 142 (342)
T ss_dssp HHHHHTTSTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHHhcCCCCcCeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeccC
Confidence 44444 8999999888 5532 3467788887 5899999996544 4999999999999999999999999999999
Q ss_pred CCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 109 RPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 109 kP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||+||++... +.+||+|||++........
T Consensus 143 kp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------- 175 (342)
T 2qr7_A 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENG----------------------------------------------- 175 (342)
T ss_dssp CGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-----------------------------------------------
T ss_pred CHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-----------------------------------------------
Confidence 9999998533 3599999998843211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 176 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 212 (342)
T 2qr7_A 176 -------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212 (342)
T ss_dssp -------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHH
Confidence 0011468999999999988789999999999999999
Q ss_pred hhC---CCCCC--hhhHHHHHhhcccCCC--chh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTG--EEKTRTMSSLRHRVLP--PQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~--~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||... ......+..+....++ ... ....+...+||.+||..||.+|||+.++|+||||...
T Consensus 213 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 213 MLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 999 66532 2233344444433322 222 2234455699999999999999999999999999653
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=284.42 Aligned_cols=211 Identities=15% Similarity=0.138 Sum_probs=154.6
Q ss_pred ceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhh--h
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH--S 100 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lH--s 100 (712)
...++.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..+..++.||+.||.||| +
T Consensus 70 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 149 (360)
T 3e3p_A 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS 149 (360)
T ss_dssp HHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 334677899999999883332211 112378899998778776552 34455899999999999999999999 9
Q ss_pred cCceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++. ++.+||+|||++.......
T Consensus 150 ~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 186 (360)
T 3e3p_A 150 VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE------------------------------------------- 186 (360)
T ss_dssp TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS-------------------------------------------
T ss_pred CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC-------------------------------------------
Confidence 99999999999999996 8999999999885432210
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 258 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSl 258 (712)
......||+.|+|||++.+.. ++.++|||||
T Consensus 187 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 218 (360)
T 3e3p_A 187 ------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218 (360)
T ss_dssp ------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHHHHHHH
Confidence 001146799999999997665 8999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-h---------------------hh--------hcCchhHHHHHHc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q---------------------LL--------LKFPKEASFCLWL 305 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~---------------------~~--------~~~~~~~~li~~~ 305 (712)
||++|+|++ ||..................++ . +. ...+...+||.+|
T Consensus 219 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 298 (360)
T 3e3p_A 219 GCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL 298 (360)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHH
Confidence 999999998 6665443322222211110110 0 00 0123455999999
Q ss_pred CCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 306 LHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 306 L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+.||.+|||+.|+|+||||+....
T Consensus 299 L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 299 LQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp TCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred hccCccccCCHHHHhcCccccccCC
Confidence 9999999999999999999997754
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=298.04 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=147.4
Q ss_pred eeeccCCCCCcccccccc------ccccc----------cc----CceEEEEeeCCccHHHhhcCCCC------CCChhH
Q 005147 30 VELTHGDHLRNQGGLSGV------CENEA----------AI----DPFVHAIEWGDVSLRQWLDKPKR------SVDVYE 83 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~------~~~~~----------~~----~~~~l~~e~~g~sL~~~l~~~~~------~l~~~~ 83 (712)
.+|+.++||||+++++.+ +++.. .. ...+++||+.+++|.+++...+. .+++..
T Consensus 128 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~ 207 (377)
T 3byv_A 128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207 (377)
T ss_dssp GGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHH
T ss_pred HhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHH
Confidence 567888999999987422 22111 00 13788899989999999954321 233488
Q ss_pred HHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 208 ~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------------- 259 (377)
T 3byv_A 208 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------------
Confidence 8899999999999999999999999999999999999999999988432110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
.....| +.|+|||+
T Consensus 260 -----------------------------------------------------------------~~~~~g-~~y~aPE~ 273 (377)
T 3byv_A 260 -----------------------------------------------------------------VVSSVS-RGFEPPEL 273 (377)
T ss_dssp -----------------------------------------------------------------EECCCC-TTCCCHHH
T ss_pred -----------------------------------------------------------------ccCCCC-cCccChhh
Confidence 011467 99999999
Q ss_pred ccCC-----------CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCC
Q 005147 244 LAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 244 ~~~~-----------~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (712)
+.+. .++.++|||||||++|||++ ||...... .....+... .....+...+||.+||..|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~~~-----~~~~~~~~~~li~~~L~~d 347 (377)
T 3byv_A 274 EARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIFRS-----CKNIPQPVRALLEGFLRYP 347 (377)
T ss_dssp HHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGSS-----CCCCCHHHHHHHHHHTCSS
T ss_pred hcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhhhh-----ccCCCHHHHHHHHHHcCCC
Confidence 9887 79999999999999999999 55432211 111111110 1122345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCc
Q 005147 310 PSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~ 329 (712)
|.+|||+.++|+||||+...
T Consensus 348 p~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 348 KEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp GGGCCCHHHHHTSHHHHHHH
T ss_pred chhCCCHHHHhhChHHHHHH
Confidence 99999999999999997643
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=276.24 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=146.8
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++...+..+ +||||+++++ ++. ....+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++
T Consensus 59 ~e~~~~~~l~~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 134 (289)
T 1x8b_A 59 REVYAHAVLGQHSHVVRYFS-AWA---EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134 (289)
T ss_dssp HHHHHHHHSCSCTTBCCEEE-EEE---ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCeeeeee-eee---cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444455666 9999999888 442 234677888875 88999999432 24489999999999999999999999
Q ss_pred CceeccCCCCceeecCCC-------------------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 102 GIVVHNVRPSCFVMSSFN-------------------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~-------------------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
||+||||||+||+++.++ .++++|||.+......
T Consensus 135 ~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------- 187 (289)
T 1x8b_A 135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------------------------- 187 (289)
T ss_dssp TEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---------------------------
T ss_pred CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---------------------------
Confidence 999999999999998555 5666666655221110
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
....|++.|+|||
T Consensus 188 -------------------------------------------------------------------~~~~gt~~y~aPE 200 (289)
T 1x8b_A 188 -------------------------------------------------------------------QVEEGDSRFLANE 200 (289)
T ss_dssp -------------------------------------------------------------------CCCCCCGGGCCHH
T ss_pred -------------------------------------------------------------------cccCCCccccChh
Confidence 0135799999999
Q ss_pred cccCC-CCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 243 ELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 243 ~~~~~-~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
++.+. .++.++|||||||++|+|++ |++..... ...+.....+.......+...+|+.+||..||.+|||+.++
T Consensus 201 ~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 277 (289)
T 1x8b_A 201 VLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL 277 (289)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 99876 46789999999999999999 33333222 23333333333333334556699999999999999999999
Q ss_pred hcCcCCCCCc
Q 005147 320 LQSEFLNEPR 329 (712)
Q Consensus 320 L~hp~~~~~~ 329 (712)
|+||||....
T Consensus 278 l~h~~~~~~~ 287 (289)
T 1x8b_A 278 VKHSVLLSAS 287 (289)
T ss_dssp HTCTTC----
T ss_pred hhChHhhhhc
Confidence 9999998753
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=280.99 Aligned_cols=204 Identities=21% Similarity=0.242 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++... .+++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 64 ~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (322)
T 2ycf_A 64 TEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENGIIH 137 (322)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4566788899999999888 55322 36777777 588999999554 45999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++.++. +||+|||++...+...
T Consensus 138 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 171 (322)
T 2ycf_A 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---------------------------------------------- 171 (322)
T ss_dssp CCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------------------------------------
T ss_pred cCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------------------------------------
Confidence 999999999987664 9999999885432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlG 259 (712)
......|++.|+|||++. ...++.++||||||
T Consensus 172 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 206 (322)
T 2ycf_A 172 ---------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206 (322)
T ss_dssp ---------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHHHHH
Confidence 000146899999999974 45689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccC--CCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|++|+|++ ||............+.... ..+... ...+...+||.+||..||.+|||+.++|+||||+.
T Consensus 207 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred HHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 99999999 5544332222222222222 222222 33445569999999999999999999999999985
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=282.42 Aligned_cols=213 Identities=17% Similarity=0.276 Sum_probs=159.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++.+.........++++||+. |++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 61 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH 139 (311)
T 3ork_A 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIH 139 (311)
T ss_dssp HHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 55667889999999998883332222223457777775 899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 140 ~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------- 172 (311)
T 3ork_A 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNS----------------------------------------------- 172 (311)
T ss_dssp CCCCGGGEEEETTSCEEECCCSCC--------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEeeccCcccccccccc-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........||+.|+|||++.+..++.++|||||||++|+|
T Consensus 173 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 212 (311)
T 3ork_A 173 ----------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212 (311)
T ss_dssp -------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence 0000114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchh-hh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQL-LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
++ ||..................++.. .. ..+...+||.+||..||.+||++.++|.|+|++.
T Consensus 213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 213 LTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99 776665554445555544444332 22 3345559999999999999999999999999763
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=278.63 Aligned_cols=208 Identities=19% Similarity=0.264 Sum_probs=155.9
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+..++..+ .||||+++++ ++. ....+++++|+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||+
T Consensus 78 e~~~l~~l~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 78 EIAVLELAKSCPRVINLHE-VYE---NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhccCCCCEEEEEE-EEE---eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 34445555 6799999888 553 23456777776 58899999843 345689999999999999999999999999
Q ss_pred eccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++. .+.+||+|||++...+...
T Consensus 154 H~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 188 (327)
T 3lm5_A 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--------------------------------------------- 188 (327)
T ss_dssp CSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------------------------------
T ss_pred cCcCChHHEEEecCCCCCcEEEeeCccccccCCcc---------------------------------------------
Confidence 9999999999987 7899999999885432110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||++.+..++.++|||||||+
T Consensus 189 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 222 (327)
T 3lm5_A 189 ----------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222 (327)
T ss_dssp ---------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHHHHH
Confidence 0001468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||.............. ...++. ......+...+||.+||..||.+|||+.++|+||||+....
T Consensus 223 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 223 AYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred HHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence 999998 6655444322222111 112222 22333445569999999999999999999999999987643
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=280.39 Aligned_cols=205 Identities=17% Similarity=0.239 Sum_probs=150.8
Q ss_pred cceeeccCCCCC------cccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~n------i~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..++..+.|+| ++.+++ ++. ....+++++|+.+++|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 61 e~~~l~~l~~~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 136 (339)
T 1z57_A 61 EIQVLEHLNTTDPNSTFRCVQMLE-WFE---HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136 (339)
T ss_dssp HHHHHHHHHHHCTTCTTCBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCCceeeEeeec-ccc---cCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 344566666654 777666 442 23478899999999999999443 3458999999999999999999999
Q ss_pred cCceeccCCCCceeecC-------------------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 101 QGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~-------------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
+||+||||||+||+++. ++.+|++|||++...+..
T Consensus 137 ~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------- 190 (339)
T 1z57_A 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------------------- 190 (339)
T ss_dssp TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC--------------------------
T ss_pred CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc--------------------------
Confidence 99999999999999987 556788877776321100
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.....||+.|+||
T Consensus 191 -------------------------------------------------------------------~~~~~gt~~y~aP 203 (339)
T 1z57_A 191 -------------------------------------------------------------------HSTLVSTRHYRAP 203 (339)
T ss_dssp -------------------------------------------------------------------CCSSCSCGGGCCH
T ss_pred -------------------------------------------------------------------cccccCCccccCh
Confidence 0014689999999
Q ss_pred ccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhh------------------------
Q 005147 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL------------------------ 292 (712)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~------------------------ 292 (712)
|++.+..++.++|||||||++|||++ ||........ .+..+. ...|....
T Consensus 204 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (339)
T 1z57_A 204 EVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGR 282 (339)
T ss_dssp HHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHH
T ss_pred HHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccc
Confidence 99999899999999999999999998 6654433221 111111 11111110
Q ss_pred -----------------hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 293 -----------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 293 -----------------~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
...+...+||.+||..||.+|||+.|+|+||||+....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 283 YVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred hhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 01123459999999999999999999999999987654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=282.64 Aligned_cols=215 Identities=18% Similarity=0.173 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------------------------------
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------------------------ 75 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------------------------------ 75 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++...
T Consensus 77 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (345)
T 3hko_A 77 TEVRLMKKLHHPNIARLYE-VYED---EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152 (345)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHS
T ss_pred HHHHHHHhCCCCCcceeeh-hhcc---CCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 3556788899999999888 5532 3457777777 599999998410
Q ss_pred ---------CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCC--cEEEEecccccCCCCCCcccccccc
Q 005147 76 ---------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQ 144 (712)
Q Consensus 76 ---------~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~ 144 (712)
...+++..++.|+.||+.||+|||++||+||||||+||+++.++ .+||+|||++.........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~------ 226 (345)
T 3hko_A 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG------ 226 (345)
T ss_dssp CC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc------
Confidence 11246788999999999999999999999999999999998776 8999999988532111000
Q ss_pred cccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCC
Q 005147 145 NMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQP 224 (712)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 224 (712)
T Consensus 227 -------------------------------------------------------------------------------- 226 (345)
T 3hko_A 227 -------------------------------------------------------------------------------- 226 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccCccccCcccccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCC-C-chhhhcCch
Q 005147 225 FPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-P-PQLLLKFPK 297 (712)
Q Consensus 225 ~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 297 (712)
.........||+.|+|||.+.+ ..++.++|||||||++|||++ ||............+..... + +......+.
T Consensus 227 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (345)
T 3hko_A 227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306 (345)
T ss_dssp --------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHH
T ss_pred ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHH
Confidence 0000011468999999999975 568999999999999999998 66655444333333322221 2 222233456
Q ss_pred hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
..+||.+||..||.+|||+.++|+||||+.....
T Consensus 307 ~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 6699999999999999999999999999987653
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=276.50 Aligned_cols=209 Identities=17% Similarity=0.192 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .+++|.+++... ..+++..+..++.||+.||.|||++||+|
T Consensus 51 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ivH 125 (311)
T 4agu_A 51 REIRMLKQLKHPNLVNLLE-VFR---RKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIH 125 (311)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCccchhh-eee---cCCeEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 4666788899999999888 553 23456777777 577788877544 44999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 126 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (311)
T 4agu_A 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSD------------------------------------------------ 157 (311)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCChhhEEEcCCCCEEEeeCCCchhccCccc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||.+.+ ..++.++|||||||++|+
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 195 (311)
T 4agu_A 158 ------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE 195 (311)
T ss_dssp --------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHH
Confidence 0001467999999999976 558999999999999999
Q ss_pred hhC---CCCCChhhHHHHH--hhcccC------------------CCc---------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMS--SLRHRV------------------LPP---------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~--~~~~~~------------------~~~---------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||........... ...... .+. ......+...+|+.+||..||.+
T Consensus 196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 275 (311)
T 4agu_A 196 LLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTE 275 (311)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTT
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhh
Confidence 998 6655433222111 110000 000 01122334558999999999999
Q ss_pred CCCHHHHhcCcCCCCCcC
Q 005147 313 RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+.++|+||||+....
T Consensus 276 Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 276 RLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp SCCHHHHHTSGGGTTCC-
T ss_pred cCCHHHHhcChHHHhccC
Confidence 999999999999998755
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-31 Score=278.22 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=153.5
Q ss_pred cceeeccC-CCCCccccccccccccc---ccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
+..++..+ +||||+++++ ++.... ....+++++|+. +++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 70 e~~~l~~l~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 148 (326)
T 2x7f_A 70 EINMLKKYSHHRNIATYYG-AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148 (326)
T ss_dssp HHHHHHHHCCSTTBCCEEE-EEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccCCCCeeeeee-EEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33456666 8999999888 443322 134677788875 78999999542 34589999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++|+|||++........
T Consensus 149 ~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------- 184 (326)
T 2x7f_A 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------------------------------------------- 184 (326)
T ss_dssp TCCCCCCSGGGEEECTTCCEEECCCTTTC---------------------------------------------------
T ss_pred CccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc--------------------------------------------
Confidence 999999999999999999999999998743211100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIY 256 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIw 256 (712)
......|++.|+|||++. +..++.++|||
T Consensus 185 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~ 218 (326)
T 2x7f_A 185 ----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 218 (326)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHC--------CCTTHHHH
T ss_pred ----------------------------------------------ccccccCCccccChhhhccccccCcCCCccchHH
Confidence 001146899999999997 45689999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||||++|+|++ ||........ ...+.....+...... .+...+||.+||..||.+|||+.++++||||+....
T Consensus 219 slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 295 (326)
T 2x7f_A 219 SLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN 295 (326)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence 99999999998 6654443322 2222222223222223 344559999999999999999999999999987653
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-31 Score=276.46 Aligned_cols=215 Identities=15% Similarity=0.152 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccc-----------cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-----------~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+++++ ++... .....+++++|+.+++|.+++.+ ..+++.+++.++.||+.||
T Consensus 57 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l 133 (320)
T 2i6l_A 57 REIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLLRGL 133 (320)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHHHHH
Confidence 4566788899999999887 44222 23357889999988899999954 3489999999999999999
Q ss_pred HHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
+|||++||+||||||+||+++ .++.+||+|||++..........
T Consensus 134 ~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------- 178 (320)
T 2i6l_A 134 KYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK----------------------------------- 178 (320)
T ss_dssp HHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC------------------------------------------
T ss_pred HHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccc-----------------------------------
Confidence 999999999999999999997 56789999999885432110000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~s 253 (712)
.......++++|+|||.+.+ ..++.++
T Consensus 179 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 206 (320)
T 2i6l_A 179 ----------------------------------------------------GHLSEGLVTKWYRSPRLLLSPNNYTKAI 206 (320)
T ss_dssp -----------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHH
T ss_pred ----------------------------------------------------cccccccccccccCcHHhcCcccCCchh
Confidence 00011457999999998866 5699999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCC---------------------------C-chh-hhcCchhHHH
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---------------------------P-PQL-LLKFPKEASF 301 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~---------------------------~-~~~-~~~~~~~~~l 301 (712)
|||||||++|||++ ||........ +..+..... + ... ....+...+|
T Consensus 207 Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (320)
T 2i6l_A 207 DMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDF 285 (320)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHH
T ss_pred hhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHH
Confidence 99999999999998 6655443222 222111100 0 001 1123455599
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
|.+||..||.+|||+.++|+||||+....+.
T Consensus 286 i~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 286 LEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 9999999999999999999999999776544
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=281.17 Aligned_cols=221 Identities=16% Similarity=0.200 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++... .....+++++|+.+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 58 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~iv 134 (353)
T 2b9h_A 58 REIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVI 134 (353)
T ss_dssp HHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5667788999999999888 44322 123578999999889999999543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||++........... .
T Consensus 135 H~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~------------------------------~------------- 171 (353)
T 2b9h_A 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS------------------------------E------------- 171 (353)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECC---------------------------------------------------
T ss_pred cCCCCHHHeEEcCCCcEEEEeccccccccccccccc------------------------------C-------------
Confidence 999999999999999999999999865432210000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
. ...........||++|+|||++.+ ..++.++|||||||++|
T Consensus 172 -~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ 214 (353)
T 2b9h_A 172 -P------------------------------------TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214 (353)
T ss_dssp ---------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred -c------------------------------------cccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHH
Confidence 0 000000112578999999998765 66999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhc--cc-----------------------CCCc-----hhhhcCchhHHHHHHcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLR--HR-----------------------VLPP-----QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~--~~-----------------------~~~~-----~~~~~~~~~~~li~~~L~~dP 310 (712)
+|++ ||.............. .. ..+. ......+...+||.+||..||
T Consensus 215 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 294 (353)
T 2b9h_A 215 ELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294 (353)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc
Confidence 9998 6655433222111100 00 0000 011233455599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+|||+.++|+||||+....
T Consensus 295 ~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 295 AKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp GGSCCHHHHHTSGGGTTTCC
T ss_pred ccCCCHHHHhcCccccccCC
Confidence 99999999999999987654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=284.66 Aligned_cols=205 Identities=18% Similarity=0.261 Sum_probs=136.3
Q ss_pred eeccCCCCCcccccccccccc-cccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.+..++||||+.+++ ++... .....+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++||+|||
T Consensus 75 ~~~~~~h~~i~~~~~-~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~d 153 (336)
T 3fhr_A 75 HWQASGGPHIVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 153 (336)
T ss_dssp HHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhcCCCChHHHHH-HHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 356689999999988 55332 2244577888875 88999999554 34699999999999999999999999999999
Q ss_pred CCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 108 VRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 108 LkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||+||+++.+ +.+||+|||++.......
T Consensus 154 lkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 185 (336)
T 3fhr_A 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------ 185 (336)
T ss_dssp CSGGGEEESCSSTTCCEEECCCTTCEEC----------------------------------------------------
T ss_pred CCHHHEEEEecCCCceEEEeccccceeccccc------------------------------------------------
Confidence 99999999864 459999999884321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....||+.|+|||++.+..++.++|||||||++|+
T Consensus 186 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~ 221 (336)
T 3fhr_A 186 --------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 221 (336)
T ss_dssp --------------------------------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHH
Confidence 001467999999999988889999999999999999
Q ss_pred hhC---CCCCChhhHH---HHHhhcc--cCCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTR---TMSSLRH--RVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~---~~~~~~~--~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||........ ....+.. ...+. ......+...+||.+||..||.+|||+.++|+||||+..
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 999 5543322111 0111111 11122 222334455699999999999999999999999999865
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.39 Aligned_cols=204 Identities=18% Similarity=0.221 Sum_probs=155.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+ +||||+.+++ ++. ....+++++|+ .|++|.+++... ..+++..+..++.||+.||.|||++||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLID-SYE---SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEE---BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEe---eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344456666 8999999887 442 23457777777 588999999543 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 223 H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~------------------------------------------------ 254 (365)
T 2y7j_A 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGE------------------------------------------------ 254 (365)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEEecCcccccCCCc------------------------------------------------
Confidence 99999999999999999999999874321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC------CCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~sDIwSl 258 (712)
......||+.|+|||++.+ ..++.++|||||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 255 -------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred -------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 0011468999999999853 358899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|+|++ ||...... .....+...... +.+....+...+||.+||..||.+|||+.++|+||||+.
T Consensus 292 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 292 GVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 999999999 66544332 333333333222 122233445669999999999999999999999999973
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=280.77 Aligned_cols=194 Identities=19% Similarity=0.246 Sum_probs=144.4
Q ss_pred CcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhh--hcCceeccCCCCceee
Q 005147 39 RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH--SQGIVVHNVRPSCFVM 115 (712)
Q Consensus 39 ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lH--s~gIvHrDLkP~NIll 115 (712)
+++.+++ ++. ....+++++|+.+++|.+++... ...+++..++.|+.||+.||.||| ..||+||||||+|||+
T Consensus 117 ~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 117 YIVHLKR-HFM---FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192 (382)
T ss_dssp GBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEE
T ss_pred eEEEeee-eec---cCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEE
Confidence 3677665 332 23578999999888999999443 345899999999999999999999 4799999999999999
Q ss_pred c--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 116 S--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 116 ~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
+ ..+.+||+|||++...+..
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~---------------------------------------------------------- 214 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQR---------------------------------------------------------- 214 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCC----------------------------------------------------------
T ss_pred ecCCCCcEEEEeccCceecccc----------------------------------------------------------
Confidence 5 4678999999988443211
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCC
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
.....||+.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 215 -----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 215 -----------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp -----------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred -----------------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 001468999999999999999999999999999999999 666
Q ss_pred CChhhHHHHHhhcc-cCCCchhhh--------------------------------------------------------
Q 005147 271 TGEEKTRTMSSLRH-RVLPPQLLL-------------------------------------------------------- 293 (712)
Q Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~-------------------------------------------------------- 293 (712)
.............. +..+.....
T Consensus 260 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 339 (382)
T 2vx3_A 260 GANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 339 (382)
T ss_dssp CSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCT
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccc
Confidence 54433222111111 111110000
Q ss_pred -----cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 -----KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 -----~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+...+||.+||+.||++|||+.|+|+||||+...
T Consensus 340 ~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred cccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 001345999999999999999999999999998753
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=272.52 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=157.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+. +++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 63 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 137 (284)
T 2vgo_A 63 REIEIQSHLRHPNILRMYN-YFHD---RKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIH 137 (284)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhcCCCCCEeeEEE-EEEc---CCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 3455788899999999888 4432 34677888875 789999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......
T Consensus 138 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 167 (284)
T 2vgo_A 138 RDIKPENLLMGYKGELKIADFGWSVHAPSL-------------------------------------------------- 167 (284)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECSSS--------------------------------------------------
T ss_pred cCCCHHHEEEcCCCCEEEecccccccCccc--------------------------------------------------
Confidence 999999999999999999999987322110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 205 (284)
T 2vgo_A 168 ------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205 (284)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHH
Confidence 00014679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||....... ....+...... ......+...++|.+||..||.+|||+.++++||||+...
T Consensus 206 ~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 206 LVGMPPFDSPSHTE-THRRIVNVDLK-FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp HHSSCTTCCSSHHH-HHHHHHTTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred HHCCCCCCCCCHhH-HHHHHhccccC-CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 98 665443332 22222222111 1112234556999999999999999999999999998543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=301.26 Aligned_cols=202 Identities=17% Similarity=0.241 Sum_probs=157.7
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+|..+ .||||+.+++ ++. ....++++||| .|++|.++|...+ .+++.+++.|+.||+.||+|||++|||||||
T Consensus 394 ~l~~~~~~~~i~~l~~-~~~---~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDL 468 (674)
T 3pfq_A 394 VLALPGKPPFLTQLHS-CFQ---TMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468 (674)
T ss_dssp HHTCTTCCTTBCCEEE-ECB---CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEECCCC
T ss_pred HHHhccCCCeEEEEEE-EEE---eCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeccC
Confidence 45544 7899999877 443 23457778877 5899999995543 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||||+.++.+||+|||+++......
T Consensus 469 Kp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------------------------- 496 (674)
T 3pfq_A 469 KLDNVMLDSEGHIKIADFGMCKENIWDG---------------------------------------------------- 496 (674)
T ss_dssp CSTTEEECSSSCEEECCCTTCEECCCTT----------------------------------------------------
T ss_pred ChhhEEEcCCCcEEEeecceeeccccCC----------------------------------------------------
Confidence 9999999999999999999885321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......+||+.|+|||++.+..|+.++|||||||+||||++
T Consensus 497 --------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG 538 (674)
T 3pfq_A 497 --------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538 (674)
T ss_dssp --------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcC
Confidence 00011579999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~~ 329 (712)
||...... ..+..+...... ......+...+||.+||..||.+||++ ++|++||||+...
T Consensus 539 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~ 605 (674)
T 3pfq_A 539 QAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605 (674)
T ss_dssp SCSSCCSSHH-HHHHHHHSSCCC-CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred CCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence 77655443 344444433221 112234556699999999999999997 9999999999764
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=276.00 Aligned_cols=203 Identities=15% Similarity=0.105 Sum_probs=153.1
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+++.++||||+++++ ++. ...+++++++ .+++|.+++......+++..++.|+.||+.||.|||++||+
T Consensus 63 ~~e~~~l~~l~h~~iv~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 137 (325)
T 3kex_A 63 TDHMLAIGSLDHAHIVRLLG-LCP----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137 (325)
T ss_dssp CHHHHHHHTCCCTTBCCEEE-EEC----BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCcCeEEE-EEc----CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34555788899999999988 553 2334555555 78999999976655699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 138 H~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 171 (325)
T 3kex_A 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ---------------------------------------------- 171 (325)
T ss_dssp CSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC----------------------------------------------
T ss_pred CCccchheEEECCCCeEEECCCCcccccCccccc----------------------------------------------
Confidence 9999999999999999999999998554222000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 209 (325)
T 3kex_A 172 ------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 209 (325)
T ss_dssp ------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHH
Confidence 00011357889999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 210 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 210 LMTFGAEPYAGLRL-AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHTTSCCTTTTSCT-THHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHhCCCCCccccCH-HHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 997 5543322 22333333332222223344566699999999999999999999874
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=273.11 Aligned_cols=215 Identities=15% Similarity=0.207 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..++..+.||||+++++ ++.. ...+++++|+ .|++|.+++.. ....+++.+++.++.||+.||.||
T Consensus 62 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 137 (303)
T 2vwi_A 62 KEIQAMSQCHHPNIVSYYT-SFVV---KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137 (303)
T ss_dssp ----CCCCCCCTTBCCEEE-EEES---SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCEeeEEE-EEee---cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 5566788899999999887 4432 2356777777 58999999842 234589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++.++.++++|||++....... ++
T Consensus 138 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~------- 177 (303)
T 2vwi_A 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DI------- 177 (303)
T ss_dssp HHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------------------------------------
T ss_pred HhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Cc-------
Confidence 99999999999999999999999999999874332110 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwS 257 (712)
. .........|++.|+|||.+.+ ..++.++||||
T Consensus 178 -------------------------~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 212 (303)
T 2vwi_A 178 -------------------------T--------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 212 (303)
T ss_dssp -------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHH
T ss_pred -------------------------c--------------------chhhhcccCCCccccCHHHhccccCCCchhhHHH
Confidence 0 0000011468999999999875 45899999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcccCCC-------chhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-------PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|||++|+|++ ||.........+..+...... ...... .+...+++.+||..||.+|||+.++++||||+
T Consensus 213 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 292 (303)
T 2vwi_A 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292 (303)
T ss_dssp HHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred HHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhh
Confidence 9999999998 666544433333332222111 011112 23455899999999999999999999999998
Q ss_pred CCcC
Q 005147 327 EPRD 330 (712)
Q Consensus 327 ~~~~ 330 (712)
....
T Consensus 293 ~~~~ 296 (303)
T 2vwi_A 293 KAKN 296 (303)
T ss_dssp ----
T ss_pred cCCC
Confidence 7543
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=281.94 Aligned_cols=202 Identities=20% Similarity=0.269 Sum_probs=148.5
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCCCCce
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCF 113 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLkP~NI 113 (712)
.||||+++++.+.........+++++++.|++|.+++.. ....+++.+++.|+.||+.||+|||++ ||+||||||+||
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NI 163 (373)
T 1q8y_A 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 163 (373)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred ccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHe
Confidence 389999999844333334457899999999999999944 344599999999999999999999998 999999999999
Q ss_pred eecC------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 114 VMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 114 ll~~------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|++. .+.+||+|||++...+..
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~---------------------------------------------------- 191 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEH---------------------------------------------------- 191 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBC----------------------------------------------------
T ss_pred EEeccCCCcCcceEEEcccccccccCCC----------------------------------------------------
Confidence 9953 347999999987432110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 192 -----------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 230 (373)
T 1q8y_A 192 -----------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230 (373)
T ss_dssp -----------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh
Confidence 001467999999999999999999999999999999999
Q ss_pred ---CCCCChh-----hHHHHHhhcc--cCCCchh---------------------------------------hhcCchh
Q 005147 268 ---PFSTGEE-----KTRTMSSLRH--RVLPPQL---------------------------------------LLKFPKE 298 (712)
Q Consensus 268 ---pf~~~~~-----~~~~~~~~~~--~~~~~~~---------------------------------------~~~~~~~ 298 (712)
||..... .......+.. +..|... ....+..
T Consensus 231 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
T 1q8y_A 231 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310 (373)
T ss_dssp SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHH
Confidence 5653321 0111111110 1111110 0112234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+||.+||..||.+|||+.|+|+||||+....
T Consensus 311 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp HHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred HHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence 48999999999999999999999999997643
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-30 Score=294.04 Aligned_cols=207 Identities=16% Similarity=0.186 Sum_probs=158.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+..+|+.++||||+.+++ ++.. ...+|++||+ .|++|.++|... ...+++..++.|+.||+.||+|||++||
T Consensus 235 E~~iL~~l~hp~Iv~l~~-~~~~---~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI 310 (543)
T 3c4z_A 235 EKKILAKVHSRFIVSLAY-AFET---KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310 (543)
T ss_dssp HHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhcCCCCEeeEEE-EEee---CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 455688899999999887 4432 3457777777 589999999543 3458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.+|.+||+|||+++.......
T Consensus 311 vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~---------------------------------------------- 344 (543)
T 3c4z_A 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT---------------------------------------------- 344 (543)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC----------------------------------------------
T ss_pred cccCCChHHEEEeCCCCEEEeecceeeeccCCCc----------------------------------------------
Confidence 9999999999999999999999999854321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 345 --------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvily 380 (543)
T 3c4z_A 345 --------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380 (543)
T ss_dssp --------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred HhhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||++ ||..... .......+..... .......+...+||.+||..||.+||+ +.+|++||||+...
T Consensus 381 elltG~~PF~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~ 456 (543)
T 3c4z_A 381 EMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456 (543)
T ss_dssp HHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred HHHhCCCCCCCCccchhHHHHHHHHhhccc-CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence 9999 6654321 1223333322211 111223455569999999999999996 58999999999753
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-31 Score=284.73 Aligned_cols=208 Identities=10% Similarity=0.067 Sum_probs=151.5
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
.+..+.||||+++++.+.........++++||+.|++|.+++......+++.+++.|+.||+.||+|||++||+||||||
T Consensus 101 ~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp 180 (364)
T 3op5_A 101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA 180 (364)
T ss_dssp HHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred HHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCH
Confidence 45678899999998844433333456788888889999999966656699999999999999999999999999999999
Q ss_pred Cceeec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 111 SCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 111 ~NIll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
+|||++ .++.+||+|||+++.......... +
T Consensus 181 ~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~------------------------------~----------------- 213 (364)
T 3op5_A 181 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA------------------------------Y----------------- 213 (364)
T ss_dssp GGEEEESSCTTCEEECCCTTCEESSGGGCCCC------------------------------S-----------------
T ss_pred HHEEEecCCCCeEEEEECCcceecccCCcccc------------------------------c-----------------
Confidence 999999 889999999999854322100000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 214 ------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g 257 (364)
T 3op5_A 214 ------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257 (364)
T ss_dssp ------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 0000011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhcc---cCCCchh------hhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 --PFSTGEEKTRTMSSLRH---RVLPPQL------LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||............... ...+... ....+...+++..||..+|.+||++.+|++
T Consensus 258 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 258 HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 66532111111111110 0111111 112344559999999999999999999876
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-31 Score=284.82 Aligned_cols=205 Identities=18% Similarity=0.167 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+++++ ++.. ...+++++|+. |++|.+++.... .+++..+..|+.||+.||.|||++ ||+
T Consensus 80 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~i~ 154 (360)
T 3eqc_A 80 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIM 154 (360)
T ss_dssp HHHGGGGGCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHCCCCCEEEEeE-EEEE---CCEEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5566788899999999888 4432 34577888885 889999995543 489999999999999999999996 999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++|+|||++......
T Consensus 155 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------- 185 (360)
T 3eqc_A 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 185 (360)
T ss_dssp CSCCSGGGEEECTTCCEEECCCCCCHHHHHH-------------------------------------------------
T ss_pred cCCccHHHEEECCCCCEEEEECCCCcccccc-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++.+..++.++|||||||++|+
T Consensus 186 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 222 (360)
T 3eqc_A 186 -------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222 (360)
T ss_dssp -------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHH-----------------------------------------HhhcccCCCchhhhc-CchhH
Q 005147 265 LFC---PFSTGEEKTRTM-----------------------------------------SSLRHRVLPPQLLLK-FPKEA 299 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~-~~~~~ 299 (712)
|++ ||.......... ..+.....+...... .+...
T Consensus 223 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
T 3eqc_A 223 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 302 (360)
T ss_dssp HHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHH
T ss_pred HHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHH
Confidence 998 665443221110 111111111111112 23455
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+||.+||..||.+|||+.++|+||||+..
T Consensus 303 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 303 DFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 99999999999999999999999999754
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-30 Score=274.28 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=159.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+. |++|.+++...+ .+++.++..++.||+.||.|||++||+|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (304)
T 2jam_A 55 NEIAVLKKIKHENIVTLED-IYES---TTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVH 129 (304)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCeeehhh-hccc---CCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 34677788874 889999985433 4899999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.++++|||++......
T Consensus 130 ~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 162 (304)
T 2jam_A 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----------------------------------------------- 162 (304)
T ss_dssp CSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------------------------------------
T ss_pred cCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------------------------------------
Confidence 9999999999 67889999999987432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (304)
T 2jam_A 163 ---------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197 (304)
T ss_dssp ---------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHHHH
Confidence 00014589999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... .....+..... +... ....+...+||.+||..||.+|||+.++|+||||....
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 269 (304)
T 2jam_A 198 YILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT 269 (304)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence 99999 56544332 33333333322 2222 22334556999999999999999999999999998754
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=270.38 Aligned_cols=205 Identities=18% Similarity=0.249 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+. +++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 57 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 131 (283)
T 3bhy_A 57 REVNILREIRHPNIITLHD-IFEN---KTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAH 131 (283)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeehhh-eecC---CCeEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4555788899999999888 5532 34567777774 89999999543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .++++|||.+.......
T Consensus 132 ~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------- 166 (283)
T 3bhy_A 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--------------------------------------------- 166 (283)
T ss_dssp SCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------------------------------
T ss_pred CCCChHHEEEecCCCCCCceEEEecccceeccCCC---------------------------------------------
Confidence 99999999998777 79999999874321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 167 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 200 (283)
T 3bhy_A 167 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200 (283)
T ss_dssp ---------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHH
Confidence 0001457999999999998899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||...... .....+.... .+...... .+...+|+.+||..||.+|||+.++|+||||+..
T Consensus 201 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 201 TYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 999998 66554333 2333332222 22222233 3445599999999999999999999999999864
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=276.86 Aligned_cols=208 Identities=18% Similarity=0.226 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHh------hcCC-CCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~------l~~~-~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.++ +... ...+++.+++.++.||+.||.||
T Consensus 92 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l 167 (348)
T 2pml_X 92 NELQIITDIKNEYCLTCEG-IITN---YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI 167 (348)
T ss_dssp HHHHHHTTCCCTTBCCCSE-EEES---SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcceEEE-EEee---CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 4556788899999999888 5533 3467778887 47799999 6432 45699999999999999999999
Q ss_pred hh-cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 99 HS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 99 Hs-~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------ 205 (348)
T 2pml_X 168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK------------------------------------------ 205 (348)
T ss_dssp HHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT------------------------------------------
T ss_pred hccCCEeecCCChHhEEEcCCCcEEEeccccccccccc------------------------------------------
Confidence 99 99999999999999999999999999988432111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCC-ccch
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-ASDI 255 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~-~sDI 255 (712)
......|++.|+|||.+.+. .++. ++||
T Consensus 206 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 235 (348)
T 2pml_X 206 --------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235 (348)
T ss_dssp --------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred --------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence 00114679999999999887 5666 9999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchh------------------hhcCchhHHHHHHcCCCCCCCCC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL------------------LLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|||||++|+|++ ||............+.....+... ....+...+||.+||..||.+||
T Consensus 236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 999999999998 666544433444444433221110 22234555999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.++|+||||+....
T Consensus 316 s~~e~l~hp~f~~~~~ 331 (348)
T 2pml_X 316 TSEDALKHEWLADTNI 331 (348)
T ss_dssp CHHHHHTSGGGTTCCH
T ss_pred CHHHHhcCccccCCCH
Confidence 9999999999997643
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=272.35 Aligned_cols=210 Identities=19% Similarity=0.169 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.. ...+++++|+. |++|.+++... ...+++..+..++.||+.||.|||++||
T Consensus 68 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 143 (295)
T 2clq_A 68 EEIALHKHLKHKNIVQYLG-SFSE---NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143 (295)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhCCCCCEeeEee-EEEe---CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4556788899999999888 4432 34567777774 89999999543 2346788899999999999999999999
Q ss_pred eeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|+||||+||+++. ++.++|+|||.+........
T Consensus 144 ~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 178 (295)
T 2clq_A 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--------------------------------------------- 178 (295)
T ss_dssp ECCCCSGGGEEEETTTCCEEECCTTTCEESCC------------------------------------------------
T ss_pred EccCCChhhEEEECCCCCEEEeecccccccCCCCC---------------------------------------------
Confidence 99999999999987 89999999998843321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGv 260 (712)
......|++.|+|||++.+.. ++.++|||||||
T Consensus 179 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 213 (295)
T 2clq_A 179 ---------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213 (295)
T ss_dssp -----------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHH
Confidence 000146799999999997654 889999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhh-cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|+|++ ||.........+... .....+.......+...+|+.+||..||++|||+.++|+||||+....
T Consensus 214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 214 TIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp HHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred HHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence 9999999 554322222222221 112222222223445569999999999999999999999999987643
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=277.03 Aligned_cols=207 Identities=20% Similarity=0.251 Sum_probs=152.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+. +++|.+++.... .+++..+..|+.||+.||.|||++||+|
T Consensus 73 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH 147 (331)
T 4aaa_A 73 REIKLLKQLRHENLVNLLE-VCK---KKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIH 147 (331)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhCCCCCEeeEEE-Eee---cCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 4666788899999999888 553 334677888874 667777664443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 179 (331)
T 4aaa_A 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGE------------------------------------------------ 179 (331)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTC--------------------------------------------------------
T ss_pred cCcChheEEEcCCCcEEEEeCCCceeecCCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||.+.+. .++.++|||||||++|+
T Consensus 180 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 217 (331)
T 4aaa_A 180 ------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE 217 (331)
T ss_dssp ----------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHH
Confidence 00014679999999999876 58999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc-cCCCc----------------------------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~-~~~~~----------------------------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||............... ...++ ......+...+|+.+||..||.+
T Consensus 218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 297 (331)
T 4aaa_A 218 MFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297 (331)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence 999 66554433222211110 00000 01112344559999999999999
Q ss_pred CCCHHHHhcCcCCCCC
Q 005147 313 RPKMGELLQSEFLNEP 328 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~ 328 (712)
|||+.|+|+||||+..
T Consensus 298 Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 298 RPFCAELLHHDFFQMD 313 (331)
T ss_dssp SCCGGGGGGSHHHHGG
T ss_pred CCCHHHHhcCchhccC
Confidence 9999999999999864
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=280.97 Aligned_cols=207 Identities=18% Similarity=0.209 Sum_probs=153.4
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|.++ +||||+.+++ ++.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 108 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 182 (355)
T 1vzo_A 108 ERQVLEHIRQSPFLVTLHY-AFQT---ETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIY 182 (355)
T ss_dssp HHHHHHHHHTCTTBCCEEE-EEEE---TTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHccCCCceeEEEE-EEee---CceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 44456777 6999999887 4422 3457778887 5889999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 183 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------- 215 (355)
T 1vzo_A 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETE----------------------------------------------- 215 (355)
T ss_dssp CCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-----------------------------------------------
T ss_pred CCCCHHHEEECCCCcEEEeeCCCCeecccCCCC-----------------------------------------------
Confidence 999999999999999999999988533111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 216 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ 253 (355)
T 1vzo_A 216 ------------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253 (355)
T ss_dssp ------------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 00114689999999999864 3789999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||++ ||.... ........+... .++......+...+||.+||..||.+|| |+.++++||||....
T Consensus 254 ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~ 329 (355)
T 1vzo_A 254 ELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329 (355)
T ss_dssp HHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred HHHHCCCCCccCCccchHHHHHHHHhcc-CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence 9999 664321 111222222221 1222222334556999999999999999 999999999998753
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=268.88 Aligned_cols=212 Identities=15% Similarity=0.179 Sum_probs=158.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++.++ ......+++++|+..++|.+++. .....+++.++..++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 132 (305)
T 2wtk_C 55 KEIQLLRRLRHKNVIQLVDVLY--NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132 (305)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEE--CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeEEEEEEE--cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4455788899999999988333 23345788899997777888873 33456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 133 ~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 165 (305)
T 2wtk_C 133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAAD----------------------------------------------- 165 (305)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECCTTCSS-----------------------------------------------
T ss_pred cCCCcccEEEcCCCcEEeeccccccccCccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~ 263 (712)
.......|++.|+|||++.+.. ++.++|||||||++|
T Consensus 166 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~ 204 (305)
T 2wtk_C 166 -----------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY 204 (305)
T ss_dssp -----------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHH
Confidence 0001145899999999997654 478999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|++ ||..... ......+.....+ ......+...+||.+||..||.+|||+.++++||||+....
T Consensus 205 ~l~~g~~p~~~~~~-~~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 205 NITTGLYPFEGDNI-YKLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHSSCSCCCSSH-HHHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHhCCCCCCCchH-HHHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 9998 6654433 2333333333221 11123345569999999999999999999999999987644
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-30 Score=274.33 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|..++||||+++++ ++.. .....+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||+|||++||
T Consensus 56 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 133 (319)
T 4euu_A 56 REFEVLKKLNHKNIVKLFA-IEEE-TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133 (319)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC-TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCcceEEE-Eeec-CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 5556788899999999988 4432 333466777777 4899999995432 238999999999999999999999999
Q ss_pred eeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 104 VVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 104 vHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||||||+||++ +..+.+||+|||+++......
T Consensus 134 vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------- 170 (319)
T 4euu_A 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------- 170 (319)
T ss_dssp ECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred ecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-------------------------------------------
Confidence 999999999999 777889999999885432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--------CCCCCC
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPVSC 251 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~ 251 (712)
......||+.|+|||++. +..++.
T Consensus 171 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 202 (319)
T 4euu_A 171 ------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202 (319)
T ss_dssp ------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCT
T ss_pred ------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCCCc
Confidence 000146899999999986 567999
Q ss_pred ccchHHHHHHHHHhhC---CCCCC---hhhHHHHHhhcccCCCc-----------------------hhhhcC-chhHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKF-PKEASF 301 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~---~~~~~~~~~~~~~~~~~-----------------------~~~~~~-~~~~~l 301 (712)
++|||||||++|||++ ||.+. ......+..+.....+. .+.... +...+|
T Consensus 203 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 282 (319)
T 4euu_A 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (319)
T ss_dssp THHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHH
Confidence 9999999999999998 55432 22233333333222110 011111 233489
Q ss_pred HHHcCCCCCCCCCCHHHHhcCc
Q 005147 302 CLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp 323 (712)
+.+||..||++|||+.|+|+||
T Consensus 283 l~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 283 LANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHhccCChhhhccHHHhhhcc
Confidence 9999999999999999999987
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=279.24 Aligned_cols=205 Identities=20% Similarity=0.216 Sum_probs=154.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC---------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--------------------------- 77 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--------------------------- 77 (712)
++..++..+ +||||+++++ ++.+ ....+++++|+ .|++|.+++.....
T Consensus 74 ~E~~~l~~l~~hpniv~~~~-~~~~--~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
T 3vhe_A 74 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK 150 (359)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS--TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------
T ss_pred HHHHHHHhhcCCcceeeeee-eeec--CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhh
Confidence 455567777 8899999888 5432 23446777777 58999999954322
Q ss_pred --------------------------------------CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCC
Q 005147 78 --------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN 119 (712)
Q Consensus 78 --------------------------------------~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~ 119 (712)
.+++.+++.|+.||+.||.|||++||+||||||+||+++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~ 230 (359)
T 3vhe_A 151 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 230 (359)
T ss_dssp ---------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred ccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 188999999999999999999999999999999999999999
Q ss_pred cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccc
Q 005147 120 HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVL 199 (712)
Q Consensus 120 ~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (712)
.+||+|||++.........
T Consensus 231 ~~kl~Dfg~a~~~~~~~~~------------------------------------------------------------- 249 (359)
T 3vhe_A 231 VVKICDFGLARDIYKDPDY------------------------------------------------------------- 249 (359)
T ss_dssp CEEECCCGGGSCTTSCTTC-------------------------------------------------------------
T ss_pred cEEEEeccceeeecccccc-------------------------------------------------------------
Confidence 9999999998543221000
Q ss_pred ccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhh
Q 005147 200 VEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEK 275 (712)
Q Consensus 200 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~ 275 (712)
.......||+.|+|||++.+..++.++|||||||++|||++ ||......
T Consensus 250 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 302 (359)
T 3vhe_A 250 ---------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 302 (359)
T ss_dssp ---------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ---------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh
Confidence 00011457899999999998889999999999999999996 56544333
Q ss_pred HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 276 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
......+.....+.......+...+++.+||..||.+|||+.++++|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 33444444433333333344566699999999999999999999885
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=279.24 Aligned_cols=202 Identities=16% Similarity=0.165 Sum_probs=153.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .|++|.++|.... ..+++.+++.|+.
T Consensus 135 ~E~~~l~~l~~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 210 (370)
T 2psq_A 135 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210 (370)
T ss_dssp HHHHHHHHSCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEcc---CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHH
Confidence 445567777 8999999888 5532 3456777777 5889999994322 3478999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 211 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------------------------------- 259 (370)
T 2psq_A 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------- 259 (370)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-------------------------------
T ss_pred HHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccce-------------------------------
Confidence 9999999999999999999999999999999999999998543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 260 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 282 (370)
T 2psq_A 260 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRVY 282 (370)
T ss_dssp ---------------------------------------------------------CTTTTTTSCGGGCCHHHHHTCCC
T ss_pred ---------------------------------------------------------ecccCCCcccceECHhHhcCCCC
Confidence 00001356889999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|||++ ||.... ....+..+.....+.......+...+++.+||..+|.+|||+.|+++
T Consensus 283 ~~~~DvwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 283 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999997 554332 22333444444333333334455669999999999999999999987
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-30 Score=271.74 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++.. ..+++.++..++.||+.||.|||++||+|
T Consensus 69 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 142 (303)
T 3a7i_A 69 QEITVLSQCDSPYVTKYYG-SYLK---DTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIH 142 (303)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeEEEE-EEec---CCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4555788899999999888 4432 3456777777 58899999954 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 143 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 174 (303)
T 3a7i_A 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQI------------------------------------------------ 174 (303)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECBTTBC------------------------------------------------
T ss_pred CCCChheEEECCCCCEEEeecccceecCcccc------------------------------------------------
Confidence 99999999999999999999998843321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 175 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 212 (303)
T 3a7i_A 175 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212 (303)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+.......+...+|+.+||..||.+|||+.++++||||.....
T Consensus 213 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 213 ARGEPPHSELHPM-KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHSSCTTTTSCHH-HHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred ccCCCCCCCcCHH-HHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 99 55443322 222223233222222223344569999999999999999999999999975543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-30 Score=268.58 Aligned_cols=207 Identities=15% Similarity=0.084 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.+. ....+++++++.+++|.+++......+++.++..|+.||+.||.|||++||+||
T Consensus 71 ~E~~~l~~l~h~~iv~~~~-~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~ 148 (298)
T 3pls_A 71 REGLLMRGLNHPNVLALIG-IMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148 (298)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EECCS-SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCeeeEEE-EEecC-CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4556788899999999988 54322 222344445557999999997766779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++..........
T Consensus 149 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------------------- 181 (298)
T 3pls_A 149 DLAARNCMLDESFTVKVADFGLARDILDREYYS----------------------------------------------- 181 (298)
T ss_dssp CCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------------------------------------------
T ss_pred CCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------------------------------------------
Confidence 999999999999999999999985432210000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........+++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 182 ---------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 222 (298)
T 3pls_A 182 ---------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222 (298)
T ss_dssp ---------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHh
Confidence 00001145788999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |++...........+.....++......+...+++.+||..||.+|||+.++++
T Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 223 TRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 8 444443333444444444333333333445669999999999999999999987
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=276.38 Aligned_cols=207 Identities=15% Similarity=0.141 Sum_probs=156.3
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..+ +||||+.+++ ++.. ...+++++|+.|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 53 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiH 128 (330)
T 2izr_A 53 LEYRFYKQLGSGDGIPQVYY-FGPC---GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128 (330)
T ss_dssp HHHHHHHHHCSCTTSCCEEE-EEEE---TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHhhCCCCCCEEEE-EEec---CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 344567777 9999999887 4432 3567888898899999999655556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 106 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 106 rDLkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||||+||+++.++. +||+|||+++..........
T Consensus 129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~---------------------------------------- 168 (330)
T 2izr_A 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH---------------------------------------- 168 (330)
T ss_dssp CCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB----------------------------------------
T ss_pred cCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc----------------------------------------
Confidence 999999999998887 99999999864322210000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.+. ......||+.|+|||++.+..++.++||||||
T Consensus 169 --------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 204 (330)
T 2izr_A 169 --------------------------------------------IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALG 204 (330)
T ss_dssp --------------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCcCCCccccChHHHcCCCCCchhHHHHHH
Confidence 000 00125789999999999999999999999999
Q ss_pred HHHHHhhC---CCCCCh--hhHHHHHhhcc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGE--EKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .....+..+.. ...+..+....|...+++..||..+|.+||++.+|++
T Consensus 205 ~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 205 HMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 99999998 665422 22222222221 1222233344666779999999999999999999875
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-30 Score=276.71 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=148.8
Q ss_pred cceeeccCCCCC------cccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~n------i~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..++..+.|+| ++.+++ ++ .....+++++|+.+++|.+++.. ....+++.+++.|+.||+.||+|||+
T Consensus 66 E~~~l~~l~~~~~~~~~~~~~~~~-~~---~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~ 141 (355)
T 2eu9_A 66 EINVLKKIKEKDKENKFLCVLMSD-WF---NFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141 (355)
T ss_dssp HHHHHHHHHHHCTTSCSCBCCEEE-EE---EETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhcCCCCceeEEEeee-ee---eeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344566666665 555444 33 23357899999988899888843 33459999999999999999999999
Q ss_pred cCceeccCCCCceee-------------------cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 101 QGIVVHNVRPSCFVM-------------------SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 101 ~gIvHrDLkP~NIll-------------------~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
+||+||||||+|||+ +..+.+||+|||++...+..
T Consensus 142 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------- 195 (355)
T 2eu9_A 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------------------------- 195 (355)
T ss_dssp TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--------------------------
T ss_pred CCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc--------------------------
Confidence 999999999999999 45667788777776321110
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.....||+.|+||
T Consensus 196 -------------------------------------------------------------------~~~~~gt~~y~aP 208 (355)
T 2eu9_A 196 -------------------------------------------------------------------HTTIVATRHYRPP 208 (355)
T ss_dssp -------------------------------------------------------------------CCSSCSCGGGCCH
T ss_pred -------------------------------------------------------------------ccCCcCCCcccCC
Confidence 0114689999999
Q ss_pred ccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhhh-----------------------
Q 005147 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL----------------------- 293 (712)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~~----------------------- 293 (712)
|++.+..++.++|||||||++|||++ ||........ .+..+. ...|..+..
T Consensus 209 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 2eu9_A 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 287 (355)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHH
T ss_pred eeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhc
Confidence 99999999999999999999999999 6655433221 111111 111211100
Q ss_pred ------------------cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 ------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 ------------------~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp HHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred cccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 012345899999999999999999999999999764
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=268.27 Aligned_cols=206 Identities=18% Similarity=0.262 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+.||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+|
T Consensus 60 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (276)
T 2h6d_A 60 REIQNLKLFRHPHIIKLYQ-VIST---PTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVH 134 (276)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHhcCCCCCEeEEEE-EEec---CCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4455688899999999888 4432 3457777777 4889999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 135 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 166 (276)
T 2h6d_A 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF------------------------------------------------ 166 (276)
T ss_dssp CCCCGGGEEECTTSCEEECCCCGGGCCCC---------------------------------------------------
T ss_pred CCCChhhEEECCCCCEEEeecccccccCCCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||.+.+..+ +.++|||||||++|+
T Consensus 167 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~ 203 (276)
T 2h6d_A 167 -------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203 (276)
T ss_dssp -----------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHH
Confidence 001357999999999988775 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||..... ......+.....+. .....+...+++.+||+.||.+|||+.++++||||+....
T Consensus 204 l~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 204 LLCGTLPFDDEHV-PTLFKKIRGGVFYI-PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred HHhCCCCCCCCcH-HHHHHHhhcCcccC-chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 998 6654332 23333333332211 1122345569999999999999999999999999987643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=275.93 Aligned_cols=207 Identities=20% Similarity=0.231 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.|+.||+.||.|||++||+|
T Consensus 90 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 164 (335)
T 2owb_A 90 MEISIHRSLAHQHVVGFHG-FFED---NDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIH 164 (335)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec---CCeEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence 3555788899999999888 5532 3457777777 579999988543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 165 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 196 (335)
T 2owb_A 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE------------------------------------------------ 196 (335)
T ss_dssp SCCCGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred cCCCchhEEEcCCCCEEEeeccCceecccCcc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|+|
T Consensus 197 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l 234 (335)
T 2owb_A 197 ------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234 (335)
T ss_dssp ------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||....... ....+...... ......+...+||.+||+.||.+|||+.++|+||||.....
T Consensus 235 ~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 235 LVGKPPFETSCLKE-TYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp HHSSCTTCCSSHHH-HHHHHHHTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHCcCCCCCCCHHH-HHHHHhcCCCC-CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence 99 665443322 22222222211 11122345569999999999999999999999999987543
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-30 Score=269.63 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=160.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+++++ ++.+ .....+++++|+. |++|.+++.. ....+++.+++.|+.||+.||.|||++|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (279)
T 2w5a_A 54 SEVNLLRELKHPNIVRYYD-RIID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131 (279)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE-GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCCeEEE-EEec-CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 4555688899999999887 3322 2334577777775 7899999943 2334899999999999999999999999
Q ss_pred -----ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 103 -----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 103 -----IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|+||||||+||+++.++.+|++|||.+........
T Consensus 132 ~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------- 171 (279)
T 2w5a_A 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---------------------------------------- 171 (279)
T ss_dssp ------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH----------------------------------------
T ss_pred CCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccc----------------------------------------
Confidence 99999999999999999999999998743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
......|++.|+|||.+.+..++.++||||
T Consensus 172 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 201 (279)
T 2w5a_A 172 --------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201 (279)
T ss_dssp --------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHHHH
T ss_pred --------------------------------------------------cccccCCCccccChHHhccCCCCchhhHHH
Confidence 001146799999999999988999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++|+|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++|+|+|+.....
T Consensus 202 lG~il~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 202 LGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHCCCCCcccCH-HHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 9999999998 6654433 2333444444433332233455669999999999999999999999999987654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=269.07 Aligned_cols=207 Identities=21% Similarity=0.233 Sum_probs=158.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 64 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H 138 (294)
T 2rku_A 64 MEISIHRSLAHQHVVGFHG-FFED---NDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIH 138 (294)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeeee-eecc---CCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3555788899999999888 5532 3456777777 5799999885433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 139 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 170 (294)
T 2rku_A 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE------------------------------------------------ 170 (294)
T ss_dssp CCCCGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred cCCChHhEEEcCCCCEEEEeccCceecccCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 208 (294)
T 2rku_A 171 ------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208 (294)
T ss_dssp ------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+ ......+...+++.+||+.||.+|||+.++++||||.....
T Consensus 209 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 209 LVGKPPFETSCLK-ETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHTTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HhCCCCCCCCCHH-HHHHHHhhccCC-CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 99 66544333 222223222211 11122345569999999999999999999999999986543
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=273.67 Aligned_cols=212 Identities=18% Similarity=0.265 Sum_probs=152.9
Q ss_pred ccceeeccCC--CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~--H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+. ||||+++++ ++. ....+++++|+.+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 75 ~E~~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 149 (313)
T 3cek_A 75 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 149 (313)
T ss_dssp HHHHHHHHHGGGCTTBCCEEE-EEE---CSSEEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccccCCceEEEEE-Eee---cCCEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 3444566665 599999887 442 234688899999999999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++ ++.+||+|||++.........
T Consensus 150 H~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 182 (313)
T 3cek_A 150 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 182 (313)
T ss_dssp CCCCCGGGEEEE-TTEEEECCCSSSCC-----------------------------------------------------
T ss_pred ecCCCcccEEEE-CCeEEEeeccccccccCcccc----------------------------------------------
Confidence 999999999996 589999999988543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
.......|++.|+|||.+.+ ..++.++
T Consensus 183 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 220 (313)
T 3cek_A 183 ------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220 (313)
T ss_dssp -------------------------------------------------CCGGGCCHHHHTTCC----------CCCHHH
T ss_pred ------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchH
Confidence 00011468999999999875 4688999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|+|++ ||.........+...........+... .+...+++.+||..||.+|||+.++|+||||+...
T Consensus 221 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 99999999999998 665443333333333322222222222 34456999999999999999999999999999765
Q ss_pred Cch
Q 005147 330 DSM 332 (712)
Q Consensus 330 ~~~ 332 (712)
.+.
T Consensus 301 ~~~ 303 (313)
T 3cek_A 301 HPV 303 (313)
T ss_dssp ---
T ss_pred Cch
Confidence 543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=279.05 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=152.4
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
..+..++||||+++++.+.........+++++|+.|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|||||
T Consensus 100 ~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk 178 (345)
T 2v62_A 100 IERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK 178 (345)
T ss_dssp HHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred HhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcC
Confidence 44677899999999883333223345788888888999999996544 59999999999999999999999999999999
Q ss_pred CCceeecCCC--cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 110 PSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 110 P~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+||+++.++ .+||+|||+++......... .+
T Consensus 179 p~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~------------------------------~~---------------- 212 (345)
T 2v62_A 179 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHK------------------------------QY---------------- 212 (345)
T ss_dssp GGGEEEESSSTTSEEECCCTTCEESSGGGCCC------------------------------CC----------------
T ss_pred HHHEEEccCCCCcEEEEeCCCceecccccccc------------------------------cc----------------
Confidence 9999999777 99999999985432110000 00
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 213 -------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 213 -------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp -------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 0000112578999999999999999999999999999999999
Q ss_pred ---CCCCChhhHH---HHHhhcccCCCchhh------hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ---PFSTGEEKTR---TMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ---pf~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||........ ..........+.... ...+...+++.+||..||.+|||+.+|++
T Consensus 256 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 256 GKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp SSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 5533211111 111111122333222 22335569999999999999999999877
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-30 Score=270.87 Aligned_cols=200 Identities=17% Similarity=0.157 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhhcC-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQG- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs~g- 102 (712)
++..+|+.++||||+++++ ++.. ...+++++|+ .|++|.+++..... .+++.+++.++.||+.||+|||++|
T Consensus 83 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~ 158 (309)
T 3p86_A 83 REVAIMKRLRHPNIVLFMG-AVTQ---PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158 (309)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4566788899999999888 4432 2346777776 58899999965432 3899999999999999999999999
Q ss_pred -ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 -IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 -IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|+||||||+||+++.++.+||+|||+++.......
T Consensus 159 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------------- 194 (309)
T 3p86_A 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL-------------------------------------------- 194 (309)
T ss_dssp CCCCTTCCGGGEEECTTCCEEECCCC------------------------------------------------------
T ss_pred CEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--------------------------------------------
Confidence 99999999999999999999999998843211100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 195 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 228 (309)
T 3p86_A 195 ----------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228 (309)
T ss_dssp -----------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHHHH
Confidence 0011468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|+|++ ||....... ....+. ............+...+||.+||..||.+|||+.++++
T Consensus 229 l~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 229 LWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999 665544332 222222 22222222233455669999999999999999999987
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-30 Score=277.07 Aligned_cols=202 Identities=15% Similarity=0.110 Sum_probs=154.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++++.+++|.+++......+++..++.|+.||+.||.|||++||+||
T Consensus 66 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~ 141 (327)
T 3poz_A 66 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141 (327)
T ss_dssp HHHHHHHHCCBTTBCCEEE-EEES---SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCEeEEEE-EEec---CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence 4556788899999999988 5533 23456666668999999996655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..+.....
T Consensus 142 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------------ 173 (327)
T 3poz_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE------------------------------------------------ 173 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------------------------------------------------
T ss_pred CCChheEEECCCCCEEEccCcceeEccCCccc------------------------------------------------
Confidence 99999999999999999999998543221000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 174 ----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3poz_A 174 ----------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp ----------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHH
Confidence 0001135688999999999999999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+||+.+|.+|||+.++++
T Consensus 214 t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 214 TFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred hcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 7 55433322 233333333333333344556679999999999999999999987
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-30 Score=268.55 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=156.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+ +||||+++++ ++. ....+++++|+ .+++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 72 ~e~~~l~~l~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 146 (298)
T 1phk_A 72 KEVDILRKVSGHPNIIQLKD-TYE---TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIV 146 (298)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEE---CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeeeee-eec---cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344456666 5999999888 543 23457777777 578999999543 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++|+|||.+.......
T Consensus 147 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 178 (298)
T 1phk_A 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGE------------------------------------------------ 178 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCcceEEEcCCCcEEEecccchhhcCCCc------------------------------------------------
Confidence 99999999999999999999999874321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc------CCCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSl 258 (712)
......|++.|+|||++. ...++.++|||||
T Consensus 179 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 215 (298)
T 1phk_A 179 -------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215 (298)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHhH
Confidence 000146799999999985 4558999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccC--CC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|+|++ ||...... .....+.... .+ +......+...+|+.+||..||.+|||+.++|+||||+....
T Consensus 216 G~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 216 GVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred HHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence 999999998 66544332 2222222222 12 222233445569999999999999999999999999997643
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-30 Score=272.66 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 99 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 174 (325)
T 3kul_A 99 SEASIMGQFDHPNIIRLEG-VVT---RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVH 174 (325)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEC---GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEE---eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 4566788999999999888 553 23456777777 488999999766566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... .
T Consensus 175 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~--------------- 208 (325)
T 3kul_A 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------A--------------- 208 (325)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------C---------------
T ss_pred CCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------e---------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+|+.|+|||++.+..++.++|||||||++|||
T Consensus 209 -----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 247 (325)
T 3kul_A 209 -----------------------------------------YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247 (325)
T ss_dssp -----------------------------------------EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 248 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 248 LAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 97 55444333 334444444333333334455669999999999999999999987
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-30 Score=265.63 Aligned_cols=202 Identities=14% Similarity=0.174 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 54 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (269)
T 4hcu_A 54 EEAEVMMKLSHPKLVQLYG-VCLE---QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129 (269)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec---CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 5532 3457777777 588999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 130 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 162 (269)
T 4hcu_A 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------------------------------- 162 (269)
T ss_dssp SCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCcchheEEEcCCCCEEeccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 200 (269)
T 4hcu_A 163 ------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200 (269)
T ss_dssp ------------------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence 00013467889999999988899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++|
T Consensus 201 l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 201 FSEGKIPYENRSN-SEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HTTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCCCCCCCCCH-HHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 97 5544333 33444444443333223334556699999999999999999999884
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-30 Score=274.61 Aligned_cols=202 Identities=15% Similarity=0.104 Sum_probs=152.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++++.+++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 66 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 141 (327)
T 3lzb_A 66 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141 (327)
T ss_dssp HHHHHHTTCCBTTBCCCCE-EEES---SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCeeEEEE-EEec---CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCC
Confidence 4556788999999999988 5533 23456666668999999996655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+..... .
T Consensus 142 Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~--------------- 174 (327)
T 3lzb_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y--------------- 174 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTC----------------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c---------------
Confidence 99999999999999999999998543222000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......+++.|+|||.+.+..++.++|||||||++|||+
T Consensus 175 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3lzb_A 175 -----------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp ----------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHH
Confidence 000134688999999999999999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 214 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 214 TFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 7 55443322 233333333333333344556679999999999999999999987
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-30 Score=267.93 Aligned_cols=205 Identities=16% Similarity=0.143 Sum_probs=152.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.+++......+++.++..|+.||+.||.|||++||+|
T Consensus 75 ~E~~~l~~l~h~~iv~~~~-~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H 151 (298)
T 3f66_A 75 TEGIIMKDFSHPNVLSLLG-ICLR--SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151 (298)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EECC--SSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeeee-EEEc--CCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999988 4322 22345666666 588999999776667899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++..........
T Consensus 152 ~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~---------------------------------------------- 185 (298)
T 3f66_A 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS---------------------------------------------- 185 (298)
T ss_dssp SCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB----------------------------------------------
T ss_pred CCCchheEEECCCCCEEECcccccccccccchhc----------------------------------------------
Confidence 9999999999999999999999985432210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 225 (298)
T 3f66_A 186 ----------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225 (298)
T ss_dssp ----------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHH
Confidence 0000114578899999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 226 MTRGAPPYPDVNT-FDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HTTSCCSSTTSCT-TTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 98 3333222 2223333332222222223344569999999999999999999987
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=261.39 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=152.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
++..++..++||||+++++ ++.+.. ...+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||.|||++|
T Consensus 56 ~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~ 133 (271)
T 3kmu_A 56 EECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPL 133 (271)
T ss_dssp HHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5566788999999999988 553332 3456666666 5889999995543 35899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++++||++......
T Consensus 134 i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~------------------------------------------------ 165 (271)
T 3kmu_A 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQS------------------------------------------------ 165 (271)
T ss_dssp CTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC------------------------------------------------
T ss_pred eecCCCccceEEEcCCcceeEEeccceeeecc------------------------------------------------
Confidence 99999999999999999999988876521100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC---ccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~sDIwSlG 259 (712)
....||+.|+|||.+.+..++. ++||||||
T Consensus 166 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG 198 (271)
T 3kmu_A 166 -----------------------------------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198 (271)
T ss_dssp -----------------------------------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred -----------------------------------------------cCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence 0135799999999998766544 79999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||..................+.......+...+++.+||+.||.+|||+.++++
T Consensus 199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999998 666555444333333333333333334455669999999999999999999986
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-30 Score=278.39 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=147.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.++++.....+++.+++.++.||+.||.|||++||+|
T Consensus 139 ~E~~il~~l~hpnIv~~~~-~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 215 (373)
T 3c1x_A 139 TEGIIMKDFSHPNVLSLLG-ICLR--SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215 (373)
T ss_dssp HHHTTSTTCCCTTBCCCCE-EECC--CSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcceEEE-EEEc--CCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 4556788999999999988 4322 22345666666 688999999776667899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++.........
T Consensus 216 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~---------------------------------------------- 249 (373)
T 3c1x_A 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS---------------------------------------------- 249 (373)
T ss_dssp SCCCGGGEEECTTCCEEECCC-----------------------------------------------------------
T ss_pred CccchheEEECCCCCEEEeecccccccccccccc----------------------------------------------
Confidence 9999999999999999999999985432210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........+++.|+|||.+.+..++.++|||||||++|||
T Consensus 250 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 289 (373)
T 3c1x_A 250 ----------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 289 (373)
T ss_dssp ------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 0000113568899999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 290 lt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 290 MTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 98 44433222 222233333222222223345569999999999999999999987
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=285.75 Aligned_cols=210 Identities=16% Similarity=0.221 Sum_probs=144.7
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCC------CChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~------l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+|.. .+||||+++++ ++ .....+++++|+++++|.+++...... .++.+++.|+.||+.||+|||
T Consensus 57 ~E~~~l~~l~~HpnIv~~~~-~~---~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 132 (434)
T 2rio_A 57 MEIKLLTESDDHPNVIRYYC-SE---TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132 (434)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EE---ECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCcCeEEE-EE---ecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 34445655 48999999877 44 234568899999888999999554321 244567889999999999999
Q ss_pred hcCceeccCCCCceeecCC-------------CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhc
Q 005147 100 SQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 166 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~-------------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (712)
++||+||||||+|||++.. +.+||+|||+++........
T Consensus 133 ~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~---------------------------- 184 (434)
T 2rio_A 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS---------------------------- 184 (434)
T ss_dssp HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------------------
T ss_pred HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcc----------------------------
Confidence 9999999999999999754 37999999988543221000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC
Q 005147 167 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 246 (712)
Q Consensus 167 ~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 246 (712)
+ ........||+.|+|||++.+
T Consensus 185 ----~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 185 ----F------------------------------------------------------RTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp --------------------------------------------------------------------CCTTSCHHHHSC
T ss_pred ----c------------------------------------------------------eeeecCCCCCCCccCHHHhcc
Confidence 0 000011468999999999976
Q ss_pred -------CCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchh-----hhcCchhHHHHHHcCCCCC
Q 005147 247 -------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 247 -------~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP 310 (712)
..++.++|||||||++|||++ ||........ ..+......+.. ....+...+||.+||+.||
T Consensus 207 ~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 284 (434)
T 2rio_A 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284 (434)
T ss_dssp CCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSG
T ss_pred ccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCcccccccccccchHHHHHHHHHHhhCCh
Confidence 568999999999999999997 5543322211 111111111111 1112445699999999999
Q ss_pred CCCCCHHHHhcCcCCCCC
Q 005147 311 SGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~ 328 (712)
.+|||+.++++||||...
T Consensus 285 ~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 285 LKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGSCCHHHHHTSGGGSCH
T ss_pred hhCCCHHHHHhCCccCCc
Confidence 999999999999999753
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-31 Score=275.93 Aligned_cols=212 Identities=14% Similarity=0.139 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.++..|+.||+.||+|||++||+|
T Consensus 56 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 131 (310)
T 3s95_A 56 KEVKVMRCLEHPNVLKFIG-VLYK---DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131 (310)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCcccEEE-EEec---CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999888 4432 3456777777 588999999765566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........... .. ..
T Consensus 132 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-----------------------------~~--~~---------- 170 (310)
T 3s95_A 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-----------------------------GL--RS---------- 170 (310)
T ss_dssp SCCSTTSEEECTTSCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCCcCeEEECCCCCEEEeecccceeccccccccc-----------------------------cc--cc----------
Confidence 99999999999999999999999865432210000 00 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.............||+.|+|||.+.+..++.++|||||||++|||
T Consensus 171 -----------------------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el 215 (310)
T 3s95_A 171 -----------------------------------LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215 (310)
T ss_dssp --------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------ccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000000001125789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHH----HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEKTR----TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||........ ..........+ ....+...+++.+||..||.+|||+.++++
T Consensus 216 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 216 IGRVNADPDYLPRTMDFGLNVRGFLDRYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHTCCSSTTTSCBCTTSSBCHHHHHHHTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcCCCCCcchhhhHHHHhhhhhccccccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 98 3332111000 00000111111 122345568999999999999999999987
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=271.62 Aligned_cols=206 Identities=18% Similarity=0.141 Sum_probs=151.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. .....+++++|+ .+++|.+++......+++.++..++.||+.||+|||++||+|
T Consensus 60 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (295)
T 3ugc_A 60 REIEILKSLQHDNIVKYKG-VCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137 (295)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECH-HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec-CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5666789999999999888 4322 233456777777 489999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... +
T Consensus 138 ~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 171 (295)
T 3ugc_A 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F-------------- 171 (295)
T ss_dssp SCCSGGGEEEEETTEEEECCCCSCC-------------------------------------------------------
T ss_pred CCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e--------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|||
T Consensus 172 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 210 (295)
T 3ugc_A 172 -----------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210 (295)
T ss_dssp ---------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHH
Confidence 000013467889999999999999999999999999999
Q ss_pred hC---CCCCChhh---------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ |+...... ......+.....++......+...+++.+||..||.+|||+.++++
T Consensus 211 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99 33221111 0111222222222222233445669999999999999999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-30 Score=268.27 Aligned_cols=200 Identities=19% Similarity=0.172 Sum_probs=146.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~iv~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (281)
T 1mp8_A 65 QEALTMRQFDHPHIVKLIG-VIT----ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139 (281)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC----SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCccceEEE-EEc----cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999887 442 2345667776 588999999655556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 140 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 172 (281)
T 1mp8_A 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----------------------------------------------- 172 (281)
T ss_dssp SCCSGGGEEEEETTEEEECC------------------------------------------------------------
T ss_pred ccccHHHEEECCCCCEEECccccccccCccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 210 (281)
T 1mp8_A 173 ------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210 (281)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 211 l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 211 LMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 85 56543332 233333333333333334455669999999999999999999886
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=271.23 Aligned_cols=206 Identities=17% Similarity=0.135 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++... ....+++++|+ .+++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 72 ~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 149 (302)
T 4e5w_A 72 KEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 149 (302)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeeeee-EEecC-CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 4566788899999999888 44332 23456777777 588999999555556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... +
T Consensus 150 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 183 (302)
T 4e5w_A 150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y-------------- 183 (302)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e--------------
Confidence 999999999999999999999988543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......||..|+|||.+.+..++.++|||||||++|+|
T Consensus 184 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (302)
T 4e5w_A 184 -----------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222 (302)
T ss_dssp -----------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHH
Confidence 000114578899999999888899999999999999999
Q ss_pred hCCCCCC-----------------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++..+. .........+......+......+...+|+.+||..||.+|||+.++++
T Consensus 223 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9933221 1222222333333333322333455669999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=268.29 Aligned_cols=205 Identities=22% Similarity=0.306 Sum_probs=158.2
Q ss_pred ccceeeccCCCCCcccccccccccc-------------cccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-------------~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi 91 (712)
++..++..+.||||+++++ ++... .....+++++|+ .+++|.+++.. ....+++..++.++.||
T Consensus 53 ~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi 131 (284)
T 2a19_B 53 REVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 4555788899999999887 44321 123357788887 57799999943 33458999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 132 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 176 (284)
T 2a19_B 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------------------------- 176 (284)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS-----------------------------------
T ss_pred HHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc-----------------------------------
Confidence 999999999999999999999999999999999999874432110
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
......|++.|+|||.+.+..++.
T Consensus 177 --------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 200 (284)
T 2a19_B 177 --------------------------------------------------------KRTRSKGTLRYMSPEQISSQDYGK 200 (284)
T ss_dssp --------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCCCT
T ss_pred --------------------------------------------------------cccccCCcccccChhhhccCCCcc
Confidence 000135799999999999989999
Q ss_pred ccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 252 ASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++|||||||++|+|+++..+..........+.....+.. ..+...+++.+||..||.+|||+.+++++.+.-
T Consensus 201 ~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 201 EVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999955544444444444444443322 223455899999999999999999999987544
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-30 Score=271.09 Aligned_cols=203 Identities=16% Similarity=0.182 Sum_probs=150.6
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLk 109 (712)
++..++||||+++++ ++.. ...+++++|+.+..+..++......+++..+..++.||+.||.|||++ ||+|||||
T Consensus 77 ~~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlk 152 (318)
T 2dyl_A 77 VLKSHDCPYIVQCFG-TFIT---NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152 (318)
T ss_dssp HHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred HHHhcCCCceeeEEE-EEec---CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCC
Confidence 577789999999888 4432 346889999988777776644345599999999999999999999996 99999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+||+|||++.......
T Consensus 153 p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 179 (318)
T 2dyl_A 153 PSNILLDERGQIKLCDFGISGRLVDDK----------------------------------------------------- 179 (318)
T ss_dssp GGGEEECTTSCEEECCCTTC------------------------------------------------------------
T ss_pred HHHEEECCCCCEEEEECCCchhccCCc-----------------------------------------------------
Confidence 999999999999999999874321110
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHHHHH
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++. +..++.++|||||||++|+
T Consensus 180 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~ 221 (318)
T 2dyl_A 180 --------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221 (318)
T ss_dssp ---------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHH
T ss_pred --------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHH
Confidence 000135799999999994 4558999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||.........+..+.....+.. .....+...+|+.+||..||.+|||+.++++||||+..
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 998 66553333344444433322211 11234556699999999999999999999999999743
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-30 Score=269.92 Aligned_cols=214 Identities=12% Similarity=0.068 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~ 97 (712)
++..+++.++||||+++++ ++...... ...++++++ .+++|.+++.. ....+++.+++.|+.||+.||.|
T Consensus 74 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~ 152 (323)
T 3qup_A 74 REAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY 152 (323)
T ss_dssp HHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHH
Confidence 4556788899999999998 44332222 123566665 68899999832 12248999999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||+||+++.++.+||+|||++.........
T Consensus 153 LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------------- 193 (323)
T 3qup_A 153 LSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY--------------------------------------- 193 (323)
T ss_dssp HHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------------------------------------------
T ss_pred HHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc---------------------------------------
Confidence 99999999999999999999999999999988543221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......+++.|+|||.+.+..++.++||||
T Consensus 194 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 224 (323)
T 3qup_A 194 -------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSDVWA 224 (323)
T ss_dssp --------------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred -------------------------------------------------cccccccCcccccCchhhcCCCCCCccchhh
Confidence 0000134678899999999989999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-------HHHHhcCcCCC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSEFLN 326 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-------~~eiL~hp~~~ 326 (712)
|||++|||++ ||...... .....+.....+.......+...+|+.+||..||.+||| ++++++|+|+.
T Consensus 225 lG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 225 FGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp HHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 9999999988 45433332 333333333333333344456669999999999999999 77788899988
Q ss_pred CCcC
Q 005147 327 EPRD 330 (712)
Q Consensus 327 ~~~~ 330 (712)
....
T Consensus 304 ~~~~ 307 (323)
T 3qup_A 304 STSQ 307 (323)
T ss_dssp ----
T ss_pred CCCC
Confidence 7533
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=268.26 Aligned_cols=205 Identities=17% Similarity=0.269 Sum_probs=152.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 60 ~e~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (294)
T 4eqm_A 60 REVHNSSQLSHQNIVSMID-VDE---EDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVH 134 (294)
T ss_dssp HHHHHHTTCCBTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCCceEEE-eee---eCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5566788899999999888 442 33467777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++.........
T Consensus 135 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 167 (294)
T 4eqm_A 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLT----------------------------------------------- 167 (294)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSSTTC-----------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEEeCCCcccccccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 205 (294)
T 4eqm_A 168 ------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205 (294)
T ss_dssp -------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............+.....+. ...... +...+++.+||..||.+||+..+.+.++|.
T Consensus 206 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred HhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 98 7766555444444444333221 112223 344599999999999999955555555543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=267.15 Aligned_cols=206 Identities=14% Similarity=0.070 Sum_probs=151.1
Q ss_pred ceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..+ .|+|++.+++ ++ .....+++++|+.|++|.+++...+..+++.+++.|+.||+.||.|||++||+|||
T Consensus 56 ~~~~~~l~~~~~i~~~~~-~~---~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D 131 (298)
T 1csn_A 56 YRTYKLLAGCTGIPNVYY-FG---QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD 131 (298)
T ss_dssp HHHHHHTTTCTTCCCEEE-EE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHHHHHhcCCCCCeEEe-ec---CCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 3355555 7899988777 44 23456788899889999999966555699999999999999999999999999999
Q ss_pred CCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 108 VRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 108 LkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||+||+++.++. ++|+|||++........... .
T Consensus 132 lkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~----------- 170 (298)
T 1csn_A 132 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I----------- 170 (298)
T ss_dssp CCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C-----------
T ss_pred CCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c-----------
Confidence 9999999987765 99999999854422210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.........||+.|+|||.+.+..++.++|||||||++
T Consensus 171 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 208 (298)
T 1csn_A 171 ------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 208 (298)
T ss_dssp ------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHH
Confidence 00000125689999999999999999999999999999
Q ss_pred HHhhC---CCCCCh--hhHHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGE--EKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~--~~~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||.... ........+.. ....+..... .+...+++.+||..||.+|||+.+|++
T Consensus 209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 209 MYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 99999 665421 11122222211 1111222223 345559999999999999999999876
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-30 Score=272.52 Aligned_cols=206 Identities=14% Similarity=0.082 Sum_probs=150.2
Q ss_pred eeccceeeccCCCCCccccccccccccc-ccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
.+++..+|..++||||+++++ ++.... ....+++++|+. +++|.++++.. .+++.+++.|+.||+.||.|||++
T Consensus 65 ~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 141 (322)
T 3soc_A 65 NEYEVYSLPGMKHENILQFIG-AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDI 141 (322)
T ss_dssp HHHHHHTSTTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhcCCCCCchhhcc-eeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 345666788999999999998 443332 244578888885 88999999553 389999999999999999999999
Q ss_pred ---------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccc
Q 005147 102 ---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (712)
Q Consensus 102 ---------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg 172 (712)
||+||||||+||+++.++.+||+|||+++........
T Consensus 142 ~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~---------------------------------- 187 (322)
T 3soc_A 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA---------------------------------- 187 (322)
T ss_dssp EEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC----------------------------------
T ss_pred cccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc----------------------------------
Confidence 9999999999999999999999999998543211000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----
Q 005147 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----- 247 (712)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----- 247 (712)
.......||+.|+|||++.+.
T Consensus 188 ------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 213 (322)
T 3soc_A 188 ------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAINFQR 213 (322)
T ss_dssp ------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCCCCH
T ss_pred ------------------------------------------------------cccccCccCccccCHhhcccccccCc
Confidence 000114689999999999873
Q ss_pred CCCCccchHHHHHHHHHhhC---CCCCCh---------------hhHHHHHhhcccCCCchhhhc------CchhHHHHH
Q 005147 248 PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLK------FPKEASFCL 303 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~---pf~~~~---------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~ 303 (712)
.++.++|||||||++|||++ ||.... ...............+.+... .+...+|+.
T Consensus 214 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (322)
T 3soc_A 214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIE 293 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHH
Confidence 36678999999999999999 554321 111111112222222211111 123559999
Q ss_pred HcCCCCCCCCCCHHHHhc
Q 005147 304 WLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~ 321 (712)
+||..||++|||+.++++
T Consensus 294 ~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 294 ECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHTCSSGGGSCCHHHHHH
T ss_pred HHccCChhhCcCHHHHHH
Confidence 999999999999999987
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-30 Score=271.47 Aligned_cols=203 Identities=15% Similarity=0.139 Sum_probs=138.4
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhc-Ccee
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvH 105 (712)
+++.++||||+++++ ++.. ...+++++|+.+++|.+++.. ....+++..+..++.||+.||.|||++ ||+|
T Consensus 74 ~~~~~~h~niv~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH 149 (327)
T 3aln_A 74 VMRSSDCPYIVQFYG-ALFR---EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149 (327)
T ss_dssp HHSSCCCTTBCCEEE-EEEC---SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHcCCCCcEeeeee-EEEe---CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence 677789999999888 4432 346789999988899988742 244589999999999999999999999 9999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 180 (327)
T 3aln_A 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSI------------------------------------------------- 180 (327)
T ss_dssp SCCCGGGEEEETTTEEEECCCSSSCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEccCCCceeccccc-------------------------------------------------
Confidence 9999999999999999999999884431110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc----cCCCCCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+ .+..++.++|||||||+
T Consensus 181 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 181 ------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp -------------------------------------------------------------------CCSHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 00013579999999998 45568999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCch---h-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---L-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||.........+..+.....+.. . ....+...+|+.+||..||.+|||+.++++||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 999998 66544333223322222222211 1 1233455699999999999999999999999999754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-30 Score=278.06 Aligned_cols=206 Identities=14% Similarity=0.139 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++... ...+++.+++.|+.||+.||+|||
T Consensus 123 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 198 (367)
T 3l9p_A 123 MEALIISKFNHQNIVRCIG-VSLQ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198 (367)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 4556788899999999888 5432 3345677777 589999999432 234899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 199 ~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~---------------------------------~~----- 240 (367)
T 3l9p_A 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG---------------------------------YY----- 240 (367)
T ss_dssp HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHS---------------------------------SC-----
T ss_pred hCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccc---------------------------------cc-----
Confidence 99999999999999999555 49999999884210000 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......||+.|+|||++.+..++.++|||
T Consensus 241 --------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 270 (367)
T 3l9p_A 241 --------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270 (367)
T ss_dssp --------------------------------------------------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccCCCcCCcccEECHHHhcCCCCCcHHHHH
Confidence 000114678999999999988999999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||++|||++ ||..... ......+.....+.......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 271 slG~il~ellt~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 271 SFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999996 5544333 33444444433333223334456699999999999999999999997643
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-30 Score=272.49 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=154.4
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC----------------------CCChh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~----------------------~l~~~ 82 (712)
++..+|..+ +||||+++++ ++.. ...+++++|+ .|++|.+++..... .+++.
T Consensus 97 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 172 (344)
T 1rjb_A 97 SELKMMTQLGSHENIVNLLG-ACTL---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172 (344)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHH
T ss_pred HHHHHHHhhcCCCCeeeEEE-EEee---CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHH
Confidence 445567777 9999999888 5532 3456777777 58899999955432 37899
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|+.||+.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 173 ~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------- 227 (344)
T 1rjb_A 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------------------------- 227 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999999854321100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
. .......|++.|+|||
T Consensus 228 --------~-------------------------------------------------------~~~~~~~~t~~y~aPE 244 (344)
T 1rjb_A 228 --------Y-------------------------------------------------------VVRGNARLPVKWMAPE 244 (344)
T ss_dssp --------S-------------------------------------------------------EEETTEEECGGGCCHH
T ss_pred --------c-------------------------------------------------------eeccCccCccCccCHH
Confidence 0 0001145688999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|+|++ ||............+.....++......+...+|+.+||..||.+|||+.+
T Consensus 245 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 324 (344)
T 1rjb_A 245 SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 324 (344)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 9988889999999999999999997 565443333333334443333333334455669999999999999999999
Q ss_pred HhcC
Q 005147 319 LLQS 322 (712)
Q Consensus 319 iL~h 322 (712)
++++
T Consensus 325 l~~~ 328 (344)
T 1rjb_A 325 LTSF 328 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9884
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=264.89 Aligned_cols=202 Identities=17% Similarity=0.249 Sum_probs=146.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+.+++ ++ ....+++++++ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 69 ~E~~~l~~l~h~~iv~~~~-~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H 143 (289)
T 3og7_A 69 NEVGVLRKTRHVNILLFMG-YS----TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143 (289)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EE----CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCcEEEEEe-ec----cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4556788999999999877 33 22345666665 689999999666667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 144 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 176 (289)
T 3og7_A 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS----------------------------------------------- 176 (289)
T ss_dssp SCCCGGGEEEETTTEEEECCCC----------------------------------------------------------
T ss_pred ccCccceEEECCCCCEEEccceecccccccccc-----------------------------------------------
Confidence 999999999999999999999988432211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
.......|++.|+|||.+. +..++.++|||||||++
T Consensus 177 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il 215 (289)
T 3og7_A 177 -----------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215 (289)
T ss_dssp ------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHH
Confidence 0001146899999999986 55689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh---h-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL---L-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||............+.....++.. . ...+...+|+.+||..+|.+|||+.++++
T Consensus 216 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 216 YELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99998 676544444444444443333322 2 22344569999999999999999999986
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-30 Score=263.43 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=154.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+ .|++|.+++......+++.++..|+.||+.||.|||++||+|
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 127 (268)
T 3sxs_A 52 QEAQTMMKLSHPKLVKFYG-VCS---KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127 (268)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---SSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHhCCCCCEeeEEE-EEc---cCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4555788899999999888 553 33457777777 589999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 128 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~----------------------------------------------- 160 (268)
T 3sxs_A 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----------------------------------------------- 160 (268)
T ss_dssp SSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-----------------------------------------------
T ss_pred CCcCcceEEECCCCCEEEccCccceecchhhhh-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 198 (268)
T 3sxs_A 161 ------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198 (268)
T ss_dssp ------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.+++++
T Consensus 199 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 199 FSLGKMPYDLYTNS-EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCccccChH-HHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 97 55544333 2333333332222222234456699999999999999999999984
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-30 Score=268.81 Aligned_cols=205 Identities=20% Similarity=0.216 Sum_probs=154.2
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC---------------CCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~---------------~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ....+++++|+ .|++|.+++..... .+++.+++.++.
T Consensus 79 ~E~~~l~~l~~hp~iv~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 2xir_A 79 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155 (316)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECC--TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHH
T ss_pred HHHHHHHhcccCCCeeeEEE-EEec--CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHH
Confidence 445566777 7899999888 4432 23446777776 58899999955432 278999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+|++|||++.........
T Consensus 156 qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------- 204 (316)
T 2xir_A 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------- 204 (316)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS-------------------------------
T ss_pred HHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccc-------------------------------
Confidence 9999999999999999999999999999999999999998543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......|++.|+|||++.+..+
T Consensus 205 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 227 (316)
T 2xir_A 205 ---------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 227 (316)
T ss_dssp ---------------------------------------------------------EEETTEEECGGGCCHHHHHHCCC
T ss_pred ---------------------------------------------------------eeccCCCcceeecCchhhccccc
Confidence 00011457889999999998889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|+|++ ||............+.....+.......+...+++.+||..||.+|||+.++++|
T Consensus 228 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999997 5554333333334443333333223344566699999999999999999999985
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-30 Score=264.46 Aligned_cols=202 Identities=16% Similarity=0.205 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 68 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 143 (283)
T 3gen_A 68 EEAKVMMNLSHEKLVQLYG-VCT---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143 (283)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC---SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeeEEE-EEe---cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 4556788899999999888 553 23457788887 589999999765556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 144 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 176 (283)
T 3gen_A 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----------------------------------------------- 176 (283)
T ss_dssp SSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCCccceEEEcCCCCEEEccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 177 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l 214 (283)
T 3gen_A 177 ------------------------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214 (283)
T ss_dssp ------------------------------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 00013467889999999988899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.++++|
T Consensus 215 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 215 YSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 97 55544332 3333444333322222334556699999999999999999999874
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-30 Score=265.61 Aligned_cols=195 Identities=16% Similarity=0.204 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..++.|+.||+.||.|||++||+|
T Consensus 61 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 136 (289)
T 4fvq_A 61 EAASMMSKLSHKHLVLNYG-VCVC---GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIH 136 (289)
T ss_dssp HHHHHHHTSCCTTBCCEEE-EECC---TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeEEEE-EEEe---CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeEC
Confidence 4556788899999999888 5532 3345677777 579999999666556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 106 HNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 106 rDLkP~NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|||||+||+++.++. ++++|||++......
T Consensus 137 ~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 174 (289)
T 4fvq_A 137 GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------ 174 (289)
T ss_dssp CCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------------------------------------------
T ss_pred CCcCcceEEEecCCcccccccceeeeccCcccccccCc------------------------------------------
Confidence 999999999998876 999999887322100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIw 256 (712)
....|++.|+|||.+.+ ..++.++|||
T Consensus 175 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 202 (289)
T 4fvq_A 175 ----------------------------------------------------DILQERIPWVPPECIENPKNLNLATDKW 202 (289)
T ss_dssp ----------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHHHH
T ss_pred ----------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhHHH
Confidence 01346889999999987 6699999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||++ |+............... ...+. ...+...+|+.+||+.||.+|||+.+++++
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 203 SFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA---PKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999998 33332222222222222 11221 224566799999999999999999999984
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=266.21 Aligned_cols=196 Identities=18% Similarity=0.253 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhh---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS--- 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs--- 100 (712)
++..+|+.++||||+++++ ++. +.+++++|+ .|++|.+++..... .++..+++.++.||+.||.|||+
T Consensus 50 ~E~~~l~~l~hp~iv~~~~-~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~ 123 (307)
T 2eva_A 50 VELRQLSRVNHPNIVKLYG-ACL-----NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123 (307)
T ss_dssp HHHHHHHHCCCTTBCCEEE-BCT-----TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHhcCCCCCcCeEEE-EEc-----CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4556788899999999887 443 236777777 58999999955432 36889999999999999999999
Q ss_pred cCceeccCCCCceeecCCCc-EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~-vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++.++. +|++|||++......
T Consensus 124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 159 (307)
T 2eva_A 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-------------------------------------------- 159 (307)
T ss_dssp SCCCCCCCSGGGEEEETTTTEEEECCCCC---------------------------------------------------
T ss_pred CCeecCCCChhHEEEeCCCCEEEEcccccccccccc--------------------------------------------
Confidence 89999999999999998876 799999987432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.....|++.|+|||.+.+..++.++||||||
T Consensus 160 -------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 190 (307)
T 2eva_A 160 -------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190 (307)
T ss_dssp ------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHH
T ss_pred -------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHH
Confidence 0013579999999999998999999999999
Q ss_pred HHHHHhhC---CCCCCh-hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .....+........++......+...+++.+||..||.+|||+.++++
T Consensus 191 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999 564322 222233333334344433334455669999999999999999999986
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=261.37 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g--- 102 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++.. ..+++.++..++.||+.||.|||++|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~ 128 (271)
T 3dtc_A 55 QEAKLFAMLKHPNIIALRG-VCLK---EPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVP 128 (271)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECC---C--CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 4556788899999999888 5532 2356777777 58999999853 34899999999999999999999999
Q ss_pred ceeccCCCCceeecC--------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 103 IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 103 IvHrDLkP~NIll~~--------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|+||||||+||+++. ++.++++|||++.......
T Consensus 129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------- 170 (271)
T 3dtc_A 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-------------------------------------- 170 (271)
T ss_dssp CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------------------------------------
T ss_pred eeecCCchHHEEEecccccccccCcceEEccCCccccccccc--------------------------------------
Confidence 999999999999985 6789999999884321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
.....|++.|+|||.+.+..++.++|
T Consensus 171 ------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~D 196 (271)
T 3dtc_A 171 ------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKGSD 196 (271)
T ss_dssp -----------------------------------------------------------CCGGGSCHHHHHHCCCSHHHH
T ss_pred ------------------------------------------------------ccCCCCccceeCHHHhccCCCCchhh
Confidence 00145799999999999888999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||||++|+|++ ||..................++......+...+++.+||..||.+|||+.+++++
T Consensus 197 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 197 VWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999999 6665544433333333332222222334455699999999999999999999874
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=264.79 Aligned_cols=208 Identities=17% Similarity=0.122 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..+.|+|++..+..++ .....+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~~~~~i~~~~~~~---~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~ 129 (296)
T 4hgt_A 53 IESKIYKMMQGGVGIPTIRWCG---AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129 (296)
T ss_dssp HHHHHHHHHTTSTTCCCEEEEE---EETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHHhcCCCCCCeeeeec---CCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4455778888999888777333 2345678899999999999996555569999999999999999999999999999
Q ss_pred cCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+||++ +..+.+||+|||++...........
T Consensus 130 Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------------------- 166 (296)
T 4hgt_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------- 166 (296)
T ss_dssp CCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred CCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc-------------------------------------------
Confidence 999999999 7889999999999854422210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCc-ccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP-MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+ .......||+.|+|||.+.+..++.++|||||||++
T Consensus 167 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 205 (296)
T 4hgt_A 167 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 205 (296)
T ss_dssp -----------------------------------------CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH
Confidence 00 000115689999999999999999999999999999
Q ss_pred HHhhC---CCCCChhh--HHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~--~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||...... ...+..+.. ....+..... .+...+++.+||+.||.+|||+.++++
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 99998 66532111 111111111 1111112122 345559999999999999999999987
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=261.16 Aligned_cols=196 Identities=15% Similarity=0.200 Sum_probs=148.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--c
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--I 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g--I 103 (712)
++..++..++||||+++++ ++.+. . ++++|+ .+++|.+++......+++..++.++.||+.||+|||++| |
T Consensus 72 ~E~~~l~~l~h~~i~~~~~-~~~~~----~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i 145 (287)
T 4f0f_A 72 REVFIMSNLNHPNIVKLYG-LMHNP----P-RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145 (287)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EETTT----T-EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHhCCCCCchhhhe-eecCC----C-eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 4556788899999999888 54322 2 456666 589999998666667999999999999999999999999 9
Q ss_pred eeccCCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 104 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+||||||+||+++.++. +|++|||+++.....
T Consensus 146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------------------------------- 182 (287)
T 4f0f_A 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------------------------------------------- 182 (287)
T ss_dssp BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-------------------------------------------
T ss_pred ecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-------------------------------------------
Confidence 99999999999987776 999999987432111
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--CCCCCCccchH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDIY 256 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDIw 256 (712)
.....|++.|+|||.+. ...++.++|||
T Consensus 183 --------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~ 212 (287)
T 4f0f_A 183 --------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKADTY 212 (287)
T ss_dssp --------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHH
T ss_pred --------------------------------------------------ccccCCCccccCchhhccCCCCcCchhhHH
Confidence 00146899999999984 44478999999
Q ss_pred HHHHHHHHhhC---CCCCChhhH-HHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC---PFSTGEEKT-RTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|+|++ ||....... .....+.....++... ...+...+++.+||..||.+|||+.++++
T Consensus 213 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 213 SFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999 665433221 1222222222222222 33445569999999999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=274.28 Aligned_cols=203 Identities=16% Similarity=0.158 Sum_probs=154.8
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..+++.+ +||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.|+.
T Consensus 123 ~E~~~l~~l~~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 198 (382)
T 3tt0_A 123 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 198 (382)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCchhhhhee-eecc---CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHH
Confidence 455567777 9999999888 5532 3456777777 5889999994322 3489999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+|||++.++.+||+|||+++..+.....
T Consensus 199 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~------------------------------- 247 (382)
T 3tt0_A 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY------------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT-------------------------------
T ss_pred HHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999998544222000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 248 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 270 (382)
T 3tt0_A 248 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRIY 270 (382)
T ss_dssp ---------------------------------------------------------CCCTTCCCGGGGSCHHHHHSCCC
T ss_pred ---------------------------------------------------------ccccCCCCCcceeCHHHhcCCCC
Confidence 00001356889999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|+|++ ||.... .......+.....+.......+...+|+.+||..||.+|||+.+++++
T Consensus 271 ~~~~DiwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 271 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999997 454332 233444444443333333344556699999999999999999999883
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=263.71 Aligned_cols=208 Identities=18% Similarity=0.163 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..+.|+|++..+. .+ ......+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~~~~~i~~~~-~~--~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~ 129 (296)
T 3uzp_A 53 IESKIYKMMQGGVGIPTIR-WC--GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129 (296)
T ss_dssp HHHHHHHHHTTSTTCCCEE-EE--EEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHHhhcCCCCCccc-cc--cCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 4555788889999887776 33 22345678889988999999996555569999999999999999999999999999
Q ss_pred cCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+||+++ .++.+||+|||++...........
T Consensus 130 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------------------- 166 (296)
T 3uzp_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------- 166 (296)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred CCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc-------------------------------------------
Confidence 9999999994 788999999999854322210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCc-ccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP-MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+ .......|++.|+|||.+.+..++.++|||||||++
T Consensus 167 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 205 (296)
T 3uzp_A 167 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 205 (296)
T ss_dssp -----------------------------------------CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccccccccCChhhhcCCCCCcchhhHHHHHHH
Confidence 00 000115789999999999999999999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhc---ccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~---~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... ....+..+. .....+...... +...+++.+||+.||.+|||+.++++
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 99999 6653211 111111111 111111222233 44559999999999999999999876
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=266.48 Aligned_cols=203 Identities=15% Similarity=0.173 Sum_probs=152.5
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-----------------CCChhHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYECLHI 87 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-----------------~l~~~~~~~i 87 (712)
++..+|..+ +||||+++++ ++.. ...+++++|+ .+++|.+++..... .+++.+++.+
T Consensus 75 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (313)
T 1t46_A 75 SELKVLSYLGNHMNIVNLLG-ACTI---GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150 (313)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHH
T ss_pred HHHHHHhhcccCCCeeeEEE-EEec---CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHH
Confidence 445567777 9999999888 5533 3456777777 58899999944322 4899999999
Q ss_pred HHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcc
Q 005147 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (712)
Q Consensus 88 ~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (712)
+.||+.||.|||++||+||||||+||+++.++.+|++|||++...+.....
T Consensus 151 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------- 201 (313)
T 1t46_A 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY----------------------------- 201 (313)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS-----------------------------
T ss_pred HHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998544322000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC
Q 005147 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (712)
Q Consensus 168 ~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (712)
.......|++.|+|||.+.+.
T Consensus 202 -----------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~ 222 (313)
T 1t46_A 202 -----------------------------------------------------------VVKGNARLPVKWMAPESIFNC 222 (313)
T ss_dssp -----------------------------------------------------------EECSSSEECGGGCCHHHHHHC
T ss_pred -----------------------------------------------------------eeccCCCCcceeeChHHhcCC
Confidence 000013568899999999888
Q ss_pred CCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++.++|||||||++|+|++ ||............+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 223 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 89999999999999999997 554433333333333333222222233445569999999999999999999987
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=263.54 Aligned_cols=201 Identities=21% Similarity=0.201 Sum_probs=151.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...++++++ .+++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 62 ~E~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 136 (281)
T 3cc6_A 62 SEAVIMKNLDHPHIVKLIG-IIEE----EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136 (281)
T ss_dssp HHHHHHHHHCCTTBCCEEE-EECS----SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcceEEE-EEcC----CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 233555555 689999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 137 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 169 (281)
T 3cc6_A 137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYY----------------------------------------------- 169 (281)
T ss_dssp CCCSGGGEEEEETTEEEECCCCGGGCC-----------------------------------------------------
T ss_pred CCCccceEEECCCCcEEeCccCCCccccccccc-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 170 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 207 (281)
T 3cc6_A 170 ------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207 (281)
T ss_dssp ---------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHH
Confidence 00013468899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....++......+...+++.+||..||.+|||+.+++++
T Consensus 208 lt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 208 LSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 96 55433322 2223333332222222334556699999999999999999999873
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=280.01 Aligned_cols=198 Identities=17% Similarity=0.139 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.++|...+. .+++..++.++.||+.||+|||++||+
T Consensus 235 ~E~~~l~~l~h~niv~~~~-~~~~--~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 235 AEASVMTQLRHSNLVQLLG-VIVE--EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC--TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhccCCCEEEEEE-EEEc--CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788999999999988 4422 22357778887 58899999954433 379999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++.....
T Consensus 312 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------------------------------------- 342 (450)
T 1k9a_A 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------- 342 (450)
T ss_dssp CSCCCGGGEEECTTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CCCCCHhhEEECCCCCEEEeeCCCccccccc-------------------------------------------------
Confidence 9999999999999999999999988432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|||||||++||
T Consensus 343 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e 378 (450)
T 1k9a_A 343 --------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 378 (450)
T ss_dssp ------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 000245788999999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+..+..++......+...++|.+||..||.+|||+.++++
T Consensus 379 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 379 IYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 997 56543322 233334343333333334455669999999999999999999876
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=263.48 Aligned_cols=204 Identities=19% Similarity=0.228 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .+++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 70 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H 144 (287)
T 2wei_A 70 REVELLKKLDHPNIMKLFE-ILED---SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVH 144 (287)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhccCCCccEEEE-EEeC---CCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788899999999888 4432 3456777777 5899999884433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+|++|||++.......
T Consensus 145 ~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 178 (287)
T 2wei_A 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------------------------------------------- 178 (287)
T ss_dssp SCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------------------------------------
T ss_pred cCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------------------------------------
Confidence 99999999997543 69999999874332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+. ++.++|||||||++
T Consensus 179 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l 212 (287)
T 2wei_A 179 ---------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212 (287)
T ss_dssp ---------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHHHHH
Confidence 00013578999999998764 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+.....+ +......+...++|.+||..||.+|||+.++|+||||+..
T Consensus 213 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 213 YILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99998 66544332 333333333322 2222334556699999999999999999999999999754
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=266.39 Aligned_cols=203 Identities=16% Similarity=0.173 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------------------CCCChh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-----------------------~~l~~~ 82 (712)
++..+|+.++||||+++++ ++.+ ...+++++|+ .|++|.+++.... ..+++.
T Consensus 75 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (314)
T 2ivs_A 75 SEFNVLKQVNHPHVIKLYG-ACSQ---DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150 (314)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHH
T ss_pred HHHHHHhhCCCCceeeEEE-EEec---CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHH
Confidence 4556788899999999888 4432 3456777776 5899999994322 238999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 151 ~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------------------------ 206 (314)
T 2ivs_A 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY------------------------ 206 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccc------------------------
Confidence 99999999999999999999999999999999999999999999988543221000
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
.......+++.|+|||
T Consensus 207 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 222 (314)
T 2ivs_A 207 ----------------------------------------------------------------VKRSQGRIPVKWMAIE 222 (314)
T ss_dssp ----------------------------------------------------------------ECSSCCCSCGGGCCHH
T ss_pred ----------------------------------------------------------------eeccCCCCcccccChh
Confidence 0000135688999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+
T Consensus 223 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9988889999999999999999997 4543322 2333334433333333334455669999999999999999999
Q ss_pred HhcC
Q 005147 319 LLQS 322 (712)
Q Consensus 319 iL~h 322 (712)
++++
T Consensus 302 l~~~ 305 (314)
T 2ivs_A 302 ISKD 305 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=262.52 Aligned_cols=203 Identities=13% Similarity=0.114 Sum_probs=156.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 59 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 133 (287)
T 1u59_A 59 REAQIMHQLDNPYIVRLIG-VCQ----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133 (287)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE----SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeEEEE-Eec----CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999888 542 2346777776 588999999666666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...+..... .
T Consensus 134 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 167 (287)
T 1u59_A 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y-------------- 167 (287)
T ss_dssp CCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e--------------
Confidence 999999999999999999999998544322100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 206 (287)
T 1u59_A 168 -----------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206 (287)
T ss_dssp -----------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 000013468899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||..... ...+..+.....+.......+...++|.+||..+|.+||++.+++++
T Consensus 207 lt~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 207 LSYGQKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HTTSCCTTTTCCT-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCcccCCH-HHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 97 5544332 23344444443333333444566699999999999999999999985
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=272.52 Aligned_cols=203 Identities=16% Similarity=0.165 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+. |++|.+++.+.+..+++.++..|+.||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (373)
T 2qol_A 95 GEASIMGQFDHPNIIRLEG-VVTK---SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170 (373)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEee---CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 4556788999999999888 5532 34667777775 89999999776667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++........ ..
T Consensus 171 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~-------------- 205 (373)
T 2qol_A 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY-------------- 205 (373)
T ss_dssp SCCCGGGEEECTTCCEEECCC-----------------------------------------------------------
T ss_pred CCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce--------------
Confidence 999999999999999999999998543221000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 206 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~el 243 (373)
T 2qol_A 206 ------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243 (373)
T ss_dssp --------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHH
Confidence 00002357789999999988899999999999999998
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+++.+||+.||.+||++.++++
T Consensus 244 lt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 244 MSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 86 66544332 333333333222222233345569999999999999999999886
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=272.30 Aligned_cols=207 Identities=17% Similarity=0.132 Sum_probs=154.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+.+++.++ ......+++++|+. |++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 73 ~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 150 (327)
T 3lxl_A 73 REIQILKALHSDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150 (327)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEE--CSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCceeEEEEEEe--cCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 5566788899999999888333 22345577888875 99999999654445999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++...+..... .
T Consensus 151 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 184 (327)
T 3lxl_A 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDY--------------------------------Y-------------- 184 (327)
T ss_dssp SCCSGGGEEEEETTEEEECCGGGCEECCTTCSE--------------------------------E--------------
T ss_pred CCCChhhEEECCCCCEEEcccccceecccCCcc--------------------------------c--------------
Confidence 999999999999999999999998543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 185 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 223 (327)
T 3lxl_A 185 -----------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223 (327)
T ss_dssp -----------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHH
Confidence 000113578899999999888899999999999999999
Q ss_pred hC---CCCCChhh--------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... ......+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 224 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 224 FTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99 33322111 11222222222233333334556699999999999999999999763
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-30 Score=266.84 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=145.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh------
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH------ 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH------ 99 (712)
.+...+..++||||+++++..+........+++++|+ .+++|.++++.. .+++..++.|+.||+.||+|||
T Consensus 51 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 128 (301)
T 3q4u_A 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGT 128 (301)
T ss_dssp HHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 3333344489999999988433333344567788887 588999999543 4899999999999999999999
Q ss_pred --hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 100 --SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 100 --s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
++||+||||||+||+++.++.+||+|||++......... .
T Consensus 129 ~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~------ 170 (301)
T 3q4u_A 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L------ 170 (301)
T ss_dssp TCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E------
T ss_pred cCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c------
Confidence 999999999999999999999999999988432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC------CCCC
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSC 251 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~ 251 (712)
........||+.|+|||.+.+. .++.
T Consensus 171 ------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 202 (301)
T 3q4u_A 171 ------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK 202 (301)
T ss_dssp ------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHH
T ss_pred ------------------------------------------------cccccccccccceeChhhhcCcCCCCcccCCc
Confidence 0000114689999999999877 4557
Q ss_pred ccchHHHHHHHHHhhCC-------------CCCC---hhhHHHHHh-hcccCCCchhh-----h-cCchhHHHHHHcCCC
Q 005147 252 ASDIYRLGVLLFELFCP-------------FSTG---EEKTRTMSS-LRHRVLPPQLL-----L-KFPKEASFCLWLLHP 308 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~p-------------f~~~---~~~~~~~~~-~~~~~~~~~~~-----~-~~~~~~~li~~~L~~ 308 (712)
++|||||||++|||+++ |... ......+.. .......+... . ..+...+|+.+||..
T Consensus 203 ~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 282 (301)
T 3q4u_A 203 RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQ 282 (301)
T ss_dssp HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCS
T ss_pred hhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhc
Confidence 99999999999999974 3221 111111111 11111111111 1 123455999999999
Q ss_pred CCCCCCCHHHHhc
Q 005147 309 EPSGRPKMGELLQ 321 (712)
Q Consensus 309 dP~~Rpt~~eiL~ 321 (712)
||.+|||+.++++
T Consensus 283 dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 283 NPSARLTALRIKK 295 (301)
T ss_dssp SGGGSCCHHHHHH
T ss_pred ChhhCCCHHHHHH
Confidence 9999999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=268.11 Aligned_cols=202 Identities=17% Similarity=0.222 Sum_probs=150.8
Q ss_pred cceeeccC--CCCCcccccccccccccccCceEEEEeeC-C-ccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 28 DGVELTHG--DHLRNQGGLSGVCENEAAIDPFVHAIEWG-D-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 28 ~~~~l~~~--~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g-~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+..++..+ +|+||+.+++ ++.. ...+++++++. + ++|.+++.... .+++.+++.++.||+.||+|||++||
T Consensus 96 E~~~l~~l~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~i 170 (320)
T 3a99_A 96 EVVLLKKVSSGFSGVIRLLD-WFER---PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGV 170 (320)
T ss_dssp HHHHHHHHCSSSCSBCCEEE-EEEC---SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhhccCCCCceEEEE-EEec---CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 44456666 4699999888 5432 24566777764 3 89999995433 48999999999999999999999999
Q ss_pred eeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+||||||+||+++ .++.+||+|||++.......
T Consensus 171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 204 (320)
T 3a99_A 171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------------------------------------- 204 (320)
T ss_dssp ECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC----------------------------------------------
T ss_pred EeCCCCHHHEEEeCCCCCEEEeeCcccccccccc----------------------------------------------
Confidence 9999999999999 77899999999874332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvl 261 (712)
.....||+.|+|||++.+..+ +.++|||||||+
T Consensus 205 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i 238 (320)
T 3a99_A 205 ----------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 238 (320)
T ss_dssp ----------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHhHHHH
Confidence 001457999999999987765 788999999999
Q ss_pred HHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 262 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 262 l~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+|||+++..+.......... ....+ ....+...+||.+||..||.+|||+.++++||||+....+
T Consensus 239 l~el~~g~~pf~~~~~~~~~--~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 239 LYDMVCGDIPFEHDEEIIRG--QVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHSSCSCCSHHHHHHC--CCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHCCCCCCChhhhhcc--ccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 99999933222222111111 11111 1223455699999999999999999999999999987653
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=265.40 Aligned_cols=203 Identities=18% Similarity=0.277 Sum_probs=147.6
Q ss_pred ccceeeccC----CCCCcccccccccccccccCceEEEEee--CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~----~H~ni~~~~~~~~~~~~~~~~~~l~~e~--~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++..++..+ +||||+++++ ++.. ...+++++++ .+++|.+++...+ .+++.+++.++.||+.||+|||+
T Consensus 83 ~e~~~l~~l~~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 157 (312)
T 2iwi_A 83 LEVALLWKVGAGGGHPGVIRLLD-WFET---QEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS 157 (312)
T ss_dssp HHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCCeeeEEE-EEec---CCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344455555 8999999888 4432 2345555554 6899999995543 48999999999999999999999
Q ss_pred cCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++ .++.++|+|||++.......
T Consensus 158 ~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 194 (312)
T 2iwi_A 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP------------------------------------------- 194 (312)
T ss_dssp HTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-------------------------------------------
T ss_pred CCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-------------------------------------------
Confidence 9999999999999999 78999999999874332110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRL 258 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSl 258 (712)
.....|++.|+|||++.+..+ +.++|||||
T Consensus 195 -------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 225 (312)
T 2iwi_A 195 -------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATVWSL 225 (312)
T ss_dssp -------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHH
T ss_pred -------------------------------------------------ccccCCcccccCceeeecCCCCCccchHHHH
Confidence 001457999999999977665 458999999
Q ss_pred HHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 259 GVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++|+|+++..+.......... ....+ ....+...+||.+||..||.+|||+.++++||||+.....
T Consensus 226 G~il~~l~~g~~pf~~~~~~~~~--~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~ 293 (312)
T 2iwi_A 226 GILLYDMVCGDIPFERDQEILEA--ELHFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293 (312)
T ss_dssp HHHHHHHHHSSCSCCSHHHHHHT--CCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred HHHHHHHHHCCCCCCChHHHhhh--ccCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence 99999999933322222222111 11111 1233455699999999999999999999999999987553
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=274.77 Aligned_cols=202 Identities=16% Similarity=0.167 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.++++..+..+++.+++.++.||+.||+|||++||+|
T Consensus 161 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 236 (377)
T 3cbl_A 161 QEARILKQYSHPNIVRLIG-VCTQ---KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236 (377)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEec---CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 4556788999999999888 5532 3457777877 589999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 237 rDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~----------------------------------------------- 269 (377)
T 3cbl_A 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYA----------------------------------------------- 269 (377)
T ss_dssp SCCSGGGEEECTTCCEEECCGGGCEECTTSEEE-----------------------------------------------
T ss_pred cccCHHHEEEcCCCcEEECcCCCceecCCCcee-----------------------------------------------
Confidence 999999999999999999999988532111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|||
T Consensus 270 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el 308 (377)
T 3cbl_A 270 -----------------------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308 (377)
T ss_dssp -----------------------------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHH
Confidence 000002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 309 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 309 FSLGASPYPNLSNQ-QTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HTTSCCSSTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 97 56544332 233333333322222223345569999999999999999999976
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-29 Score=261.99 Aligned_cols=198 Identities=16% Similarity=0.121 Sum_probs=147.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++||||+++++ ++.. ....+++++|+ .+++|.+++.... ..+++.++..++.||+.||.|||++||+
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 139 (278)
T 1byg_A 63 AEASVMTQLRHSNLVQLLG-VIVE--EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139 (278)
T ss_dssp HTHHHHTTCCCTTBCCEEE-EECC--C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEc--CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4666788999999999888 4322 22356777777 5789999995432 2378999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++...+..
T Consensus 140 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------------------------------------- 170 (278)
T 1byg_A 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------- 170 (278)
T ss_dssp CSCCSGGGEEECTTSCEEECCCCC--------------------------------------------------------
T ss_pred ccCCCcceEEEeCCCcEEEeecccccccccc-------------------------------------------------
Confidence 9999999999999999999999987432111
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 206 (278)
T 1byg_A 171 --------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 206 (278)
T ss_dssp -------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHH
Confidence 000245788999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 207 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 207 IYSFGRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHTTSCCSCTTSCG-GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCH-HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 997 5543322 2333334333333322333455669999999999999999999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-29 Score=258.09 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=153.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 52 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 52 EEAEVMMKLSHPKLVQLYG-VCLE---QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcc---CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4555788899999999888 4432 3456777777 588999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 128 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 160 (267)
T 3t9t_A 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------------------------------- 160 (267)
T ss_dssp SSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCCchheEEECCCCCEEEccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 198 (267)
T 3t9t_A 161 ------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198 (267)
T ss_dssp ------------------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 199 ~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 199 FSEGKIPYENRS-NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HTTSCCTTTTCC-HHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCCCCCCCCC-HHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 98 454333 23334444443332222233455669999999999999999999987
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-29 Score=268.41 Aligned_cols=202 Identities=15% Similarity=0.123 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------CCCCChh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------------~~~l~~~ 82 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++... ...+++.
T Consensus 99 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (343)
T 1luf_A 99 REAALMAEFDNPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174 (343)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHH
T ss_pred HHHHHHHhCCCCCEEEEEE-EEcc---CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHH
Confidence 4566788899999999888 5532 3456777776 588999999442 1458999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|+.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 175 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------- 229 (343)
T 1luf_A 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 229 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999998843211100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
+ .......|++.|+|||
T Consensus 230 --------~-------------------------------------------------------~~~~~~~~t~~y~aPE 246 (343)
T 1luf_A 230 --------Y-------------------------------------------------------KADGNDAIPIRWMPPE 246 (343)
T ss_dssp --------B-------------------------------------------------------C----CCBCGGGCCHH
T ss_pred --------c-------------------------------------------------------cccCCCcccceecChh
Confidence 0 0000135789999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 325 (343)
T 1luf_A 247 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCS 325 (343)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-HHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9998889999999999999999997 5554433 2333444444333322333445669999999999999999999
Q ss_pred Hhc
Q 005147 319 LLQ 321 (712)
Q Consensus 319 iL~ 321 (712)
+++
T Consensus 326 ~~~ 328 (343)
T 1luf_A 326 IHR 328 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 987
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-29 Score=267.28 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=148.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---CCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.++.||+.||+|||++|
T Consensus 84 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 159 (321)
T 2qkw_B 84 TEIETLSFCRHPHLVSLIG-FCDE---RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA 159 (321)
T ss_dssp HHHHGGGSCCCTTBCCEEE-ECCC---TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC---CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 5566788999999999888 5432 3456677776 5899999994432 34899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+|++|||++.........
T Consensus 160 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 195 (321)
T 2qkw_B 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQT-------------------------------------------- 195 (321)
T ss_dssp EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC--------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeeccccccccccccc--------------------------------------------
Confidence 999999999999999999999999988432111000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 196 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 231 (321)
T 2qkw_B 196 --------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231 (321)
T ss_dssp --------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHHHHH
Confidence 000114589999999999888899999999999999
Q ss_pred HHhhC---CCCCChhh-----HH-HHHhhccc----CCCchh-----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 263 FELFC---PFSTGEEK-----TR-TMSSLRHR----VLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 263 ~eLl~---pf~~~~~~-----~~-~~~~~~~~----~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||++ ||...... .. ........ ...+.. ........+++.+||..||++|||+.+++++
T Consensus 232 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp HHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99998 55432111 00 00000111 111111 1122334589999999999999999999874
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-29 Score=262.21 Aligned_cols=205 Identities=13% Similarity=0.095 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCccccccccccccccc--CceEEEEee-CCccHHHhhc-----CCCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI--DPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~--~~~~l~~e~-~g~sL~~~l~-----~~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+++.++||||+++++ ++...... ...++++++ .+++|.+++. .....+++.+++.|+.||+.||.||
T Consensus 85 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 163 (313)
T 3brb_A 85 SEAACMKDFSHPNVIRLLG-VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163 (313)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeeeeeE-EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 3455788899999999998 44332222 245666666 6889999982 2334589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++.++.+||+|||++.........
T Consensus 164 H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------- 203 (313)
T 3brb_A 164 SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY---------------------------------------- 203 (313)
T ss_dssp HTTTCCCCCCSGGGEEECTTSCEEECSCSCC-------------------------------------------------
T ss_pred HhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc----------------------------------------
Confidence 9999999999999999999999999999988543211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.......+++.|+|||.+.+..++.++|||||
T Consensus 204 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 235 (313)
T 3brb_A 204 ------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235 (313)
T ss_dssp -------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHH
T ss_pred ------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhHHH
Confidence 00001346889999999999999999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++|+|++ ||...... .....+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 236 G~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 236 GVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999998 44433322 333333333333333344456669999999999999999999987
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-29 Score=259.30 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+.||||+++++ ++.+ ...+++++|+ .|++|.+++.. ....+++..++.|+.||+.||+|||++||+
T Consensus 58 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 133 (288)
T 3kfa_A 58 KEAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133 (288)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcc---CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCcc
Confidence 4556788899999999888 5532 3456777777 57999999943 345589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.........
T Consensus 134 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---------------------------------------------- 167 (288)
T 3kfa_A 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 167 (288)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE----------------------------------------------
T ss_pred CCCCCcceEEEcCCCCEEEccCccceeccCCccc----------------------------------------------
Confidence 9999999999999999999999988543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 168 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 204 (288)
T 3kfa_A 168 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204 (288)
T ss_dssp -------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHH
Confidence 0001346889999999998899999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+|+.+||..||.+|||+.++++
T Consensus 205 ll~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 205 IATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHTTSCCSSTTCC-GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCC-HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 997 443322 22233333333333333333455669999999999999999999977
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-29 Score=266.57 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=153.2
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..+|..+ +||||+++++ ++.+ ...+++++|+. |++|.+++.... ..+++.+++.|+.
T Consensus 74 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 149 (327)
T 1fvr_A 74 GELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149 (327)
T ss_dssp HHHHHHTTCCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHH
T ss_pred HHHHHHHhccCCCchhhhce-eeee---CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHH
Confidence 345567788 9999999888 5532 34577788875 889999995543 3589999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 150 qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--------------------------------- 196 (327)
T 1fvr_A 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------------------------------- 196 (327)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---------------------------------
T ss_pred HHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
......+++.|+|||.+.+..+
T Consensus 197 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 218 (327)
T 1fvr_A 197 ----------------------------------------------------------KKTMGRLPVRWMAIESLNYSVY 218 (327)
T ss_dssp ----------------------------------------------------------CC----CCTTTCCHHHHHHCEE
T ss_pred ----------------------------------------------------------cccCCCCCccccChhhhccccC
Confidence 0001346788999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|||++ ||..... ......+.....+.......+...+||.+||..+|.+|||+.+++++
T Consensus 219 ~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 219 TTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcchHHHHHHHHHHcCCCCCCCCCcH-HHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999996 5544332 33444444443333333444566699999999999999999999873
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-28 Score=263.54 Aligned_cols=203 Identities=13% Similarity=0.158 Sum_probs=151.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (333)
T 1mqb_A 95 GEAGIMGQFSHHNIIRLEG-VIS---KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170 (333)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC---SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEe---cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 4555788899999999888 543 23467777777 478999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... .+
T Consensus 171 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~-------------- 205 (333)
T 1mqb_A 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY-------------- 205 (333)
T ss_dssp SCCCGGGEEECTTCCEEECCCCC---------------------------------------------------------
T ss_pred CCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc--------------
Confidence 999999999999999999999988543221000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 206 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 243 (333)
T 1mqb_A 206 ------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243 (333)
T ss_dssp -----------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHH
Confidence 00013457889999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ...+..+.....++......+...+++.+||..+|.+||++.++++
T Consensus 244 lt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 244 MTYGERPYWELSN-HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HTTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HcCCCCCcccCCH-HHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 87 5544333 2334444444333333333445569999999999999999999886
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-29 Score=264.70 Aligned_cols=203 Identities=14% Similarity=0.100 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~l~~~~~~~i~~qil~~l~ 96 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ...+++.+++.++.||+.||.
T Consensus 77 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 152 (322)
T 1p4o_A 77 NEASVMKEFNCHHVVRLLG-VVSQ---GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152 (322)
T ss_dssp HHHHHGGGCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEeeeEE-EEcc---CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 4566788999999999888 5432 3456777777 588999999432 134689999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||++||+||||||+||+++.++.+||+|||++........ +
T Consensus 153 ~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~----- 194 (322)
T 1p4o_A 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY---------------------------------Y----- 194 (322)
T ss_dssp HHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC---------------------------------E-----
T ss_pred HHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccc---------------------------------c-----
Confidence 99999999999999999999999999999998843211000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......|++.|+|||.+.+..++.++|||
T Consensus 195 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 224 (322)
T 1p4o_A 195 --------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224 (322)
T ss_dssp --------------------------------------------------EGGGSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccccCCCCCCCccChhhhccCCCCchhhHH
Confidence 000113568899999999988899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|+|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 225 slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 225 SFGVVLWEIATLAEQPYQGLSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHTSCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999997 4543332 23333343333333333344556699999999999999999999985
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-29 Score=268.16 Aligned_cols=203 Identities=16% Similarity=0.185 Sum_probs=151.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-------------CCCCChhHHHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-------------~~~l~~~~~~~i~~qi 91 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++.+++.++.||
T Consensus 98 ~E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi 173 (333)
T 2i1m_A 98 SELKIMSHLGQHENIVNLLG-ACTH---GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173 (333)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCeeeEEE-EEec---CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHH
Confidence 455567777 8999999888 5532 3456777777 588999999432 2347999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++|+|||++........ .
T Consensus 174 ~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~ 220 (333)
T 2i1m_A 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---------------------------------Y 220 (333)
T ss_dssp HHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT---------------------------------S
T ss_pred HHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc---------------------------------e
Confidence 9999999999999999999999999999999999998853311100 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.......|++.|+|||.+.+..++.
T Consensus 221 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 245 (333)
T 2i1m_A 221 -------------------------------------------------------IVKGNARLPVKWMAPESIFDCVYTV 245 (333)
T ss_dssp -------------------------------------------------------EECSSCEECGGGSCHHHHHHCCCCH
T ss_pred -------------------------------------------------------eecCCCCCCccccCHHHhccCCCCh
Confidence 0000135688999999999888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||++|||++ ||............+.....+.......+...+++.+||+.||.+|||+.++++
T Consensus 246 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999997 555433332333333333222222223445569999999999999999999987
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=258.39 Aligned_cols=204 Identities=18% Similarity=0.170 Sum_probs=150.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.. ...+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 78 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 153 (319)
T 2y4i_B 78 REVMAYRQTRHENVVLFMG-ACMS---PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILH 153 (319)
T ss_dssp TTGGGGTTCCCTTBCCCCE-EEEC---SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeEEEE-EEec---CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5666888999999999888 4432 2357777777 489999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++ ++.++++|||++...+.......
T Consensus 154 ~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~--------------------------------------------- 187 (319)
T 2y4i_B 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR--------------------------------------------- 187 (319)
T ss_dssp CCCCSTTEEEC---CCEECCCSCCC-------------------------------------------------------
T ss_pred cCCChhhEEEe-CCCEEEeecCCcccccccccccc---------------------------------------------
Confidence 99999999997 78999999998754321100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---------CCCCCccchH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCASDIY 256 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---------~~~~~~sDIw 256 (712)
........|++.|+|||.+.+ ..++.++|||
T Consensus 188 ----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~ 227 (319)
T 2y4i_B 188 ----------------------------------------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF 227 (319)
T ss_dssp ----------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHH
T ss_pred ----------------------------------------ccccccCCCcccccChHHhhhccccccccccCCCchhhHH
Confidence 000011458999999999875 3478999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||...... .....+.....+.... ...+...+++.+||..||.+|||+.++++
T Consensus 228 slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 228 ALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999998 66544333 3333333333333222 23345669999999999999999999988
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-29 Score=261.52 Aligned_cols=202 Identities=16% Similarity=0.097 Sum_probs=150.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++... .+++++++ .+++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 70 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 144 (291)
T 1u46_A 70 REVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144 (291)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4555678889999999888 44322 24555555 689999999655456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... .
T Consensus 145 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 178 (291)
T 1u46_A 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y-------------- 178 (291)
T ss_dssp SCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h--------------
Confidence 999999999999999999999988543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 179 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 217 (291)
T 1u46_A 179 -----------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217 (291)
T ss_dssp -----------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHH
Confidence 000013568889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.. ...++......+...+++.+||..||.+|||+.++++
T Consensus 218 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 218 FTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 55544333 23333322 2222222333455669999999999999999999987
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-29 Score=266.54 Aligned_cols=205 Identities=14% Similarity=0.079 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
++..+++.+.||||+++++ ++.. ....++++++ .|++|.+++... ...+++..+..|+.||+.||.|||++
T Consensus 76 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 151 (326)
T 3uim_A 76 TEVEMISMAVHRNLLRLRG-FCMT---PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151 (326)
T ss_dssp HHHHGGGTCCCTTBCCCCE-EECC---SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHhccCCCccceEE-EEec---CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556788999999999888 5532 2345666666 588999999543 23489999999999999999999999
Q ss_pred --CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 102 --GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 102 --gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 152 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 190 (326)
T 3uim_A 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH----------------------------------------- 190 (326)
T ss_dssp SSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC-----------------------------------------
T ss_pred CCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc-----------------------------------------
Confidence 9999999999999999999999999988543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
......||+.|+|||.+.+..++.++||||||
T Consensus 191 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 222 (326)
T 3uim_A 191 ------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG 222 (326)
T ss_dssp ------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCHHHhccCCCCccccchhHH
Confidence 00114589999999999888899999999999
Q ss_pred HHHHHhhCCCCCChhh----------HHHHHhhcc-cC----CC-----chhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 260 VLLFELFCPFSTGEEK----------TRTMSSLRH-RV----LP-----PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 260 vll~eLl~pf~~~~~~----------~~~~~~~~~-~~----~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
|++|+|+++..+.... ......... .. .. ...........+++.+||+.||.+|||+.++
T Consensus 223 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 223 VMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp HHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred HHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 9999999932222110 000111000 00 00 0011112344589999999999999999999
Q ss_pred hcCcC
Q 005147 320 LQSEF 324 (712)
Q Consensus 320 L~hp~ 324 (712)
++|-.
T Consensus 303 l~~L~ 307 (326)
T 3uim_A 303 VRMLE 307 (326)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99754
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-29 Score=263.94 Aligned_cols=207 Identities=13% Similarity=0.151 Sum_probs=145.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-----
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ----- 101 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~----- 101 (712)
+...+..+.||||+++++.+.........+++++|+. |++|.++++.. .+++.+++.|+.||+.||.|||++
T Consensus 81 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~ 158 (337)
T 3mdy_A 81 EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158 (337)
T ss_dssp HHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTT
T ss_pred HHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3333444699999998883332222235677888875 88999999544 389999999999999999999999
Q ss_pred ---CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 102 ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 102 ---gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 159 ~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------- 198 (337)
T 3mdy_A 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE---------------------------------------- 198 (337)
T ss_dssp CBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------------------------------------------
T ss_pred cCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc----------------------------------------
Confidence 9999999999999999999999999998543222000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc------
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA------ 252 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~------ 252 (712)
.........||+.|+|||++.+..++..
T Consensus 199 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 232 (337)
T 3mdy_A 199 ----------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM 232 (337)
T ss_dssp --------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHH
T ss_pred ----------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCccc
Confidence 0000011468999999999988776665
Q ss_pred cchHHHHHHHHHhhCC-------------CCCC---hhh-HHHHHhhcccCCCchhh------hcCchhHHHHHHcCCCC
Q 005147 253 SDIYRLGVLLFELFCP-------------FSTG---EEK-TRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPE 309 (712)
Q Consensus 253 sDIwSlGvll~eLl~p-------------f~~~---~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~d 309 (712)
+|||||||++|||+++ |... ... .............+.+. ...+...+|+.+||..|
T Consensus 233 ~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 312 (337)
T 3mdy_A 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHN 312 (337)
T ss_dssp HHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSS
T ss_pred cchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhC
Confidence 9999999999999974 2111 111 11111111111111111 11233558999999999
Q ss_pred CCCCCCHHHHhcC
Q 005147 310 PSGRPKMGELLQS 322 (712)
Q Consensus 310 P~~Rpt~~eiL~h 322 (712)
|.+|||+.+++++
T Consensus 313 P~~Rps~~ell~~ 325 (337)
T 3mdy_A 313 PASRLTALRVKKT 325 (337)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCCCHHHHHHH
Confidence 9999999999874
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-29 Score=258.91 Aligned_cols=201 Identities=12% Similarity=0.109 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++ ....+++++|+ .+++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 67 ~e~~~l~~l~h~~i~~~~~-~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H 140 (291)
T 1xbb_A 67 AEANVMQQLDNPYIVRMIG-IC----EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVH 140 (291)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EE----ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EE----CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCCeEc
Confidence 4555788899999999888 44 23456677777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... .
T Consensus 141 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 174 (291)
T 1xbb_A 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y-------------- 174 (291)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E--------------
T ss_pred CCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c--------------
Confidence 999999999999999999999988543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 175 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 213 (291)
T 1xbb_A 175 -----------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 213 (291)
T ss_dssp -----------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHH
Confidence 000012467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 214 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 214 FSYGQKPYRGMKG-SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 97 5544333 2333444443333333333455669999999999999999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-29 Score=277.56 Aligned_cols=200 Identities=13% Similarity=0.135 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++. ...+++++|+ .+++|.++|... ...+++.+++.++.||+.||+|||++||+
T Consensus 232 ~E~~~l~~l~h~~iv~l~~-~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 306 (454)
T 1qcf_A 232 AEANVMKTLQHDKLVKLHA-VVT----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 306 (454)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEC----SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhCCCCCEeeEEE-EEe----CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556788899999999887 553 3356777777 589999999543 23588999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 307 HrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 340 (454)
T 1qcf_A 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYT---------------------------------------------- 340 (454)
T ss_dssp CSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH----------------------------------------------
T ss_pred CCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee----------------------------------------------
Confidence 9999999999999999999999998543111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||++||
T Consensus 341 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e 377 (454)
T 1qcf_A 341 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 377 (454)
T ss_dssp -------------------------------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence 0000245778999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+|++
T Consensus 378 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 378 IVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 998 66544332 333444443333333334455669999999999999999999876
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-28 Score=282.59 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ..+++++|+ .|++|.++|......+++.+++.|+.||+.||+|||++||+|
T Consensus 385 ~E~~il~~l~hpniv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 459 (613)
T 2ozo_A 385 REAQIMHQLDNPYIVRLIG-VCQA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459 (613)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEES----SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-Eecc----CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 4555788899999999988 5533 346777777 589999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++..+..... +
T Consensus 460 rDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~-------------- 493 (613)
T 2ozo_A 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y-------------- 493 (613)
T ss_dssp SCCSGGGEEEEETTEEEECCCSTTTTCC----------------------------------------------------
T ss_pred CcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e--------------
Confidence 999999999999999999999998654322000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||++.+..++.++|||||||++|||
T Consensus 494 -----------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~el 532 (613)
T 2ozo_A 494 -----------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532 (613)
T ss_dssp -------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000002357889999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ...+..+..+..++......+...+|+.+||..+|.+|||+.++++
T Consensus 533 lt~G~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 533 LSYGQKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HTTSCCTTTTCCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHCCCCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 97 6654433 2344444444333333334456669999999999999999999865
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=258.71 Aligned_cols=200 Identities=16% Similarity=0.185 Sum_probs=144.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 83 ~e~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H 157 (309)
T 2h34_A 83 REARTAGRLQEPHVVPIHD-FGEI---DGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATH 157 (309)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhcCCCCeeEEEE-EEee---CCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCCc
Confidence 4556788899999999888 4432 3456777777 5789999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 158 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 190 (309)
T 2h34_A 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLT----------------------------------------------- 190 (309)
T ss_dssp SCCCGGGEEECTTSCEEECSCCC---------------------------------------------------------
T ss_pred CCCChHHEEEcCCCCEEEecCccCccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 191 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (309)
T 2h34_A 191 ------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228 (309)
T ss_dssp ------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC-chhhhcC-chhHHHHHHcCCCCCCCCC-CHHHHhc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRP-KMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~li~~~L~~dP~~Rp-t~~eiL~ 321 (712)
++ ||...... .....+.....+ ....... +...++|.+||..||.+|| +++++++
T Consensus 229 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 229 LTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 98 66554433 222222222222 2222333 4455999999999999999 8888776
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=277.50 Aligned_cols=201 Identities=18% Similarity=0.170 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++.. ...++++||+ .+++|.++|+. ....+++..++.|+.||+.||+|||++||+
T Consensus 265 ~E~~~l~~l~hpniv~l~~-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 340 (495)
T 1opk_A 265 KEAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340 (495)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4555788899999999888 5532 3456777777 58999999954 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 341 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 374 (495)
T 1opk_A 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 374 (495)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE----------------------------------------------
T ss_pred cCCCChhhEEECCCCcEEEeecccceeccCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||++||
T Consensus 375 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~e 411 (495)
T 1opk_A 375 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411 (495)
T ss_dssp -------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHH
Confidence 0000345778999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+......+......+...+||.+||+.||.+|||+.+|++
T Consensus 412 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 412 IATYGMSPYPGIDL-SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHTTSCCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 997 5544332 2333334333333322333455669999999999999999999987
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.8e-29 Score=263.08 Aligned_cols=214 Identities=18% Similarity=0.258 Sum_probs=136.6
Q ss_pred ccceeeccC-CCCCcccccccccc----cccccCceEEEEeeCCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCE----NEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~----~~~~~~~~~l~~e~~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..++..+ +||||+++++.+.. .......+++++|+.+++|.+++.. ....+++.+++.|+.||+.||.|||
T Consensus 74 ~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344456666 59999998873311 1233446899999999999999843 3345999999999999999999999
Q ss_pred hcC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 100 SQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 100 s~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
++| |+||||||+||+++.++.+||+|||++...+...... + .
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-------------------------------~--~--- 197 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-------------------------------W--S--- 197 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------------------------------
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccc-------------------------------c--c---
Confidence 999 9999999999999999999999999986543321000 0 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccc
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASD 254 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sD 254 (712)
. .............|++.|+|||++ .+..++.++|
T Consensus 198 --------~----------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~D 235 (337)
T 3ll6_A 198 --------A----------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQD 235 (337)
T ss_dssp --------------------------------------------------------------------CCTTSCSSHHHH
T ss_pred --------c----------------------------------cccccchhhccccCCCCcCChhhhhccccCCCChHHh
Confidence 0 000000001124689999999998 5666899999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||||++|+|++ ||...... . .+......+......+...+|+.+||..||.+|||+.+++++
T Consensus 236 v~slG~il~el~~g~~p~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 236 IWALGCILYLLCFRQHPFEDGAKL-R---IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcchhHH-H---hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999998 55432221 1 111111112222233556699999999999999999999885
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-29 Score=266.50 Aligned_cols=212 Identities=11% Similarity=0.036 Sum_probs=150.8
Q ss_pred ccceeeccCCCCCcccccccccc-----------c-ccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-----------N-EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-----------~-~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~ 93 (712)
++..++..+.||||++++..... . ......+++++|+.|++|.+++... ...+++.+++.|+.||+.
T Consensus 91 ~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 91 NEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHH
Confidence 44556888899999874331110 0 1124567888898899999999543 355999999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCC--cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
||.|||++||+||||||+||+++.++ .+||+|||+++......... .+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------~~ 220 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHV------------------------------AY 220 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCC------------------------------CC
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccc------------------------------cc
Confidence 99999999999999999999999888 89999999986542210000 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.........||+.|+|||.+.+..++.
T Consensus 221 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 247 (352)
T 2jii_A 221 -----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGCGPSR 247 (352)
T ss_dssp -----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTCCCCH
T ss_pred -----------------------------------------------------cccccccccCCccccCHHHHccCCCCc
Confidence 000001147899999999999989999
Q ss_pred ccchHHHHHHHHHhhC---CCCCChhhHHHHHhhc---ccCCCchh------hhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQL------LLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
++|||||||++|||++ ||.........+.... ....+... ....+...+|+.+||..||.+|||+.++
T Consensus 248 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 248 RSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 9999999999999999 5544321111111111 11111111 1123455699999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 328 ~~ 329 (352)
T 2jii_A 328 RN 329 (352)
T ss_dssp HH
T ss_pred HH
Confidence 77
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-29 Score=264.64 Aligned_cols=212 Identities=12% Similarity=0.099 Sum_probs=146.2
Q ss_pred eccceeeccCCCCCcccccccccc-cccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-- 101 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-- 101 (712)
+.+...+..+.||||+++++.... .......+++++|+. |++|.+++.... .++..+..|+.||+.||.|||++
T Consensus 55 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~ 132 (336)
T 3g2f_A 55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELP 132 (336)
T ss_dssp HHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhc
Confidence 344444667999999998862221 122333577888885 889999995443 58899999999999999999999
Q ss_pred -------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 102 -------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 102 -------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
||+||||||+|||++.++.+||+|||++...........
T Consensus 133 ~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~---------------------------------- 178 (336)
T 3g2f_A 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP---------------------------------- 178 (336)
T ss_dssp CGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC------------------------------------
T ss_pred cccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------------
Confidence 999999999999999999999999999855422210000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------C
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------A 247 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~ 247 (712)
. ..........||+.|+|||++.+ .
T Consensus 179 -----------~-------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 210 (336)
T 3g2f_A 179 -----------G-------------------------------------EEDNAAISEVGTIRYMAPEVLEGAVNLRDXE 210 (336)
T ss_dssp -------------------------------------------------------CCTTSCGGGCCHHHHTTCCCGGGHH
T ss_pred -----------c-------------------------------------ccccccccCCCccceeCchhhcCCccccccc
Confidence 0 00000112468999999999987 3
Q ss_pred CCCCccchHHHHHHHHHhhC---CCCCChhh-----------------HHHHHhhcccCCCchhhhcC-------chhHH
Q 005147 248 PVSCASDIYRLGVLLFELFC---PFSTGEEK-----------------TRTMSSLRHRVLPPQLLLKF-------PKEAS 300 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~---pf~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~-------~~~~~ 300 (712)
.++.++|||||||++|||++ ||++.... .............+.+...+ +...+
T Consensus 211 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (336)
T 3g2f_A 211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE 290 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHH
Confidence 46789999999999999997 44332110 01111111111111222211 23569
Q ss_pred HHHHcCCCCCCCCCCHHHHhc
Q 005147 301 FCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 301 li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||.+||..||++|||+.|+++
T Consensus 291 li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 291 TIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCChhhCcchHHHHH
Confidence 999999999999999999966
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-29 Score=263.88 Aligned_cols=206 Identities=18% Similarity=0.154 Sum_probs=150.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.||||+++++ ++.. .....+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 91 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 168 (326)
T 2w1i_A 91 REIEILKSLQHDNIVKYKG-VCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 168 (326)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeeEEE-EEEe-cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 5556788899999999888 4432 223356777777 588999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... +
T Consensus 169 ~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~-------------- 202 (326)
T 2w1i_A 169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y-------------- 202 (326)
T ss_dssp SCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E--------------
T ss_pred cCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c--------------
Confidence 999999999999999999999988543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......++..|+|||.+.+..++.++|||||||++|||
T Consensus 203 ---------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 241 (326)
T 2w1i_A 203 ---------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241 (326)
T ss_dssp ---------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred ---------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHH
Confidence 0 00013467889999999888899999999999999999
Q ss_pred hCCCCCChhhH------------------HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTGEEKT------------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++..+..... .....+.....++......+...++|.+||..||.+|||+.++++
T Consensus 242 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 242 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99432221110 111122222222222233455669999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=262.31 Aligned_cols=202 Identities=16% Similarity=0.165 Sum_probs=152.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.++.
T Consensus 89 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 164 (334)
T 2pvf_A 89 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 164 (334)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEeeEEE-EEcc---CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHH
Confidence 444566677 8999999888 5532 3456777777 5889999995432 2488999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+||+|||++...+.....
T Consensus 165 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------- 213 (334)
T 2pvf_A 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------- 213 (334)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSE-------------------------------
T ss_pred HHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 214 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 236 (334)
T 2pvf_A 214 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRVY 236 (334)
T ss_dssp ---------------------------------------------------------ECCSCCCCCGGGCCHHHHHHCEE
T ss_pred ---------------------------------------------------------cccCCCCcccceeChHHhcCCCc
Confidence 00001346889999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|+|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 237 ~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCcCcCC-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999997 554332 22333444443333333334455669999999999999999999987
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-29 Score=275.17 Aligned_cols=206 Identities=13% Similarity=0.132 Sum_probs=153.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.+ ..+++++|+ .+++|.++|.. .+..+++.+++.++.||+.||+|||++||+
T Consensus 228 ~E~~~l~~l~hp~iv~~~~-~~~~----~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 302 (452)
T 1fmk_A 228 QEAQVMKKLRHEKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302 (452)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC----CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788899999999887 5532 456777777 58899999953 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 303 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~---------------------------------------------- 336 (452)
T 1fmk_A 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYT---------------------------------------------- 336 (452)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCTTC------------------------------------------------------
T ss_pred CCCCChhhEEECCCCCEEECCCccceecCCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 337 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e 373 (452)
T 1fmk_A 337 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373 (452)
T ss_dssp -------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHH
Confidence 0001345788999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc--CcCCCC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 327 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~--hp~~~~ 327 (712)
|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++ ..++..
T Consensus 374 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 374 LTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 998 55543332 333444443333322333445569999999999999999999987 345543
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-29 Score=264.44 Aligned_cols=206 Identities=14% Similarity=0.135 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC------CCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~------~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..++..++||||+++++ ++.. ...+++++|+. |++|.+++.... ..+++.+++.++.||+.||.|||
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 157 (327)
T 2yfx_A 82 MEALIISKFNHQNIVRCIG-VSLQ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157 (327)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCCeEEE-EEcC---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 4556788899999999888 4432 33567777775 999999994432 34889999999999999999999
Q ss_pred hcCceeccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+||+++. ...++|+|||++.........
T Consensus 158 ~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 199 (327)
T 2yfx_A 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------------------------------- 199 (327)
T ss_dssp HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------------------------------------------
T ss_pred hCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc--------------------------------------
Confidence 999999999999999984 446999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......|++.|+|||.+.+..++.++|||
T Consensus 200 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 229 (327)
T 2yfx_A 200 --------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229 (327)
T ss_dssp ----------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCchhhHH
Confidence 000114578999999999888899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||++|+|++ ||..... ......+.....+.......+...++|.+||..||.+|||+.+++++.++
T Consensus 230 slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 230 SFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCcCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 99999999997 4543332 23333333333333223334556699999999999999999999998654
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=255.28 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.||||+++++ ++. ...+++++++ .|++|.+++.... ..+++.+++.++.||+.||.|||++||+
T Consensus 57 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 131 (279)
T 1qpc_A 57 AEANLMKQLQHQRLVRLYA-VVT----QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131 (279)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC----SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCcCcceEEE-EEc----CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788899999999887 443 2345666666 5899999995432 2589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.........
T Consensus 132 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------- 165 (279)
T 1qpc_A 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT---------------------------------------------- 165 (279)
T ss_dssp CSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE----------------------------------------------
T ss_pred ccCCCHhhEEEcCCCCEEECCCcccccccCcccc----------------------------------------------
Confidence 9999999999999999999999988543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 166 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 202 (279)
T 1qpc_A 166 -------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202 (279)
T ss_dssp -------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence 0001346788999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 203 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 203 IVTHGRIPYPGMTN-PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCcccCH-HHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 997 5544333 2333444333332222233445569999999999999999999886
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=261.02 Aligned_cols=204 Identities=18% Similarity=0.124 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.||||+++++ ++.+ .....+++++|+. +++|.+++.... +++.+++.|+.||+.||.|||++||+|
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ivH 157 (318)
T 3lxp_A 82 QEIDILRTLYHEHIIKYKG-CCED-AGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIH 157 (318)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE-TTTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcchhhEEE-EEec-CCCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999888 4433 2345677788874 889999995543 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... +
T Consensus 158 ~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~-------------- 191 (318)
T 3lxp_A 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y-------------- 191 (318)
T ss_dssp SCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c--------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 192 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 230 (318)
T 3lxp_A 192 -----------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230 (318)
T ss_dssp -----------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000113578899999999988899999999999999999
Q ss_pred hCC---CCCChhh--------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCP---FSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~p---f~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++ |...... ......+.....++......+...+||.+||..||.+|||+.++++
T Consensus 231 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 993 3322111 0111222222222333333455669999999999999999999986
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=279.44 Aligned_cols=210 Identities=16% Similarity=0.146 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccc---cccCceEEEEee-CCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~---~~~~~~~l~~e~-~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++..+|..++||||+.+++ ++... .....+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||+|||+
T Consensus 61 ~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 61 LEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp HHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566788899999999887 44321 124456677777 5999999995432 358999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
+||+||||||+||+++.++. ++++|||.+...+....
T Consensus 140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~---------------------------------------- 179 (676)
T 3qa8_A 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---------------------------------------- 179 (676)
T ss_dssp TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC----------------------------------------
T ss_pred CCCccCCCCHHHeEeecCCCceeEEEcccccccccccccc----------------------------------------
Confidence 99999999999999997665 89999998854321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.....|++.|+|||.+.+..++.++||||
T Consensus 180 ---------------------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIwS 208 (676)
T 3qa8_A 180 ---------------------------------------------------CTEFVGTLQYLAPELLEQKKYTVTVDYWS 208 (676)
T ss_dssp ---------------------------------------------------CCCCCSCCTTCSSCSSCCSCCSTTHHHHH
T ss_pred ---------------------------------------------------cccccCCcccCChHHhccCCCCchhHHHH
Confidence 01146899999999999999999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhc-------------cc--------CCCchhhhcC-chhHHHHHHcCCCCCCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLR-------------HR--------VLPPQLLLKF-PKEASFCLWLLHPEPSG 312 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~-------------~~--------~~~~~~~~~~-~~~~~li~~~L~~dP~~ 312 (712)
|||++|+|++ ||.+..........+. .+ ..|..+.... +...+||.+||..||.+
T Consensus 209 LGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~k 288 (676)
T 3qa8_A 209 FGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQ 288 (676)
T ss_dssp HHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC-
T ss_pred HHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhh
Confidence 9999999999 6654322211100000 00 0011111122 23448999999999999
Q ss_pred CCCHHHHhcCcCCCCC
Q 005147 313 RPKMGELLQSEFLNEP 328 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~ 328 (712)
|||+.++|+||||+..
T Consensus 289 RPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 289 RGTDPQNPNVGCFQAL 304 (676)
T ss_dssp --CCTTCCCCTTHHHH
T ss_pred CcCHHHHhcCHHHHHH
Confidence 9999999999998764
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=258.82 Aligned_cols=214 Identities=13% Similarity=0.144 Sum_probs=151.1
Q ss_pred ccceeeccCCCCCcccccccccc-cccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..++..++||||+++++ ++. .......+++++|+ .+++|.+++.. .+..+++.+++.++.||+.||.|||++
T Consensus 75 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 153 (317)
T 2buj_A 75 READMHRLFNHPNILRLVA-YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153 (317)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcCCCCeeeEEE-EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4556788899999999988 443 22233456677776 58899999843 345699999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.++++|||++.......... .
T Consensus 154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~-----------------------~------------------ 192 (317)
T 2buj_A 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS-----------------------R------------------ 192 (317)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESH-----------------------H------------------
T ss_pred CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccc-----------------------c------------------
Confidence 99999999999999999999999999874321110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRL 258 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSl 258 (712)
..... .......|++.|+|||.+.+.. ++.++|||||
T Consensus 193 ----------------------~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 232 (317)
T 2buj_A 193 ----------------------QALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232 (317)
T ss_dssp ----------------------HHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHH
T ss_pred ----------------------ccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHHH
Confidence 00000 0001146799999999997665 6899999999
Q ss_pred HHHHHHhhCCCCCChhhH----HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|+++..+..... .....+......+......+...++|.+||..||.+|||+.+++++
T Consensus 233 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 233 GCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 999999999433332110 1111112222222222334556699999999999999999999985
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=272.86 Aligned_cols=208 Identities=17% Similarity=0.175 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..+.|++++..+..++ .....++++||+.|++|.+++......+++.+++.|+.||+.||+|||++|||||
T Consensus 51 ~E~~il~~L~~~~~i~~i~~~~---~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 127 (483)
T 3sv0_A 51 YESKIYRILQGGTGIPNVRWFG---VEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHR 127 (483)
T ss_dssp HHHHHHHHTTTSTTCCCEEEEE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHhcCCCCCCeEEEEE---eeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 3445677788877666555232 3445678999999999999996555569999999999999999999999999999
Q ss_pred cCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+|||| +..+.+||+|||+++..........
T Consensus 128 DIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------------------- 164 (483)
T 3sv0_A 128 DIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------------------- 164 (483)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred ccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc-------------------------------------------
Confidence 999999999 5889999999999865422210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+. ......||+.|+|||.+.+..++.++|||||||+|
T Consensus 165 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil 203 (483)
T 3sv0_A 165 -----------------------------------------IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL 203 (483)
T ss_dssp -----------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence 000 00125789999999999999999999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhccc---CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~~~---~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... ....+..+... .....+...+ +...+|+.+||..+|.+||++.+|++
T Consensus 204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 204 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99998 6654221 11122221111 1112222333 34559999999999999999998876
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=282.71 Aligned_cols=201 Identities=13% Similarity=0.116 Sum_probs=152.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ..++++||+ .+++|.++|... ..+++.+++.|+.||+.||+|||++||||
T Consensus 419 ~E~~il~~l~hpnIv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 492 (635)
T 4fl3_A 419 AEANVMQQLDNPYIVRMIG-ICEA----ESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVH 492 (635)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEES----SSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec----CCEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeC
Confidence 3455688899999999988 6532 346677777 589999999544 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........ .
T Consensus 493 rDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--------------------------------~-------------- 526 (635)
T 4fl3_A 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y-------------- 526 (635)
T ss_dssp SCCSGGGEEEEETTEEEECCTTHHHHTTC---------------------------------------------------
T ss_pred CCCChHhEEEeCCCCEEEEEcCCccccccCccc--------------------------------c--------------
Confidence 999999999999999999999998543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||++.+..++.++|||||||++|||
T Consensus 527 -----------------------------------------~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~el 565 (635)
T 4fl3_A 527 -----------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565 (635)
T ss_dssp -------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000113467889999999998999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+||.+||..||++|||+.+|++
T Consensus 566 lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 566 FSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 97 56544332 344444444333333334455669999999999999999999976
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=268.38 Aligned_cols=202 Identities=15% Similarity=0.174 Sum_probs=148.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|..++||||+++++ ++.. .....+++++|+. |++|.+++.... ..+++.+++.|+.||+.||+|||++||
T Consensus 56 ~E~~~l~~l~hpnIv~~~~-~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 133 (396)
T 4eut_A 56 REFEVLKKLNHKNIVKLFA-IEEE-TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133 (396)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC-TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCCCeEEE-eecc-CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 5566788999999999988 4433 2344667777775 899999995432 238999999999999999999999999
Q ss_pred eeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 104 VVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 104 vHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||||||+||++ +..+.+||+|||+++......
T Consensus 134 vH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 170 (396)
T 4eut_A 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------- 170 (396)
T ss_dssp ECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-------------------------------------------
T ss_pred EECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-------------------------------------------
Confidence 999999999999 677789999999885432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--------CCCCC
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APVSC 251 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~ 251 (712)
......||+.|+|||++.+ ..++.
T Consensus 171 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 202 (396)
T 4eut_A 171 ------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202 (396)
T ss_dssp ------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHH
T ss_pred ------------------------------------------------ccccccCCccccCHHHhhccccccccccCCCc
Confidence 0001468999999999865 45788
Q ss_pred ccchHHHHHHHHHhhC---CCCCC---hhhHHHHHhhcccCCCch-----------------------hhhcC-chhHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKF-PKEASF 301 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~---~~~~~~~~~~~~~~~~~~-----------------------~~~~~-~~~~~l 301 (712)
++|||||||++|||++ ||.+. ......+..+.....+.. +.... +...++
T Consensus 203 ~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l 282 (396)
T 4eut_A 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHH
Confidence 9999999999999998 55432 222333433333222110 00111 233489
Q ss_pred HHHcCCCCCCCCCCHHHHhc
Q 005147 302 CLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.+||..||++|||+.++++
T Consensus 283 l~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 283 LANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHSCCCTTTSCCHHHHHH
T ss_pred HHHhhccChhhhccHHHHHH
Confidence 99999999999999999866
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-28 Score=252.22 Aligned_cols=183 Identities=17% Similarity=0.250 Sum_probs=136.0
Q ss_pred ccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 33 THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
...+||||+++++ ++.. ......+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++||+|||||
T Consensus 66 ~~~~h~~i~~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk 144 (299)
T 3m2w_A 66 RASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144 (299)
T ss_dssp HHTTSTTBCCEEE-EEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred HhccCCCchhHHh-hhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 6679999999888 4432 22345678888875 78999999443 3469999999999999999999999999999999
Q ss_pred CCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 110 PSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 110 P~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+||+++. ++.++++|||++...
T Consensus 145 p~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------------ 170 (299)
T 3m2w_A 145 PENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------------ 170 (299)
T ss_dssp GGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------------
T ss_pred HHHEEEecCCCCCcEEEecccccccc------------------------------------------------------
Confidence 99999997 788999999877211
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.+..++.++|||||||++|||+
T Consensus 171 ----------------------------------------------------------~~~~~~~~~DiwslG~il~el~ 192 (299)
T 3m2w_A 171 ----------------------------------------------------------TGEKYDKSCDMWSLGVIMYILL 192 (299)
T ss_dssp ----------------------------------------------------------TTCGGGGHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------ccccCCchhhHHHHHHHHHHHH
Confidence 0133678999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcc----c--CCCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRH----R--VLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~----~--~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||....... ....... . ..+... ....+...+|+.+||..||.+|||+.++|+||||+...
T Consensus 193 tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 193 CGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 8 554332211 1111111 1 111111 22344556999999999999999999999999998654
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=254.33 Aligned_cols=201 Identities=17% Similarity=0.220 Sum_probs=146.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++ ++.. ...+++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 81 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 156 (310)
T 2wqm_A 81 KEIDLLKQLNHPNVIKYYA-SFIE---DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156 (310)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEc---CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4566788899999999887 4422 3456777777 57899999842 3455899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++|+|||++........
T Consensus 157 i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 191 (310)
T 2wqm_A 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 191 (310)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCC--------------------------------------------------------
T ss_pred eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 192 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 226 (310)
T 2wqm_A 192 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226 (310)
T ss_dssp ----------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHH
Confidence 00014679999999999998999999999999999
Q ss_pred HHhhC---CCCCChh-hHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||..... .......+.....++..... .+...+++.+||..||.+|||+.++++
T Consensus 227 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999 5654321 22233334444444333233 344569999999999999999999987
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=277.05 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.++||||+++++ ++.+ ..++++||+ .+++|.++|.. .+..+++.+++.|+.||+.||+|||++||+
T Consensus 311 ~E~~~l~~l~hpniv~~~~-~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv 385 (535)
T 2h8h_A 311 QEAQVMKKLRHEKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385 (535)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEee----ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788899999999987 5532 456777777 58899999953 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 386 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 419 (535)
T 2h8h_A 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYT---------------------------------------------- 419 (535)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH----------------------------------------------
T ss_pred CCCCCHhhEEEcCCCcEEEcccccceecCCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||+|||
T Consensus 420 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~e 456 (535)
T 2h8h_A 420 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 456 (535)
T ss_dssp -------------------------------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0000345788999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC--cCCCCC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS--EFLNEP 328 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h--p~~~~~ 328 (712)
|++ ||..... ......+......+......+...+||.+||..||++|||+.+|++. .++...
T Consensus 457 l~t~g~~P~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 457 LTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HTTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 998 5554333 23334444433322222333455699999999999999999999873 455443
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-28 Score=279.55 Aligned_cols=200 Identities=19% Similarity=0.176 Sum_probs=152.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ..++++||+ .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 440 ~E~~~l~~l~HpnIv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 514 (656)
T 2j0j_A 440 QEALTMRQFDHPHIVKLIG-VITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514 (656)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec----CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4455688899999999987 5522 345667776 589999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 515 rDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~----------------------------------------------- 547 (656)
T 2j0j_A 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----------------------------------------------- 547 (656)
T ss_dssp SCCSGGGEEEEETTEEEECCCCCCCSCCC---------------------------------------------------
T ss_pred cccchHhEEEeCCCCEEEEecCCCeecCCCcce-----------------------------------------------
Confidence 999999999999999999999998543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 548 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el 585 (656)
T 2j0j_A 548 ------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585 (656)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 00013467899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... ..+..+.....++......+...+++.+||..||.+|||+.++++
T Consensus 586 lt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 586 LMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 86 56544332 333444443333333334455669999999999999999999976
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-28 Score=253.69 Aligned_cols=202 Identities=15% Similarity=0.152 Sum_probs=146.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..+.||||+++++ ++.+ ...+++++++ .|++|.+++.. ....+++..++.|+.||+.||.|||++||
T Consensus 79 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 154 (307)
T 2nru_A 79 QEIKVMAKCQHENLVELLG-FSSD---GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154 (307)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCeEEEEE-EEec---CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 4556788899999999888 5432 3456677776 59999999943 23458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++...+.....
T Consensus 155 ~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------- 189 (307)
T 2nru_A 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--------------------------------------------- 189 (307)
T ss_dssp ECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC---------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988533211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.......|++.|+|||.+.+ .++.++|||||||++|
T Consensus 190 -------------------------------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~ 225 (307)
T 2nru_A 190 -------------------------------------------VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLL 225 (307)
T ss_dssp -------------------------------------------EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHH
Confidence 00011468999999998865 4899999999999999
Q ss_pred HhhC---CCCCChhh---HHHHHhhcc----------cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 264 ELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 264 eLl~---pf~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|++ ||...... ......+.. ...+...........+++.+||..+|.+|||+.++++
T Consensus 226 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 226 EIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999 55432211 111111111 1111111112234458999999999999999999986
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-28 Score=268.12 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=135.8
Q ss_pred cCceEEEEeeCCccHHHhhc------CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecc
Q 005147 54 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 127 (712)
Q Consensus 54 ~~~~~l~~e~~g~sL~~~l~------~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg 127 (712)
...+++++++.+++|.++++ ..+..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44688899999999999883 334558888999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 005147 128 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 207 (712)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (712)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 87432110
Q ss_pred ccccccccccccccCCCCcccccccccCccccCcccc----------cCCCCCCccchHHHHHHHHHhhC---CCCCChh
Q 005147 208 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 274 (712)
Q Consensus 208 ~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~ 274 (712)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55568999999999999999998 6654332
Q ss_pred hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 275 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.. ....+... .....+...+||.+||..||.+|||+.++++||||+.
T Consensus 323 ~~-~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 323 LG-GSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp GS-CSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred hh-hHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 21 11111110 0112245559999999999999999999999999864
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-28 Score=258.66 Aligned_cols=200 Identities=12% Similarity=0.119 Sum_probs=142.5
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh--------hcCcee
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--------SQGIVV 105 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH--------s~gIvH 105 (712)
+.||||+++++.+.........+++++|+ .+++|.+++.+. .+++.+++.++.||+.||.||| ++||+|
T Consensus 93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH 170 (342)
T 1b6c_B 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170 (342)
T ss_dssp CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEEC
T ss_pred cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeee
Confidence 89999999988333222222367788887 578999999543 3899999999999999999999 899999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... .
T Consensus 171 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~-------------- 204 (342)
T 1b6c_B 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I-------------- 204 (342)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E--------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c--------------
Confidence 999999999999999999999988432211000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC------CCCccchHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLG 259 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~sDIwSlG 259 (712)
........||+.|+|||.+.+.. ++.++||||||
T Consensus 205 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG 244 (342)
T 1b6c_B 205 ----------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244 (342)
T ss_dssp ----------------------------------------EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHH
Confidence 00001146899999999997763 34689999999
Q ss_pred HHHHHhhCC-------------CCCCh----hhHHHHHhhcccCCCchhhh------cCchhHHHHHHcCCCCCCCCCCH
Q 005147 260 VLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLL------KFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 260 vll~eLl~p-------------f~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
|++|||+++ |.... ........+......+.+.. ......+++.+||..||.+|||+
T Consensus 245 ~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 324 (342)
T 1b6c_B 245 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 324 (342)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCH
Confidence 999999973 32211 11222222222222222221 11234589999999999999999
Q ss_pred HHHhcC
Q 005147 317 GELLQS 322 (712)
Q Consensus 317 ~eiL~h 322 (712)
.+++++
T Consensus 325 ~~i~~~ 330 (342)
T 1b6c_B 325 LRIKKT 330 (342)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.4e-28 Score=260.13 Aligned_cols=193 Identities=12% Similarity=0.074 Sum_probs=139.0
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|....|+|++.+++ ++. .....+++||+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||||
T Consensus 120 ~l~~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivH 195 (365)
T 3e7e_A 120 RLKPSMQHMFMKFYS-AHL---FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIH 195 (365)
T ss_dssp HSCGGGGGGBCCEEE-EEE---CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred Hhhhhhhhhhhhhhe-eee---cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 345566999999887 432 23456777777 58999999942 3455999999999999999999999999999
Q ss_pred ccCCCCceeecC-----------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 106 HNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 106 rDLkP~NIll~~-----------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|||||+|||++. .+.+||+|||+++......-.
T Consensus 196 rDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------------ 239 (365)
T 3e7e_A 196 GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG------------------------------------ 239 (365)
T ss_dssp CCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTT------------------------------------
T ss_pred CCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCC------------------------------------
Confidence 999999999988 899999999998432110000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
......+||++|+|||++.+..|+.++|
T Consensus 240 ----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D 267 (365)
T 3e7e_A 240 ----------------------------------------------------TIFTAKCETSGFQCVEMLSNKPWNYQID 267 (365)
T ss_dssp ----------------------------------------------------EEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred ----------------------------------------------------ceeeeecCCCCCCChHHhcCCCCCcccc
Confidence 0001157899999999999999999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||....... .. ....++.. .......+++..||..+|.+|++..+.|.
T Consensus 268 iwslG~il~elltg~~pf~~~~~~~---~~-~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 268 YFGVAATVYCMLFGTYMKVKNEGGE---CK-PEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEETTE---EE-ECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCCCCc---ee-echhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 9999999999999 443322110 00 01111111 11123348999999999999975444333
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=255.02 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=125.2
Q ss_pred cCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh-hcCceeccCCCCceeecCCC------------
Q 005147 54 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------ 119 (712)
Q Consensus 54 ~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH-s~gIvHrDLkP~NIll~~~~------------ 119 (712)
...++++||+ .+++|.+.+.+ ..+++.+++.|++||+.||+||| ++||+||||||+|||++.++
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 4578888888 47766666633 34899999999999999999999 99999999999999999877
Q ss_pred --------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 120 --------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 120 --------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
.+||+|||+++....
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~~~--------------------------------------------------------- 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLERD--------------------------------------------------------- 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEEET---------------------------------------------------------
T ss_pred ccccCCCceEEEeeccccEecCC---------------------------------------------------------
Confidence 788888887732110
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH-HHHhhCCCC
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFS 270 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl-l~eLl~pf~ 270 (712)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 235 --------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp --------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC
T ss_pred --------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC
Confidence 0146899999999998776 899999998777 666776555
Q ss_pred CChhhH---HHHHhhc----cc-CCCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHh-cCcCCC
Q 005147 271 TGEEKT---RTMSSLR----HR-VLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 326 (712)
Q Consensus 271 ~~~~~~---~~~~~~~----~~-~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL-~hp~~~ 326 (712)
+..... .....+. .. ..+.. .....+...+||.+||+.| |+.|+| +||||+
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 543321 1111111 11 11122 2233455569999999976 999999 999995
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-27 Score=273.36 Aligned_cols=193 Identities=19% Similarity=0.239 Sum_probs=143.5
Q ss_pred ccceeeccCCCCCcccccccccccccc-cC-ceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA-ID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~-~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++..... .. .+|++||+ .|++|.+++.. .+++.+++.|+.||+.||.|||++||
T Consensus 128 ~E~~~l~~l~hp~iv~~~~-~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~gi 203 (681)
T 2pzi_A 128 AERQFLAEVVHPSIVQIFN-FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGL 203 (681)
T ss_dssp HHHGGGGGCCCTTBCCEEE-EEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCcCeEee-eEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5566789999999999998 4433222 12 25778887 58999998744 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||||+|||++. +.+||+|||+++.....
T Consensus 204 iHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~------------------------------------------------ 234 (681)
T 2pzi_A 204 VYNDLKPENIMLTE-EQLKLIDLGAVSRINSF------------------------------------------------ 234 (681)
T ss_dssp ECCCCSGGGEEECS-SCEEECCCTTCEETTCC------------------------------------------------
T ss_pred eecccChHHeEEeC-CcEEEEecccchhcccC------------------------------------------------
Confidence 99999999999987 48999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
....||+.|+|||++.+. ++.++|||||||++|
T Consensus 235 ----------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~ 267 (681)
T 2pzi_A 235 ----------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLA 267 (681)
T ss_dssp ----------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHH
Confidence 014689999999998765 489999999999999
Q ss_pred HhhCCCCCChhhHHHHHhhcccCC-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFCPFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++++.+.... ...... ........+...+||.+||..||.+||+..+.+.|+|+
T Consensus 268 ~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 268 ALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred HHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 999965543321 011111 11122234556699999999999999988777776654
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=208.16 Aligned_cols=199 Identities=14% Similarity=0.226 Sum_probs=157.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+|...|+++.|++||+.++....+. ...+...+.||.+.|..+.|..+.....+...+.+....+|++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 567888999999999999764443222 1234568899999999999932222345555555544455999
Q ss_pred cCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC--
Q 005147 560 NQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-- 629 (712)
Q Consensus 560 ~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-- 629 (712)
.++. +.+|...|.+++|+|+ +.+|++|+.|++|++||+++... .......+|...|.+++|+|..
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-----BCCEEEECCSSCEEEEEECCCC--
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-----eeeeeeecccCccceEeecCCccc
Confidence 8763 2358999999999997 88999999999999999975311 1234567899999999999942
Q ss_pred ----------CCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCcEEEEEEecCC--CCEEEEEECCCcEEEEeCCCC
Q 005147 630 ----------KSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 630 ----------~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~--~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+.+||+|+.|++|+|||++++. .+.++.+|...|++|+|+|.. +.+|||||.|++|+|||++++
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 4699999999999999999876 677899999999999999832 589999999999999999874
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-24 Score=224.24 Aligned_cols=170 Identities=16% Similarity=0.148 Sum_probs=126.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++||||+++++ ++.. ...++++||+ .|++|.++++.. ....++..|+.||+.||+|||++||+|
T Consensus 80 ~e~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~givH 152 (286)
T 3uqc_A 80 SRTLRLSRIDKPGVARVLD-VVHT---RAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVAL 152 (286)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCcceeeE-EEEE---CCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4445678899999999888 4432 3457788887 589999999442 356678999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.+|.+|+++
T Consensus 153 ~Dikp~NIll~~~g~~kl~~------------------------------------------------------------ 172 (286)
T 3uqc_A 153 SIDHPSRVRVSIDGDVVLAY------------------------------------------------------------ 172 (286)
T ss_dssp CCCSGGGEEEETTSCEEECS------------------------------------------------------------
T ss_pred CCCCcccEEEcCCCCEEEEe------------------------------------------------------------
Confidence 99999999999999888842
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+.|++| ++.++|||||||++|||
T Consensus 173 --------------------------------------------------~~~~~~-------~~~~~Di~slG~il~el 195 (286)
T 3uqc_A 173 --------------------------------------------------PATMPD-------ANPQDDIRGIGASLYAL 195 (286)
T ss_dssp --------------------------------------------------CCCCTT-------CCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------ccccCC-------CCchhHHHHHHHHHHHH
Confidence 224443 78999999999999999
Q ss_pred hC---CCCCChhhHHH---HHhhcccCCCc-hhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEKTRT---MSSLRHRVLPP-QLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~~---~~~~~~~~~~~-~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||......... ...+.....++ .... ..+...++|.+||+.||.+| |+.++++
T Consensus 196 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 196 LVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99 77654332111 01111111111 1222 23445599999999999999 9999987
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=212.84 Aligned_cols=195 Identities=13% Similarity=0.084 Sum_probs=154.8
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG 562 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~ 562 (712)
.+|...|+++.|+|||..++....+. ...+...+.||.+.|..+.| ++....++...+.+....+||++++
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~-~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA-SPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CSSCTTEEEEEETTSCEEEEETTSS
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe-cCCCCCceeeecccccccccccccc
Confidence 47888999999999999764443332 23355678999999999999 5544455556666666666999987
Q ss_pred cee------cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 563 DLL------NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 563 ~~~------~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+.. .|...+.+++|+| ++++|++|+.|++|+|||+++. .......+|...|++|+|+|....+|||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~fsp~g~~~las 275 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-------SCVLSSAVHSQCVTGLVFSPHSVPFLAS 275 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---------CCEEEECCSSCEEEEEECSSSSCCEEE
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEEccCCCeEEEE
Confidence 643 3567799999999 5679999999999999999763 2334566899999999999964578999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 636 SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|+.||+|+|||+++++++ .+.+|.+.|++|+|+|.+..+|+|||.|++|++|++.+..
T Consensus 276 gs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 276 LSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999999999998765 5789999999999999555689999999999999998754
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=214.82 Aligned_cols=203 Identities=13% Similarity=0.078 Sum_probs=157.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+|||..++....+. .......+++|...+..+.| ++..+.++...+.+....+||+++
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~-s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA-CPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTTCSSCEEEEETTSCEEECCTTS
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE-ccCCCceeeeeccCCceEEEECCC
Confidence 347888899999999998764443332 22345678899999999999 555566666666665556699988
Q ss_pred Ccee------cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 562 GDLL------NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 562 ~~~~------~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++.. .|...|.+++|+|+ +.+||+|+.|+.|++||+++. ........|...|++++|+|..+.+||
T Consensus 214 ~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-------~~~~~~~~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 214 PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-------DSAQTSAVHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-------GGCEEECCCSSCEEEEEECSSSSCCEE
T ss_pred CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-------cEeEEEeccceeEEEEEEcCCCCCEEE
Confidence 7643 36788999999997 468999999999999999763 233455678999999999996567999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|+.||+|+|||+++++++..+ +|.+.|++|+|+|.++.+|+|||.|++|++||+.+......++.
T Consensus 287 sgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i~ 352 (357)
T 4g56_B 287 SISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENLIA 352 (357)
T ss_dssp EEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----------
T ss_pred EEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccccC
Confidence 9999999999999999888765 79999999999998899999999999999999987666555543
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.6e-22 Score=206.56 Aligned_cols=200 Identities=13% Similarity=0.120 Sum_probs=158.5
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~ 561 (712)
.++...+.++.|++||..++....+. .......+++|.+.+..+.| + .++. +...+.+....+|++++
T Consensus 52 ~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~--~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV-H--PTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-C--SSSSEEEEEETTSCEEEEEGGG
T ss_pred eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEE-c--CCCCEEEEECCCCeEEEEECCC
Confidence 35566788889999988654333222 12345678999999999999 3 3443 44444444445599987
Q ss_pred Cc-----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEEE
Q 005147 562 GD-----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIA 634 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~la 634 (712)
+. +.+|...|.+++|+| ++.+|++|+.|++|++||++.... .......|...+.+++|+|. ++.+|+
T Consensus 129 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC------SEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc------cceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 62 347999999999999 678999999999999999965211 11233456688999999873 467999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|+.||+|+|||+++++++.++.+|...|++++|+| ++.+|+|||.|++|++||+++++.+.++.
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 999999999999999999999999999999999998 89999999999999999999998887664
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=205.53 Aligned_cols=199 Identities=16% Similarity=0.207 Sum_probs=162.5
Q ss_pred CCCCCCcccccccCCCCC-CCCccccCCC-------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE
Q 005147 490 KPSGRPLVRHSQLSSDGR-TSKPLVNERS-------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 555 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~-------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v 555 (712)
+.+|...|+++.|++++. .++....+.. ..|...++||...+..+.| ..++...+....++.+
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL---TADGAYALSASWDKTL 89 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE---CCCCCEEEEEeCCCEE
Confidence 568999999999999764 3322222221 2345678999999999999 4455555555555555
Q ss_pred E-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC--
Q 005147 556 K-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-- 628 (712)
Q Consensus 556 ~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-- 628 (712)
+ |++.+++. .+|...|.+++|+|++.+|++|+.|++|++||++. .+.....+|...|.+++|+|.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--------~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--------QCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--------CEEEEECCCSSCEEEEEECCC--
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------CeEEEEeccCCcEEEEEEccCCC
Confidence 4 99998764 47999999999999999999999999999999863 233456689999999999984
Q ss_pred ---CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 629 ---IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 629 ---~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++..|++|+.|++|++||+++++....+.+|...|++++|+| ++.+|++|+.|++|+|||+++++.+..+-
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 244899999999999999999999999999999999999998 99999999999999999999998876653
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.8e-22 Score=210.38 Aligned_cols=196 Identities=14% Similarity=0.104 Sum_probs=147.1
Q ss_pred CCcccccccCCCCCCC--------CccccCCC-C--CCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccC
Q 005147 494 RPLVRHSQLSSDGRTS--------KPLVNERS-S--INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQ 561 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~--------~~~~~~~~-~--~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~ 561 (712)
..-|.++.|++|+.-+ .++..+.. . .....+.||.+.|..+.| +.+|...+....++. .+|++.+
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECCC
Confidence 3457888898886522 11122111 1 123456699999999999 445554455444444 4599998
Q ss_pred Ccee----cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 562 GDLL----NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++ +|.+.|.+++|++++. +|++|+.|++|+|||+++... ...+....+...+++++|+|.++.+|++|
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-----ASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-----EEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-----eeeeecceeeccceeeeecCCCCcceEEe
Confidence 7754 6999999999999874 899999999999999986321 11112234566799999999888899999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+.||+|+|||+++++++.++.+|...|++|+|+|....+|||||.|++|+|||+++++.+.
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999999999999999999999999999998334789999999999999999987653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=206.48 Aligned_cols=188 Identities=16% Similarity=0.216 Sum_probs=152.5
Q ss_pred CCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccCC
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQG 562 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~~ 562 (712)
.+...+.+..|+|||..++....+. ...+...+.+|...+..+.| ..++...+....++. .+|+++++
T Consensus 120 ~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~---spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 120 AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY---SPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE---CCCCCEEEEEcCCCeEEEEECCCC
Confidence 3445667889999998764332221 22345677888888999999 345544444444444 45999887
Q ss_pred cee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 563 DLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 563 ~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
++. +|...|.+++|+|++++|++|+.|++|++||+++. .......+|...|.+++|+| ++.+|++|+.
T Consensus 197 ~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~ 268 (321)
T 3ow8_A 197 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-------NLAGTLSGHASWVLNVAFCP-DDTHFVSSSS 268 (321)
T ss_dssp EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-------ceeEEEcCCCCceEEEEECC-CCCEEEEEeC
Confidence 654 68999999999999999999999999999999752 22234567999999999999 5899999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
||+|+|||+++++++.++.+|...|++++|+| ++.+|++|+.|++|+|||+.
T Consensus 269 D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 269 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEECC
T ss_pred CCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999998 99999999999999999963
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=205.98 Aligned_cols=198 Identities=12% Similarity=0.128 Sum_probs=160.2
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl 559 (712)
.+.+|...+.++.|++||..++....+. .......+.+|...+..+.| + .++...++...++.+ +|++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~-s--~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY-A--PSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEE-C--TTSSEEEEEETTCEEEEEET
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEE-C--CCCCEEEEEeCCCeEEEEEC
Confidence 4568888999999999998764443332 12344567889999999999 3 344444444444554 4998
Q ss_pred cCCc--------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 560 NQGD--------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 560 ~~~~--------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
.++. +.+|.+.|.++.|++++. +++++.|++|++||++++ .......+|...|.+++|+| ++.
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~ 197 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG-------QQTTTFTGHTGDVMSLSLAP-DTR 197 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECT-TSS
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC-------cEEEEEcCCCCceEEEEECC-CCC
Confidence 7642 447999999999998764 899999999999999763 22234557899999999999 689
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 632 QIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 632 ~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|++|+.||+|++||++++.++.++.+|...|++++|+| ++.+|++||.|++|++||+++++.+..+
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999999999999999999999999999999999998 9999999999999999999998877654
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=204.35 Aligned_cols=170 Identities=18% Similarity=0.189 Sum_probs=141.4
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
..+++||.+.|.++.| ..++...++...++.++ |++.++.. .+|...|.++.|+|++++|++|+.|++|++|
T Consensus 6 ~~~~~~h~~~V~~~~f---sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDF---HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EEEEEEECSCEEEEEE---CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred EEeecCCCCceEEEEE---CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 4568889999999988 34454444444555554 88887653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|+.++ .......+|...|++++|+| ++.+|++|+.||+|+|||++++ .....+.+|...|++++|+|.++.
T Consensus 83 d~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 83 NYNTG-------EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred ECCCC-------cEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 99763 22345568999999999999 5899999999999999999988 566789999999999999997889
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++||.|++|++||++++.+...+..
T Consensus 155 ~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCCccceecc
Confidence 999999999999999988777665543
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-21 Score=212.35 Aligned_cols=200 Identities=21% Similarity=0.217 Sum_probs=164.1
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~ 560 (712)
+.+|...|+++.|+|+|..++....+. .......++||.+.|..+.| + .++ ++...+.+....+|++.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~-~--~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-D--HSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE-C--TTSSEEEEEETTSCCCEEETT
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE-c--CCCCEEEEEeCCCeEEEEeCC
Confidence 457888999999999988653333222 12345688999999999999 3 344 44444444444559998
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++. +|...|.+++|+|++++|++|+.|++|++||++++ .+.....+|...|.+++|+| ++.+|++|
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~g~~l~s~ 252 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-------YCVKTFTGHREWVRMVRPNQ-DGTLIASC 252 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeCCCccEEEEEECC-CCCEEEEE
Confidence 87643 68999999999999999999999999999999763 22334568999999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC-------------------CCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD-------------------PTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~-------------------~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+.||+|++||++++.+..++.+|...|.+++|+|.. +.+|++||.|++|++||++++.++.
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999999999999999999999999831 6799999999999999999999887
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.+.
T Consensus 333 ~~~ 335 (410)
T 1vyh_C 333 TLV 335 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=211.00 Aligned_cols=191 Identities=10% Similarity=0.064 Sum_probs=149.3
Q ss_pred CCcccccccCCCCCCCCccc--cCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 494 RPLVRHSQLSSDGRTSKPLV--NER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~--~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
...+++++|||||+.+++.. .+. ...+...+ +|.++|.+++| +.+|...+...++..++|+..++.
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~f---spdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHF---STDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEE---CTTSSEEEEECSSCEEEEETTTCC
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEE---ccCCceEEeccceeEEEEEeccCc
Confidence 34578899999999864322 111 11222333 58889999999 557776666666666777777665
Q ss_pred ee------cCCCCeeEEEEcCCCCEEEEEeCCC----cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE
Q 005147 564 LL------NSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 564 ~~------~h~~~V~~i~f~~~~~~lat~~~d~----~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 633 (712)
.. +|...|.+++|+|++.++++++.|+ .+++||+..... .........+|...|++++|+| ++.+|
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~V~~~~~Sp-dg~~l 284 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT---SVLRSKQVTNRFKGITSMDVDM-KGELA 284 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE---EEEEEEEEESSCSCEEEEEECT-TSCEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee---cceeeeeecCCCCCeEeEEECC-CCCce
Confidence 32 5788999999999999999999887 688888754211 1111234567889999999999 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
|+|+.|++|+|||+++++++.++ .+|..+|++|+|+| |+.+|||||.|++|+|||+...
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999986 78999999999998 9999999999999999999643
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=212.74 Aligned_cols=201 Identities=14% Similarity=0.178 Sum_probs=163.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl 559 (712)
.+.+|...|+++.|+++|..++....+. .......+.||...+..+.| ++ ++...++...++. .+|++
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~-~p--~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI-MP--NGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEE-CS--SSSEEEEEETTSEEEEEET
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEE-eC--CCCEEEEEeCCCeEEEEEC
Confidence 3567888899999999998654433322 12334567899999999999 33 4443344444444 45999
Q ss_pred cCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC------
Q 005147 560 NQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------ 629 (712)
Q Consensus 560 ~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~------ 629 (712)
+++.+ .+|...|.++.|+|++.+|++|+.|++|++||+++. ........|...|.+++|+|..
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchh
Confidence 98764 479999999999999999999999999999999762 2233456789999999999842
Q ss_pred -------------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 630 -------------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 630 -------------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+.+|++|+.||+|++||+++++++.++.+|...|++++|+| ++.+|+|||.|++|++||+++++++
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCC
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceE
Confidence 56899999999999999999999999999999999999998 9999999999999999999998887
Q ss_pred EEEe
Q 005147 697 LHLV 700 (712)
Q Consensus 697 ~~~~ 700 (712)
..+.
T Consensus 374 ~~~~ 377 (410)
T 1vyh_C 374 KTLN 377 (410)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-21 Score=204.02 Aligned_cols=199 Identities=14% Similarity=0.203 Sum_probs=163.0
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...+.++.+++++..++....+. .......+.+|...+..+.| ..++...+....++.+. |++.
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF---SPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEE---CTTSSEEEEECTTSEEEEEETT
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEE---CCCCCEEEEEcCCCcEEEEEcC
Confidence 568888899999999987553332221 12234456788888888888 44555556666666655 9998
Q ss_pred CCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++.. ..|...|.+++|+|++++||+|+.|+.|++||++++ .......+|...|++++|+| ++.+|++|
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~sp-d~~~l~s~ 224 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-------KLLHTLEGHAMPIRSLTFSP-DSQLLVTA 224 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCCCEEEECT-TSCEEEEE
T ss_pred CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcccCCceeEEEEcC-CCCEEEEE
Confidence 7653 357889999999999999999999999999999763 12233457889999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.||+|+|||++++..+.++.+|...|++++|+| ++.+|++||.|++|++||+++++++.++.
T Consensus 225 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 225 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 9999999999999999999999999999999998 89999999999999999999999887764
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-24 Score=245.19 Aligned_cols=187 Identities=16% Similarity=0.080 Sum_probs=117.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|.++ .|+||+++++ ++++ ...+|||||| .|++|.++|+..+. +++. .|++||+.||+|||++|||
T Consensus 290 ~E~~~l~~~~~~~~i~~~~~-~~ed---~~~~yLVMEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH~~GII 361 (569)
T 4azs_A 290 NEIKFLTQPPAGFDAPAVLA-HGEN---AQSGWLVMEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALEKQGFW 361 (569)
T ss_dssp HHHHHHHSCCTTCCCCCEEE-EEEC---SSEEEEEEECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCeeEEEE-EEEE---CCEEEEEEecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHHHCCce
Confidence 456678887 7999999888 5532 3457788887 69999999966543 5543 5899999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.|||+|||+++.......
T Consensus 362 HRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~----------------------------------------------- 394 (569)
T 4azs_A 362 HDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS----------------------------------------------- 394 (569)
T ss_dssp ESCCCGGGEEECTTSCEEECCCTTEESCC---C-----------------------------------------------
T ss_pred eccCchHhEEECCCCCEEEeecccCeeCCCCCc-----------------------------------------------
Confidence 999999999999999999999999854321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|||||++.+. +..++|+||+|+++++
T Consensus 395 -------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~ 430 (569)
T 4azs_A 395 -------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFN 430 (569)
T ss_dssp -------------------------------------------CSHHHHHHHHHHHHHHC------------------CC
T ss_pred -------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccchhh
Confidence 01125799999999999764 7788999999999999
Q ss_pred hhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 265 LFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 265 Ll~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|.+++... ...+.. .+.. ......+...+...+|..||.......++|
T Consensus 431 l~~~~~~~------~~~l~~--~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 478 (569)
T 4azs_A 431 LPQPWSNW------LYAVWQ--EPVE----RWNFVLLLALFEKKAKLPSAEQQRGATEQW 478 (569)
T ss_dssp CCTTHHHH------HHHHHT--SCGG----GCSHHHHHHHHHTGGGSCCGGGSSCCHHHH
T ss_pred hccccchh------HHHhhc--CCCC----CCcHHHHHHHHhCCCCCCCCChhhhccchh
Confidence 87643211 111111 1111 112234566667777777776555444444
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=222.48 Aligned_cols=207 Identities=16% Similarity=0.179 Sum_probs=159.0
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+|...|.++.|+|||+.++...... ...+...+.||.+.+..+.| ++.....+...+.+....+|+.
T Consensus 99 ~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f-~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF-KPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE-CSSSSCEEEEEETTSCEEEEET
T ss_pred ecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEE-CCCCCeEEEEEeCCCeEEEEEC
Confidence 456777899999999998763322211 11234568899999999999 5543334555666655566998
Q ss_pred cCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 560 NQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 560 ~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
..++ +.+|.+.|.+++|+|++++||||+.|++|++||+.++..............+|...|.+++|+| ++.+|+|
T Consensus 178 ~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s 256 (611)
T 1nr0_A 178 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIAS 256 (611)
T ss_dssp TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEE
T ss_pred CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEE
Confidence 7765 3479999999999999999999999999999998763221100000011127999999999999 6999999
Q ss_pred EeCCCcEEEEECCCCcEEE-------------------------------------------EeccCCCcEEEEEEecCC
Q 005147 636 SNFEGVVQVWDVSRSQVLT-------------------------------------------EMREHERRVWSIDFSSAD 672 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~-------------------------------------------~~~~H~~~v~sv~fsp~~ 672 (712)
|+.|++|+|||+++++++. .+.+|...|++++|+| +
T Consensus 257 ~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-d 335 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-D 335 (611)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-T
T ss_pred EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-C
Confidence 9999999999999876544 3457999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.+|+|||.|++|++||+.++.....+
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeec
Confidence 999999999999999999998876543
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=206.10 Aligned_cols=193 Identities=22% Similarity=0.347 Sum_probs=152.5
Q ss_pred CCCCCC-cccccccCCCCCCCCccccCCC-------C----CCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEE
Q 005147 490 KPSGRP-LVRHSQLSSDGRTSKPLVNERS-------S----INNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVK 556 (712)
Q Consensus 490 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~-------~----~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 556 (712)
+.+|.. .+.+++|+|||..++....++. . .......||.+.+..+.| ++ ++ .+...+.+....+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~-sp--~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW-SP--CGNYLASASFDATTCI 87 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE-CT--TSSEEEEEETTSCEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE-CC--CCCEEEEEECCCcEEE
Confidence 446665 7889999999997755443331 0 012234799999999999 43 44 4455555555566
Q ss_pred EEccCCc------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 557 ADLNQGD------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 557 ~dl~~~~------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
|++..+. +.+|.+.|.+++|+|++++|++|+.|++|++||+++.. .........+|...|.+++|+| ++
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~h~~~v~~~~~~p-~~ 162 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED----EYECVSVLNSHTQDVKHVVWHP-SQ 162 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS----CEEEEEEECCCCSCEEEEEECS-SS
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC----CeEEEEEecCcCCCeEEEEECC-CC
Confidence 9887653 34799999999999999999999999999999997521 1112234557899999999999 58
Q ss_pred CEEEEEeCCCcEEEEECCCCc--EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 631 SQIASSNFEGVVQVWDVSRSQ--VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~--~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+|++|+.|++|++||++++. ++.++.+|...|++++|+| ++.+|++||.|++|+|||..
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccc
Confidence 999999999999999999875 5678999999999999998 99999999999999999963
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-20 Score=202.13 Aligned_cols=200 Identities=13% Similarity=0.107 Sum_probs=161.5
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl 559 (712)
.+.+|...|.++.|+|||..++....+.. ......+..|...+..+.| ..++...+....++.+. |++
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~---sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY---APSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEE---CTTSSEEEEESTTSEEEEEEC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEE---CCCCCEEEEeeCCCCEEEEEE
Confidence 45689999999999999986644433321 2233456778888888888 44555555555555554 877
Q ss_pred cCC----------ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-
Q 005147 560 NQG----------DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY- 628 (712)
Q Consensus 560 ~~~----------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~- 628 (712)
... .+.+|.+.|.+++|+|++..|++|+.|++|++||++++ .......+|...|.+++|+|.
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-------QLLQSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-------eEEEEEcCCCCCeEEEEEEeCC
Confidence 532 24469999999999999999999999999999999763 222345679999999999884
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 629 IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 629 ~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++++|++|+.||+|++||+++++++.++.+|...|++++|+| ++.+|++||.|++|++||++++..+..+
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 368999999999999999999999999999999999999998 8999999999999999999988776543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=208.04 Aligned_cols=200 Identities=16% Similarity=0.138 Sum_probs=155.1
Q ss_pred CCCCcccccccCCCCCCCC--------ccccC-CC--CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEc
Q 005147 492 SGRPLVRHSQLSSDGRTSK--------PLVNE-RS--SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADL 559 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~--------~~~~~-~~--~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl 559 (712)
++...|.++.|+|||..+. ++... .. ......+.+|.+.|..+.| +.++...+....++. .+|++
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~---spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV---FSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEEC
Confidence 4566788999999886431 11111 11 1233456699999999999 445554455444444 45999
Q ss_pred cCCcee----cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 560 NQGDLL----NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 560 ~~~~~~----~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
.++++. +|.+.|.+++|++++. +|++++.|++|++||+++... ........+...+++|+|+|..+.+|+
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-----~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-----ATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-----BCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-----eeeeeeccccccccchhhhhcccceEE
Confidence 987654 6899999999999875 899999999999999976322 112223456778999999997778999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|+.|+.|+|||+++++++.++.+|...|++++|+|..+.+|||||.|++|+|||+++++.+..+
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 99999999999999999999999999999999999844578999999999999999998877543
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-21 Score=206.80 Aligned_cols=189 Identities=16% Similarity=0.164 Sum_probs=151.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~ 560 (712)
..+|...+.++.|+++|..+.....+. ...+...+.||...+..++| ++..++ .+...+.+....+||++
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~-~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL-APSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-CCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE-EeCCCCCEEEEEeCCCeEEEEECC
Confidence 345777888999999987553332221 12345678899999999988 555554 44444444444559999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe---cCCCCeEEEEEcCCCCCEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l 633 (712)
++.+. +|...|.+++|+|++.+|++|+.|++|++||+++.. .+... .+...+++++|+| ++.+|
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~~~~~~~~s~-~g~~l 299 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIFGASSVDFSL-SGRLL 299 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCSCEEEEEECT-TSSEE
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCcccceeEEEEeC-CCCEE
Confidence 87754 689999999999999999999999999999997521 11122 2345789999999 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
++|+.|++|+|||+.+++.+.++.+|..+|++++|+| ++.+|+|||.|++|+||+
T Consensus 300 ~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred EEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999998 999999999999999996
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=200.29 Aligned_cols=197 Identities=16% Similarity=0.129 Sum_probs=158.9
Q ss_pred CCCCCcccccccCCCCCCCCccccCC------------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER------------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
..+...+.++.|+|+|..++....+. .......+.||.+.+..+.| ..++.+...+.+....+|+
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~l~s~s~d~~i~~wd 170 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF---LDDNQIVTSSGDTTCALWD 170 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE---EETTEEEEEETTSCEEEEE
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE---CCCCcEEEEECCCcEEEEE
Confidence 45666788999999998664332221 11223467899999998888 3456666666666666699
Q ss_pred ccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 559 LNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 559 l~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
+.++.. .+|.+.|.+++|+|++.+|++|+.|++|++||+++. .......+|...|++++|+| ++++|+
T Consensus 171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~p-~~~~l~ 242 (340)
T 1got_B 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-------MCRQTFTGHESDINAICFFP-NGNAFA 242 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------SEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------eeEEEEcCCcCCEEEEEEcC-CCCEEE
Confidence 988764 369999999999999999999999999999999752 22334567899999999999 699999
Q ss_pred EEeCCCcEEEEECCCCcEEEEecc--CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~--H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|+.||+|+|||+++++.+.++.. +...|++++|+| ++.+|++|+.|+.|++||+.++..+..+
T Consensus 243 s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 999999999999999998888763 335899999998 9999999999999999999998877654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.9e-21 Score=199.86 Aligned_cols=208 Identities=18% Similarity=0.260 Sum_probs=160.3
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC---------C---CCceeeccCCCccceecccCCCC-CCcEEEEEcCCcEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS---------S---INNLGSKEGYSEGRRSGWINPFL-EGLCKYLSFSKLRV 555 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~---~~~~~l~gh~~~~~~~~~~~~~~-~~~~~~~~~~~~~v 555 (712)
.+.+|...+++..|+|||..++....+.. . .....+.+|...+..+.| ++.. ...+...+.+....
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDW-ASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEE-CCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEE-cCCCCCCEEEEEcCCCeEE
Confidence 35689999999999999986644332221 1 234566899999999999 4543 34445555554455
Q ss_pred EEEccCCc-------------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcc--------------
Q 005147 556 KADLNQGD-------------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRD-------------- 606 (712)
Q Consensus 556 ~~dl~~~~-------------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~-------------- 606 (712)
+|++..+. +.+|.+.|.+++|+|+ +.+|++|+.|+.|++||+++.......
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 59998752 2368999999999999 999999999999999999764311100
Q ss_pred -------------------------------------c--ccceEEecCCCCeEEEEEcCCCC----CEEEEEeCCCcEE
Q 005147 607 -------------------------------------I--HYPVVEMASRSKLSSICWNSYIK----SQIASSNFEGVVQ 643 (712)
Q Consensus 607 -------------------------------------~--~~~~~~~~~~~~v~~v~~~p~~~----~~lasgs~Dg~V~ 643 (712)
. .......+|...|++++|+|. + ++|++|+.||.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~-~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS-IGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC-SSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC-CCCcceEEEEEcCCCeEE
Confidence 0 001223368899999999995 5 7999999999999
Q ss_pred EEECCCC----------------------------------------------cEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 644 VWDVSRS----------------------------------------------QVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 644 lwD~~~~----------------------------------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
+||++++ +.+..+.+|...|++++|+| ++.+|+
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~ 322 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTILS 322 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEEE
Confidence 9999875 67888899999999999998 899999
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+||.|+.|++||+.+++.+..+
T Consensus 323 s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEETTSCEEEEEECTTSCEEEE
T ss_pred EecCCCcEEEEecCcCcchhhe
Confidence 9999999999999988766544
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-20 Score=194.43 Aligned_cols=170 Identities=19% Similarity=0.294 Sum_probs=144.4
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
...++.||.+.+..+.| ++ ++...+. +.+....+|++.++.+ .+|...|.+++|+|++++|++|+.|+.|++
T Consensus 15 ~~~~~~gh~~~v~~~~~-s~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKF-SP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEEECCCSSCEEEEEE-CT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEEEcccCCcEEEEEE-CC--CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 45788899999999999 33 4444444 4444444599887654 368999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||+++. .......+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|..+|++++|+| ++.
T Consensus 92 wd~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 162 (312)
T 4ery_A 92 WDVSSG-------KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGS 162 (312)
T ss_dssp EETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSS
T ss_pred EECCCC-------cEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCC
Confidence 999752 22234567899999999999 589999999999999999999999999999999999999998 899
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++|+.|+.|++||+++++.+..+..
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEeCCCcEEEEECCCCceeeEEec
Confidence 999999999999999999988877653
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=198.81 Aligned_cols=167 Identities=14% Similarity=0.227 Sum_probs=129.0
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------e-ec-CCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------L-LN-SSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~-~~-h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
...++||.+.|..++| ++ + ++...+.+....+|++..+. + .+ |...|.+++|+|++++||+|+.|++|
T Consensus 7 ~~~~~~h~~~v~~~~~-s~--~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDF-SQ--G-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEECCSSCEEEEEE-ET--T-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeeccCCCceeeecc-CC--C-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4568899999999998 33 3 55555555555559987642 1 23 89999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC----CcEEEEeccCCCcEEEEEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR----SQVLTEMREHERRVWSIDF 668 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~----~~~~~~~~~H~~~v~sv~f 668 (712)
+|||+.................+|...|.+++|+| ++++||+|+.|++|+|||++. .+++.++.+|...|++++|
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99998642111111122234568999999999999 599999999999999999953 2578889999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 669 SSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+| ++.+|+|||.|++|++||+.++
T Consensus 162 ~p-~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 162 HP-SEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CS-SSSEEEEEETTSCEEEEEEETT
T ss_pred CC-CCCEEEEEcCCCeEEEEECCCC
Confidence 98 8999999999999999999876
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-20 Score=204.21 Aligned_cols=202 Identities=16% Similarity=0.208 Sum_probs=153.7
Q ss_pred CCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD 563 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~ 563 (712)
+...++++.|+|||..++....+. .......+.||...+..+.| + .++...+....++.++ |+++++.
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~--p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY-F--PSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-C--TTSSEEEEEETTSEEEEEETTTTE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEE-c--CCCCEEEEecCCCcEEEEECCCCe
Confidence 334588999999998764443332 12344578899999999999 3 3444444444455554 9999877
Q ss_pred ee---cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC
Q 005147 564 LL---NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 564 ~~---~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D 639 (712)
+. .+...|.+++|+| ++.+|++|+.|+.|++||++++..............+|...|++++|+| ++.+|++|+.|
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d 277 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLD 277 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCC
Confidence 54 4678899999999 8999999999999999999763211110000111247889999999999 69999999999
Q ss_pred CcEEEEECCC------------CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 640 GVVQVWDVSR------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 640 g~V~lwD~~~------------~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+|+|||+++ +.+..++.+|...|++++|+| ++.+|++||.|+.|++||+++++++..+
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 9999999975 346778899999999999998 8999999999999999999999887654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-20 Score=193.51 Aligned_cols=199 Identities=17% Similarity=0.252 Sum_probs=161.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...++++.|+|||..++....+.. ......+.+|...+..+.| ..++...++...++.+. |++.
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEE---cCCCCEEEEECCCCEEEEEECC
Confidence 4678889999999999987644333221 2234567899999999999 34555555555555554 9999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++. +|...|.+++|+|++++|++|+.|++|++||+++. ........|...|++++|+| ++.+|++|
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 167 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-------KCLKTLPAHSDPVSAVHFNR-DGSLIVSS 167 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECT-TSSEEEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------EEEEEecCCCCcEEEEEEcC-CCCEEEEE
Confidence 87643 68999999999999999999999999999999752 12234456888999999999 68999999
Q ss_pred eCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.||.|++||+++++++..+. .|...+.+++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 999999999999999888774 5677899999998 99999999999999999999998876653
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=217.48 Aligned_cols=200 Identities=15% Similarity=0.175 Sum_probs=160.0
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEE-EEcCC---cE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKY-LSFSK---LR 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~-~~~~~---~~ 554 (712)
.+.+|...|++++|||||+.++....+. .......+.+|.+.+..+.| ++ ++...+ .+.+. +.
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f-s~--dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW-DS--ESKRIAAVGEGRERFGH 130 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE-CT--TSCEEEEEECCSSCSEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE-CC--CCCEEEEEECCCCceeE
Confidence 3568888999999999999775543332 12223477899999999999 43 444333 33322 24
Q ss_pred EE-EEccC--CceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 555 VK-ADLNQ--GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 555 v~-~dl~~--~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
++ |+... +.+.+|...|.+++|+|++. .|++|+.|++|++||..+. .......+|...|++|+|+| ++
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~V~~v~fsp-dg 202 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNP-DG 202 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECT-TS
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-------eEeeeeccccCceEEEEECC-CC
Confidence 44 65432 34568999999999999987 6999999999999998642 22334567999999999999 69
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEec-------cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMR-------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~-------~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+||||+.|++|+|||+.+++++.++. +|.+.|++++|+| ++.+|+|||.|++|++||+++++++.++.
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 999999999999999999999999884 7999999999998 99999999999999999999998887664
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-20 Score=201.67 Aligned_cols=201 Identities=15% Similarity=0.152 Sum_probs=159.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC---------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS---------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
+.+|...+.++.|+|||..++....+.. ......+.||.+.+..+.| .+..+..+...+.+...
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~-~~~~~~~l~s~s~D~~i 182 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY-VPDQETRLITGSGDQTC 182 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBC-CSSSSSCEEEECTTSCE
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEE-ecCCCCEEEEECCCCcE
Confidence 3456777889999999986643322211 1123467899999999988 44445555666666656
Q ss_pred EEEEccCCce---------ecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEE
Q 005147 555 VKADLNQGDL---------LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 624 (712)
Q Consensus 555 v~~dl~~~~~---------~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 624 (712)
.+||+.++.. .+|...|.+++|++ ++++|++|+.|++|++||++... .......+|...|++|+
T Consensus 183 ~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 183 VLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS------RAVRTYHGHEGDINSVK 256 (380)
T ss_dssp EEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC------CCCEEECCCSSCCCEEE
T ss_pred EEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC------cceEEECCcCCCeEEEE
Confidence 6699887764 36899999999987 88999999999999999997421 22334568999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC-------cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER-------RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~-------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
|+| ++.+|+||+.||+|+|||+++++++..+..|.. .|++++|+| ++.+|++|+.|+.|++||+.+++.+.
T Consensus 257 ~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 257 FFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp ECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEE
T ss_pred Eec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEE
Confidence 999 699999999999999999999999998876543 489999998 99999999999999999999998887
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
.+
T Consensus 335 ~~ 336 (380)
T 3iz6_a 335 NL 336 (380)
T ss_dssp EE
T ss_pred EE
Confidence 66
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-20 Score=196.85 Aligned_cols=190 Identities=17% Similarity=0.218 Sum_probs=149.3
Q ss_pred CCCCCCccccccc-----CC-CCCCCCccccCCC---------------CCCceeeccCCCccceecccCCCCCCcEEEE
Q 005147 490 KPSGRPLVRHSQL-----SS-DGRTSKPLVNERS---------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYL 548 (712)
Q Consensus 490 ~~~~~~~~~~~~~-----~~-~g~~~~~~~~~~~---------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~ 548 (712)
+.+|...|+++.| ++ ||..++....++. ..+...+.||...+..+.| ..++...+.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~---~~~~~~l~s 93 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL---SQENCFAIS 93 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE---CSSTTEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE---CCCCCEEEE
Confidence 4578888888887 65 7765533322211 1244578999999999999 345555455
Q ss_pred EcCCcEE-EEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE---ecCCCCe
Q 005147 549 SFSKLRV-KADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE---MASRSKL 620 (712)
Q Consensus 549 ~~~~~~v-~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~---~~~~~~v 620 (712)
...++.+ +|+++++.. .+|.+.|.+++|+|++++|++|+.|++|++||+... ..... ..|...|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~--------~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE--------CKFSSAEKENHSDWV 165 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC--------EEEECCTTTSCSSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC--------ceeeeecccCCCcee
Confidence 5445555 499998764 479999999999999999999999999999998631 11111 2678899
Q ss_pred EEEEEcCCC---------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 621 SSICWNSYI---------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 621 ~~v~~~p~~---------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+++|+|.. +.+|++|+.||+|++|| .+.+...++.+|...|++++|+| ++.+|++||.|++|++||++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESS
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence 999999953 26999999999999999 55678889999999999999998 99999999999999999994
Q ss_pred C
Q 005147 692 Q 692 (712)
Q Consensus 692 ~ 692 (712)
.
T Consensus 244 ~ 244 (343)
T 2xzm_R 244 N 244 (343)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=201.82 Aligned_cols=191 Identities=17% Similarity=0.232 Sum_probs=145.5
Q ss_pred CCCCcccccccCCCCCCCCccccCC-------CCCCceeeccCCC------------------ccceecccCCCCCCcEE
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER-------SSINNLGSKEGYS------------------EGRRSGWINPFLEGLCK 546 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l~gh~~------------------~~~~~~~~~~~~~~~~~ 546 (712)
+|...|.++.|||||+.++...... .......+.+|.. .+..+.| ..++...
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---SPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE---CTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEE---CCCCCEE
Confidence 4778899999999999775432111 0111223444432 3667888 3455544
Q ss_pred EEEcCCcE-EEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 547 YLSFSKLR-VKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 547 ~~~~~~~~-v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
++...++. .+|++.+++. .+|...|.+++|+|++++|++|+.|++|++||++++. ......+...+.
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~v~ 210 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--------CSLTLSIEDGVT 210 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------EEEEEECSSCEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--------eEEEEEcCCCcE
Confidence 44444444 4599988764 3799999999999999999999999999999997632 233445677899
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-------ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-------REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-------~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+++|+|.++.+|++|+.||+|++||++++..+..+ .+|...|++++|+| ++.+|++|+.|++|++||+++..
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCC
Confidence 99999977999999999999999999999988777 67999999999998 99999999999999999998643
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=205.29 Aligned_cols=199 Identities=15% Similarity=0.273 Sum_probs=152.6
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
...+|...|+++.|++||..++....+.. ......++||.+.|..+.|..+....++...+.+....+|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 35688899999999999997755443331 11345789999999999994333355666667666666799
Q ss_pred ccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-
Q 005147 559 LNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI- 629 (712)
Q Consensus 559 l~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~- 629 (712)
++++. +.+|...|.+++|+|+ +.+|++|+.|++|++||++.... ........+|...|.+++|+|..
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ----WEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC----EEECCBTTSSSSCBCCCEECCCCC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC----cceeeeeccccCCcceEEEccccC
Confidence 98763 2369999999999997 78999999999999999975211 00112234688899999999842
Q ss_pred ---------------CCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEEecCCC----CEEEEEECCCcEEE
Q 005147 630 ---------------KSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFSSADP----TLLASGSDDGSVKL 687 (712)
Q Consensus 630 ---------------~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~fsp~~~----~~l~sgs~D~~v~l 687 (712)
+.+|++|+.|++|+|||++.+ +++.++.+|...|++|+|+| ++ .+|||||.|++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCSCCEEEEEETTCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCCCCceEEEEcCCCeEEE
Confidence 368999999999999999865 57788999999999999998 54 89999999999999
Q ss_pred EeCCC
Q 005147 688 WSINQ 692 (712)
Q Consensus 688 Wd~~~ 692 (712)
||+.+
T Consensus 243 w~~~~ 247 (316)
T 3bg1_A 243 WTCDD 247 (316)
T ss_dssp EECSS
T ss_pred EEccC
Confidence 99876
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=196.89 Aligned_cols=195 Identities=19% Similarity=0.268 Sum_probs=141.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC---------C-CCCceee-cc-CCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER---------S-SINNLGS-KE-GYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~-~~~~~~l-~g-h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
+.+|...|.++.|+++ .++....+. . ......+ .+ |.+.+..+.| ++. ..++...+.+....+|
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~-sp~-~~~las~s~D~~v~iw 85 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-RPH-TSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE-CTT-SSEEEEEETTSCEEEE
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE-CCC-CCEEEEEeCCCcEEEE
Confidence 4577788888888876 322222221 1 0111223 34 9999999999 442 2344444555555559
Q ss_pred EccC-------C----ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 558 DLNQ-------G----DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 558 dl~~-------~----~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
++.. . .+.+|.+.|.+++|+|++++||+|+.|++|++||++.... .........+|...|++++|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~---~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE---EYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---CCEEEEEECCCSSCEEEEEEC
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---CeEEEEEeccCCCceEEEEEC
Confidence 8842 1 2347999999999999999999999999999999953111 111223456799999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEecCC--CCEEEEEECCCcEEEEeCCCC
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~--~~~l~sgs~D~~v~lWd~~~~ 693 (712)
| ++.+|++|+.|++|+|||++++ +++.++.+|...|++++|+| + +.+|+|||.|++|++||++.+
T Consensus 163 p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 163 P-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp S-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEE
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCC
Confidence 9 5899999999999999999877 68899999999999999998 5 678999999999999998754
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=208.55 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=154.6
Q ss_pred CCCCcccccccCCC-CCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSD-GRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~-g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
++...|+++.|+|. +..++++..+. .....+.+.||.+.|.++.| +|.....+...+.+....+||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f-~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKF-NPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEE-CSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEE-eCCCCCEEEEEeCCCEEEEeecc
Confidence 45667999999984 43333332221 22334567899999999999 55555566555555555569998
Q ss_pred CCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 561 QGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 561 ~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++.+. .+...+++++|+|++.+|++|+.|+.|++||++.. ......+|...|++|+|+|....+|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--------eeEEEecccceEEeeeecCCCceEEE
Confidence 76532 13556889999999999999999999999998641 12234578999999999997667899
Q ss_pred EEeCCCcEEEEECCCCcEEE---EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 635 SSNFEGVVQVWDVSRSQVLT---EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~---~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|+.||+|+|||+++++... ...+|...|++|+|+| ++.+|++||.|++|+|||++++..+..+.
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 99999999999999876433 3467999999999998 99999999999999999999998877665
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-20 Score=196.61 Aligned_cols=166 Identities=16% Similarity=0.213 Sum_probs=136.1
Q ss_pred ceeeccCCC-ccceecccCCCCCCc-EEEEEcCCcEEEEEccCCce-------ecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYS-EGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGDL-------LNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~-~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~~-------~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.-++++|.+ .+..+.| ++ +|. +...+.+....+|++..+.. .+|...|.+++|+|++++||+|+.|++
T Consensus 8 ~~~~~~h~~~~v~~l~~-sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAW-NP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEECCSTTSCEEEEEE-CT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeecCCCCCcEEEEEE-CC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356789988 8999999 43 444 44444444445599887642 369999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~f 668 (712)
|+|||+... .........+|...|++++|+| ++++|++|+.|++|+|||++++ .++..+.+|...|++++|
T Consensus 85 v~iw~~~~~-----~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 85 TCIWKKNQD-----DFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEEEEECCC------EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EEEEEccCC-----CeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 999998652 1122334568999999999999 6999999999999999999876 457788999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 669 SSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+| ++.+|++|+.|++|++||++++..+
T Consensus 159 ~p-~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 159 HP-SQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp CS-SSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CC-CCCEEEEEeCCCcEEEEEecCCCEE
Confidence 98 8999999999999999999887643
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=203.10 Aligned_cols=180 Identities=16% Similarity=0.212 Sum_probs=139.8
Q ss_pred ceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.|+||.+.|..+.| ++ ++ .+...+.+....+|++.++.. .+|...|.+++|+|++++||+||.|+.|++|
T Consensus 59 ~~~l~gH~~~V~~~~~-sp--~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDW-TP--EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEECCCSSCEEEEEE-CT--TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eecccccccEEEEEEE-cC--CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 3467888888888888 33 33 333344443334488876653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-----ccCCCcEEEEEEec
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-----REHERRVWSIDFSS 670 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-----~~H~~~v~sv~fsp 670 (712)
|+.+...............+|...|.++.|+|..+..|+||+.|++|++||+++++++..+ .+|...|.+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 9976322212222223456899999999999976778999999999999999999999888 68999999999998
Q ss_pred CCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 671 ADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 671 ~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.++.+|+|||.|++|++||++........+.+|
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 789999999999999999998543333444444
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-19 Score=188.93 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=140.4
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC---------ceecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG---------DLLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~---------~~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.-+|+||.+.|..+.| ++....++...+.+....+|++... .+.+|...|.+++|+|++.+|++|+.|++
T Consensus 10 ~~~l~gH~~~V~~l~~-~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 10 RGTLEGHNGWVTSLAT-SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEECCCSSCEEEEEE-CSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEccccceEEEEEc-cCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 3478899999999999 4444456666665555555988632 24589999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
|+|||+.++ .......+|...|.+++|+| ++.+|++|+.|++|++||++ ++++.++.+|...|.++.|+|.
T Consensus 89 v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 89 LRLWDVATG-------ETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEETTTT-------EEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEECCCC-------CeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 999999763 22334568999999999999 58999999999999999996 6688899999999999999983
Q ss_pred -----CCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 672 -----DPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 672 -----~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++.++++|+.|++|++||+++++....+.
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 193 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 193 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeec
Confidence 34589999999999999999887765543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=194.40 Aligned_cols=200 Identities=16% Similarity=0.241 Sum_probs=159.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
.+.+|...+++..|++||..++....+. .......+.+|.+.+..+.|..+.....+...+.+....+|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 4567889999999999998764443332 122345788999999999993222244555555554455599
Q ss_pred ccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC--
Q 005147 559 LNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-- 628 (712)
Q Consensus 559 l~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-- 628 (712)
+.++. +.+|...|.+++|+|+ +.+|++++.|+.|++||+++. ..........|...|++++|+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN-----GTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT-----SCCCEEEEECCTTCEEEEEECCCC-
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC-----CceeeEEecCCCCceEEEEEcCccc
Confidence 98875 2258999999999999 999999999999999999762 11233456689999999999995
Q ss_pred ----------CCCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCcEEEEEEecCC---CCEEEEEECCCcEEEEeCC
Q 005147 629 ----------IKSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSAD---PTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 629 ----------~~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~---~~~l~sgs~D~~v~lWd~~ 691 (712)
++.+|++|+.||.|++||++++. ++..+.+|...|++++|+| + +.+|++|+.|+.|++||++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEEEeCC
Confidence 58999999999999999998764 5678889999999999998 6 8999999999999999999
Q ss_pred CCc
Q 005147 692 QAI 694 (712)
Q Consensus 692 ~~~ 694 (712)
++.
T Consensus 240 ~~~ 242 (379)
T 3jrp_A 240 NEQ 242 (379)
T ss_dssp STT
T ss_pred CCC
Confidence 864
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-19 Score=186.81 Aligned_cols=165 Identities=15% Similarity=0.154 Sum_probs=131.3
Q ss_pred eeeccCCCccceecccCCCCCCcE-EEEEcCCcEEEEEccCC------ceecCCCCeeEEEEcC--CCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLC-KYLSFSKLRVKADLNQG------DLLNSSNLVCSLSFDR--DGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~dl~~~------~~~~h~~~V~~i~f~~--~~~~lat~~~d~~I 592 (712)
+.+.||.+.|..+.| ..+|.. ...+.+....+|++..+ .+.+|.+.|.+++|++ ++++||||+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~---s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVM---DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEE---CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 567899999999999 344544 44444444455998642 3458999999999986 48999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc--EEEEeccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ--VLTEMREHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~--~~~~~~~H~~~v~sv~fs 669 (712)
+|||++++. .........|...|.+++|+|.. +.+|++|+.||+|++||++++. ....+.+|...|++++|+
T Consensus 80 ~iWd~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 80 MIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp EEEEBSSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred EEEEcCCCc-----eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 999997531 11223445789999999999942 7899999999999999998763 246788999999999999
Q ss_pred cC------------CCCEEEEEECCCcEEEEeCCCCc
Q 005147 670 SA------------DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 670 p~------------~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|. ++.+||+||.|++|+|||++++.
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 83 25799999999999999998766
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=206.06 Aligned_cols=186 Identities=23% Similarity=0.307 Sum_probs=150.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC-------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER-------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~ 561 (712)
..+|...++++.|+|||..++....++ .......+.+|...+.++.| ..++...+....++.+. |++..
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~---s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAF---SPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETTS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEE---CCCCCEEEEEcCCCEEEEEECCC
Confidence 346777899999999999774433222 22334577899999999999 34444444444455544 88653
Q ss_pred C---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 562 G---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 562 ~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
. .+.+|...|.+++|+|++.+||+++.|++|++||... .......+|...|++|+|+| ++.+||+|+.
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--------~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~ 528 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSP-DGQTIASASD 528 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECT-TSSCEEEEET
T ss_pred CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--------CEEEEEeCCCCCEEEEEEcC-CCCEEEEEEC
Confidence 3 2447999999999999999999999999999999642 22345568999999999999 6999999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
||.|+|||. +++++.++.+|...|++++|+| |+.+|+|||.|++|++||
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred cCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEeC
Confidence 999999995 6889999999999999999998 999999999999999998
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=211.32 Aligned_cols=203 Identities=18% Similarity=0.228 Sum_probs=159.7
Q ss_pred CCCCCCCcccccccCCCCCC-CCccccCC---------C----CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 489 VKPSGRPLVRHSQLSSDGRT-SKPLVNER---------S----SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~---------~----~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
.+.+|...|+++.|++++.. ++....+. . ......+.||...+..+.| +.++...++...++.
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~---s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL---SSDGQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE---CCCCCEEEEEeCCCc
Confidence 46689999999999988653 22222221 1 1223468899999999999 445555555555555
Q ss_pred EE-EEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 555 VK-ADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 555 v~-~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
++ |++.++. +.+|...|.+++|+|++.+|+|||.|++|+|||...... ........+|...|+|++|+|..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK----YTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE----EEECSSTTSCSSCEEEEEECSCS
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc----eeeccCCCCCCCcEEEEEEeCCC
Confidence 54 9998775 347999999999999999999999999999999854110 00000113688899999999953
Q ss_pred -CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 630 -KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 630 -~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
...|++|+.||+|+|||++++++..++.+|...|++++|+| ++.+|+|||.|++|+|||+++++.+..+
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 25899999999999999999999999999999999999998 9999999999999999999999887654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-20 Score=200.14 Aligned_cols=193 Identities=13% Similarity=0.058 Sum_probs=145.6
Q ss_pred CCcccccccCCCCCCCCccccCCC--------C--CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNERS--------S--INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~~--------~--~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
...++++.|+|||..++....+.. . .+...+.+|.+.+..+.| ++. ...+...+.+....+|++.++.
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~-s~~-~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDW-APK-SNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEE-CTT-TCCEEEEETTSSEEEC------
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEE-eCC-CCEEEEEeCCCeEEEEEcCCCC
Confidence 446889999999987644433321 1 345678899999999999 332 2345555555555569998765
Q ss_pred -------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEE
Q 005147 564 -------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 564 -------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~las 635 (712)
+.+|...|.+++|+|++++|++|+.|+.|++||+++... ......... |...|++++|+| ++.+|++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~ 163 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND----WWVSKHLKRPLRSTILSLDWHP-NNVLLAA 163 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---------CCCCEEECSSCCSCEEEEEECT-TSSEEEE
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc----ceeeeEeecccCCCeEEEEEcC-CCCEEEE
Confidence 336899999999999999999999999999999976321 111223334 899999999999 6899999
Q ss_pred EeCCCcEEEEECC------------------CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 636 SNFEGVVQVWDVS------------------RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 636 gs~Dg~V~lwD~~------------------~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|+.||+|++||++ .++++.++ +|...|++++|+| ++.+|++|+.|++|++||++++..
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999985 45677778 9999999999998 999999999999999999999876
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-18 Score=183.50 Aligned_cols=193 Identities=17% Similarity=0.156 Sum_probs=154.7
Q ss_pred cccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce--
Q 005147 496 LVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL-- 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~-- 564 (712)
.+.+..|+|||+.++...... .....+...+|...+..+.| ..++...+... ++.+. |++.++..
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTI---SNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEE---CSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEE---ecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 467789999999763322111 11233456699999999999 34555555555 45544 99976531
Q ss_pred --e-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 565 --L-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 565 --~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
. +|...|.+++|+|++++|++++.|+.|++||+.+.. .........|...|.+++|+| ++++|++++
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 160 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISP-DSKVCFSCC 160 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECT-TSSEEEEEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-----cceeeecccCCCceEEEEECC-CCCEEEEEe
Confidence 1 688999999999999999999999999999997621 112334567888999999999 689999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|++||+++++.+..+..|...|++++|+| ++.+|++++.|+.|++||+++++.+..+
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeee
Confidence 999999999999999999999999999999998 8999999999999999999999887665
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=205.82 Aligned_cols=161 Identities=12% Similarity=0.062 Sum_probs=132.5
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----eecCCCCeeEE--EEcCCC-CEEEEEeCCCc
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----LLNSSNLVCSL--SFDRDG-ELFAAAGVNKK 591 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----~~~h~~~V~~i--~f~~~~-~~lat~~~d~~ 591 (712)
|...+.+|.+.+.+++| ++ ++.+...+.+....+||++++. +.+|.+.|.+| .|+|++ .+|||||.|++
T Consensus 258 p~~~l~~h~~~v~sv~~-s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 258 PSLTLSLADSLITTFDF-LS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp CSEEECCTTTCEEEEEE-SS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred ceEEEEcCCCCEEEEEe-cC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 45688999999999999 33 4565555555555559998653 44799999999 578887 89999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCC--CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
|+|||+++.. +.....+|. ..|.+|+|+| ++..|++++.|++|+|||++++.++.++.+|.+.|++|+|+
T Consensus 335 vklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 335 FYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp EEEECGGGHH-------HHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred EEEEECCCCC-------cccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 9999997632 122223343 3588999999 58899999999999999999999989999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCC
Q 005147 670 SADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
| ++.+|+|||.|++|++||+..
T Consensus 407 p-~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 407 R-LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp S-SCCBCEEEETTTEEECCBSCS
T ss_pred C-CCCeEEEEECCCEEEEEechH
Confidence 8 899999999999999999754
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.7e-19 Score=191.19 Aligned_cols=201 Identities=14% Similarity=0.156 Sum_probs=155.4
Q ss_pred CCCCCCCcccccccCCCC-CCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDG-RTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g-~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
...+|...++++.|+++| ..++....+. .....+.+.+|.+.+..+.| ++.....+...+.+....+|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKF-NQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEE-ETTEEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEe-CCCCCCEEEEEeCCCEEEEE
Confidence 356788899999999999 5443332221 12223344589999999999 44333444444444444559
Q ss_pred EccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 558 DLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 558 dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
++...... +|...|.+++|+|++.+|++|+.|+.|++||++. ........|...|.+++|+|. +.
T Consensus 147 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--------~~~~~~~~h~~~v~~~~~~~~-~~ 217 (383)
T 3ei3_B 147 DFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--------HEIFKEKLHKAKVTHAEFNPR-CD 217 (383)
T ss_dssp ETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--------CEEEEEECSSSCEEEEEECSS-CT
T ss_pred ECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--------CEEEEeccCCCcEEEEEECCC-CC
Confidence 99864432 2458899999999999999999999999999842 223445679999999999995 55
Q ss_pred -EEEEEeCCCcEEEEECCC----CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 632 -QIASSNFEGVVQVWDVSR----SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 632 -~lasgs~Dg~V~lwD~~~----~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|++|+.||+|++||+++ +.++..+ +|...|++++|+|.++.+|++|+.|+.|++||++++..+..+.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999999999999998 6677777 6999999999997689999999999999999999988765554
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=182.69 Aligned_cols=176 Identities=19% Similarity=0.281 Sum_probs=136.0
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---------eecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---------LLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
+|+||.+.|..++| +|....++...+.|....+|++..+. +.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 33 tL~GH~~~V~~v~~-sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 33 TLKGHNGWVTQIAT-TPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EECCCSSCEEEEEE-CTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EECCccCCEEEEEE-eCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 57888888888888 55444455555555555558876432 346888899999999999999999999999
Q ss_pred EEEcCCccccC------------------------------------cccccceEEecCCCCeEEEEEcCCC-CCEEEEE
Q 005147 594 VFECDAIINEN------------------------------------RDIHYPVVEMASRSKLSSICWNSYI-KSQIASS 636 (712)
Q Consensus 594 iwD~~~~~~~~------------------------------------~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasg 636 (712)
+|+........ ..........+|...+.+++|++.. ..+++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 98887521000 0000011223577889999998753 3478999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|++|++||+++++++..+.+|.+.|++++|+| ++.+|++|+.|++|++||+++++.+..+.
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeec
Confidence 9999999999999999999999999999999998 99999999999999999999998876654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=187.10 Aligned_cols=181 Identities=14% Similarity=0.136 Sum_probs=129.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCC-CCCcEEEE-EcCCcEEEEEccCCcee--
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPF-LEGLCKYL-SFSKLRVKADLNQGDLL-- 565 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~-~~~~~~~~-~~~~~~v~~dl~~~~~~-- 565 (712)
..+|.+.|+...+++||+.. ..+.+|...+..+.| ++. .++...+. +.|....+||+++|+++
T Consensus 152 ~~g~d~~V~~~~~s~dG~~~------------~s~~~~~~~v~~l~f-s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t 218 (356)
T 2w18_A 152 GTLSDQQVEVMTFAEDGGGK------------ENQFLMPPEETILTF-AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK 218 (356)
T ss_dssp SSSTTCEEEEEEECTTSCEE------------EEEEECCCSSCEEEE-EEEETSTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccCCCCcEEEEEECCCCcee------------eeeccCCCceeeEEe-eccCCCCceEEEecCCCcEEEEECCCCcEEEE
Confidence 35688899999999998865 356688888888888 331 23444444 44444445888887654
Q ss_pred --cC---CCCeeEEEEcCCCCEE------------EEEeCCCcEEEEEcCCccccCcccccceE-EecCCCCeEEEEEcC
Q 005147 566 --NS---SNLVCSLSFDRDGELF------------AAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNS 627 (712)
Q Consensus 566 --~h---~~~V~~i~f~~~~~~l------------at~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p 627 (712)
+| ...|.+++|+|+|.++ ++|+.|++|++||..++...... .+. ..+|...+.+.+++
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~---~~~~p~Gh~~~~lsg~~s- 294 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM---LYCLPPGQAGRFLEGDVK- 294 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE---EECCCTTCCCCEEEEEEE-
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE---EeeccCCCcceeEccccC-
Confidence 23 3467888999999876 67889999999999764221100 000 12455555555554
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEE-EEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW-SIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~-sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
+.++|+|+.||+|+|||+.+++++.++.+|...+. +++|+| |+++|+|||.|++|+|||+
T Consensus 295 --g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 --DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred --CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 67899999999999999999999999999988766 589998 9999999999999999996
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=186.47 Aligned_cols=200 Identities=13% Similarity=0.099 Sum_probs=157.9
Q ss_pred CCCcccccccCCCCCCCCccccCCC--------CC--CceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccC
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS--------SI--NNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQ 561 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~--------~~--~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~ 561 (712)
|...++++.|+|||..+++...+.. .. ....+.+|...+..+.| ++ ++...+. +.+....+|++.+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW-AP--DSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE-ET--TTTEEEEEETTSCEEEEEEET
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEE-eC--CCCEEEEEcCCCeEEEEECCC
Confidence 5667889999999987644422221 11 45678899999999999 33 4444444 4444444599987
Q ss_pred Cce------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 562 GDL------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 562 ~~~------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+++ ..|...|.+++|+|++++|++|+.|+.|++||++.... ..........|...|++++|+| ++++|++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~---~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 159 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND---WWVCKHIKKPIRSTVLSLDWHP-NSVLLAA 159 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT---EEEEEEECTTCCSCEEEEEECT-TSSEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc---ceeeeeeecccCCCeeEEEEcC-CCCEEEE
Confidence 752 35899999999999999999999999999999975211 0011122356789999999999 6899999
Q ss_pred EeCCCcEEEEEC------------------CCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 636 SNFEGVVQVWDV------------------SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 636 gs~Dg~V~lwD~------------------~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
|+.||.|++||+ .+++++..+.+|...|++++|+| ++.+|++|+.|+.|++||+++++++.
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeE
Confidence 999999999995 46789999999999999999998 89999999999999999999998887
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.+.
T Consensus 239 ~~~ 241 (372)
T 1k8k_C 239 TLA 241 (372)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=183.69 Aligned_cols=164 Identities=13% Similarity=0.257 Sum_probs=130.2
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
.....+.+|...+..+.| ++.....+.+. +.+....+|+++++.+. +|.+.|.+++|+|++++|++|+.|++|+
T Consensus 162 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRF-SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAM 240 (340)
T ss_dssp EEEECSSSCSSCEEEEEE-CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eEEEEeccccCcccceEE-ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 344567789999888888 44444444444 44444445999887643 6899999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---------ccCCCcEE
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---------REHERRVW 664 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---------~~H~~~v~ 664 (712)
+||+++. .++....+...|.+++|+| ...+++++.|+.|+|||++++..+..+ .+|...|+
T Consensus 241 iwd~~~~--------~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 241 LWDLNEG--------KHLYTLDGGDIINALCFSP--NRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp EEETTTT--------EEEEEEECSSCEEEEEECS--SSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred EEEeccC--------ceeeeecCCceEEeeecCC--CCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence 9999762 2344556678899999998 346677778999999999998777665 36889999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+++|+| ++++|+|||.||+|+|||+++|.
T Consensus 311 ~l~~s~-dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSA-DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECC-CCCEEEEEeCCCEEEEEeCCCcC
Confidence 999998 99999999999999999999885
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=188.75 Aligned_cols=203 Identities=17% Similarity=0.217 Sum_probs=147.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+|||..+++...+. .......+.+|...+..+.| + ..++...+.+....+|+...
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~-~---~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW-N---SYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-E---TTEEEEEETTSEEEEEETTS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee-C---CCEEEEEeCCCceeEeeecc
Confidence 446777899999999999775544332 12345678899999988887 2 23444444444444588875
Q ss_pred Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc-----------------------------
Q 005147 562 GD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI----------------------------- 607 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~----------------------------- 607 (712)
.. +.+|...++.+.|+|++.++++++.|+.|++||..+........
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 32 45799999999999999999999999999999987632110000
Q ss_pred ------------ccceEEecCCCCeEEEEEcCCCCCEEEEEe--CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 608 ------------HYPVVEMASRSKLSSICWNSYIKSQIASSN--FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 608 ------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
........+...+.++.|+|. +..+++++ .||.|+|||+.+++++.++.+|.++|++|+|+| ++
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~-~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-dg 376 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DG 376 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEEETT-TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS
T ss_pred CCCEEEEEeCCccccceeeccccceeeeeecCC-CCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CC
Confidence 001111223455667777774 55555543 688899999999999999999999999999998 99
Q ss_pred CEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 674 TLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.+|||||.|++|+|||+....+...
T Consensus 377 ~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp SCEEEEETTTEEEEECCSCSSCC--
T ss_pred CEEEEEecCCeEEEEECCCCCccch
Confidence 9999999999999999987665543
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-18 Score=180.43 Aligned_cols=206 Identities=14% Similarity=0.098 Sum_probs=162.4
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
+.+|...+++..|+|||..+++...+. ...+...+.+|.+.+..+.| ++ ++...+....++. .+|++.
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV-DC--FTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE-CT--TSSEEEEEETTTEEEEEETT
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE-cC--CCCEEEEEeCCCeEEEEECC
Confidence 557888899999999998664433222 23455678899999999999 33 4444444444555 449999
Q ss_pred CCcee---cCCCCeeEEEEcCCCCEEEEEeCC-----CcEEEEEcCCccccCcc----cccceEEecCCC--CeEEEEEc
Q 005147 561 QGDLL---NSSNLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRD----IHYPVVEMASRS--KLSSICWN 626 (712)
Q Consensus 561 ~~~~~---~h~~~V~~i~f~~~~~~lat~~~d-----~~I~iwD~~~~~~~~~~----~~~~~~~~~~~~--~v~~v~~~ 626 (712)
+++.. .|...|.+++|+|++.+|++++.+ +.|++||+......... .........|.. .+.+++|+
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 87654 478999999999999999999999 99999999763221110 011223344555 89999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
| ++++|++|+.||.|.+||+++ ++.+..+..|...|.+++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 185 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 185 T-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp G-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred C-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeec
Confidence 9 689999999999999999999 789999999999999999998 99999999999999999999998887664
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=205.84 Aligned_cols=199 Identities=16% Similarity=0.216 Sum_probs=157.9
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~ 557 (712)
...+|...+++..|+|||..+++...+. .......+.+|.+.|..+.| ++..++ .+...+.+....+|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~-s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW-AHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEE-CCTTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEe-cCCCCCCEEEEEeCCCeEEEE
Confidence 3568899999999999998764443322 12344578899999999999 443334 44444444444559
Q ss_pred EccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-
Q 005147 558 DLNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY- 628 (712)
Q Consensus 558 dl~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~- 628 (712)
++.++. +.+|...|.+++|+|+ +++|++|+.|++|++||+++.. .........|...|++++|+|.
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-----~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-----CCCCEEEECCSSCEEEEEECCCC
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-----CcceeEeecCCCceEEEEecCcc
Confidence 998875 2358999999999999 9999999999999999997631 2234556789999999999995
Q ss_pred -----------CCCEEEEEeCCCcEEEEECCCC----cEEEEeccCCCcEEEEEEecCC---CCEEEEEECCCcEEEEeC
Q 005147 629 -----------IKSQIASSNFEGVVQVWDVSRS----QVLTEMREHERRVWSIDFSSAD---PTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 629 -----------~~~~lasgs~Dg~V~lwD~~~~----~~~~~~~~H~~~v~sv~fsp~~---~~~l~sgs~D~~v~lWd~ 690 (712)
++.+|++|+.||+|++||++++ .++.++.+|...|++++|+| + +.+|++|+.||+|++||+
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCEEEEEecCCEEEEecC
Confidence 4889999999999999999987 56778899999999999998 6 899999999999999999
Q ss_pred CCCc
Q 005147 691 NQAI 694 (712)
Q Consensus 691 ~~~~ 694 (712)
+++.
T Consensus 237 ~~~~ 240 (753)
T 3jro_A 237 DNEQ 240 (753)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 8864
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=194.96 Aligned_cols=168 Identities=14% Similarity=0.151 Sum_probs=135.9
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVF 595 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iw 595 (712)
...+|...|..++| +|..+.++++.+.+....+|++.+++ +.+|.+.|++|+|+| ++++|+|||.|++|+||
T Consensus 114 ~~~~~~~~V~~l~~-~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAW-HPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEE-CSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEE-eCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 45688889999999 88777787777777666779997654 237999999999998 78999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
|+++... ........+...+.+++|+| ++.+|++|+.||.|++||++ ++.+.++.+|...|++|+|+|....+
T Consensus 193 d~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 193 DFKGNIL-----RVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp ETTSCEE-----EEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred eccCCce-----eEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceE
Confidence 9965210 10011122345678999999 69999999999999999986 46677899999999999999955679
Q ss_pred EEEEECCCcEEEEeCCCCcEEEE
Q 005147 676 LASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
|++||.|++|+|||++++.....
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSC
T ss_pred EEEecCcceeeEEecccccccce
Confidence 99999999999999988765433
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-18 Score=183.85 Aligned_cols=163 Identities=15% Similarity=0.197 Sum_probs=129.1
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
+..+|.+.+|+.+..... ......+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.+...............+|.
T Consensus 53 ~~~~g~i~v~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRV-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CSSSCCEEEEETTCCEEC-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EcCCCEEEEEECccCCCC-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 445555555555332211 001123557999999999999 899999999999999999986422111112344566899
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe--ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM--REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~--~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
..|++++|+|...++|++|+.||+|+|||+++++++.++ .+|...|++++|+| ++.+|++|+.|+.|++||+++++.
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCce
Confidence 999999999954479999999999999999999999999 88999999999998 999999999999999999999998
Q ss_pred EEEEecee
Q 005147 696 LLHLVDVS 703 (712)
Q Consensus 696 v~~~~~~~ 703 (712)
+..+...+
T Consensus 211 ~~~~~~~~ 218 (402)
T 2aq5_A 211 VAEKDRPH 218 (402)
T ss_dssp EEEEECSS
T ss_pred eeeeccCC
Confidence 87763333
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-18 Score=186.23 Aligned_cols=197 Identities=14% Similarity=0.103 Sum_probs=145.1
Q ss_pred cccCCCCCCCCccc-cCCCCCCceee-ccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC---Cc-----ee-cC
Q 005147 500 SQLSSDGRTSKPLV-NERSSINNLGS-KEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ---GD-----LL-NS 567 (712)
Q Consensus 500 ~~~~~~g~~~~~~~-~~~~~~~~~~l-~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~---~~-----~~-~h 567 (712)
..|+++|..++... -.........+ ++|.+.+..+.| ++. ++...++...++.+ +|++.. +. +. +|
T Consensus 33 ~~f~~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~-s~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h 110 (437)
T 3gre_A 33 KEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAV-SPG-ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDC 110 (437)
T ss_dssp GGGCCCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEE-ECS-SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEEC
T ss_pred hhcCCccccccccccccccceEEeeeccCCCCceEEEEE-CCC-CCCEEEEecCCceEEEeECcccccCcccceeeeccC
Confidence 44566666553221 01122344566 899999999999 332 44444444455555 499876 32 22 68
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC---ccccCcccccceEEe---c--CCCCeEEEE--EcCCCCCEEEEEe
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDA---IINENRDIHYPVVEM---A--SRSKLSSIC--WNSYIKSQIASSN 637 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~---~~~~~~~~~~~~~~~---~--~~~~v~~v~--~~p~~~~~lasgs 637 (712)
.+.|.+++|+|++++|++|+.|++|++||+.. +..........+... . +...+.++. ++| ++.+|++|+
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 189 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALT 189 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEe
Confidence 99999999999999999999999999999952 111000000111111 1 566777877 556 588999999
Q ss_pred CCCcEEEEECCCCcEEEEecc--CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~--H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++.++.+ |...|++++|+| ++.+|++|+.|++|++||+++++++..+.
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEB
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEe
Confidence 999999999999999999998 899999999998 89999999999999999999998887764
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=194.40 Aligned_cols=196 Identities=23% Similarity=0.280 Sum_probs=154.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~ 561 (712)
..++...+.++.|+|||..++....+ ........+.+|...+.++.| ..++...+....++.+ +|+...
T Consensus 340 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~---s~dg~~l~~~~~d~~v~~~~~~~ 416 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAF---SPDGQTIASASDDKTVKLWNRNG 416 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSEEEEECTTC
T ss_pred EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEE---CCCCCEEEEEeCCCEEEEEeCCC
Confidence 45667788899999999876433222 122334567899999999998 3444444444444554 488543
Q ss_pred C---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 562 G---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 562 ~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
. .+.+|...|.+++|+|++++|++++.|++|++||... .......+|...|++++|+| ++.+||+++.
T Consensus 417 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--------~~~~~~~~~~~~v~~~~~sp-d~~~las~~~ 487 (577)
T 2ymu_A 417 QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSP-DGQTIASASD 487 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECT-TSCEEEEEET
T ss_pred CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--------CEEEEEcCCCCCEEEEEEcC-CCCEEEEEeC
Confidence 2 2447999999999999999999999999999999743 22345568999999999999 6999999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++|+|||. +++++.++.+|...|++|+|+| ++.+||+|+.|+.|+|||. +++++..+.
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 999999994 7889999999999999999998 9999999999999999996 567665543
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.5e-18 Score=175.88 Aligned_cols=199 Identities=17% Similarity=0.203 Sum_probs=146.1
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+++|..++....+. .......+.+|...+....+ ....+...+.+.....|+...
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE----ETTEEEEEETTSEEEEEETTS
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec----CCCEEEEEecCCceEeeecCC
Confidence 456777899999999999764443332 12344567899888765554 223444444444444477665
Q ss_pred Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc------------------------------
Q 005147 562 GD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD------------------------------ 606 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~------------------------------ 606 (712)
+. +.+|...+.++.|++++++|++++.|++|++||++++......
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 139 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 42 4479999999999999999999999999999999863211000
Q ss_pred -----------cccceEEecCCCCeEEEEEcCCCCCEEEEE--eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 607 -----------IHYPVVEMASRSKLSSICWNSYIKSQIASS--NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 607 -----------~~~~~~~~~~~~~v~~v~~~p~~~~~lasg--s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
.........+...+.+++|+|. +..++++ +.||.|+|||+++++++.++.+|.+.|++|+|+| ++
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-dg 296 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DG 296 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEEETT-TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS
T ss_pred CCCEEEEEecccccccccccceeeeeeeeeccc-ccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CC
Confidence 0001122334566788899985 5555554 4799999999999999999999999999999998 99
Q ss_pred CEEEEEECCCcEEEEeCCCCc
Q 005147 674 TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.+|||||.|++|+|||+.+..
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp SCEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEecCCeEEEEECCCCC
Confidence 999999999999999998654
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=186.85 Aligned_cols=203 Identities=17% Similarity=0.233 Sum_probs=159.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC------------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER------------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
...+...+++..|++||..++....+. ...+...+.+|.+.+..+.| ++....++...+.+....+|
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF-NAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE-CSSSTTBEEEECSSSCEEBC
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE-cCCCCCEEEEEcCCCeEEEE
Confidence 345677899999999998764332221 11355678899999999999 44434455555444444459
Q ss_pred EccCCc-------------eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEec------CC
Q 005147 558 DLNQGD-------------LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA------SR 617 (712)
Q Consensus 558 dl~~~~-------------~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~------~~ 617 (712)
++.++. ..+|...|.+++|+|+ +.+|++|+.|+.|++||+++... ...... |.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-------VIHLSYTSPNSGIK 214 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-------EEEECCCCCSSCCC
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-------ceEEeccccccccC
Confidence 998765 1358899999999998 78999999999999999976311 111222 27
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCC---cEEEEECCCC-cEEEEec-cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 618 SKLSSICWNSYIKSQIASSNFEG---VVQVWDVSRS-QVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg---~V~lwD~~~~-~~~~~~~-~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
..|++++|+|....+|++++.|+ .|++||++++ .++..+. +|...|++++|+|.++.+|++|+.|++|++||+++
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 88999999996557999999999 9999999997 6788888 99999999999987899999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++++..+.
T Consensus 295 ~~~~~~~~ 302 (416)
T 2pm9_A 295 AEQLSQFP 302 (416)
T ss_dssp CCEEEEEE
T ss_pred Cccceeec
Confidence 98887664
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-19 Score=192.43 Aligned_cols=203 Identities=12% Similarity=0.097 Sum_probs=151.8
Q ss_pred CCCcccccccCCCCCCCCccccCCC---------C----------CCceeeccCC------------CccceecccCCCC
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS---------S----------INNLGSKEGY------------SEGRRSGWINPFL 541 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~---------~----------~~~~~l~gh~------------~~~~~~~~~~~~~ 541 (712)
+...|+++.|+|||..++....+.. . .....+.||. +.+..+.| ++..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~-~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW-LPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-CCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE-cCCC
Confidence 3457899999999987644432221 0 1255788998 88999999 4433
Q ss_pred C-CcEEEEEcCCcEEEEEccCCce--------------------------------------------ecCCCCeeEEEE
Q 005147 542 E-GLCKYLSFSKLRVKADLNQGDL--------------------------------------------LNSSNLVCSLSF 576 (712)
Q Consensus 542 ~-~~~~~~~~~~~~v~~dl~~~~~--------------------------------------------~~h~~~V~~i~f 576 (712)
+ ..+...+.+....+|++..+.. .+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2 4555666655555699876332 469999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCccccCcc-cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE---
Q 005147 577 DRDGELFAAAGVNKKIKVFECDAIINENRD-IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV--- 652 (712)
Q Consensus 577 ~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~--- 652 (712)
+|++++|++| .|++|++||+++....... ...+....+|...|++++|+|...++|++|+.||+|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999742110000 0000123478899999999995339999999999999999999887
Q ss_pred -EEEeccCCC------------cEEEEEEecCCCCEEEEEECCCcEEEEeCCC-CcEEEEE
Q 005147 653 -LTEMREHER------------RVWSIDFSSADPTLLASGSDDGSVKLWSINQ-AILLLHL 699 (712)
Q Consensus 653 -~~~~~~H~~------------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~v~~~ 699 (712)
+..+.+|.. .|++++|+| ++.+|++|+. +.|++||+++ ++++..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred eeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 789998887 999999998 9999999999 9999999997 6665444
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-17 Score=178.01 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=130.1
Q ss_pred CceeeccCCCccceeccc-CC--CCCCcEEEE-EcCCcEEEEEccCC-----------ceecCCCCeeEEEEcCCCCEEE
Q 005147 520 NNLGSKEGYSEGRRSGWI-NP--FLEGLCKYL-SFSKLRVKADLNQG-----------DLLNSSNLVCSLSFDRDGELFA 584 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~-~~--~~~~~~~~~-~~~~~~v~~dl~~~-----------~~~~h~~~V~~i~f~~~~~~la 584 (712)
....|+||.+.|..+.|. +. ..++.+.++ +.+....+|++..+ .+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 345789999999999871 11 124444444 44444455998643 2457999999999999999999
Q ss_pred EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec---cCCC
Q 005147 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR---EHER 661 (712)
Q Consensus 585 t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~---~H~~ 661 (712)
+|+.|++|++||++++ .......+|...|.+++|+| ++.+|++|+.|++|++||+.. .....+. +|..
T Consensus 93 s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSD 163 (343)
T ss_dssp EEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSS
T ss_pred EEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCc
Confidence 9999999999999763 22234568999999999999 699999999999999999984 4444443 7999
Q ss_pred cEEEEEEecCCC----------CEEEEEECCCcEEEEeCCCCcEEE
Q 005147 662 RVWSIDFSSADP----------TLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 662 ~v~sv~fsp~~~----------~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
.|.+++|+| ++ .+|++|+.|++|++||.+ +....
T Consensus 164 ~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~ 207 (343)
T 2xzm_R 164 WVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY 207 (343)
T ss_dssp CEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE
T ss_pred eeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE
Confidence 999999998 54 799999999999999954 44443
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.5e-19 Score=194.38 Aligned_cols=178 Identities=16% Similarity=0.133 Sum_probs=134.0
Q ss_pred CcccccccCCCCCCCCccccCCCC---CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee--cCCC
Q 005147 495 PLVRHSQLSSDGRTSKPLVNERSS---INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL--NSSN 569 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~--~h~~ 569 (712)
.-|.++.|||||+.++....+... ...-.++||...++.+.| +.+|....|.. |+....... .|..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~F---sPdg~~~~~~~------~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKE---FPLEFENKLDF------ELAQQNGLLNSQPVC 86 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEE---ECCCCCCTTTT------SCCCSSCSSTTSCSC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEE---CCCCCcceEEE------EeCCCceEeecCCCC
Confidence 457899999999987554433221 111244799999999999 44551111111 222222222 5688
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC-----CeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS-----KLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
.|.+++|+|+|.+||+++.||.|+|||... ......|.. .|.+++||| ++++||+|+.||+|+|
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----------~l~~l~~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----------MLTNLDSKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQF 155 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE----------EEEECCCSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------eeeeccCCCccccccEEEEEEcC-CCCEEEEEcCCCEEEE
Confidence 999999999999999999999999999532 122222433 599999999 6999999999999999
Q ss_pred EECCCCc-------EEEEe----ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 645 WDVSRSQ-------VLTEM----REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 645 wD~~~~~-------~~~~~----~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
||+.++. .+.++ .+|.++|.+|+|+| ++ ++++|.|++|++||+..+..
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSS
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCcc
Confidence 9999885 36776 77889999999998 77 88899999999999988773
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-19 Score=186.26 Aligned_cols=164 Identities=16% Similarity=0.201 Sum_probs=124.2
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc------eecCCCCeeEEEEcC--CCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD------LLNSSNLVCSLSFDR--DGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~------~~~h~~~V~~i~f~~--~~~~lat~~~d~~I 592 (712)
..+.||.+.|..+.| + .+|...++...++.+ +|++.++. +.+|.+.|.+++|++ ++++|+||+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~-s--~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQM-D--YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -------CCEEEEEE-C--GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred eecccccCeEEEeeE-c--CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 467899999999999 3 444444444444444 49987653 447999999999986 48999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc---EEEEeccCCCcEEEEEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDF 668 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~---~~~~~~~H~~~v~sv~f 668 (712)
++||++++. ........+|...|++|+|+|.. +.+|++|+.||+|++||++.+. ....+.+|...|.+++|
T Consensus 84 ~iWd~~~~~-----~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 84 IIWREENGT-----WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp EEECCSSSC-----CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred EEEECCCCc-----ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 999997521 11223345789999999999952 7899999999999999998763 24567789999999999
Q ss_pred ecCC----------------CCEEEEEECCCcEEEEeCCCC
Q 005147 669 SSAD----------------PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 669 sp~~----------------~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+|.. +.+|++||.|++|++||++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 9831 478999999999999999755
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.79 E-value=7.6e-18 Score=185.49 Aligned_cols=198 Identities=17% Similarity=0.296 Sum_probs=153.8
Q ss_pred CCCCCCcccccccCCCC-CCCCc---------cccCC---------CCCCceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDG-RTSKP---------LVNER---------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g-~~~~~---------~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
..+|...++++.|+|++ ..+++ +.... ...+...+.+|.+.+.+++| ++...+.+...+.
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW-NPNLNGYLLSASD 202 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE-CTTSTTEEEEECT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe-CCCCCCeEEEEeC
Confidence 34566778888888873 32221 11111 14677889999999999999 5555555555555
Q ss_pred CCcEEEEEccCCc-----------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC
Q 005147 551 SKLRVKADLNQGD-----------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (712)
Q Consensus 551 ~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~ 618 (712)
+....+|++..+. +.+|...|.+++|+| ++.+|++|+.|+.|++||+++... .........|..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~ 278 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT----SKPSHTVDAHTA 278 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS----SSCSEEEECCSS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC----CcceeEeecCCC
Confidence 5555569998621 237899999999999 678999999999999999986311 112233458899
Q ss_pred CeEEEEEcCCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.|++++|+|....+|++|+.||+|++||+++ ++++.++..|...|++++|+|....+|++|+.|+.|+|||++.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999996556899999999999999998 5789999999999999999994447899999999999999987
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=187.88 Aligned_cols=196 Identities=14% Similarity=0.177 Sum_probs=142.1
Q ss_pred CcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc--
Q 005147 495 PLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD-- 563 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~-- 563 (712)
..+....|++||..+++...+. .......+.+|.+.+..+.| ++ ++...++...++.+ +|++.+++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF-FP--SGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE-CT--TSSEEEEEETTSEEEEEETTTCCCC
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE-CC--CCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 3444556788887654332222 12233455799999999999 33 44444444445554 49998765
Q ss_pred --eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc-----cccceEE------------ecCCCCeEEEE
Q 005147 564 --LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD-----IHYPVVE------------MASRSKLSSIC 624 (712)
Q Consensus 564 --~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-----~~~~~~~------------~~~~~~v~~v~ 624 (712)
+.+|...|.+++|+|++.+|++|+.|++|++||+++....... ....+.. ..+...+++++
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE 254 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence 3469999999999999999999999999999999763211100 0000000 01234555566
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCcE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|+| ++.+|++|+.||.|++||+++++.+..+. .|...|++++|+| ++. +|++|+.|+.|++||++++..
T Consensus 255 ~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 255 FGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp SSC-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EcC-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 677 58899999999999999999998877775 5889999999998 666 999999999999999998865
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=209.03 Aligned_cols=203 Identities=10% Similarity=0.049 Sum_probs=156.2
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC-------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
.+|...+++++|+|||..+++...+.. ........+|...|..+.| ++ ...+...+.+....+|++.+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~f-sp--g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRF-VK--GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEE-ET--TTEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEE-cC--CCEEEEEECcCeEEEEECCCCc
Confidence 367778999999999997755443321 1122233468889999999 44 3345555555545559999876
Q ss_pred ee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc---ccc-eEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 564 LL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI---HYP-VVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 564 ~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---~~~-~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+. .|.+.|++++|+|++++|++|+.|++|++||+++........ ... ....+|...|++|+|+|.++..|++|
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 54 467899999999999999999999999999997632210000 000 11246889999999999667899999
Q ss_pred eCCCcEEEEECCCCcEEEEeccC------------------CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREH------------------ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H------------------~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
+.||+| |||+++++++.++..| ...|++|+|+| ++.+||||+.|++|++||+++++++..
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 999999 9999999999998766 57899999998 899999999999999999999988753
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.4e-18 Score=177.48 Aligned_cols=171 Identities=17% Similarity=0.250 Sum_probs=133.9
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc----e----ecCCCCeeEEEEcC--CCCEEEEEeCCC
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD----L----LNSSNLVCSLSFDR--DGELFAAAGVNK 590 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~----~----~~h~~~V~~i~f~~--~~~~lat~~~d~ 590 (712)
..++||.+.|..+.| + .++...++...++.++ |++.++. + .+|...|.+++|+| ++++|++|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~-~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVY-D--FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEE-C--SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEE-c--CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 467899999999999 3 3555455555556554 9998652 2 36999999999999 699999999999
Q ss_pred cEEEEEcCCccccCcc--cccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc----------------
Q 005147 591 KIKVFECDAIINENRD--IHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ---------------- 651 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~--~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~---------------- 651 (712)
.|++||+++....... .........|...|++++|+|.. +.+|++|+.||.|++||+++++
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999864321111 12233455789999999999932 8899999999999999987543
Q ss_pred --------------------------------------------EEEEeccCCCcEEEEEEecCCC----CEEEEEECCC
Q 005147 652 --------------------------------------------VLTEMREHERRVWSIDFSSADP----TLLASGSDDG 683 (712)
Q Consensus 652 --------------------------------------------~~~~~~~H~~~v~sv~fsp~~~----~~l~sgs~D~ 683 (712)
.+..+.+|...|++++|+| ++ .+|++|+.|+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEEETTS
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEEcCCC
Confidence 2556778999999999998 66 8999999999
Q ss_pred cEEEEeCCCCcEE
Q 005147 684 SVKLWSINQAILL 696 (712)
Q Consensus 684 ~v~lWd~~~~~~v 696 (712)
.|++||++++...
T Consensus 241 ~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 241 RIRIFKITEKLSP 253 (351)
T ss_dssp CEEEEEEEECC--
T ss_pred eEEEEeCCCCcCc
Confidence 9999999876544
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-17 Score=174.54 Aligned_cols=194 Identities=14% Similarity=0.161 Sum_probs=155.3
Q ss_pred CCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
++...+++..|+|||..+.....+. .......+.+|...+..+.| ++ ++...+....++. .+|+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~-~~--~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI-SP--DSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE-CT--TSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEE-CC--CCCEEEEEeCCCcEEEEeCC
Confidence 5677899999999998653332221 11234577899999999999 33 4444444444444 459998
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+++.. +|...|.+++|+|++++|++++.|+.|++||+++. .......+...+.+++|+| ++.+|+++
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 242 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSLGYCP-TGEWLAVG 242 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECT-TSSEEEEE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEEEECC-CCCEEEEE
Confidence 87643 58999999999999999999999999999999762 2344456788999999999 59999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.||.|++||++++... .+..|...|++++|+| ++.+|++++.|+.|++||+.+++.+...
T Consensus 243 ~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cCCCcEEEEECCCCCeE-EEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEe
Confidence 99999999999988754 6788999999999998 9999999999999999999999887543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.9e-18 Score=178.61 Aligned_cols=165 Identities=14% Similarity=0.155 Sum_probs=135.9
Q ss_pred eeccCCCccceecccCCC---CCCcEEEEEcCCcEEEEEccCCcee---------cCCCCeeEEEEcCC----CCEEEEE
Q 005147 523 GSKEGYSEGRRSGWINPF---LEGLCKYLSFSKLRVKADLNQGDLL---------NSSNLVCSLSFDRD----GELFAAA 586 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~dl~~~~~~---------~h~~~V~~i~f~~~----~~~lat~ 586 (712)
.+.||.+.+..+.| +|. .+..+.+...++...+|++.++... .|...|.+++|+|+ +.+|++|
T Consensus 13 ~~~~h~~~v~~i~~-~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 13 LKEDHNQPLFGVQF-NWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EECTTCSCEEEEEE-CTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred eecCCCCceEEEEE-ecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 45589999999999 543 3444555555554445998865532 25688999999998 6799999
Q ss_pred eCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---ccCCCcE
Q 005147 587 GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---REHERRV 663 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---~~H~~~v 663 (712)
+.|+.|++||+.+. .......+|...|++++|+|.++++|++|+.||.|++||+++++.+..+ .+|...|
T Consensus 92 ~~dg~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 92 GSRGIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp ETTCEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred cCCCEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 99999999999752 1223345799999999999966899999999999999999999999998 7899999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
++++|+| ++.+|++|+.|+.|++||+++++.+
T Consensus 165 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 165 LSADYDL-LGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEESCSHHHH
T ss_pred eEEEECC-CCCEEEEecCCCCEEEEECCCCccc
Confidence 9999998 9999999999999999999987654
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-18 Score=181.79 Aligned_cols=169 Identities=11% Similarity=0.135 Sum_probs=136.1
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcC-CCCEEEEEeCCCcEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDR-DGELFAAAGVNKKIKV 594 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~-~~~~lat~~~d~~I~i 594 (712)
..+.+|.+.+..+.| ++....++...+.+....+|++.++... +|.+.|.+++|+| ++++|++|+.|+.|++
T Consensus 67 ~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 67 RTASPFDRRVTSLEW-HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEECCCSSCEEEEEE-CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EeccCCCCCEEEEEE-CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 467899999999999 4433346666666655566999876532 5999999999999 7899999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||++.. ..........+...|.+++|+| ++.+|++|+.||.|++||+ +++++.++.+|...|++++|+| ++.
T Consensus 146 wd~~~~-----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~ 217 (383)
T 3ei3_B 146 RDFSGS-----VIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCD 217 (383)
T ss_dssp EETTSC-----EEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCT
T ss_pred EECCCC-----ceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCC
Confidence 999741 1111111123457899999999 6899999999999999999 5889999999999999999998 666
Q ss_pred -EEEEEECCCcEEEEeCCC----CcEEEEE
Q 005147 675 -LLASGSDDGSVKLWSINQ----AILLLHL 699 (712)
Q Consensus 675 -~l~sgs~D~~v~lWd~~~----~~~v~~~ 699 (712)
+|++|+.|++|++||+++ +..+..+
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM 247 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe
Confidence 999999999999999998 5555544
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=188.07 Aligned_cols=194 Identities=11% Similarity=0.094 Sum_probs=144.3
Q ss_pred ccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---
Q 005147 497 VRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL--- 565 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~--- 565 (712)
++++.|+|||..++....+.. ......+.+| .+....++++ ....+.+.+.+....+|++.++...
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 457889999987644332221 1122233344 2333333232 2334444455545555998877643
Q ss_pred -cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 -NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 -~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
+|.+.|.+++|+|++++|++|+.|++|++||+++. .......+|...|++++|+| ++.+|++|+.||+|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-------SNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRL 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-------cCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEE
Confidence 68999999999999999999999999999999753 22344567999999999999 5999999999999999
Q ss_pred EECCCCcEEEEecc---CCCcEEEEEE---------------------ecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 645 WDVSRSQVLTEMRE---HERRVWSIDF---------------------SSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 645 wD~~~~~~~~~~~~---H~~~v~sv~f---------------------sp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
||+++++++..+.. |...|.+++| +| ++.+|++|+.|+.|++||++++..+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 99999999999875 4556666665 55 78899999999999999999999888776
Q ss_pred ce
Q 005147 701 DV 702 (712)
Q Consensus 701 ~~ 702 (712)
..
T Consensus 287 ~~ 288 (420)
T 3vl1_A 287 SK 288 (420)
T ss_dssp CT
T ss_pred cc
Confidence 43
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=177.83 Aligned_cols=171 Identities=15% Similarity=0.191 Sum_probs=135.0
Q ss_pred CCceeeccCCCccceecccCCCC-CCcEEEEEcCCcEE-EEEccC-Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCC
Q 005147 519 INNLGSKEGYSEGRRSGWINPFL-EGLCKYLSFSKLRV-KADLNQ-GD-----LLNSSNLVCSLSFDRDGELFAAAGVNK 590 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~-~~~~~~~~~~~~~v-~~dl~~-~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~ 590 (712)
.+...+++|.+.+..+.| ++.. +|...++...++.+ +|++.+ +. +.+|.+.|.+++|+|++++|++|+.|+
T Consensus 30 ~~~~~~~~h~~~v~~~~~-~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSF-SPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEE-CCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEeccCCCCceEEEEE-cCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 455678899999999999 4332 13444444444554 499986 33 346999999999999999999999999
Q ss_pred cEEEEEcCCccccCcccccceEEecCCCCeEEEEE--cCCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVVQVWDVSRSQVLTE------------- 655 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~------------- 655 (712)
.|++||+++. .......|...|++++| +| ++.+|++|+.||.|++||+++++++..
T Consensus 109 ~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 109 TAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI 179 (368)
T ss_dssp EEEEEETTTT--------EEEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE
T ss_pred cEEEEEcCCC--------CceeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec
Confidence 9999999762 23446679999999999 77 588999999999999999987643222
Q ss_pred -----------------------------------------------------------------------------ecc
Q 005147 656 -----------------------------------------------------------------------------MRE 658 (712)
Q Consensus 656 -----------------------------------------------------------------------------~~~ 658 (712)
+.+
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 233
Q ss_pred CCC------------cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 HER------------RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 H~~------------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|.. .|++++|+| ++.+|++|+.|+.|++||+++++++..+.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 433 699999998 89999999999999999999998886654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-18 Score=181.18 Aligned_cols=200 Identities=14% Similarity=0.071 Sum_probs=133.7
Q ss_pred CCCCCcccccccCCCCCCCCccccCCCC----CC-ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERSS----IN-NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~ 564 (712)
..|...++++.|||||..++....+... .+ ......+...+..+.|. +..+.+.+....+..++ ||+.+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRML--HRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEEC--TTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEc--CCCCEEEEEECCccEEEEEECCCCcE
Confidence 5677889999999999976443322110 00 11111222234445552 23344444444444544 88887765
Q ss_pred e---cCCCCeeEEEEcCCC-----------------------------------CEEEE--EeCCCcEEEEEcCCccccC
Q 005147 565 L---NSSNLVCSLSFDRDG-----------------------------------ELFAA--AGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~-----------------------------------~~lat--~~~d~~I~iwD~~~~~~~~ 604 (712)
. .+...|.++.|+++. .++++ |+.|+.|++||+++.....
T Consensus 94 ~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred EEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence 4 367788888888653 22333 3456666666665421000
Q ss_pred c--------cccc-ceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc-EEEEECCCCcEEEEec-c-CCCcEEEEEEecCC
Q 005147 605 R--------DIHY-PVVEMASRSKLSSICWNSYIKSQIASSNFEGV-VQVWDVSRSQVLTEMR-E-HERRVWSIDFSSAD 672 (712)
Q Consensus 605 ~--------~~~~-~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~-V~lwD~~~~~~~~~~~-~-H~~~v~sv~fsp~~ 672 (712)
. .... .....+|...|++++|+| ++.+||||+.||+ |+|||+++++++.++. + |...|++++|+| +
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~-~ 251 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST-D 251 (355)
T ss_dssp -------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT-T
T ss_pred cccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC-C
Confidence 0 0000 345668999999999999 6999999999998 9999999999999998 5 999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCc
Q 005147 673 PTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+.+|++||.|++|+|||++.+.
T Consensus 252 ~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 252 GSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SCEEEEEETTCEEEEEESSCCS
T ss_pred CCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999999998653
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=182.71 Aligned_cols=152 Identities=16% Similarity=0.132 Sum_probs=128.6
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCcee-----cCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCccccc
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLL-----NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~-----~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~ 609 (712)
+++..|+.+.+|+.+.....|++.++.++ +|.+.|.+++|+| ++++|++|+.|++|++||+++... .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~------~ 162 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ------Y 162 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE------E
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE------E
Confidence 56788999999998887777998877632 4568899999999 999999999999999999976321 1
Q ss_pred ceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEE-EEecc-CCCcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL-TEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 610 ~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~-~~~~~-H~~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
......+...|++++|+| ++.+||+|+.||.|+|||+++++.+ .++.. |..+|++++|+| ++.+|++|++| .|++
T Consensus 163 ~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~~~-~v~i 239 (343)
T 3lrv_A 163 IVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVECDQ-TVVC 239 (343)
T ss_dssp EEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEESS-BEEE
T ss_pred EEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEeCC-eEEE
Confidence 112234566799999999 6999999999999999999999887 88998 999999999998 99999999955 9999
Q ss_pred EeCCCCcEEE
Q 005147 688 WSINQAILLL 697 (712)
Q Consensus 688 Wd~~~~~~v~ 697 (712)
||+++++.+.
T Consensus 240 wd~~~~~~~~ 249 (343)
T 3lrv_A 240 FDLRKDVGTL 249 (343)
T ss_dssp EETTSSTTCB
T ss_pred EEcCCCCcce
Confidence 9999987653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=204.51 Aligned_cols=172 Identities=19% Similarity=0.179 Sum_probs=128.4
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee---------------cCCCCeeEEEEcCCCCEEEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---------------NSSNLVCSLSFDRDGELFAAA 586 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---------------~h~~~V~~i~f~~~~~~lat~ 586 (712)
.++||...+..+.| +.++.+.++...++.|+ ||+.++.+. +|...|.+|+|+|++++||+|
T Consensus 430 ~l~G~~~~v~sv~~---spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg 506 (902)
T 2oaj_A 430 LLKGGVRTKRQKLP---AEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVS 506 (902)
T ss_dssp SCCCSBCCCCCCCC---CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred cccCCcCCCCcccc---cccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence 45666666555555 33444444444444444 776655321 688999999999999999999
Q ss_pred eCCCcEEEEEcCCccccC----------------------cc----------------cccceEEecCCCCeEEEEEcCC
Q 005147 587 GVNKKIKVFECDAIINEN----------------------RD----------------IHYPVVEMASRSKLSSICWNSY 628 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~----------------------~~----------------~~~~~~~~~~~~~v~~v~~~p~ 628 (712)
+.|++|+|||+.+..... .. ..+.....+|...|++|+|+|
T Consensus 507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp- 585 (902)
T 2oaj_A 507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN- 585 (902)
T ss_dssp ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-
T ss_pred ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-
Confidence 999999999997642100 00 011233456999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEE-----Eec-cCCCcEEEEEEe-----cCCC---CEEEEEECCCcEEEEeC---C
Q 005147 629 IKSQIASSNFEGVVQVWDVSRSQVLT-----EMR-EHERRVWSIDFS-----SADP---TLLASGSDDGSVKLWSI---N 691 (712)
Q Consensus 629 ~~~~lasgs~Dg~V~lwD~~~~~~~~-----~~~-~H~~~v~sv~fs-----p~~~---~~l~sgs~D~~v~lWd~---~ 691 (712)
++ +||+|+.|++|+|||++++..+. .+. +|+..|++|+|+ | |+ .+|++||.|++|++||+ .
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~-Dg~~~~~l~sgs~D~tv~~wd~~p~~ 663 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD-DGYSSILMVCGTDMGEVITYKILPAS 663 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT-SSSEEEEEEEEETTSEEEEEEEEECG
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCC-CCCcceEEEEEecCCcEEEEEEecCC
Confidence 58 99999999999999998887664 233 899999999999 8 64 89999999999999999 7
Q ss_pred CCcEEEEEe
Q 005147 692 QAILLLHLV 700 (712)
Q Consensus 692 ~~~~v~~~~ 700 (712)
+|+.+.++.
T Consensus 664 ~g~~~~~~~ 672 (902)
T 2oaj_A 664 GGKFDVQLM 672 (902)
T ss_dssp GGCEEEEEE
T ss_pred CCcEEEEec
Confidence 888776543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=194.76 Aligned_cols=168 Identities=16% Similarity=0.160 Sum_probs=136.4
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC---------ceecCCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG---------DLLNSSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~---------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
-.++||.+.|..+.| ++....++...+.+....+|++... .+.+|...|.+++|+|++++|+||+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~-~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIAT-PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEEC-CTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhcccCCceeEEEEe-cCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 358899999999999 4444445555555555555998653 245799999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---ccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---REHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---~~H~~~v~sv~fs 669 (712)
+|||+.++ .......+|...|.+++|+| ++++|+||+.|++|+|||+......... .+|...|++++|+
T Consensus 455 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 455 RLWDLAAG-------VSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred EEEECCCC-------cceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 99999763 22344568999999999999 6899999999999999998765443332 4699999999999
Q ss_pred cCCC--CEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 670 SADP--TLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 670 p~~~--~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
| ++ ..|++||.|++|++||+++++.+..+
T Consensus 527 ~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 527 P-NTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp S-CSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred C-CCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 8 54 68999999999999999988876554
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.2e-18 Score=183.05 Aligned_cols=165 Identities=17% Similarity=0.190 Sum_probs=137.5
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----------eecCCCCeeEEEEcCCC-CEEEEEeC
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----------LLNSSNLVCSLSFDRDG-ELFAAAGV 588 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~~~-~~lat~~~ 588 (712)
...+.||.+.+..+.| +++...++...+.+....+|++.++. +.+|...|.+++|+|++ .+|++|+.
T Consensus 74 ~~~~~~h~~~V~~~~~-~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAW-CPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCCBCCCSSCEEEEEE-CTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CceEecCCCCEEEEEe-CCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3467899999999999 55455555555555444559998762 34699999999999998 69999999
Q ss_pred CCcEEEEEcCCccccCcccccceEE--ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-ccCCCc-EE
Q 005147 589 NKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-REHERR-VW 664 (712)
Q Consensus 589 d~~I~iwD~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-~~H~~~-v~ 664 (712)
|+.|++||+++. ...... ..|...|++++|+| ++++|++|+.||.|++||+++++.+.++ ..|.+. +.
T Consensus 153 dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 153 DNVILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TSCEEEEETTTT-------EEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CCEEEEEECCCC-------CccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 999999999762 112223 46899999999999 6999999999999999999999999999 788876 99
Q ss_pred EEEEecCCCCEEEEE---ECCCcEEEEeCCCCcE
Q 005147 665 SIDFSSADPTLLASG---SDDGSVKLWSINQAIL 695 (712)
Q Consensus 665 sv~fsp~~~~~l~sg---s~D~~v~lWd~~~~~~ 695 (712)
++.|+| ++.+|++| +.|+.|++||++++..
T Consensus 225 ~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 225 HAVFVS-EGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp EEEECS-TTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred EEEEcC-CCcEEEEeccCCCCceEEEEcCccccC
Confidence 999998 89999999 7999999999998765
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.77 E-value=7.5e-18 Score=182.09 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=154.0
Q ss_pred CCCCCcccccccCCC----C---CCCCccccCCC--------CCC-----ceeeccC-----CCccceecccCCC--CCC
Q 005147 491 PSGRPLVRHSQLSSD----G---RTSKPLVNERS--------SIN-----NLGSKEG-----YSEGRRSGWINPF--LEG 543 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~----g---~~~~~~~~~~~--------~~~-----~~~l~gh-----~~~~~~~~~~~~~--~~~ 543 (712)
.+|...++++.|+++ | ..++....+.. ... ...+.+| ...+..+.| ++. .++
T Consensus 59 ~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~ 137 (397)
T 1sq9_A 59 FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW-GASNDRLL 137 (397)
T ss_dssp ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEE-ECCC----
T ss_pred ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEE-eeccCCCC
Confidence 367778899999999 8 65433222211 112 5677888 588999999 311 344
Q ss_pred cE--EEEEcCCcEEEEEccC------Ccee----------------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 005147 544 LC--KYLSFSKLRVKADLNQ------GDLL----------------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 544 ~~--~~~~~~~~~v~~dl~~------~~~~----------------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~ 599 (712)
.. .+.+.+....+|++.. +... .|...|.+++|+|++ +|++|+.|+.|++||+++
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST 216 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT
T ss_pred ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC
Confidence 43 4444444444599987 4322 278999999999999 999999999999999975
Q ss_pred ccccCcccccceEEec---C---CCCeEEEEEcCCCCCEEEEEeCC---CcEEEEECCCCcEEEEecc------------
Q 005147 600 IINENRDIHYPVVEMA---S---RSKLSSICWNSYIKSQIASSNFE---GVVQVWDVSRSQVLTEMRE------------ 658 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~---~---~~~v~~v~~~p~~~~~lasgs~D---g~V~lwD~~~~~~~~~~~~------------ 658 (712)
. ........ | ...|.+++|+| ++.+|++|+.| |.|++||+++++++..+.+
T Consensus 217 ~-------~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 217 L-------RPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp T-------EEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred C-------ceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence 2 12223334 7 89999999999 59999999999 9999999999999999999
Q ss_pred -CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 -HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 -H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|...|++++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 289 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 289 AHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999999999998 89999999999999999999999887776
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-18 Score=184.68 Aligned_cols=198 Identities=14% Similarity=0.130 Sum_probs=148.2
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
.+.+|...++++.|+|||..++....+.. ..+...+.+|...+..+.| ++ ....+.+.+.+....+|
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~l~~~~~d~~i~iw 127 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW-SP-NEDKFAVGSGARVISVC 127 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC-CT-TSSCCEEEESSSCEEEC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE-CC-CCCEEEEEecCCeEEEE
Confidence 45678888999999999987644332221 2356788899999999999 44 22344444555445559
Q ss_pred EccCCc-------eec-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc----------ccccceEEecCCCC
Q 005147 558 DLNQGD-------LLN-SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSK 619 (712)
Q Consensus 558 dl~~~~-------~~~-h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~----------~~~~~~~~~~~~~~ 619 (712)
++..+. +.+ |...|.+++|+|++++|++|+.|++|++||+++...... ....++....|...
T Consensus 128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T 3dwl_C 128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGW 207 (377)
T ss_dssp CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSS
T ss_pred EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCce
Confidence 988654 224 899999999999999999999999999999964211110 00112333388999
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE----EEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~----~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|++++|+| ++.+|++|+.||+|+|||+++++. +.++.+|..+|++++|+| ++.+|++|++|+.+ +|+..
T Consensus 208 v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 208 VHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 99999999 689999999999999999999987 888999999999999998 89999999877766 66554
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.5e-18 Score=191.97 Aligned_cols=169 Identities=10% Similarity=0.093 Sum_probs=135.5
Q ss_pred eeeccCCCccceecccCCC----C-CCcEEEEEcCCcEEEEEccCC---------------ceecCCCCeeEEEEcCCCC
Q 005147 522 LGSKEGYSEGRRSGWINPF----L-EGLCKYLSFSKLRVKADLNQG---------------DLLNSSNLVCSLSFDRDGE 581 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~----~-~~~~~~~~~~~~~v~~dl~~~---------------~~~~h~~~V~~i~f~~~~~ 581 (712)
..+.+|.+.+..+.| ++. . .++++..+.+....+|++..+ .+.+|...|++++|+++ .
T Consensus 201 ~~l~~~~~~V~~v~w-sp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~ 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKW-HEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-T 278 (524)
T ss_dssp EEEEECCCSEEEEEE-CSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-S
T ss_pred EEEEecCCcEEEEEE-CCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-C
Confidence 346788999999999 553 1 246666666655556999755 23468899999999986 4
Q ss_pred EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEE--EEcCCCC-CEEEEEeCCCcEEEEECCCCcEEEEecc
Q 005147 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI--CWNSYIK-SQIASSNFEGVVQVWDVSRSQVLTEMRE 658 (712)
Q Consensus 582 ~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~p~~~-~~lasgs~Dg~V~lwD~~~~~~~~~~~~ 658 (712)
.||+|+.|++|++||+++.. .......+|...|++| +|+| ++ .+||||+.||+|+|||+++++++.++.+
T Consensus 279 ~lasgs~DgtV~lWD~~~~~------~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~ 351 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPE------VPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVS 351 (524)
T ss_dssp EEEEEETTSEEEEEETTBCS------SCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred eEEEEeCCCEEEEEECCCCC------CceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence 89999999999999997521 1123456899999999 4566 56 8999999999999999999988888888
Q ss_pred CCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 HER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|.. .|++|+|+| ++..+++|+.|++|++||++++.++.++.
T Consensus 352 ~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 352 RFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp ECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred ccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeee
Confidence 864 589999998 88999999999999999999988766543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=178.85 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=134.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccC--Cc----eecCCCCeeEEEEcCC--CCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQ--GD----LLNSSNLVCSLSFDRD--GELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~--~~----~~~h~~~V~~i~f~~~--~~~lat~~~d~~ 591 (712)
...++||.+.+..+.| + .++...+.. .+....+|++.. +. +.+|.+.|.+++|+++ +++|++|+.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~-s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVL-D--YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEE-C--SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEE-c--CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4578999999999999 3 445444444 444445599873 32 3369999999999987 899999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~f 668 (712)
|++||+.+.. .........|...|.+++|+|.. +.+|++++.||.|++||++++ .....+.+|...|++++|
T Consensus 81 v~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 81 VLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EEEEEcCCCc-----eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 9999997521 11234455689999999999932 789999999999999999987 345567889999999999
Q ss_pred ecC------------CCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 669 SSA------------DPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 669 sp~------------~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+|. ++.+|++|+.|+.|++||++++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 985 6899999999999999999877643
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=178.02 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=146.0
Q ss_pred CCCCCcccccccCC-CCCCCCccccCCC-------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccC
Q 005147 491 PSGRPLVRHSQLSS-DGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~ 561 (712)
.+|...++++.|+| ++..++....+.. ....+....+...+..+.|.....++.+.+....++. .+|++.+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 45778899999999 5444333222221 1112233346677778888433334444444444444 4599987
Q ss_pred Cce----ecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcc---------cccceEEecCCCCeEEEEEcC
Q 005147 562 GDL----LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRD---------IHYPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 562 ~~~----~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~---------~~~~~~~~~~~~~v~~v~~~p 627 (712)
+.. .+|.+.|.+++|+|++. +|++|+.|+.|++||+++....... .........|...|++++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 763 36899999999999988 6999999999999999763210000 000111246889999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC-----------------------------------------------cEEEEeccCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRS-----------------------------------------------QVLTEMREHE 660 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~-----------------------------------------------~~~~~~~~H~ 660 (712)
++.+|++++.||.|++||++++ +++..+.+|.
T Consensus 256 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 334 (408)
T 4a11_B 256 -DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY 334 (408)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS
T ss_pred -CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC
Confidence 6999999999999999998753 4567788899
Q ss_pred CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 661 RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 661 ~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
..|++++|+| ++.+|++|+.||.|++||+++++.+...
T Consensus 335 ~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 335 KTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEEECC-------
T ss_pred CeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 9999999998 8999999999999999999998877543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=182.21 Aligned_cols=200 Identities=13% Similarity=0.140 Sum_probs=152.4
Q ss_pred CCCCCCCcccccccCCC-CCCCCccccC---------CCC------CC--ceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 489 VKPSGRPLVRHSQLSSD-GRTSKPLVNE---------RSS------IN--NLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~---------~~~------~~--~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
.+.+|...+++..|+|+ |..++....+ ... .+ ...+.+|...+..+.| ++....++...+.
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW-NQSLAHVFASAGS 186 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE-CSSCTTEEEEESS
T ss_pred hccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe-CCCCCcEEEEEcC
Confidence 35678888999999998 5543222211 111 11 1234789999999999 4432334444444
Q ss_pred CCcEEEEEccCCcee----cC------CCCeeEEEEcCCC-CEEEEEeCCC---cEEEEEcCCccccCcccccceEEe-c
Q 005147 551 SKLRVKADLNQGDLL----NS------SNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEM-A 615 (712)
Q Consensus 551 ~~~~v~~dl~~~~~~----~h------~~~V~~i~f~~~~-~~lat~~~d~---~I~iwD~~~~~~~~~~~~~~~~~~-~ 615 (712)
+....+|++++++.. .| ...|.+++|+|++ .+|++++.|+ .|++||+++... ...... +
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~------~~~~~~~~ 260 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT------PLQTLNQG 260 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS------CSBCCCSC
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC------CcEEeecC
Confidence 444445999877643 23 7889999999987 6999999999 999999976311 111223 6
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC-CEEEEEECCCcEEEEeCCCCc
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP-TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~-~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|...|++++|+|.++.+|++|+.||+|++||+++++++.++.+|...|++++|+| ++ .+|++|+.|+.|++||+.++.
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECT-TCTTEEEECCSSSEEEEEESCCCC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECC-CCCCEEEEEecCCcEEEEEccCCC
Confidence 8899999999996799999999999999999999999999999999999999998 66 899999999999999998876
Q ss_pred EE
Q 005147 695 LL 696 (712)
Q Consensus 695 ~v 696 (712)
..
T Consensus 340 ~~ 341 (416)
T 2pm9_A 340 NT 341 (416)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=176.92 Aligned_cols=202 Identities=17% Similarity=0.169 Sum_probs=145.5
Q ss_pred CCCCCCccccc------ccCCCCCCCCccccC---------CCCCCceeeccCCC----ccceecccC-CCCCCcEEEEE
Q 005147 490 KPSGRPLVRHS------QLSSDGRTSKPLVNE---------RSSINNLGSKEGYS----EGRRSGWIN-PFLEGLCKYLS 549 (712)
Q Consensus 490 ~~~~~~~~~~~------~~~~~g~~~~~~~~~---------~~~~~~~~l~gh~~----~~~~~~~~~-~~~~~~~~~~~ 549 (712)
+.+|...+++. .|++||..++....+ ....+...+..|.+ .+..+.|-. -..++...+..
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 44677777777 678888765333222 22225556666555 565666311 02355555555
Q ss_pred cCCcEEE-EEccCCcee---cCCCCeeEEEEcC---CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEE
Q 005147 550 FSKLRVK-ADLNQGDLL---NSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622 (712)
Q Consensus 550 ~~~~~v~-~dl~~~~~~---~h~~~V~~i~f~~---~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~ 622 (712)
..++.+. |+++++... .|...|.+++|+| ++++|++|+.|+.|++||+++...... .......+|...|++
T Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~~~~~v~~ 264 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG--FASVSEKAHKSTVWQ 264 (357)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE--EEEEEEECCSSCEEE
T ss_pred ccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc--eeeeccCCCcCCEEE
Confidence 5555555 999987754 5899999999999 999999999999999999976321110 111123479999999
Q ss_pred EEEcCCCCC-EEEEEeCCCcEEEEECCCC-------------------cEEEEeccCCCcEEEEEEecCCCCEEE-EEEC
Q 005147 623 ICWNSYIKS-QIASSNFEGVVQVWDVSRS-------------------QVLTEMREHERRVWSIDFSSADPTLLA-SGSD 681 (712)
Q Consensus 623 v~~~p~~~~-~lasgs~Dg~V~lwD~~~~-------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~-sgs~ 681 (712)
++|+|. +. +|++|+.||.|++||++++ +++.++.+|...|++++|+| ++.+|+ +|+.
T Consensus 265 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~ 342 (357)
T 3i2n_A 265 VRHLPQ-NRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSF 342 (357)
T ss_dssp EEEETT-EEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEET
T ss_pred EEECCC-CCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecC
Confidence 999995 55 8999999999999999854 46888999999999999998 787777 8999
Q ss_pred CCcEEEEeCCCCcE
Q 005147 682 DGSVKLWSINQAIL 695 (712)
Q Consensus 682 D~~v~lWd~~~~~~ 695 (712)
|+.|++||+.+...
T Consensus 343 d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 343 DQTVRVLIVTKLNK 356 (357)
T ss_dssp TSEEEEEEECC---
T ss_pred CCcEEEEECCCccc
Confidence 99999999987654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=178.90 Aligned_cols=190 Identities=14% Similarity=0.211 Sum_probs=146.9
Q ss_pred CCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCCc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~ 563 (712)
++...+++..|+|||..++....+ ........+.+|...+..+.| ++ ++. +.+.+.+....+|++.++.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~-~~--~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKW-NK--DGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEE-CT--TSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEE-CC--CCCEEEEEecCCeEEEEECCCCc
Confidence 356689999999999865333222 223445677899999999999 33 222 2222222222225443322
Q ss_pred ------------------------------------------------------------eecCCCCeeEEEEcCCCCEE
Q 005147 564 ------------------------------------------------------------LLNSSNLVCSLSFDRDGELF 583 (712)
Q Consensus 564 ------------------------------------------------------------~~~h~~~V~~i~f~~~~~~l 583 (712)
+.+|...|.+++|+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 22578899999999999999
Q ss_pred EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcE
Q 005147 584 AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV 663 (712)
Q Consensus 584 at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v 663 (712)
++++.|+.|++||+++. ........|...|.+++|+|. + +|++++.||.|++||+++++++..+..|...|
T Consensus 263 ~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 333 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNG-------NSQNCFYGHSQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI 333 (425)
T ss_dssp EEEETTSCEEEECSSSB-------SCSEEECCCSSCEEEEEEETT-T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE
T ss_pred EEEcCCCEEEEEECCCC-------ccceEecCCCccEEEEEECCC-C-EEEEEeCCCcEEEEECCCCcEeEecccCCccE
Confidence 99999999999999752 223344568899999999994 5 99999999999999999999999999999999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
++++|+| ++.+|++|+.|+.|++||++++.
T Consensus 334 ~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 334 FAGRISQ-DGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEEEcC-CCCEEEEEECCCeEEEEECCCCc
Confidence 9999998 89999999999999999999877
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=178.04 Aligned_cols=197 Identities=15% Similarity=0.125 Sum_probs=151.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKAD 558 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~d 558 (712)
+.+|...+++..|++||..++....+. ...+...+.+|...+..+.| + .++ .+.+.+.+....+|+
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~--~~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW-A--PNEKKFAVGSGSRVISICY 124 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE-C--TTSSEEEEEETTSSEEEEE
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE-C--CCCCEEEEEeCCCEEEEEE
Confidence 346777899999999998664333222 12334566889999999999 3 344 444444444445599
Q ss_pred ccCCce--------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc-----------CcccccceEEecCCCC
Q 005147 559 LNQGDL--------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------NRDIHYPVVEMASRSK 619 (712)
Q Consensus 559 l~~~~~--------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~-----------~~~~~~~~~~~~~~~~ 619 (712)
+..+.. .+|...|.+++|+|++++|++|+.|+.|++||++..... ............|...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 887541 257899999999999999999999999999997531110 0011122233378899
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
|++++|+| ++.+|++++.||.|++||+++++++..+..|..+|++++|+| ++.++++| .|+.|++||+++
T Consensus 205 v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 205 VHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 99999999 589999999999999999999999999999999999999998 88888887 899999999988
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.76 E-value=9.6e-18 Score=184.67 Aligned_cols=178 Identities=17% Similarity=0.221 Sum_probs=138.5
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC----------Cc----eecCCCCeeEEEEcCCCC-EEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ----------GD----LLNSSNLVCSLSFDRDGE-LFAA 585 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~----------~~----~~~h~~~V~~i~f~~~~~-~lat 585 (712)
...+.+|.+.+..+.| ++....++.+++.+....+|++.. .. +.+|...|++++|+|++. +|++
T Consensus 121 ~~~~~~h~~~v~~l~~-~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 121 IEIKINHEGEVNRARY-MPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEEESSCCSEEEE-ETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEEcCCCcEEEEEE-CCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 3567799999999999 443233444444444444599875 22 347899999999999988 9999
Q ss_pred EeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCc
Q 005147 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERR 662 (712)
Q Consensus 586 ~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~ 662 (712)
|+.|++|++||+.+................|...|.+++|+|.++.+|++++.||.|++||++++ +++..+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999986322222222234455899999999999977899999999999999999987 678888899999
Q ss_pred EEEEEEecCCCCEEEEEECCCcEEEEeCCCC-cEEEEE
Q 005147 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQA-ILLLHL 699 (712)
Q Consensus 663 v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~-~~v~~~ 699 (712)
|++++|+|....++++|+.|++|++||+++. .++..+
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 9999999844458999999999999999984 444433
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-18 Score=179.60 Aligned_cols=200 Identities=12% Similarity=0.096 Sum_probs=150.3
Q ss_pred CCCCCCCcccccccCCC---CCCCCccccC---------C-CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-
Q 005147 489 VKPSGRPLVRHSQLSSD---GRTSKPLVNE---------R-SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR- 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~---g~~~~~~~~~---------~-~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~- 554 (712)
.+.+|...++++.|+|+ |..++....+ . .......+.+|.+.+..+.| ++ ++...++...++.
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW-SD--DGSKVFTASCDKTA 110 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE-CT--TSSEEEEEETTSEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE-Cc--CCCEEEEEcCCCcE
Confidence 45678889999999999 4654333222 2 11222578899999999999 33 5544444444455
Q ss_pred EEEEccCCcee---cCCCCeeEEEE--cCCCCEEEEEeCCCcEEEEEcCCccccCccc----------------------
Q 005147 555 VKADLNQGDLL---NSSNLVCSLSF--DRDGELFAAAGVNKKIKVFECDAIINENRDI---------------------- 607 (712)
Q Consensus 555 v~~dl~~~~~~---~h~~~V~~i~f--~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---------------------- 607 (712)
.+|++.++... +|...|.+++| +|++.+|++|+.|+.|++||+++........
T Consensus 111 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (368)
T 3mmy_A 111 KMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190 (368)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGG
T ss_pred EEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCC
Confidence 44999987644 69999999999 8899999999999999999997632100000
Q ss_pred -------------------------------------------------------------ccceEEecCCC--------
Q 005147 608 -------------------------------------------------------------HYPVVEMASRS-------- 618 (712)
Q Consensus 608 -------------------------------------------------------------~~~~~~~~~~~-------- 618 (712)
........|..
T Consensus 191 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCC
T ss_pred cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccc
Confidence 00011122322
Q ss_pred ----CeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 619 ----KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 619 ----~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.|++++|+| ++.+|++|+.||.|+|||+++++++.++.+|..+|++++|+| ++.+|++||.|+..+.|++-..
T Consensus 271 ~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 271 QDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGGCCT
T ss_pred ccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECC-CCCeEEEEecccccccccccCC
Confidence 699999999 689999999999999999999999999999999999999998 9999999999987766665433
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=178.56 Aligned_cols=193 Identities=16% Similarity=0.247 Sum_probs=152.2
Q ss_pred CCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-c
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-D 563 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-~ 563 (712)
+...++++.|+|||..+++...+. .......+.+|.+.+..+.| + ...+...+.+....+|+++.. .
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~---~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-N---RHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-E---TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-C---CCEEEEEcCCCCEEEEecccCcc
Confidence 667799999999998664432221 12345677899999999999 3 234444444444445999843 2
Q ss_pred ----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe--
Q 005147 564 ----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 637 (712)
Q Consensus 564 ----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-- 637 (712)
+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++. ........|...|.+++|+|....++++|+
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-------SEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-------CccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 4479999999999999999999999999999999752 222344578999999999997678888876
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE--CCCcEEEEeCCCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS--DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs--~D~~v~lWd~~~~~~v~~ 698 (712)
.||.|++||+++++++..+. |...|++++|+| ++.++++++ .|+.|++||+.++.....
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 89999999999999999886 678899999998 899999854 899999999998766544
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=176.76 Aligned_cols=157 Identities=20% Similarity=0.216 Sum_probs=129.7
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----c---C---CCCeeEEEEcCCCCEEEEEeCC---C
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----N---S---SNLVCSLSFDRDGELFAAAGVN---K 590 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~---h---~~~V~~i~f~~~~~~lat~~~d---~ 590 (712)
..|...+..+.| ..++ ..+....++.+. |+++++... . | ...|.+++|+|++.+|++++.| +
T Consensus 183 ~~~~~~i~~~~~---~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 183 MTPSQFATSVDI---SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp SSSCCCCCEEEE---CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred cCCCCCceEEEE---CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 448888899999 3455 455555555554 999876643 5 7 8999999999999999999999 9
Q ss_pred cEEEEEcCCccccCcccccceEEec-------------CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMA-------------SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~-------------~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~ 657 (712)
.|++||+++.. ....... |...|.+++|+| ++.+|++|+.||.|+|||+++++++.++.
T Consensus 259 ~i~i~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 259 CITLYETEFGE-------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEEETTTCC-------EEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCc-------ccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 99999997631 1222333 889999999999 68999999999999999999999999999
Q ss_pred ------cC---------------CCcEEEEEEecCCC----------CEEEEEECCCcEEEEeCCCCc
Q 005147 658 ------EH---------------ERRVWSIDFSSADP----------TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 658 ------~H---------------~~~v~sv~fsp~~~----------~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+| ...|++++|+| ++ .+|++|+.|+.|++||+++|+
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 331 MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC-TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccCcccchhhhhccccccccccCCceeEEEecc-ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 88 99999999998 76 799999999999999998764
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=181.87 Aligned_cols=199 Identities=10% Similarity=0.145 Sum_probs=150.7
Q ss_pred CCCCCcccccccCC-CCCCCCccccCCC------------CCCceeec-cCCCccceecccCCCCCCcEEEEEcCCcEE-
Q 005147 491 PSGRPLVRHSQLSS-DGRTSKPLVNERS------------SINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRV- 555 (712)
Q Consensus 491 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~------------~~~~~~l~-gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 555 (712)
.+|...++++.|+| ||..++....+.. ......+. +|.+.+..+.| + .++...+....++.+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~-~--~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITM-I--PNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEE-C--TTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEE-e--CCCCEEEEEeCCCEEE
Confidence 56788999999999 9986644432221 11111222 69999999999 3 344444444444554
Q ss_pred EEEcc---CCceec----------------CCCCeeEEE--EcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 556 KADLN---QGDLLN----------------SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 556 ~~dl~---~~~~~~----------------h~~~V~~i~--f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
+|++. .+.... +...+.++. +++++.+|++|+.|+.|++||+++.. ......
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~ 209 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE-------RLQIIE 209 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-------EEEEEE
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-------eeEEEc
Confidence 49884 333221 566777777 56789999999999999999997621 122233
Q ss_pred c--CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecC---CCCEEEEEECCCcEEEE
Q 005147 615 A--SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSA---DPTLLASGSDDGSVKLW 688 (712)
Q Consensus 615 ~--~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~---~~~~l~sgs~D~~v~lW 688 (712)
. |...|++++|+| ++.+|++|+.||+|++||+++++++.++. .|..+|++++|+|. ++.+|++|+.|++|++|
T Consensus 210 ~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 210 NSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp CCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred cCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 3 789999999999 59999999999999999999999999986 78899999977762 57799999999999999
Q ss_pred eCCCCcEEEEEe
Q 005147 689 SINQAILLLHLV 700 (712)
Q Consensus 689 d~~~~~~v~~~~ 700 (712)
|+++++++..+.
T Consensus 289 d~~~~~~~~~~~ 300 (437)
T 3gre_A 289 NFVKGHCQYAFI 300 (437)
T ss_dssp ETTTTEEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 999999887765
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=176.25 Aligned_cols=196 Identities=13% Similarity=0.120 Sum_probs=147.5
Q ss_pred CCCCCCcccccccCC-CCCCCCccccCC--------CCCCceee---ccCCCccceecccCCCCCCcEEEEEcCCcE-EE
Q 005147 490 KPSGRPLVRHSQLSS-DGRTSKPLVNER--------SSINNLGS---KEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VK 556 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~--------~~~~~~~l---~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~ 556 (712)
+.+|...+++..|+| +|..++....+. ...+...+ .+|...+..+.| ++ ++...++...++. .+
T Consensus 111 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~--~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 111 YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY-DL--LGEKIMSCGMDHSLKL 187 (366)
T ss_dssp EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE-CT--TSSEEEEEETTSCEEE
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEE-CC--CCCEEEEecCCCCEEE
Confidence 346778899999999 777553333222 12233344 689999999999 43 4444444444444 45
Q ss_pred EEccCCcee--------------------------------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 557 ADLNQGDLL--------------------------------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 557 ~dl~~~~~~--------------------------------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
|+++++... +|...|.+++|+ +++|++++.|+.|++||+++.....
T Consensus 188 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~ 265 (366)
T 3k26_A 188 WRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDI 265 (366)
T ss_dssp EESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCG
T ss_pred EECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccc
Confidence 999876533 189999999998 7899999999999999998643211
Q ss_pred c-------ccccceEEecCCCCeEEEEEcCCC--CCEEEEEeCCCcEEEEECCCCc----EEEEeccC--CCcEEEEEEe
Q 005147 605 R-------DIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFEGVVQVWDVSRSQ----VLTEMREH--ERRVWSIDFS 669 (712)
Q Consensus 605 ~-------~~~~~~~~~~~~~~v~~v~~~p~~--~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H--~~~v~sv~fs 669 (712)
. ..........|...|++++|+| + +.+|++|+.||.|++||+.+++ .+..+.+| ...|++++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 266 DKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp GGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEEC
T ss_pred cccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeC
Confidence 0 0111234457888999999999 6 8999999999999999999875 45578887 7999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCC
Q 005147 670 SADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
| ++.+|++|+.||.|++||+.+
T Consensus 345 ~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 345 R-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp T-TSSEEEEEETTSEEEEEEC--
T ss_pred C-CCCeEEEEeCCCEEEEEEecC
Confidence 8 999999999999999999863
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.1e-17 Score=185.87 Aligned_cols=196 Identities=10% Similarity=0.067 Sum_probs=158.4
Q ss_pred CCCCcccccccCCCCCCCCccc--------cCCCC----CCceeeccCCCc-cceecccCCCCCCcEEEEEcCCcEEE-E
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLV--------NERSS----INNLGSKEGYSE-GRRSGWINPFLEGLCKYLSFSKLRVK-A 557 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~--------~~~~~----~~~~~l~gh~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-~ 557 (712)
.+...++++.|+|||+.+++.. .+ .. .+...+.+|.+. +..+.| ++..++...+....++.+. |
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~-~~~~~~~~~~~~~~h~~~~v~~~~~-sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-DGDSKVPPVVQFTGHGSSVVTTVKF-SPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECC-SSCCSSCSEEEECTTTTSCEEEEEE-CSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECC-CCCCccccceEEecCCCceEEEEEE-CcCCCCCEEEEecCCCEEEEE
Confidence 5667789999999998653321 21 12 466788999999 999999 5532555555555555555 9
Q ss_pred EccCC--------c----eecCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 558 DLNQG--------D----LLNSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 558 dl~~~--------~----~~~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
++.++ . +.+|...|.+++|+|++++|++++.+ +.|++||... .......|...|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~---------~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN---------SLGEVSGHSQRIN 164 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC---------EEEECCSCSSCEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC---------cceeeecCCccEE
Confidence 99754 2 33589999999999999999999988 6899998432 2234457899999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC---cEEEEEEecCC-CCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER---RVWSIDFSSAD-PTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~---~v~sv~fsp~~-~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+++|+|.....+++++.||.|++||+.+++++.++.+|.. .|++++|+| + +.+|++|+.|+.|++||+++++.+.
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 9999995334899999999999999999999999999999 999999998 7 9999999999999999999999887
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
.+
T Consensus 244 ~~ 245 (615)
T 1pgu_A 244 YI 245 (615)
T ss_dssp EC
T ss_pred Ee
Confidence 76
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.2e-17 Score=168.29 Aligned_cols=193 Identities=15% Similarity=0.142 Sum_probs=149.1
Q ss_pred CCCCcccccccCCCCCCCCccccC-----------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE-----------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.+...+++..|+|+|..++....+ ....+...+.+|...+..+.| ....+...+.+....+|+..
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d~~ 132 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWKEG 132 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETT
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEcCC
Confidence 456678899999998865332221 112456778899999999988 23444444444444448832
Q ss_pred CC--ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 561 QG--DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 561 ~~--~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.. .+..|...|.++.|.| ++++|++++.|+.|++||.... .......|...|.+++|+|. +. +++|+
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~i~~~~~~~~-~~-~~~~~ 202 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV--------IKTFSGIHNDVVRHLAVVDD-GH-FISCS 202 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE--------EEEECSSCSSCEEEEEEEET-TE-EEEEE
T ss_pred cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce--------EEEEeccCcccEEEEEEcCC-Ce-EEEcc
Confidence 21 2346899999999998 8999999999999999995421 11222238899999999994 55 99999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++..+.+|...|++++|+| ++ .|++|+.|+.|++||+++++.+..+.
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEE
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEe
Confidence 999999999999999999999999999999998 66 69999999999999999998877654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-17 Score=172.80 Aligned_cols=198 Identities=13% Similarity=0.055 Sum_probs=155.7
Q ss_pred CCCCcccccccCCCCC-CCCccccCC--------CCCCceeecc--CCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSDGR-TSKPLVNER--------SSINNLGSKE--GYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~-~~~~~~~~~--------~~~~~~~l~g--h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
++...++++.|+++|. .+.....+. .......+.+ |...+..+.| ++ ...+...+.+....+|+++
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~-~~--~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICK-YG--DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEE-ET--TTEEEEEETTSEEEEECHH
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEe-CC--CCEEEEEcCCCeEEEEccc
Confidence 5667789999999988 553332221 1223467788 9999999999 44 5555555555555559988
Q ss_pred C---------Ccee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC-ccccCcccccceEEecCCCCeEEEEEcC
Q 005147 561 Q---------GDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-IINENRDIHYPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 561 ~---------~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~~p 627 (712)
+ ++.. .|...|.+++|+|++ +++++.|+.|++||+++ ... ........|...|.+++|+|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD-----NGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp HHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC-----CCEEEECSCSSCEEEEEECS
T ss_pred ccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc-----cceeeecCCCCceeEEEECC
Confidence 7 5532 488999999999887 99999999999999975 221 12234557888999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC------cEEEEeccCCC---------cEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRS------QVLTEMREHER---------RVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~------~~~~~~~~H~~---------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.++.+|++|+.||.|+|||++.. +.+..+..|.. .|++++|+| ++.+|++|+.||.|++||+++
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCcc
Confidence 33889999999999999999887 88888988866 999999998 899999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++.+..+.
T Consensus 283 ~~~~~~~~ 290 (342)
T 1yfq_A 283 RKKIKNFA 290 (342)
T ss_dssp TEEEEECC
T ss_pred HhHhhhhh
Confidence 98876643
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-17 Score=180.44 Aligned_cols=194 Identities=12% Similarity=0.043 Sum_probs=139.4
Q ss_pred CCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCC--ceecC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQG--DLLNS 567 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~--~~~~h 567 (712)
.+|...+.+++|+|||.- ..+..+......+.-.+|...|..+.| +| +|. +++.+.+....+|+...- .+. |
T Consensus 49 ~gh~~~v~~V~FsPdg~~-~~~~~~~~~~~~~~~~~~~~~V~~vaw-SP--dG~~LAs~s~dg~V~iwd~~~~l~~l~-~ 123 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLEFE-NKLDFELAQQNGLLNSQPVCYPRVCKP-SP--IDDWMAVLSNNGNVSVFKDNKMLTNLD-S 123 (588)
T ss_dssp SSBGGGTEEEEEECCCCC-CTTTTSCCCSSCSSTTSCSCCEEEEEE-CS--SSSCEEEEETTSCEEEEETTEEEEECC-C
T ss_pred cCCCccEEEEEECCCCCc-ceEEEEeCCCceEeecCCCCcEEEEEE-CC--CCCEEEEEeCCCcEEEEeCCceeeecc-C
Confidence 468889999999999943 233333222222222266888999999 44 444 566666655566985431 112 4
Q ss_pred CC-----CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc-cccceE---EecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 568 SN-----LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD-IHYPVV---EMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 568 ~~-----~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~---~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
.. .|.+++|+|||++||+|+.||+|+|||+.+....... +..... ..+|...|.+|+|+| ++ +++++.
T Consensus 124 ~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~ 200 (588)
T 2j04_A 124 KGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALS 200 (588)
T ss_dssp SSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEET
T ss_pred CCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeC
Confidence 43 5999999999999999999999999999763110000 000111 146788999999999 46 889999
Q ss_pred CCcEEEEECCCCc---EEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 639 EGVVQVWDVSRSQ---VLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 639 Dg~V~lwD~~~~~---~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
|++|++||+..+. ...++ .+|...|++|+|+ +++||+++ |++|++||+..++..
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSIS 258 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEE
Confidence 9999999998876 34667 4788999999998 58999998 699999999987763
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.2e-17 Score=181.38 Aligned_cols=164 Identities=11% Similarity=0.173 Sum_probs=129.4
Q ss_pred eccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccC-Cc-----------eecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 524 SKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ-GD-----------LLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 524 l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~-~~-----------~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
+.+|...+..+.| ++ ++...+.. +++.+. |++.. +. +.+|...|.+++|+|++ ++|++|+.|
T Consensus 173 ~~~h~~~v~~~~~-~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 173 ANAHTYHINSISI-NS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp CSCCSSCCCEEEE-CT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred ccCCCcceEEEEE-cC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 4799999999999 43 55544555 455555 99983 32 33789999999999998 999999999
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCC------------CeEEEEEcCCCCCEEEEEeCCCcEEEEECCC-CcEEEEe
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRS------------KLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQVLTEM 656 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~------------~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~ 656 (712)
++|++||+++..... ........|.. .|++++|+| ++.+|++++. |.|+|||+++ ++++.++
T Consensus 249 g~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 249 GTIRLCDMRASALCD---RHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp SCEEEEETTTCSSSC---TTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred CeEEEEECcCCcccc---ceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 999999998642110 01122334443 899999999 6999999999 9999999997 8899999
Q ss_pred ccCCCc---------------EEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 657 REHERR---------------VWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 657 ~~H~~~---------------v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
.+|... +.+++|+| ++.+|++|+.|+.|++||+.+++.+.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred eccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCccee
Confidence 988642 33499998 89999999999999999999988763
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=171.47 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=154.5
Q ss_pred CCCCCCCcccccccCC-CCCCCCccccCCC----------CCCcee-----------eccCCCccceecccCCCCCCcEE
Q 005147 489 VKPSGRPLVRHSQLSS-DGRTSKPLVNERS----------SINNLG-----------SKEGYSEGRRSGWINPFLEGLCK 546 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~----------~~~~~~-----------l~gh~~~~~~~~~~~~~~~~~~~ 546 (712)
...+|...+++..|+| ||..++....+.. ....+. ..+|...+..+.| ++....++.
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~ 116 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQW-YPHDTGMFT 116 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEE-CTTCTTCEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEE-ccCCCcEEE
Confidence 4667899999999999 9986644322221 111111 1369999999999 454444555
Q ss_pred EEEcCCcEEEEEccCCcee---cCCCCeeEEEEcCC---CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCe
Q 005147 547 YLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 620 (712)
Q Consensus 547 ~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~~---~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v 620 (712)
..+.+....+|++.++... .+...+.++.|++. +.++++|+.|+.|++||+++. ........|...|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~v 189 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-------SCSHILQGHRQEI 189 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-------CCCEEECCCCSCE
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-------ceeeeecCCCCcE
Confidence 5555555555999987654 47889999999984 459999999999999999753 2233455789999
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-EEEEe---------------ccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEM---------------REHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-~~~~~---------------~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
++++|+|....+|++|+.||.|++||++++. ++..+ .+|...|++++|+| ++.+|++|+.|+.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~ 268 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCe
Confidence 9999999544479999999999999999875 55555 57899999999998 9999999999999
Q ss_pred EEEEeCCCCcEEEE
Q 005147 685 VKLWSINQAILLLH 698 (712)
Q Consensus 685 v~lWd~~~~~~v~~ 698 (712)
|++||+++++.+..
T Consensus 269 i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 269 MRLWNSSNGENTLV 282 (408)
T ss_dssp EEEEETTTCCBCCC
T ss_pred EEEEECCCCcccee
Confidence 99999999876543
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-18 Score=184.61 Aligned_cols=129 Identities=10% Similarity=0.107 Sum_probs=101.6
Q ss_pred eecCCCCeeEEEEcC--------CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 564 LLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~--------~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+.+|.+.|.+|+|+| |+++|||||.|++|+|||+++. ........|...|.+|+|+|.++++|++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEe
Confidence 457999999999998 7899999999999999999642 2345567889999999999976679999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------------------------eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 636 SNFEGVVQVWDVSRSQVLTE-------------------------MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~-------------------------~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
|+.||+|++||+++++.... ..+|...|.++.|++.++..|++++.|+++++||+
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred cCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 99999999999998764332 24688899999998669999999999999999999
Q ss_pred CCCcEEEEE
Q 005147 691 NQAILLLHL 699 (712)
Q Consensus 691 ~~~~~v~~~ 699 (712)
.++.....+
T Consensus 285 ~~~~~~~~l 293 (393)
T 4gq1_A 285 FANNDYNEI 293 (393)
T ss_dssp ---------
T ss_pred ccCCCCceE
Confidence 987765544
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-17 Score=173.31 Aligned_cols=194 Identities=13% Similarity=0.139 Sum_probs=146.5
Q ss_pred CCCCcccccccCCC---CCCCCccccC---------CCCCCceeeccCCCccceecccCC---CCCCcEEEEEcCCcE-E
Q 005147 492 SGRPLVRHSQLSSD---GRTSKPLVNE---------RSSINNLGSKEGYSEGRRSGWINP---FLEGLCKYLSFSKLR-V 555 (712)
Q Consensus 492 ~~~~~~~~~~~~~~---g~~~~~~~~~---------~~~~~~~~l~gh~~~~~~~~~~~~---~~~~~~~~~~~~~~~-v 555 (712)
++...++++.|+++ |..++....+ ....+...+.+|.+.+..+.|... ..++...++...++. .
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 45667889999998 4654333222 222267788999999999987431 334444444444444 4
Q ss_pred EEEccCCc-ee----cC----CCCeeEEE----EcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEE
Q 005147 556 KADLNQGD-LL----NS----SNLVCSLS----FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622 (712)
Q Consensus 556 ~~dl~~~~-~~----~h----~~~V~~i~----f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~ 622 (712)
+|++.++. .. .| ...|.++. |+|++.+|++|+.|+.|++||+++. .......|...|++
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~v~~ 214 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM--------ALRWETNIKNGVCS 214 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC--------ceeeecCCCCceEE
Confidence 59998765 22 22 34899998 7889999999999999999999762 22445678899999
Q ss_pred EEEcCC--CCCEEEEEeCCCcEEEEECCCCcEEEEec-----cCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCc
Q 005147 623 ICWNSY--IKSQIASSNFEGVVQVWDVSRSQVLTEMR-----EHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 623 v~~~p~--~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-----~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~ 694 (712)
++|+|. ++.+|++|+.||.|++||+++++++..+. +|...|++++|+| ++. +|++|+.|+.|++||++++.
T Consensus 215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCS
T ss_pred EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCc
Confidence 999994 48999999999999999999876554444 8999999999998 776 89999999999999998654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-16 Score=175.44 Aligned_cols=174 Identities=14% Similarity=0.173 Sum_probs=140.7
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEc--CCCCEEEEEeCCCcEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFD--RDGELFAAAGVNKKIK 593 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~--~~~~~lat~~~d~~I~ 593 (712)
+...+.||.+.+..+.| ..++.+...+.+....+|++.++... +|.+.|.+++|+ +++.+|++|+.|++|+
T Consensus 154 ~~~~~~~h~~~V~~l~~---~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKY---AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EEEEECCCSSCEEEEEE---CSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEEEEeCCCcCEEEEEE---cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 45677899999999999 34556555555555556999887643 699999999998 5778999999999999
Q ss_pred EEEcCCccccCccc----------------ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 005147 594 VFECDAIINENRDI----------------HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (712)
Q Consensus 594 iwD~~~~~~~~~~~----------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~ 657 (712)
+||+++........ .......+|...|.+++. +++++++|+.||.|++||+++++++.++.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 99998643211100 012345578888888854 36899999999999999999999999999
Q ss_pred cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 658 ~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|...|++++|+| ++.++++|+.|++|++||+++++++..+-
T Consensus 308 ~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 308 GHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp CCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 9999999999998 99999999999999999999998887653
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=169.98 Aligned_cols=170 Identities=12% Similarity=0.152 Sum_probs=137.8
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCc-EEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL-RVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
+....+.++||.+.+..+.| + .++...++...++ ..+|++.++... +|.+.|.+++|+|++++|++++.|+.
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~-s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKY-N--KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYS 97 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEE-C--TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred cccccEEEEEeeceEEEEEE-c--CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 34566889999999999999 3 3554444444444 455999887644 68999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC-----CcEEEEECCCCc-----------EEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE-----GVVQVWDVSRSQ-----------VLTE 655 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D-----g~V~lwD~~~~~-----------~~~~ 655 (712)
|++||+.+. ..+....+...|.+++|+| ++.+|++++.+ |.|.+||+.++. .+..
T Consensus 98 i~iwd~~~~--------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 98 IKLWDVSNG--------QCVATWKSPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EEEEETTTC--------CEEEEEECSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred EEEEECCCC--------cEEEEeecCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 999999762 2334445888999999999 69999999999 999999998653 4555
Q ss_pred eccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCC-CcEEEEE
Q 005147 656 MREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQ-AILLLHL 699 (712)
Q Consensus 656 ~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~v~~~ 699 (712)
+..|.. .+.+++|+| ++.+|++|+.|+.|++||+++ +..+..+
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 214 (369)
T 3zwl_B 169 IITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSI 214 (369)
T ss_dssp EECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEE
T ss_pred ccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEE
Confidence 667776 999999998 999999999999999999998 4555443
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=177.45 Aligned_cols=195 Identities=12% Similarity=0.152 Sum_probs=152.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
+.+|...++++.|+++| .+.....+. .......+.+|.+.+..+.| .+..++...++...++. .+|++.
T Consensus 158 ~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI-VEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp ECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-EESSSCEEEEEEETTSCEEEEECC
T ss_pred EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE-ecCCCCCEEEEEcCCCcEEEeeCC
Confidence 45788889999999887 322222221 12345678899999999999 44455444444444444 459987
Q ss_pred CCc---------------------------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE
Q 005147 561 QGD---------------------------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (712)
Q Consensus 561 ~~~---------------------------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~ 613 (712)
++. +.+|...|.++ ++++++|++|+.|+.|++||+++. ......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~ 306 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-------KCLYIL 306 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-------EEEEEE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-------cEEEEe
Confidence 653 33578888877 567899999999999999999752 223345
Q ss_pred ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 614 ~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.+|...|++++|+| ++++|++|+.||+|++||+++++++.++.+|...|.+++|+ +.+|++|+.|++|++||++++
T Consensus 307 ~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 307 SGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp CCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTC
T ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCC
Confidence 57899999999999 68999999999999999999999999999999999999997 489999999999999999998
Q ss_pred cEEEEE
Q 005147 694 ILLLHL 699 (712)
Q Consensus 694 ~~v~~~ 699 (712)
......
T Consensus 383 ~~~~~~ 388 (464)
T 3v7d_B 383 SRKFSY 388 (464)
T ss_dssp CEEEEE
T ss_pred ceeeee
Confidence 876655
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-17 Score=192.70 Aligned_cols=170 Identities=19% Similarity=0.211 Sum_probs=140.9
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.++||.+.+.++.| ++ ++...+....++.+. |++.++.. .+|.+.|.+++|+|++++|++|+.|+.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~-sp--~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDF-HP--TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEE-CS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeeecCCCceEEEEE-CC--CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 3467888888888888 33 454444444455544 88877653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|+.++ .......+|...|++++|+| ++.+|++|+.||+|++||+.++ .....+.+|...|++++|+|.++.
T Consensus 83 ~~~~~-------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 83 NYNTG-------EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred ECCCC-------cEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 99753 22334567999999999999 5899999999999999999987 778889999999999999986789
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++|+.|++|++||++++.....+..
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEec
Confidence 999999999999999998887766553
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=6e-17 Score=179.27 Aligned_cols=170 Identities=16% Similarity=0.107 Sum_probs=134.5
Q ss_pred eeeccCCCccceecccCCCCCCcE-EEEEcCCcEE-EEEcc--CCcee------cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLC-KYLSFSKLRV-KADLN--QGDLL------NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~-~~~~~~~~~v-~~dl~--~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
....+|.+.+..+.| + .++.. .+....++.+ +|++. ++... .|...|++++|+|++.+|++|+.|+.
T Consensus 96 ~~~~~~~~~v~~~~~-s--~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~ 172 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRL-T--SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGD 172 (450)
T ss_dssp ----CCCCCEEEEEE-C--TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCccCCceEEEEE-c--CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCc
Confidence 345678888888888 3 34443 2444444444 49888 65533 46789999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC---CCEEEEEeCCCcEEEEECCCCcEEEE-eccCCCcEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI---KSQIASSNFEGVVQVWDVSRSQVLTE-MREHERRVWSID 667 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~---~~~lasgs~Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~ 667 (712)
|++||+.+...... ......+|...|++++|+| + +.+|++|+.|++|++||+++++++.. +.+|...|++++
T Consensus 173 v~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 173 VYSIDINSIPEEKF---TQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EEEEETTSCCCSSC---CCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEE
T ss_pred EEEEecCCcccccc---cceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEE
Confidence 99999976322110 1113456889999999999 5 78999999999999999999998888 568999999999
Q ss_pred EecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 668 FSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 668 fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|+ ++.+|++|+.|++|++||+++++++..+-
T Consensus 249 ~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 249 CG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EC--STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred EC--CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 99 89999999999999999999999887764
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-17 Score=174.13 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=125.4
Q ss_pred cceecccCCCCCCc-EEEEEcC-CcEEE-EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 531 GRRSGWINPFLEGL-CKYLSFS-KLRVK-ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~-~~~v~-~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
+..+.| +.||. +.+++.+ ++.++ |++.++... .|.+.|.+|+|+|||+++++++.+ .+.+|+..++..
T Consensus 136 ~~~v~f---SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~-- 209 (365)
T 4h5i_A 136 TKLVYI---SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC-- 209 (365)
T ss_dssp EEEEEE---CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE--
T ss_pred EEEEEE---cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc--
Confidence 445566 33443 3344432 34444 888877644 578889999999999999998855 566676654211
Q ss_pred cccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC----cEEEEECCCCcE----EEEeccCCCcEEEEEEecCCCCEE
Q 005147 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG----VVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 605 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg----~V~lwD~~~~~~----~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
........|...|.+|+|+| ++.++++++.|+ .+.+||+..... ...+.+|...|++++|+| ++.+|
T Consensus 210 ---~~~~~~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~l 284 (365)
T 4h5i_A 210 ---IARKTDFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELA 284 (365)
T ss_dssp ---EEEECCCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEE
T ss_pred ---eeeeecCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCce
Confidence 11122346788899999999 699999999887 688999887653 456789999999999998 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEeceeeccC
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLVDVSFETK 707 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~ 707 (712)
|+||.|++|+|||+++++++.+++.+|....
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 9999999999999999999999887765433
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=199.74 Aligned_cols=171 Identities=17% Similarity=0.226 Sum_probs=145.5
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
...+.+.||.+.+..+.| +.++...++...++.+ +|++.++.. .+|.+.|.+++|+|++++||+|+.|++|+
T Consensus 606 ~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACF---SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp CCSEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cceEEEecccccEEEEEE---CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 456788999999999999 4455545554455554 599988764 36999999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
|||+.++ .......+|...|++++|+|. +..++++|+.||.|++||+++++++.++.+|...|++++|+| +
T Consensus 683 vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~ 754 (1249)
T 3sfz_A 683 IWDSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-D 754 (1249)
T ss_dssp EEETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-S
T ss_pred EEECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-C
Confidence 9999763 223345689999999999985 355899999999999999999999999999999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.+|++|+.|++|++||++++.....+.
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEECCCeEEEEeCCCCcccceec
Confidence 9999999999999999999988776653
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.73 E-value=9.8e-17 Score=190.44 Aligned_cols=201 Identities=13% Similarity=0.162 Sum_probs=160.4
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...+++..|+|||..+++...+. .......+.+|.+.+..+.| ..++...+....++.+. |++.
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEGG
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEE---eCCCCEEEEEcCCCEEEEEECC
Confidence 346777899999999998764433222 22345678899999999999 44554444455555554 9998
Q ss_pred CC-c----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEE
Q 005147 561 QG-D----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQI 633 (712)
Q Consensus 561 ~~-~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~l 633 (712)
++ . +.+|...|.+++|+| +++.|++|+.|++|++||+++... .......+...+.+++|+|. ++.+|
T Consensus 128 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC------SEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc------eeEEecCCCCCEEEEEEEECCCCCEE
Confidence 76 2 346899999999999 889999999999999999965211 11223344588999999982 48899
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|+.||.|++||+++++++.++.+|...|++++|+| ++.+|++|+.||.|++||+.++..+..+.
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 9999999999999999999999999999999999998 89999999999999999999988876654
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-16 Score=171.03 Aligned_cols=164 Identities=18% Similarity=0.245 Sum_probs=135.8
Q ss_pred ccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~ 599 (712)
.+|...+..+.| ++ ++...+.. .+....+|++.+++.. +|...|.+++| ++++|++|+.|+.|++||++.
T Consensus 131 ~~~~~~v~~v~~-s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 131 TDESTYVASVKW-SH--DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CCTTCCEEEEEE-CT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred cCCCCCEEEEEE-CC--CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 348889999999 43 54444444 4444455999877643 68999999999 467999999999999999974
Q ss_pred ccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEE
Q 005147 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sg 679 (712)
. .........|...|.+++|+| ++.+|++|+.||.|++||+++++++.++..|...|.+++|+|....++++|
T Consensus 206 ~------~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 206 A------NHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp S------SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred C------cceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 2 122345567999999999999 699999999999999999999999999999999999999999666888887
Q ss_pred E--CCCcEEEEeCCCCcEEEEEe
Q 005147 680 S--DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 680 s--~D~~v~lWd~~~~~~v~~~~ 700 (712)
+ .|+.|++||+++++++..+-
T Consensus 279 ~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 279 GGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp CCTTTCEEEEEETTTCCEEEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEe
Confidence 6 79999999999999887663
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-16 Score=174.62 Aligned_cols=190 Identities=15% Similarity=0.093 Sum_probs=146.6
Q ss_pred CCCCCcccccccCCCCCCC-CccccCC----------CCCCceeec--cCCCccceecccCCCCCCcEEEEEcCCcEEE-
Q 005147 491 PSGRPLVRHSQLSSDGRTS-KPLVNER----------SSINNLGSK--EGYSEGRRSGWINPFLEGLCKYLSFSKLRVK- 556 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~-~~~~~~~----------~~~~~~~l~--gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~- 556 (712)
+++...++++.|+|||..+ ++...+. .......+. +|...+..+.| ..++...+....++.+.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~---sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI---AEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE---cCCCCEEEEEeCCCcEEE
Confidence 4566689999999999985 3332221 112223333 67788889999 34554445444556655
Q ss_pred EEccCCc--------eecCCCCeeEEEEcCC---CCEEEEEeCCCcEEEEEcCCccccCcccccceE-EecCCCCeEEEE
Q 005147 557 ADLNQGD--------LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSIC 624 (712)
Q Consensus 557 ~dl~~~~--------~~~h~~~V~~i~f~~~---~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~ 624 (712)
|++.++. +.+|.+.|.+++|+|+ +.+|++|+.|++|++||+++.. .... ..+|...|++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-------IVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------CEEEECCCCSSCEEEEE
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------eeeeeecCCCCceEEEE
Confidence 8887653 3468999999999999 8999999999999999997521 1222 347899999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-------------------------CCcEEEEEEecCCCCEEEEE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-------------------------ERRVWSIDFSSADPTLLASG 679 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-------------------------~~~v~sv~fsp~~~~~l~sg 679 (712)
|+ ++.+|++|+.|++|+|||+++++++.++..| ...|.+++|+| ++.+|+++
T Consensus 249 ~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~ 325 (450)
T 2vdu_B 249 CG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFF 325 (450)
T ss_dssp EC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-SSSEEEEE
T ss_pred EC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-CCCEEEEE
Confidence 99 6999999999999999999999998888632 45799999998 89999999
Q ss_pred E-CCCcEEEEeC--CCC
Q 005147 680 S-DDGSVKLWSI--NQA 693 (712)
Q Consensus 680 s-~D~~v~lWd~--~~~ 693 (712)
+ .|+.|+|||+ .++
T Consensus 326 ~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQK 342 (450)
T ss_dssp ETTCSEEEEEEECSSST
T ss_pred ECCCCeEEEEEeccCCC
Confidence 9 8999999999 555
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=188.32 Aligned_cols=165 Identities=14% Similarity=0.170 Sum_probs=129.9
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCC--c----eecCCCCeeEEEEcCC--CCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQG--D----LLNSSNLVCSLSFDRD--GELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~--~----~~~h~~~V~~i~f~~~--~~~lat~~~d~~I 592 (712)
..+.||.+.|..+.| ++ ++...++...++.+ +|++..+ . +.+|.+.|.+++|+|+ +++|++|+.||.|
T Consensus 3 ~~l~gH~~~V~~l~~-s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVL-DY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECC-CS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEE-CC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 467899999999999 43 44333444444554 4998733 2 3479999999999987 9999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fs 669 (712)
++||+.++. .........|...|++++|+|.. +++|++|+.||.|++||++++ .....+.+|...|++++|+
T Consensus 80 ~vwd~~~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 80 LIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp EEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred EEEECCCCc-----ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 999997521 12334456789999999999932 889999999999999999987 3456778899999999999
Q ss_pred cC------------CCCEEEEEECCCcEEEEeCCCCc
Q 005147 670 SA------------DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 670 p~------------~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|. ++.++++|+.||+|++||++++.
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTT
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCc
Confidence 85 58999999999999999998875
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-15 Score=167.70 Aligned_cols=214 Identities=17% Similarity=0.256 Sum_probs=155.8
Q ss_pred hhhhhHhHHHHHHHhhccCCC----CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecc
Q 005147 469 RLMKNFKKLESAYFLTRCRPV----KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGW 536 (712)
Q Consensus 469 ~~~~~~~~l~~~y~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~ 536 (712)
++......++......+.... ..++...+.+..+ ||..++....+. .......+.||.+.+..+.|
T Consensus 104 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 181 (435)
T 1p22_A 104 KIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 181 (435)
T ss_dssp HHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC
T ss_pred hhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE
Confidence 334444455555444333321 1234445666555 565443322221 12345678899999998888
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceE
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
.+..+...+.+....+|++.+++.. +|...|.+++|+ +++|++|+.|+.|++||+++... ......
T Consensus 182 ----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~----~~~~~~ 251 (435)
T 1p22_A 182 ----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTD----ITLRRV 251 (435)
T ss_dssp ----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSC----CEEEEE
T ss_pred ----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCC----ceeeeE
Confidence 3345555555544555999887644 689999999997 46999999999999999976321 111245
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
..+|...|.+++|+ +++|++|+.||.|++||+++++++.++.+|...|.+++|+ +.++++|+.|++|++||+++
T Consensus 252 ~~~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 252 LVGHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTT
T ss_pred ecCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCC
Confidence 56889999999994 6899999999999999999999999999999999999996 58999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++++..+.
T Consensus 326 ~~~~~~~~ 333 (435)
T 1p22_A 326 GACLRVLE 333 (435)
T ss_dssp CCEEEEEC
T ss_pred CCEEEEEe
Confidence 98886654
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=168.89 Aligned_cols=161 Identities=9% Similarity=-0.008 Sum_probs=120.4
Q ss_pred ccCCCccceecccCCCCCCcEEE-EEcCCcEEEEEccCCcee-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKY-LSFSKLRVKADLNQGDLL-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~dl~~~~~~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+|.+.+..+.| ++..++...+ .+.+....+|+++++... .|...|.+++|+|++.+||+|+.|+.|++||++
T Consensus 122 ~~~~~~v~~~~~-~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 122 VDSANEIIYMYG-HNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCCSSCEEEEEC-CC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred cCCCCCEEEEEc-CCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 367788999999 5533554444 444444455999988764 356689999999999999999999999999998
Q ss_pred CccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc---CCCcEE--EEEEecCC
Q 005147 599 AIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE---HERRVW--SIDFSSAD 672 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~---H~~~v~--sv~fsp~~ 672 (712)
+.... +..... |...|++|+|+| ++.+|++|+ |++|+|||+++++++.++.. |...+. +++|+| +
T Consensus 201 ~~~~~------~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 271 (343)
T 3lrv_A 201 SPDQA------SSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-S 271 (343)
T ss_dssp CTTSC------CEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-T
T ss_pred CCCCC------ccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC-C
Confidence 63211 122334 899999999999 699999999 55999999999877655443 545554 699998 9
Q ss_pred CCEEEEEEC-CCcEEEEeCCCCcE
Q 005147 673 PTLLASGSD-DGSVKLWSINQAIL 695 (712)
Q Consensus 673 ~~~l~sgs~-D~~v~lWd~~~~~~ 695 (712)
+.+|++|+. |+.|+||++.+...
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEecCCCCcEEEEEEccccc
Confidence 999999998 99999999865543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-16 Score=193.76 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=158.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
..+|...++++.|||||..+++...+. .......+.+|.+.+..+.| +.++...++...++.+. |++.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF---SSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEE---ecCCCEEEEEeCCCeEEEEECC
Confidence 457888999999999998764443322 22345678899999999999 34554444444555554 9999
Q ss_pred CCcee----cCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++++. +|...|.+++|+| ++.++++|+.|+.|++||++++ .......+|...|++++|+| ++.+|+
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~sp-~~~~l~ 759 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-------ECRNTMFGHTNSVNHCRFSP-DDELLA 759 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-------SEEEEECCCSSCEEEEEECS-STTEEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-------chhheecCCCCCEEEEEEec-CCCEEE
Confidence 88754 6999999999999 4569999999999999999763 23344568999999999999 699999
Q ss_pred EEeCCCcEEEEECCCCcEEEEe-------------------------------------------------------ccC
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEM-------------------------------------------------------REH 659 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~-------------------------------------------------------~~H 659 (712)
+|+.||+|++||+++++....+ .+|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 9999999999999877544332 268
Q ss_pred CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
...|++++|+| ++.++++|+.|+.|++||+.++..+..+
T Consensus 840 ~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 840 HSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp SSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred CCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeec
Confidence 88999999998 9999999999999999999998877654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=178.17 Aligned_cols=199 Identities=8% Similarity=0.097 Sum_probs=155.9
Q ss_pred CCCCCCc-ccccccCC--CCCCCCccccCCC----------------CCCceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 490 KPSGRPL-VRHSQLSS--DGRTSKPLVNERS----------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 490 ~~~~~~~-~~~~~~~~--~g~~~~~~~~~~~----------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
+.+|... +++..|+| ||..+++...+.. ......+.+|...+..+.| + .++...+...
T Consensus 59 ~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s--~~~~~l~~~~ 135 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW-D--FEGRRLCVVG 135 (615)
T ss_dssp ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE-C--TTSSEEEEEE
T ss_pred EecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEE-e--CCCCEEEEec
Confidence 4567778 99999999 9987644433321 1233467789999999999 3 4444444433
Q ss_pred CC----cEEE-EEccC--CceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC---C
Q 005147 551 SK----LRVK-ADLNQ--GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS---K 619 (712)
Q Consensus 551 ~~----~~v~-~dl~~--~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~---~ 619 (712)
.+ +.+. |+... ..+.+|...|.+++|+|++. +|++|+.|+.|++||+.+. ........|.. .
T Consensus 136 ~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-------~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 136 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-------KFSASDRTHHKQGSF 208 (615)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-------EEEEEECSSSCTTCC
T ss_pred cCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-------ceeeeecccCCCCce
Confidence 33 3444 65321 12347899999999999998 8999999999999998652 22233456777 8
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-c---cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-R---EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-~---~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|++++|+|.++++|++|+.||.|++||+++++.+..+ . .|...|++++|+ ++.+|++++.|+.|++||+++++.
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999943899999999999999999999999999 6 899999999999 899999999999999999999988
Q ss_pred EEEEe
Q 005147 696 LLHLV 700 (712)
Q Consensus 696 v~~~~ 700 (712)
+..+.
T Consensus 287 ~~~~~ 291 (615)
T 1pgu_A 287 VQKWT 291 (615)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77664
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-16 Score=169.26 Aligned_cols=159 Identities=9% Similarity=0.048 Sum_probs=131.6
Q ss_pred CceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
+...+.+|...+..+.| ++ ++ .+.+.+.+....+|++.++.. .+|...|.+++|+|++ +|++++.|+.|++
T Consensus 239 ~~~~~~~~~~~i~~~~~-~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 239 PTGKLIGHHGPISVLEF-ND--TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRL 314 (425)
T ss_dssp CSEEECCCSSCEEEEEE-ET--TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEE
T ss_pred eeeeeccCCCceEEEEE-CC--CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEE
Confidence 44567788888888988 33 44 344444444445599887653 3589999999999999 9999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc--------------------EEE
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--------------------VLT 654 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~--------------------~~~ 654 (712)
||+++. ........|...|++++|+| ++.+|++|+.||.|++||++++. ++.
T Consensus 315 ~d~~~~-------~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (425)
T 1r5m_A 315 WSLKQN-------TLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA 386 (425)
T ss_dssp EETTTT-------EEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEE
T ss_pred EECCCC-------cEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh
Confidence 999752 22334456889999999999 59999999999999999999888 899
Q ss_pred EeccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 655 EMREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 655 ~~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+.+|.. .|++++|+| ++.+|++|+.|+.|++||+.
T Consensus 387 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 387 SYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEEEECC
T ss_pred hhcCcccCCceEEEEccC-CCceEEEEecCceEEEEeec
Confidence 9999977 999999998 89999999999999999986
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=173.15 Aligned_cols=178 Identities=11% Similarity=0.043 Sum_probs=117.3
Q ss_pred eeeccCCCccceecccCCC------CCCcEEEEEcCCcE-EEEEccCCc----eecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 522 LGSKEGYSEGRRSGWINPF------LEGLCKYLSFSKLR-VKADLNQGD----LLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~------~~~~~~~~~~~~~~-v~~dl~~~~----~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
..+.||.+.|..++| +|. .|+.+.+...++.. .+||+.++. +.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 130 ~~~~gH~~~v~~v~~-~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDI-ADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp CTTTSCSSCEEEEEE-EEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred cccCCCCCceEEEEE-ccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 457899999999999 442 24444444444444 459998654 34789999999999987 489999999
Q ss_pred CcEEEEEcCCccccCccc------------------ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc
Q 005147 590 KKIKVFECDAIINENRDI------------------HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ 651 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~------------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~ 651 (712)
++|++||+++........ .......+|...+.++.|++.++..|++++.|++|++||+.+++
T Consensus 209 ~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 999999998743211100 00112246788899999986689999999999999999999988
Q ss_pred EEEEeccCCCcEEEEEEec-------------------CCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 652 VLTEMREHERRVWSIDFSS-------------------ADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 652 ~~~~~~~H~~~v~sv~fsp-------------------~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
....+..|...++.+.+.| .++.++++|+.|++|+|||+.++..+..+.
T Consensus 289 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~ 356 (393)
T 4gq1_A 289 DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI 356 (393)
T ss_dssp ---------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE
T ss_pred CCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec
Confidence 8888877777766665543 134478889999999999999998877655
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.8e-15 Score=154.69 Aligned_cols=161 Identities=15% Similarity=0.188 Sum_probs=131.7
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.+...++||.+.+..+.| ..+..+...+.+....+|++.++... .|...|.+++|+|++.+|++|+.|+.|++
T Consensus 9 ~~~~~l~~h~~~v~~~~~---~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA---VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE---EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHhhCCCCCcEEEEe---cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 345678999999999988 23445554444444445999876533 68999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||+..... .........|...|.+++|+ +++|++|+.||.|++|| .++.+..+..|...|++++|+|.++.
T Consensus 86 ~~~~~~~~----~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 86 VPLFATSG----EDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp EETTCCTT----SCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTT
T ss_pred EEeeecCC----CCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCC
Confidence 99975321 12233456789999999994 57999999999999999 78889999999999999999988899
Q ss_pred EEEEEECCCcEEEEeCC
Q 005147 675 LLASGSDDGSVKLWSIN 691 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~ 691 (712)
++++|+.|+.|++||..
T Consensus 157 ~l~~~~~d~~i~i~d~~ 173 (313)
T 3odt_A 157 KFLTASADKTIKLWQND 173 (313)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEECCCCEEEEecC
Confidence 99999999999999943
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-16 Score=164.73 Aligned_cols=154 Identities=10% Similarity=0.103 Sum_probs=123.4
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc-------eecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEE
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD-------LLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVF 595 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~-------~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iw 595 (712)
.+|.+.+..+.| ++ ++...++...++.+ +|++..+. ..+|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 8 ~~h~~~v~~~~~-s~--~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 8 QAPKDYISDIKI-IP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SCCSSCEEEEEE-EG--GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred cCCCCcEEEEEE-cC--CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 467777777877 33 33333333333443 48877654 236899999999999999 99999999999999
Q ss_pred Ec-CCccccCcccccceEEec--CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC---------CcEEEEeccCCCcE
Q 005147 596 EC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR---------SQVLTEMREHERRV 663 (712)
Q Consensus 596 D~-~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~---------~~~~~~~~~H~~~v 663 (712)
|+ .+.. .....+ |...|.+++|+| +++|++++.||.|++||+++ ++++.++. |...|
T Consensus 85 d~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v 153 (342)
T 1yfq_A 85 DLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI 153 (342)
T ss_dssp CSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE
T ss_pred EeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce
Confidence 99 6531 234456 899999999999 88999999999999999998 77777777 99999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCC-CcE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQ-AIL 695 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~ 695 (712)
++++|+| ++ +++|+.|+.|++||+++ +..
T Consensus 154 ~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 154 FTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp EEEEECS-SE--EEEEESTTEEEEEESSCCTTC
T ss_pred EEEEecC-Cc--EEEEeCCCeEEEEECCccccc
Confidence 9999997 44 99999999999999998 553
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=166.20 Aligned_cols=183 Identities=18% Similarity=0.260 Sum_probs=144.1
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG 562 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~ 562 (712)
.+|...+++..| ||..+++...+. .......+.+|...+..+.| + ++.+...+.+....+|++.++
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~---~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-N---NGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC-C---TTEEEEEETTSCEEEEECSSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE-c---CCEEEEeeCCCcEEEEeCCCC
Confidence 456667777776 554432222221 12345678899999999998 2 456666666555566999865
Q ss_pred c-------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 563 D-------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 563 ~-------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
. +.+|...|.+++| ++++|++|+.|+.|++||+++. .......+|...|.+++|+ ++++++
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~ 311 (435)
T 1p22_A 244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-------EFVRTLNGHKRGIACLQYR---DRLVVS 311 (435)
T ss_dssp SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEEE---TTEEEE
T ss_pred CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-------cEEEEEcCCCCcEEEEEeC---CCEEEE
Confidence 4 2368999999999 7889999999999999999763 2223445788999999995 579999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 636 SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|+.||.|++||+++++++.++.+|...|++++| ++.+|++|+.||.|++||++++.
T Consensus 312 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 312 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999999999999999999999998 57899999999999999997665
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.9e-16 Score=170.77 Aligned_cols=131 Identities=17% Similarity=0.192 Sum_probs=107.6
Q ss_pred cCCCCeeEEEEcCCCCEEE----EEeCCCcEEEEEcCCccccCccc----ccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 566 NSSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDI----HYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~la----t~~~d~~I~iwD~~~~~~~~~~~----~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+.+.|.+++|+|++++|| +|+.|+.|+|||+++........ .......+|...|.+|+|+|..+++||+|+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 78899999999997631111000 011223458899999999996689999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.||+|+|||++++..+....+|...|++++|+| ++++|++|+.|++|++||++ ++....
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~ 228 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKV 228 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-Cccccc
Confidence 999999999999988877888999999999998 89999999999999999998 554433
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.7e-15 Score=162.25 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=147.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+.. .++++|..++....+. .......+.+|.+.+..+.| + +..+...+.+....+|++.+
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~---~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-R---DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEE-E---TTEEEEEETTSCEEEEETTT
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEe-c---CCEEEEEeCCCeEEEEECCc
Confidence 5577765432 2455666543332221 22345678899999998888 2 44555555555555599887
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
++.. +|...|.++.|+ ++.+++|+.|++|++||+++. .......+|...|.+++| +++++++|+
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~-------~~~~~~~~~~~~v~~~~~---~~~~l~~~~ 256 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG-------QCLHVLMGHVAAVRCVQY---DGRRVVSGA 256 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC-------CEEEEEECCSSCEEEEEE---CSSCEEEEE
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC-------cEEEEEcCCcccEEEEEE---CCCEEEEEc
Confidence 7643 689999999995 678999999999999999752 223345678999999999 367999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++.++.+|...|++++| ++.++++|+.|+.|++||+++++.+..+.
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 9999999999999999999999999999999 57899999999999999999998886653
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=161.08 Aligned_cols=170 Identities=9% Similarity=0.107 Sum_probs=124.9
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCceec--CCCCeeEEEEcCCCCEE-EEEeCCCcEEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN--SSNLVCSLSFDRDGELF-AAAGVNKKIKVFE 596 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~--h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD 596 (712)
|...+.+|.+.+..+.| +.+|.+.+...+++..+|++..+.... +...+..++|.++++.+ ++++.|++|+|||
T Consensus 11 ~~~~~~~h~~~V~~v~f---s~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEF---NQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEE---CTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEE---CCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 33456899999999999 567776666666666679988766442 33468889999988877 5677889999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCC----------------C------------------CEEEE--EeCCC
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYI----------------K------------------SQIAS--SNFEG 640 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----------------~------------------~~las--gs~Dg 640 (712)
..++. .+....+...|.+++|++.. + .++|. |+.||
T Consensus 88 ~~~~~--------~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g 159 (355)
T 3vu4_A 88 DVKKQ--------DVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLG 159 (355)
T ss_dssp TTTTE--------EEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTT
T ss_pred CCCCc--------EEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCc
Confidence 97631 23344456677777776520 1 34555 57899
Q ss_pred cEEEEECCCCc---------------E-EEEeccCCCcEEEEEEecCCCCEEEEEECCCc-EEEEeCCCCcEEEEEec
Q 005147 641 VVQVWDVSRSQ---------------V-LTEMREHERRVWSIDFSSADPTLLASGSDDGS-VKLWSINQAILLLHLVD 701 (712)
Q Consensus 641 ~V~lwD~~~~~---------------~-~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~-v~lWd~~~~~~v~~~~~ 701 (712)
.|++||++++. + +.++.+|...|++++|+| ++.+|||||.|++ |+|||+++++++.++..
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 99999999865 2 788999999999999998 9999999999999 99999999999987763
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.65 E-value=9.2e-15 Score=160.11 Aligned_cols=149 Identities=17% Similarity=0.334 Sum_probs=123.8
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.-++| + ..+++++. .++...+|+..+|++. +|...|++|+|+|+|++||+|+.|++|+|||+.+.
T Consensus 109 ~~l~w-S--~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~----- 179 (420)
T 4gga_A 109 NLVDW-S--SGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ----- 179 (420)
T ss_dssp BCEEE-C--TTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----
T ss_pred eeEEE-C--CCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC-----
Confidence 34778 3 45665554 4555555999887643 57889999999999999999999999999999763
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
.......+|...+.+++|++ .+|++|+.|+.+.+||.+.. ..+.++.+|...+..+.|+| ++.++++++.|+.
T Consensus 180 --~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~ 253 (420)
T 4gga_A 180 --KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNL 253 (420)
T ss_dssp --EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred --cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeecccc
Confidence 22344567899999999975 69999999999999999875 56788999999999999998 9999999999999
Q ss_pred EEEEeCCCCcE
Q 005147 685 VKLWSINQAIL 695 (712)
Q Consensus 685 v~lWd~~~~~~ 695 (712)
|++||+.+++.
T Consensus 254 v~i~~~~~~~~ 264 (420)
T 4gga_A 254 VNVWPSAPGEG 264 (420)
T ss_dssp EEEEESSCCSS
T ss_pred ceEEeeccccc
Confidence 99999987753
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-15 Score=153.74 Aligned_cols=149 Identities=11% Similarity=0.023 Sum_probs=108.7
Q ss_pred CCCcEEEEEc--CCcEEE-EEcc-CCce----ecCCCCeeEEEEcC---CCCEEEEEeCCCcEEEEEcCCccccCccccc
Q 005147 541 LEGLCKYLSF--SKLRVK-ADLN-QGDL----LNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (712)
Q Consensus 541 ~~~~~~~~~~--~~~~v~-~dl~-~~~~----~~h~~~V~~i~f~~---~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~ 609 (712)
.++.+...+. .+..|. |++. .|+. .+|...|..++|++ ++++||+||.|++|||||+.++..
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~------- 215 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL------- 215 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE-------
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE-------
Confidence 3455544433 234444 7773 3543 36899999999999 779999999999999999987432
Q ss_pred ceEEecC---CCCeEEEEEcCCCCCEE------------EEEeCCCcEEEEECCCCcEEEEe-----ccCCCcEEEEEEe
Q 005147 610 PVVEMAS---RSKLSSICWNSYIKSQI------------ASSNFEGVVQVWDVSRSQVLTEM-----REHERRVWSIDFS 669 (712)
Q Consensus 610 ~~~~~~~---~~~v~~v~~~p~~~~~l------------asgs~Dg~V~lwD~~~~~~~~~~-----~~H~~~v~sv~fs 669 (712)
.....+| ...+.+++|+| ++.++ +||+.|++|++||..+++.+.++ .+|...+.+.+++
T Consensus 216 l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s 294 (356)
T 2w18_A 216 LKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK 294 (356)
T ss_dssp EEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE
T ss_pred EEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC
Confidence 1122222 34677889999 57665 77899999999999999988776 4787776666654
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.++|+||.|++|+|||+.+++++.++-
T Consensus 295 ---g~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 295 ---DHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp ---TTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred ---CCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 7899999999999999999999987653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-17 Score=187.72 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=75.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+.+.. ++ ......+++||+. |++|.+++.. ++.|+.||+.||+|||++||+
T Consensus 387 ~~E~~il~~l~h~nIv~~~~-~~---~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIi 453 (540)
T 3en9_A 387 AREARYLALVKDFGIPAPYI-FD---VDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVI 453 (540)
T ss_dssp HHHHHHHHHGGGGTCCCCCE-EE---EETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCceEE-EE---EeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCc
Confidence 45667888999999994333 11 1233457777774 8999999954 568999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCC
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDS 132 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~ 132 (712)
||||||+|||++. .+||+|||+++..
T Consensus 454 HrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 454 HNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp CTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred cCCCCHHHEEECC--eEEEEECccCEEC
Confidence 9999999999988 9999999998654
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-14 Score=151.15 Aligned_cols=148 Identities=16% Similarity=0.322 Sum_probs=122.1
Q ss_pred eecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc
Q 005147 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~ 606 (712)
.++| +.++++++. .++...+||+.++++. +|...|++++|+|++++||+|+.|++|++||++++
T Consensus 30 ~l~W---S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~------ 99 (318)
T 4ggc_A 30 LVDW---SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------ 99 (318)
T ss_dssp CEEE---CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT------
T ss_pred EEEE---CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc------
Confidence 4678 345665554 4544445999887643 57889999999999999999999999999999763
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcE
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSV 685 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v 685 (712)
.......+|...+.++++. +..+++|+.++.+.+|+..+. ..+..+.+|...+.++.|++ ++.+|++|+.|++|
T Consensus 100 -~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 100 -KRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLV 174 (318)
T ss_dssp -EEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred -eeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcce
Confidence 2233456788888887776 469999999999999999876 56788999999999999997 89999999999999
Q ss_pred EEEeCCCCcE
Q 005147 686 KLWSINQAIL 695 (712)
Q Consensus 686 ~lWd~~~~~~ 695 (712)
++||+++++.
T Consensus 175 ~iwd~~~~~~ 184 (318)
T 4ggc_A 175 NVWPSAPGEG 184 (318)
T ss_dssp EEEESSCBTT
T ss_pred eEEECCCCcc
Confidence 9999998764
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=4e-14 Score=155.98 Aligned_cols=189 Identities=19% Similarity=0.256 Sum_probs=145.5
Q ss_pred CCCCCCcccccccCCCCCCCCccccC--------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE--------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+.+..+++ ..+.....+ ....+...+.+|...+..+.| ....+.+.+.+....+|++++
T Consensus 195 ~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 195 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp ECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE----CSSCEEEEETTSCEEEEEGGG
T ss_pred ECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE----CCCEEEEEcCCCEEEEEECCC
Confidence 345666677766642 222111111 112345677899999988888 334555555555555599887
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+... +|...|.++.| ++.++++|+.|+.|++||+++. .......+|...+.+++++ +++|++|+
T Consensus 269 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 336 (445)
T 2ovr_B 269 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELK---DNILVSGN 336 (445)
T ss_dssp TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEE---TTEEEEEE
T ss_pred CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC-------CEEEEEcCCcccEEEEEEe---CCEEEEEe
Confidence 7643 68999999999 7899999999999999999763 2223445788889999886 46999999
Q ss_pred CCCcEEEEECCCCcEEEEecc---CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMRE---HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~---H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|++||+++++++.++.. |...|++++|+ +.+|++|+.||.|++||+++++.+..+
T Consensus 337 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 999999999999999999986 88999999996 589999999999999999999988877
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=159.14 Aligned_cols=118 Identities=15% Similarity=0.237 Sum_probs=95.9
Q ss_pred cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 ~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
+|...|.+++|+|+ +++||+|+.|++|++||+++. .......+|...|++++|+| ++++|++|+.||+|++
T Consensus 147 ~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-------~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~i 218 (434)
T 2oit_A 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-------VKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQ 218 (434)
T ss_dssp SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-------EEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEE
T ss_pred CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-------cceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEE
Confidence 58999999999997 889999999999999999763 12234556888999999999 5999999999999999
Q ss_pred EECCCCcEEEEeccCC-------CcEEEEEEecCCCCEEEE-EECCCc------EEEEeCCCC
Q 005147 645 WDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLAS-GSDDGS------VKLWSINQA 693 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~-------~~v~sv~fsp~~~~~l~s-gs~D~~------v~lWd~~~~ 693 (712)
||++ ++...++..|. ..|.+++|++ ++.++++ ++.||. +++|+++..
T Consensus 219 wd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 219 YLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999 66666665443 3899999998 6666544 445543 899999865
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=4.9e-13 Score=144.04 Aligned_cols=190 Identities=12% Similarity=0.027 Sum_probs=138.8
Q ss_pred cccccccCCCCCCCCccccC-C--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce
Q 005147 496 LVRHSQLSSDGRTSKPLVNE-R--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~-~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~ 564 (712)
.+.+..|+|||..+.+.... . .......+.. ...+.++.| ..++. +.+....++.+. |++.+++.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~---s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLAL---SPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEE---CCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 67889999999865222211 1 1111222333 345677888 34443 435555556655 99988765
Q ss_pred e---cCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---
Q 005147 565 L---NSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 637 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--- 637 (712)
. .+...+.+++|+|+++.+ ++++.++.|++||+++. .......+...+.+++|+| ++.+|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~ 221 (391)
T 1l0q_A 151 INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--------SVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDK 221 (391)
T ss_dssp EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSEEEEEEECT-TSSEEEEEEECS
T ss_pred EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--------eEEEEEecCCCccceEECC-CCCEEEEEecCc
Confidence 4 235677999999999876 67788999999999762 2233445667899999999 588888877
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++.|.+||+.+++.+..+..|. .+.+++|+| ++.++ ++++.|+.|++||+.+++.+..+.
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 79999999999999999988765 578999998 77765 788899999999999998877654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.6e-12 Score=140.05 Aligned_cols=190 Identities=10% Similarity=0.057 Sum_probs=137.5
Q ss_pred cccccccCCCCCCCCccc-cCC--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce
Q 005147 496 LVRHSQLSSDGRTSKPLV-NER--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~-~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~ 564 (712)
.++++.|++||..+.+.. .+. .......+..|. .+.++.| ..++. +.+....++.+. |++.+++.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~---spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV---SPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEE---CCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 367889999998652111 111 111222333333 6778888 33444 445555555555 99988765
Q ss_pred e---cCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCC
Q 005147 565 L---NSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFE 639 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~D 639 (712)
. .+...+.+++|+|+++.+ ++++.|+.|++||+.+.. ..........+.+++|+|. +..| ++++.|
T Consensus 109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~ 179 (391)
T 1l0q_A 109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--------VINTVSVGRSPKGIAVTPD-GTKVYVANFDS 179 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--------EEEEEECCSSEEEEEECTT-SSEEEEEETTT
T ss_pred EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEecCCCcceEEECCC-CCEEEEEeCCC
Confidence 4 356678999999999976 788889999999997521 2233344567899999995 6655 788899
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCCCCcEEEEEe
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS---DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|.+||+++++.+..+. |...+.+++|+| ++.++++++ .|+.|++||+++++.+..+-
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 999999999999887776 567899999998 888888887 79999999999988776554
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.4e-13 Score=147.43 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=118.0
Q ss_pred eecccCCCCCCcEEEEEcCCcEE-EEEccCCce---------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 533 RSGWINPFLEGLCKYLSFSKLRV-KADLNQGDL---------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~---------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
.+.| ++ ++.+.+....++.+ +|++.+++. .+|.+.|.+++|++++.++++++.|+.|++||+++..
T Consensus 127 ~~~~-s~--~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~- 202 (433)
T 3bws_A 127 SVRF-ID--NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA- 202 (433)
T ss_dssp CCEE-SS--SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC-
T ss_pred EEEE-eC--CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce-
Confidence 5555 33 44444444444433 366665543 3678899999999999999999999999999997521
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE-
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS- 680 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs- 680 (712)
.......|...+.+++|+|. +..+ ++++.|+.|.+||+++++.+..+..+ ..+.+++|+| ++.++++++
T Consensus 203 ------~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~ 273 (433)
T 3bws_A 203 ------YKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQF 273 (433)
T ss_dssp ------EEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEE
T ss_pred ------EEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEEC
Confidence 12233467889999999995 6666 56668999999999999998888764 5699999998 888888888
Q ss_pred -------CCCcEEEEeCCCCcEEEEE
Q 005147 681 -------DDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 681 -------~D~~v~lWd~~~~~~v~~~ 699 (712)
.|+.|++||+++++.+..+
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeec
Confidence 5899999999998776554
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.4e-13 Score=143.86 Aligned_cols=196 Identities=10% Similarity=0.015 Sum_probs=143.9
Q ss_pred CCCCcccccccCCCCCCCCccccC--------CCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccC
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE--------RSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQ 561 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~ 561 (712)
++...+.+..|+++|..+.....+ ........+.+|...+..+.| ..++. +.+....++.+. |++++
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLY---DPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEE---ETTTTEEEEEETTTTEEEEEETTT
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEE---cCCCCEEEEEecCCCcEEEEECCC
Confidence 455567778888877644222111 112234456688888888888 33443 434554555555 99988
Q ss_pred Ccee---cCCCCeeEEEEcCCCCEEEEEe--------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 562 GDLL---NSSNLVCSLSFDRDGELFAAAG--------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 562 ~~~~---~h~~~V~~i~f~~~~~~lat~~--------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
++.. .+...+.+++|+|+++++++++ .|+.|++||+++. .......+...+.+++|+|...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 244 KLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--------KLIDTIGPPGNKRHIVSGNTEN 315 (433)
T ss_dssp TEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--------EEEEEEEEEECEEEEEECSSTT
T ss_pred CcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--------cEEeeccCCCCcceEEECCCCC
Confidence 7654 3456699999999999999988 4889999999753 1233345556889999999533
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC---------------CCcEEEEeCCCCcE
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD---------------DGSVKLWSINQAIL 695 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~---------------D~~v~lWd~~~~~~ 695 (712)
.++++++.|+.|.+||+.+++.+..+. |...+.+++|+| ++.++++++. ||.|++||+.+++.
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 467788999999999999999888876 778899999998 8888888876 57999999999888
Q ss_pred EEEEe
Q 005147 696 LLHLV 700 (712)
Q Consensus 696 v~~~~ 700 (712)
+..+-
T Consensus 394 ~~~~~ 398 (433)
T 3bws_A 394 KEFWE 398 (433)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 76654
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4.5e-12 Score=138.77 Aligned_cols=191 Identities=12% Similarity=0.028 Sum_probs=136.6
Q ss_pred CCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCc-EEEEEc-C-CcEEE-EE
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSF-S-KLRVK-AD 558 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~v~-~d 558 (712)
+...+.+..|||||+.++....+. .......+.+|.+.+..+.| +.+|. +.+... + ...+. |+
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~---spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEE---cCCCCEEEEEEecCCCceEEEEE
Confidence 345678899999999774443321 11223456778888888999 44565 333333 2 23344 89
Q ss_pred ccCCce---ecCCCCeeEEEEcCCCCEEEEEeC-CC--cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE
Q 005147 559 LNQGDL---LNSSNLVCSLSFDRDGELFAAAGV-NK--KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632 (712)
Q Consensus 559 l~~~~~---~~h~~~V~~i~f~~~~~~lat~~~-d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 632 (712)
+.++.+ ..|...+.+++|+|||+.|++++. ++ .|.+||+.++. ......+...+.+++|+| ++++
T Consensus 254 ~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~sp-dG~~ 324 (415)
T 2hqs_A 254 LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--------PQRITWEGSQNQDADVSS-DGKF 324 (415)
T ss_dssp TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--------CEECCCSSSEEEEEEECT-TSSE
T ss_pred CCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--------EEEEecCCCcccCeEECC-CCCE
Confidence 987754 367888999999999999888886 45 67777876521 122234556788999999 5888
Q ss_pred EEEEeCC---CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC---cEEEEeCCCCcEEEEE
Q 005147 633 IASSNFE---GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG---SVKLWSINQAILLLHL 699 (712)
Q Consensus 633 lasgs~D---g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~---~v~lWd~~~~~~v~~~ 699 (712)
|++++.+ +.|.+||+.+++. ..+..|. .+.+++|+| ++.+|++++.|+ .|.+||+.. ..+..+
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g-~~~~~l 393 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDG-RFKARL 393 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECT-TSSEEEEEEEETTEEEEEEEETTS-CCEEEC
T ss_pred EEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcC-CCCEEEEEEcCCCccEEEEEECCC-CcEEEe
Confidence 8888764 5899999999887 4566665 899999998 999999998877 799999974 444443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7.7e-14 Score=144.50 Aligned_cols=86 Identities=15% Similarity=0.053 Sum_probs=67.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+. | +.++. ++.. ...+++||+ .|++|.+ +. ..+...++.||+.||.|||++||+|
T Consensus 153 ~E~~~l~~l~--~-~~v~~-~~~~----~~~~lvmE~~~g~~L~~-l~-------~~~~~~i~~qi~~~l~~lH~~giiH 216 (282)
T 1zar_A 153 NEFRALQKLQ--G-LAVPK-VYAW----EGNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRGIVH 216 (282)
T ss_dssp HHHHHHHHTT--T-SSSCC-EEEE----ETTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcc--C-CCcCe-EEec----cceEEEEEecCCCcHHH-cc-------hhhHHHHHHHHHHHHHHHHHCCCEe
Confidence 4555677776 4 55555 3322 345777777 5889998 52 2345679999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
|||||+|||++ ++.++|+|||++
T Consensus 217 rDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 217 GDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp SCCSTTSEEEE-TTEEEECCCTTC
T ss_pred CCCCHHHEEEE-CCcEEEEECCCC
Confidence 99999999999 999999999987
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-11 Score=133.77 Aligned_cols=162 Identities=14% Similarity=0.132 Sum_probs=123.4
Q ss_pred ceeeccCCCccceecccCCCCCCc-EEEEEcCC--cEE-EEEccCCce---ecCCCCeeEEEEcCCCCEEE-EEeCCCc-
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSK--LRV-KADLNQGDL---LNSSNLVCSLSFDRDGELFA-AAGVNKK- 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~--~~v-~~dl~~~~~---~~h~~~V~~i~f~~~~~~la-t~~~d~~- 591 (712)
...+.+|...+..+.| +.+|. +.+.+.+. ..+ +|++.+++. ..|...+.+++|+|||+.|+ +++.++.
T Consensus 171 ~~~l~~~~~~v~~~~~---Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp CEEEEEESSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CEEEeCCCCcceeeEE---cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 4677889999999999 44554 45555543 244 499988764 35788999999999999877 6666654
Q ss_pred -EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC-CC--cEEEEECCCCcEEEEeccCCCcEEEEE
Q 005147 592 -IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EG--VVQVWDVSRSQVLTEMREHERRVWSID 667 (712)
Q Consensus 592 -I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~-Dg--~V~lwD~~~~~~~~~~~~H~~~v~sv~ 667 (712)
|++||+.+.. ......|...+.+++|+| ++++|++++. +| .|.+||+.+++. ..+..|...+.+++
T Consensus 248 ~i~~~d~~~~~--------~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 248 NLYVMDLASGQ--------IRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDAD 317 (415)
T ss_dssp EEEEEETTTCC--------EEECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEE
T ss_pred eEEEEECCCCC--------EEeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeE
Confidence 9999987521 233446778899999999 5888887776 45 577779988764 45667888999999
Q ss_pred EecCCCCEEEEEECC---CcEEEEeCCCCcEE
Q 005147 668 FSSADPTLLASGSDD---GSVKLWSINQAILL 696 (712)
Q Consensus 668 fsp~~~~~l~sgs~D---~~v~lWd~~~~~~v 696 (712)
|+| ++++|++++.| ..|.+||+.+++..
T Consensus 318 ~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 318 VSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp ECT-TSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred ECC-CCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 998 99999888864 58999999988763
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.6e-11 Score=122.71 Aligned_cols=192 Identities=13% Similarity=0.050 Sum_probs=132.2
Q ss_pred CCcccccccCCCCCCCCccc--------cCCCCCCceeeccC-CCccceecccCCCCCCcEEEEEc-C---CcEEE-EEc
Q 005147 494 RPLVRHSQLSSDGRTSKPLV--------NERSSINNLGSKEG-YSEGRRSGWINPFLEGLCKYLSF-S---KLRVK-ADL 559 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~l~gh-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~v~-~dl 559 (712)
...+.+..|+|||..++... .+....+.....+| ...+..+.| +.++...++.. + ...++ +++
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGI---SPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEE---CTTSSEEEEEECTTTSSCEEEEEET
T ss_pred CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEE---CCCCCEEEEEEeCCCCcceEEEEEC
Confidence 44678899999999653321 11102233334455 356677888 34444333333 2 23444 555
Q ss_pred cCCce--ecCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 560 NQGDL--LNSSNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 560 ~~~~~--~~h~~~V~~i~f~~~~~~la-t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+.. +.+...+.+++|+|+++.|+ +++.++.++||+++... ........+...+.+++|+| ++.+|+.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~s~-dg~~l~~~ 190 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS------GVETRLTHGEGRNDGPDYSP-DGRWIYFN 190 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT------CCEEECCCSSSCEEEEEECT-TSSEEEEE
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCC------CcceEcccCCCccccceECC-CCCEEEEE
Confidence 55442 23445589999999999777 78889999999975311 11233445677899999999 57777665
Q ss_pred e-CCCcEEEEECC-CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC-----------CcEEEEeCCCCcEE
Q 005147 637 N-FEGVVQVWDVS-RSQVLTEMREHERRVWSIDFSSADPTLLASGSDD-----------GSVKLWSINQAILL 696 (712)
Q Consensus 637 s-~Dg~V~lwD~~-~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D-----------~~v~lWd~~~~~~v 696 (712)
+ .++.+.||++. .+..+..+..|...+.+++|+| ++.+|++++.| +.|.+||+.+++..
T Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 5 69999999987 5667788888999999999998 99999888876 56999999987653
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.5e-10 Score=133.44 Aligned_cols=190 Identities=9% Similarity=0.015 Sum_probs=130.3
Q ss_pred cccccccCCCCCCCCccccCC--------CCCCceeeccCCC---ccceecccCCCCCCcEEEEEcCC---------cEE
Q 005147 496 LVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYS---EGRRSGWINPFLEGLCKYLSFSK---------LRV 555 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~v 555 (712)
...++.|||||+.+.. ..+. .......+.+|.. .+..+.| +.||...+...++ ..+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~---SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI---SPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE---CTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEE---CCCCCEEEEEecCccceeecceeeE
Confidence 3567899999996532 2121 1122344555654 3677788 5566644443331 344
Q ss_pred -EEEccCCce--e----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC----------
Q 005147 556 -KADLNQGDL--L----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS---------- 618 (712)
Q Consensus 556 -~~dl~~~~~--~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~---------- 618 (712)
+|++.+++. + +|...|.+++|+|||+.||+++. +.|++||+.++... .....+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~-------~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI-------RVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE-------EEECCCBTTTEEEEECCH
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE-------EEecCCCCCceECcccce
Confidence 499988764 2 23445899999999999999886 79999999763211 11111111
Q ss_pred --------CeEEEEEcCCCCCEEEEEeCCC----------------------------------cEEEEECCCCcEEEEe
Q 005147 619 --------KLSSICWNSYIKSQIASSNFEG----------------------------------VVQVWDVSRSQVLTEM 656 (712)
Q Consensus 619 --------~v~~v~~~p~~~~~lasgs~Dg----------------------------------~V~lwD~~~~~~~~~~ 656 (712)
.+.+++|+| +++.||+++.|+ .|.+||+.+++....+
T Consensus 166 v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 347899999 699999988653 7999999998876677
Q ss_pred ccC------CCcEEEEEEecCCCCEEEEEEC----CCcEEEEeCCCCcEEEEE
Q 005147 657 REH------ERRVWSIDFSSADPTLLASGSD----DGSVKLWSINQAILLLHL 699 (712)
Q Consensus 657 ~~H------~~~v~sv~fsp~~~~~l~sgs~----D~~v~lWd~~~~~~v~~~ 699 (712)
..| ...+.+++|+| ||+++++++. +..|.+||+.+++....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred eCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 654 67899999998 9998877754 467999999998865443
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.1e-10 Score=134.72 Aligned_cols=161 Identities=11% Similarity=0.080 Sum_probs=112.6
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCC---c---eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG---D---LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~---~---~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
+..+.| +.||...+.... +.++ |++.++ . +..|...+.+++|+|||++||+++ ++.|++||+.++...
T Consensus 111 v~~~~~---SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQW---SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEE---CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred cceeEE---CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 566777 556654444444 4544 999877 4 345778899999999999999987 569999999763211
Q ss_pred Cccc-ccceEEecC--------CCCeEEEEEcCCCCCEEEEEeCCC---------------------------------c
Q 005147 604 NRDI-HYPVVEMAS--------RSKLSSICWNSYIKSQIASSNFEG---------------------------------V 641 (712)
Q Consensus 604 ~~~~-~~~~~~~~~--------~~~v~~v~~~p~~~~~lasgs~Dg---------------------------------~ 641 (712)
.... .......++ ...+.+++|+| ++++|++++.|+ .
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 1000 000000000 01247899999 689999988776 7
Q ss_pred EEEEECCC-CcEEEEec--cCCCcEEEEEEecCCCCEEEEEEC-----CCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSR-SQVLTEMR--EHERRVWSIDFSSADPTLLASGSD-----DGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~-~~~~~~~~--~H~~~v~sv~fsp~~~~~l~sgs~-----D~~v~lWd~~~~~~v~~~ 699 (712)
|.+||+.+ ++...... .|...+.+++| | ||+.|+.++. +..|.+||+.+++....+
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 89999998 87655443 48889999999 9 9998887764 678999999998865443
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.8e-10 Score=114.27 Aligned_cols=166 Identities=14% Similarity=0.106 Sum_probs=118.2
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC-Ccee----cC-CCCeeEEEEcCCCCEEEEEe--CCCcEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ-GDLL----NS-SNLVCSLSFDRDGELFAAAG--VNKKIK 593 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~-~~~~----~h-~~~V~~i~f~~~~~~lat~~--~d~~I~ 593 (712)
..+.+|...+..+.| +.++...++..+....+|++.+ +... ++ ...|.+++|+|++++|++++ .++.++
T Consensus 35 ~~~~~~~~~v~~~~~---spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 35 RVVWQTPELFEAPNW---SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEEEESSCCEEEEE---CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eeeccCCcceEeeEE---CCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 456678888999999 4556555555554444599988 6643 23 47789999999999999999 445677
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE-EEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la-sgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
||+++... .......+...+.+++|+| +++.|+ +++.|+.+.||++.. +.....+..|...+.+++|+|
T Consensus 112 l~~~~~~~-------~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~- 182 (297)
T 2ojh_A 112 IYLLPSTG-------GTPRLMTKNLPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP- 182 (297)
T ss_dssp EEEEETTC-------CCCEECCSSSSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECT-
T ss_pred EEEEECCC-------CceEEeecCCCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECC-
Confidence 77664311 1122333444589999999 477666 888999999999642 334567778889999999998
Q ss_pred CCCEEEEEE-CCCcEEEEeCC-CCcEEEEE
Q 005147 672 DPTLLASGS-DDGSVKLWSIN-QAILLLHL 699 (712)
Q Consensus 672 ~~~~l~sgs-~D~~v~lWd~~-~~~~v~~~ 699 (712)
++..|+.++ .|+.++||++. .+..+..+
T Consensus 183 dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 183 DGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 888777666 59999999986 44444443
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-10 Score=139.12 Aligned_cols=186 Identities=15% Similarity=0.048 Sum_probs=139.1
Q ss_pred CcccccccC-CCCCCCCccccC------CCCCCceeeccCCC-ccceecccCCCCCCcEEEEEcCCcEE--EEEccCCc-
Q 005147 495 PLVRHSQLS-SDGRTSKPLVNE------RSSINNLGSKEGYS-EGRRSGWINPFLEGLCKYLSFSKLRV--KADLNQGD- 563 (712)
Q Consensus 495 ~~~~~~~~~-~~g~~~~~~~~~------~~~~~~~~l~gh~~-~~~~~~~~~~~~~~~~~~~~~~~~~v--~~dl~~~~- 563 (712)
..+.+..|| |||+.++..... ........+.+|.. .+....| + +|...++..+...+ +|++..+.
T Consensus 296 ~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---s-dg~~l~~~s~~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGG---D-TKVAFIHGTREGDFLGIYDYRTGKA 371 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECS---S-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeE---c-CCCeEEEEECCCceEEEEECCCCCc
Confidence 357889999 999876433211 11123345667777 7778888 3 55433333334444 36776554
Q ss_pred --eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC-
Q 005147 564 --LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG- 640 (712)
Q Consensus 564 --~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg- 640 (712)
+.+|...+.+++|+|||++|++++.++.|++||+.++. .......|...+.+++|+| ++++|++++.++
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-------~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~ 443 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-------PTVIERSREAMITDFTISD-NSRFIAYGFPLKH 443 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECSSSCCCCEEECT-TSCEEEEEEEECS
T ss_pred eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc-------eEEeccCCCCCccceEECC-CCCeEEEEecCcc
Confidence 33677889999999999999999999999999997631 1122336788899999999 689898887654
Q ss_pred ---------cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 641 ---------VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 641 ---------~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.|.+||+.+++ +..+..|...+.+++|+| ||+.|++++.++...+|+.....
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSC
T ss_pred ccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcchhccc
Confidence 89999999887 778888999999999998 99999999999999999876543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-09 Score=114.63 Aligned_cols=157 Identities=11% Similarity=0.078 Sum_probs=114.3
Q ss_pred cceecccCCCCCCc-EEEEEcCCcEEE-EEccCCceec----CCC---------CeeEEEEcCCCCEEEEEe--CCCcEE
Q 005147 531 GRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDLLN----SSN---------LVCSLSFDRDGELFAAAG--VNKKIK 593 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~~~----h~~---------~V~~i~f~~~~~~lat~~--~d~~I~ 593 (712)
..++.| ..+|. +.+.+..+..+. |++.+++... +.. .+.++.|+|+++.+++++ .++.|.
T Consensus 91 ~~~~~~---s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 91 PFGATI---NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp CCSEEE---ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred cceEEE---CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 345555 34443 555555555554 8888776542 111 278899999999777665 478999
Q ss_pred EEEcCCccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc----CCCcEEEEEE
Q 005147 594 VFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE----HERRVWSIDF 668 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~----H~~~v~sv~f 668 (712)
+||..+.. ...... +...+.+++|+| +++.+++++.++.|.+||+.+++.+..+.. +...+.+++|
T Consensus 168 ~~d~~~~~--------~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 168 VVDGGNIK--------LKTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EEETTTTE--------EEEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred EEcCCCCc--------eEEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 99997521 222333 455688999999 588999999999999999999998887764 5667899999
Q ss_pred ecCCCCEEEEEE-CCCcEEEEeCCCCcEEEEEe
Q 005147 669 SSADPTLLASGS-DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 669 sp~~~~~l~sgs-~D~~v~lWd~~~~~~v~~~~ 700 (712)
+| ++..++.++ .++.|.+||+.+++.+..+-
T Consensus 239 s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 239 DT-ARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp ET-TTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 98 777555554 56999999999998876654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6.2e-10 Score=126.05 Aligned_cols=164 Identities=11% Similarity=0.077 Sum_probs=120.2
Q ss_pred ccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEc--CCcEEEEEccCCceecCCCCeeEE
Q 005147 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF--SKLRVKADLNQGDLLNSSNLVCSL 574 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~dl~~~~~~~h~~~V~~i 574 (712)
++++.+||||+.+ +....++.+.+|+. .+++++..+. +...+.++
T Consensus 181 ~~~v~~spdg~~l---------------------------~v~~~d~~V~v~D~~~~t~~~~~~i~------~g~~p~~v 227 (543)
T 1nir_A 181 VHISRMSASGRYL---------------------------LVIGRDARIDMIDLWAKEPTKVAEIK------IGIEARSV 227 (543)
T ss_dssp EEEEEECTTSCEE---------------------------EEEETTSEEEEEETTSSSCEEEEEEE------CCSEEEEE
T ss_pred cceEEECCCCCEE---------------------------EEECCCCeEEEEECcCCCCcEEEEEe------cCCCcceE
Confidence 6677788888876 23334467777776 5666555443 34567899
Q ss_pred EEcC----CCCEEEEEe-CCCcEEEEEcCCccccCcccccceEEe---------cCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 575 SFDR----DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEM---------ASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 575 ~f~~----~~~~lat~~-~d~~I~iwD~~~~~~~~~~~~~~~~~~---------~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+|+| +|+++++++ .+++|.+||..+... ...+... .....+.++.++|+.+.++++...++
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~-----~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-----KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCE-----EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEecccccc-----ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 9999 999998888 589999999876321 1111110 12337899999997677888889999
Q ss_pred cEEEEECCCCcEEE--EeccCCCcEEEEEEecCCCCEEEE-EECCCcEEEEeCCCCcEEEEEe
Q 005147 641 VVQVWDVSRSQVLT--EMREHERRVWSIDFSSADPTLLAS-GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 641 ~V~lwD~~~~~~~~--~~~~H~~~v~sv~fsp~~~~~l~s-gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|.+||+.+++.+. ++ .+...++++.|+| ++++|++ +..|++|.+||+.+++++..+-
T Consensus 303 ~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEEEEECTTSSSCEEEEE-ECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred eEEEEEecCCCcceeEEe-ccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 99999999876543 44 4677899999998 8886654 4569999999999998887654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-09 Score=124.02 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=108.9
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc--CCccccCcccccceEEecC
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~--~~~~~~~~~~~~~~~~~~~ 616 (712)
...++.+.+|+..+++++..+.. ++. +.++.|+|||+++++++.|++|++||+ .+. ..+....+
T Consensus 155 ~~~d~~V~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~ 220 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKI 220 (543)
T ss_dssp EGGGTEEEEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEEC
T ss_pred EcCCCeEEEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEec
Confidence 34445555555555444433332 222 889999999999999999999999999 442 12334445
Q ss_pred CCCeEEEEEcCC---CCCEEEEEeC-CCcEEEEECCCCcEEEEecc----------C-CCcEEEEEEecCCCCEEEEEEC
Q 005147 617 RSKLSSICWNSY---IKSQIASSNF-EGVVQVWDVSRSQVLTEMRE----------H-ERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 617 ~~~v~~v~~~p~---~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~----------H-~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
...+..++|+|+ ++++++++++ +++|.+||..+++++.++.. | ..++.++.|+|..+.++++.+.
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 667899999992 4888888885 89999999999999988864 2 3389999999866678888889
Q ss_pred CCcEEEEeCCCCcEEE
Q 005147 682 DGSVKLWSINQAILLL 697 (712)
Q Consensus 682 D~~v~lWd~~~~~~v~ 697 (712)
|++|.+||+.+++.+.
T Consensus 301 ~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLT 316 (543)
T ss_dssp TTEEEEEECTTSSSCE
T ss_pred CCeEEEEEecCCCcce
Confidence 9999999998866543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-10 Score=130.17 Aligned_cols=147 Identities=13% Similarity=-0.005 Sum_probs=115.7
Q ss_pred ecccCCCCCCcEEEEEcCCcEEEEEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcc
Q 005147 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRD 606 (712)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~ 606 (712)
..| ++..++.+.+....+...+|++.++.+. .+.. .++.|+|||++||+++.+ ..|++||+.++.
T Consensus 115 ~~~-s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~----- 186 (582)
T 3o4h_A 115 LSG-VDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----- 186 (582)
T ss_dssp EEE-EECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-----
T ss_pred eee-CCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-----
Confidence 355 4445555555555555567999887643 2333 899999999999988877 789999987532
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEECCCCcEEEEeccCCCcEEEEE--------EecCCCCEE
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWDVSRSQVLTEMREHERRVWSID--------FSSADPTLL 676 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD~~~~~~~~~~~~H~~~v~sv~--------fsp~~~~~l 676 (712)
......+...+.+++|+| +++.|++++.+| .|.+||+.+++.. .+.+|...+.+++ |+| ||.++
T Consensus 187 ---~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~ 260 (582)
T 3o4h_A 187 ---LRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP-DGRLA 260 (582)
T ss_dssp ---CEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEE
T ss_pred ---ceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC-CCcEE
Confidence 223456777889999999 699999999999 8999999999888 8888988888888 998 88999
Q ss_pred EEEECCCcEEEEeCCCCcEE
Q 005147 677 ASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v 696 (712)
++++.|++++||++ |+.+
T Consensus 261 ~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 261 VVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEEEETTEEEEEET--TEEE
T ss_pred EEEEcCCcEEEEEE--CCee
Confidence 99999999999999 6544
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-11 Score=124.16 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=71.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCc------cHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDV------SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH- 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~------sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH- 99 (712)
++..+|..+.|+++... . .+. ....+++||+.|+ +|.+++.. .++.++..++.||+.+|.|||
T Consensus 119 ~E~~~l~~l~~~~i~~p-~-~~~----~~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 119 KEFRNLERAKEAGVSVP-Q-PYT----YMKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHHHHHHHHHTTCCCC-C-EEE----EETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCC-e-EEE----cCCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH
Confidence 45556777878765211 1 111 1345788888642 78876522 346788999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
++||+||||||+|||++. .++|+|||++....
T Consensus 189 ~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 189 EAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999999999987 89999999996553
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-09 Score=113.66 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=67.4
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
..+.+++|+| ++++++++ ++.|.+||+.+++.+..+..+ ..+++++|+| +++++++++.|+.|.+||+.+++.+.
T Consensus 241 ~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 241 VFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp SCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred CceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 4567899999 58888888 799999999999988887643 5678999998 89988888999999999999999887
Q ss_pred EEec
Q 005147 698 HLVD 701 (712)
Q Consensus 698 ~~~~ 701 (712)
.+-.
T Consensus 316 ~~~~ 319 (337)
T 1pby_B 316 QVDL 319 (337)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.8e-09 Score=110.58 Aligned_cols=191 Identities=9% Similarity=0.043 Sum_probs=117.4
Q ss_pred cccccccCCCCCCCCccccCCCCC------------CceeeccCCCccceecccCCCCCC-cEEEEEcCCcEE-EEEccC
Q 005147 496 LVRHSQLSSDGRTSKPLVNERSSI------------NNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRV-KADLNQ 561 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~~~------------~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v-~~dl~~ 561 (712)
.+.+..|+|||+.+.+.......+ ....+.++ ..+..+.| ..++ .+.+.+..++.+ +|++.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~---s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI---SPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE---CTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE---CCCCCEEEEecCCCCEEEEEEecC
Confidence 456778899988652222111100 11112222 33556777 3444 355555344554 499886
Q ss_pred -Ccee--------c-CCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEcCCccccCcccccceEEe----cCCCCeEEEEEc
Q 005147 562 -GDLL--------N-SSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWN 626 (712)
Q Consensus 562 -~~~~--------~-h~~~V~~i~f~~~~~~lat~~-~d~~I~iwD~~~~~~~~~~~~~~~~~~----~~~~~v~~v~~~ 626 (712)
+.+. . ....+.+++|+|+++++++++ .++.|.+||++.... ........... .....+.+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG-NIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS-CCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEeeccccCccccccCCccceEEC
Confidence 5432 1 345788999999999665554 889999999953110 00000111111 113457789999
Q ss_pred CCCCCEEE-EEeCCCcEEEEECC--C--CcEEEEeccCCCcEEEEEEecCCCCEEEEEE-CCCcEEEE--eCCCCc
Q 005147 627 SYIKSQIA-SSNFEGVVQVWDVS--R--SQVLTEMREHERRVWSIDFSSADPTLLASGS-DDGSVKLW--SINQAI 694 (712)
Q Consensus 627 p~~~~~la-sgs~Dg~V~lwD~~--~--~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs-~D~~v~lW--d~~~~~ 694 (712)
|. +++|+ ++..++.|.+||+. + .+.+..+..+.. +.+++|+| ++++|++++ .|+.|.+| |..+++
T Consensus 240 ~d-g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 240 PD-GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDH-SGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp TT-SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECT-TSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred CC-CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECC-CCCEEEEecCCCCeEEEEEEcCCCce
Confidence 94 66665 55689999999998 3 345656665555 88999998 888777777 68999999 555654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-09 Score=112.88 Aligned_cols=117 Identities=8% Similarity=0.156 Sum_probs=89.0
Q ss_pred CeeEEEEcCCCCEEEEEe------------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 570 LVCSLSFDRDGELFAAAG------------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~------------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+.+++|+|+++++++++ .++.|.+||+.+.. ..........+.+++|+| ++++|+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--------~~~~~~~~~~~~~~~~s~-dg~~l~~~- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--------RRKAFEAPRQITMLAWAR-DGSKLYGL- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--------EEEEEECCSSCCCEEECT-TSSCEEEE-
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--------EEEEEeCCCCcceeEECC-CCCEEEEe-
Confidence 577899999999888886 57999999996521 122233345678899999 57777777
Q ss_pred CCCcEEEEECCCCcEEEEeccCC---------------------------------------------------------
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHE--------------------------------------------------------- 660 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~--------------------------------------------------------- 660 (712)
++.|.+||+.+++.+..+..+.
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred -CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 6889999999887766554322
Q ss_pred ---------CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 661 ---------RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 661 ---------~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+.+++|+| ++.+++++ |+.|.+||+.+++.+..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred eEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceec
Confidence 2345689998 89988888 7999999999988776654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.2e-09 Score=108.90 Aligned_cols=188 Identities=10% Similarity=0.042 Sum_probs=123.3
Q ss_pred ccccCCCCCCCCcccc--------CC-CCCC-ceeeccCCCccceecccCCCCCCcEEEEEcCC-c--EEE-EEccCCce
Q 005147 499 HSQLSSDGRTSKPLVN--------ER-SSIN-NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK-L--RVK-ADLNQGDL 564 (712)
Q Consensus 499 ~~~~~~~g~~~~~~~~--------~~-~~~~-~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~-~dl~~~~~ 564 (712)
+..|+|||+.+.+... +. .... ...+..+.....++.| ..+|...+..... . .+. |++.+++.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI---TPDDQFAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE---CTTSSEEEECCCSSSSCEEEEEETTTTEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE---CCCCCEEEEecCCCCcccEEEEECCCCCe
Confidence 6778888874411111 00 1112 3445555555544777 4455544444444 2 544 99988765
Q ss_pred ec---CCCCeeEEEEcCCCC-EEEEEeCCCc-EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE-EEEEeC
Q 005147 565 LN---SSNLVCSLSFDRDGE-LFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNF 638 (712)
Q Consensus 565 ~~---h~~~V~~i~f~~~~~-~lat~~~d~~-I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~-lasgs~ 638 (712)
.. +.....+++|+|+|+ +++++..++. |.+|++...... .. .. .........+.+++|+| ++++ ++++..
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~-~~-~~-~~~~~~~~~~~~~~~sp-dg~~l~v~~~~ 196 (331)
T 3u4y_A 121 ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL-FD-TG-QEFISGGTRPFNITFTP-DGNFAFVANLI 196 (331)
T ss_dssp EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE-EE-EE-EEEECSSSSEEEEEECT-TSSEEEEEETT
T ss_pred EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE-ee-cC-CccccCCCCccceEECC-CCCEEEEEeCC
Confidence 42 456678999999998 4555566688 999998742110 00 00 12234456689999999 4764 555567
Q ss_pred CCcEEEEECCCCcE---EEEeccCCCcEEEEEEecCCCCEEEE-EECCCcEEEEeCCCCcE
Q 005147 639 EGVVQVWDVSRSQV---LTEMREHERRVWSIDFSSADPTLLAS-GSDDGSVKLWSINQAIL 695 (712)
Q Consensus 639 Dg~V~lwD~~~~~~---~~~~~~H~~~v~sv~fsp~~~~~l~s-gs~D~~v~lWd~~~~~~ 695 (712)
++.|.+||+.+++. +..+..+ ..+.+++|+| ++++++. ...++.|.+||+.+++.
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVGTN-NLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCeEEEEECCCCcccceeeeccCC-CCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCce
Confidence 89999999999987 7777744 6778999998 8886554 45688999999999876
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.6e-10 Score=131.25 Aligned_cols=155 Identities=12% Similarity=-0.017 Sum_probs=107.4
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCC---CeeEEEEcCCCCEEEEEeCC---------CcEEEE
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSN---LVCSLSFDRDGELFAAAGVN---------KKIKVF 595 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~---~V~~i~f~~~~~~lat~~~d---------~~I~iw 595 (712)
..+.| +.||.+.+.+.+....+|++.+++.. +|.. .|.+++|+|||++|++++.+ +.|.+|
T Consensus 20 ~~~~~---spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 20 PEAKW---ISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCB---SSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccEE---cCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 45566 23444333333332333777766532 2333 49999999999999999875 678899
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcE------------
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV------------ 663 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v------------ 663 (712)
|+.++... .......+...+.+++|+| +++.||+++. +.|.+||+.+++.......+...+
T Consensus 97 d~~~~~~~-----~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 97 KIPHGDPQ-----SLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp ESSSCCCE-----ECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred ECCCCceE-----eccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 99763210 0001123444588999999 6999999886 799999999988776665544433
Q ss_pred ------EEEEEecCCCCEEEEEECCC----------------------------------cEEEEeCCCCcEEE
Q 005147 664 ------WSIDFSSADPTLLASGSDDG----------------------------------SVKLWSINQAILLL 697 (712)
Q Consensus 664 ------~sv~fsp~~~~~l~sgs~D~----------------------------------~v~lWd~~~~~~v~ 697 (712)
.+++|+| ||+.|++++.|+ .|.+||+.+++...
T Consensus 170 e~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 170 EILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp TTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred EeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 7899998 999999998654 79999998887533
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-09 Score=132.87 Aligned_cols=152 Identities=9% Similarity=0.029 Sum_probs=119.5
Q ss_pred CCCccceecccCCC-CCCc-EEEEEcCCcEEE-EEccCCce---ecCCC-CeeEEEEcCCCCEEEEEeCCCcEE-EEEcC
Q 005147 527 GYSEGRRSGWINPF-LEGL-CKYLSFSKLRVK-ADLNQGDL---LNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECD 598 (712)
Q Consensus 527 h~~~~~~~~~~~~~-~~~~-~~~~~~~~~~v~-~dl~~~~~---~~h~~-~V~~i~f~~~~~~lat~~~d~~I~-iwD~~ 598 (712)
|...+..+.| + .+|. +.+.. .+.+. |++..+.. ..|.. .+.+++|+ ||+.|++++.+..|. +||+.
T Consensus 294 ~~~~v~~~~~---S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDF---SPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEE---EECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT
T ss_pred cccccceeee---cCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC
Confidence 4456777888 4 4554 33333 34444 77776653 34666 89999999 999999999888888 88986
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
+.. ......|...+.+++|+| ++.+||+++.++.|.+||+.+++....+.+|...|.+++|+| |+++|++
T Consensus 368 ~~~--------~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~ 437 (1045)
T 1k32_A 368 TGK--------AEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAY 437 (1045)
T ss_dssp TCC--------EEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEE
T ss_pred CCC--------ceEecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEE
Confidence 521 112226678899999999 699999999999999999999998888888999999999998 9999998
Q ss_pred EECCC----------cEEEEeCCCCc
Q 005147 679 GSDDG----------SVKLWSINQAI 694 (712)
Q Consensus 679 gs~D~----------~v~lWd~~~~~ 694 (712)
++.++ .|++||+.+++
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred EecCccccccCCCCCeEEEEECCCCc
Confidence 88754 89999999876
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.2e-09 Score=125.89 Aligned_cols=105 Identities=6% Similarity=-0.044 Sum_probs=81.9
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.|.+++|+|||++|++++. +.|.+||+.++.. ........+...+.+++|+| ++++||+++ ++.|.+||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc-----ceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCC
Confidence 4789999999999999886 9999999976310 01122334567899999999 699999988 46899999999
Q ss_pred CcEEEEeccCCCc----------------EEEEEEecCCCCEEEEEECCC
Q 005147 650 SQVLTEMREHERR----------------VWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 650 ~~~~~~~~~H~~~----------------v~sv~fsp~~~~~l~sgs~D~ 683 (712)
++.......+... +.+++|+| ||+.|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~ 230 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDE 230 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEEC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcC
Confidence 8877655544443 47899998 999999998776
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.7e-09 Score=121.61 Aligned_cols=182 Identities=12% Similarity=-0.036 Sum_probs=120.5
Q ss_pred ccccccCCCCCCCCcccc-CCC-------CCCceeeccCC-CccceecccCCCCCCcEEEEEcC----CcEEE--EEc--
Q 005147 497 VRHSQLSSDGRTSKPLVN-ERS-------SINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFS----KLRVK--ADL-- 559 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~-~~~-------~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~----~~~v~--~dl-- 559 (712)
+.++.|||||+.++.... +.. ......+..|. ..+....| + .| .+.++... ....+ +++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~-s--pd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHY-G--VG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECT-T--CS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccC-C--CC-eEEEEeccCCCCcceEEEEEeccC
Confidence 778999999998754433 211 11223444555 57778888 3 34 44444432 22223 333
Q ss_pred cCCc-eecCCCCeeEEEEcCCCC--EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 560 NQGD-LLNSSNLVCSLSFDRDGE--LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 560 ~~~~-~~~h~~~V~~i~f~~~~~--~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+. .+.....+...+|+|+++ .+++++.+ .+.+||+.++.. .....+.. .+++|+| ++++||++
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~--------~~l~~~~~--~~~~~sp-DG~~la~~ 167 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGL--------RELARLPG--FGFVSDI-RGDLIAGL 167 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEE--------EEEEEESS--CEEEEEE-ETTEEEEE
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcE--------EEeecCCC--ceEEECC-CCCEEEEE
Confidence 2211 222233455668888775 45555444 455999965311 11112222 7899999 69999988
Q ss_pred eCC----CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC--cEEEEeCCCCcEE
Q 005147 637 NFE----GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG--SVKLWSINQAILL 696 (712)
Q Consensus 637 s~D----g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~--~v~lWd~~~~~~v 696 (712)
+.| +.|.+||+.+++.. .+..|...+.+++|+| ||+.|++++.|+ .|.+||+.+++..
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred EEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 877 78999999988754 6788999999999998 999999888899 8999999988876
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.8e-08 Score=106.47 Aligned_cols=161 Identities=11% Similarity=0.107 Sum_probs=106.8
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEcc-CCcee------c-CCCCeeEEEEcCCCCEEEE-EeCCCcEEEEEcCCc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLN-QGDLL------N-SSNLVCSLSFDRDGELFAA-AGVNKKIKVFECDAI 600 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~-~~~~~------~-h~~~V~~i~f~~~~~~lat-~~~d~~I~iwD~~~~ 600 (712)
+..+.| ..+|.+.+.+.....+. |++. .+.+. . ....+..++|+|||+++++ +..++.|.+||+...
T Consensus 143 ~~~~~~---spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 143 IHYTDL---TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EEEEEE---CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ceEEEE---CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 334666 34555566666666655 8887 55432 1 2346788999999995555 567899999998641
Q ss_pred cccCcccccceEEecC----CCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECC---CCcEEEEeccCCCcEEEEEEecCC
Q 005147 601 INENRDIHYPVVEMAS----RSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVS---RSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~----~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~---~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
... ............ ...+..++|+| ++++| +++..++.|.+||+. +...+..+..|...+++++|+| +
T Consensus 220 ~g~-~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-d 296 (347)
T 3hfq_A 220 TGA-FTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-T 296 (347)
T ss_dssp TTE-EEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-T
T ss_pred CCc-eEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-C
Confidence 000 000000111111 14588999999 57766 666679999999997 3356677777777889999998 8
Q ss_pred CCEEEEEEC-CCcEEEE--eCCCCcEEE
Q 005147 673 PTLLASGSD-DGSVKLW--SINQAILLL 697 (712)
Q Consensus 673 ~~~l~sgs~-D~~v~lW--d~~~~~~v~ 697 (712)
+++|++++. ++.|.+| |..+++...
T Consensus 297 g~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 988777775 5999999 656666553
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.02 E-value=9.3e-09 Score=109.38 Aligned_cols=157 Identities=10% Similarity=0.092 Sum_probs=102.9
Q ss_pred ceecccCCCCCCc-EEEEEcCCcEEE-EEccCCc-------e----------ecCCCCeeEEEEcCCCCEEEEEe-CCCc
Q 005147 532 RRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGD-------L----------LNSSNLVCSLSFDRDGELFAAAG-VNKK 591 (712)
Q Consensus 532 ~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~-------~----------~~h~~~V~~i~f~~~~~~lat~~-~d~~ 591 (712)
..+.| ..+|. +.+.+.....+. |++.... + ..+.....+++|+|+|+++++++ .++.
T Consensus 158 ~~~~~---spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 158 HCVRI---TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp EEEEE---CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred eEEEE---CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 34555 34554 455555455544 7665322 1 12456678999999999877776 6899
Q ss_pred EEEEEcCCccccCcccccceE-EecCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECC--CCc--EEEEeccCCCcEE
Q 005147 592 IKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVS--RSQ--VLTEMREHERRVW 664 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~--~~~--~~~~~~~H~~~v~ 664 (712)
|.+||+.++.... ...+. ...+.....+++|+| ++++|++++. ++.|.+||+. +++ .+..+.. ...++
T Consensus 235 v~v~~~~~g~~~~---~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 235 VIAFRYADGMLDE---IQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp EEEEEEETTEEEE---EEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred EEEEEecCCceEE---eEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 9999996421100 00011 112234568999999 5887766665 4899999996 454 4555554 56788
Q ss_pred EEEEecCCCCEEEEEE-CCCcEEEE--eCCCCcEEE
Q 005147 665 SIDFSSADPTLLASGS-DDGSVKLW--SINQAILLL 697 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs-~D~~v~lW--d~~~~~~v~ 697 (712)
+++|+| ++++|++++ .++.|.+| |..+++...
T Consensus 310 ~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 310 NFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred eEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 999998 899888777 68999996 555666543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-08 Score=107.26 Aligned_cols=157 Identities=11% Similarity=0.051 Sum_probs=104.6
Q ss_pred cCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEcc--CCcee-----cCCCCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q 005147 526 EGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLN--QGDLL-----NSSNLVCSLSFDRDGELFAAAGV-NKKIKVF 595 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~--~~~~~-----~h~~~V~~i~f~~~~~~lat~~~-d~~I~iw 595 (712)
.|...+..+.| ..++. +.+.+.+++.+. |++. ++++. .....+.+++|+|+++++++++. ++.|.+|
T Consensus 35 ~~~~~~~~~~~---spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVV---SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEE---CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEE---CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 44455566666 33443 444444434544 7776 44422 12347899999999997776664 8899999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCC-CcEEE----Eecc-CCCcEEEEEE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSR-SQVLT----EMRE-HERRVWSIDF 668 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~-~~~~~----~~~~-H~~~v~sv~f 668 (712)
|+..+ ..............+.+++|+| +++++++++ .++.|.+||+.+ ++... .+.. ....+.+++|
T Consensus 112 d~~~~-----~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 112 RLEDG-----LPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EEETT-----EEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred ECCCC-----ccccccccccCCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 99421 0112233344456689999999 577777777 899999999987 65432 2333 3457889999
Q ss_pred ecCCCCEEE-EEECCCcEEEEeCCC
Q 005147 669 SSADPTLLA-SGSDDGSVKLWSINQ 692 (712)
Q Consensus 669 sp~~~~~l~-sgs~D~~v~lWd~~~ 692 (712)
+| ++.+++ +++.++.|.+||+..
T Consensus 186 ~p-dg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 186 HP-NEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CT-TSSEEEEEETTTTEEEEEESSC
T ss_pred CC-CCCEEEEEeCCCCEEEEEEecC
Confidence 98 888654 555899999999953
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=9.1e-09 Score=108.35 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=101.7
Q ss_pred CcEEE-EEccCCceec----CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 552 KLRVK-ADLNQGDLLN----SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 552 ~~~v~-~dl~~~~~~~----h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
+..+. |++.+++... +...+.+++|+|+++.+++++.++.|.+||..+...... ......++...+.+++|+
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR---KKLLDDGKEHFFINISLD 239 (353)
T ss_dssp SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE---EECCCSSSCCCEEEEEEE
T ss_pred CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE---EEcCCCCCCcccceEEEC
Confidence 34333 7776665432 455688999999999999999999999999976321000 000011245568899999
Q ss_pred CCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 627 SYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 627 p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|. ++.++.++ .++.|.+||+.+++.+..+..+.. .+++|+| +++ +++++..|+.|.+||+.+++.+..+.
T Consensus 240 ~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 240 TA-RQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp TT-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 94 66555555 559999999999999888875443 5799998 777 55555579999999999998876654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=3.4e-09 Score=123.60 Aligned_cols=142 Identities=13% Similarity=0.157 Sum_probs=101.4
Q ss_pred EEEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC-----ccccCccc--ccceE-----EecCCCCe
Q 005147 556 KADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINENRDI--HYPVV-----EMASRSKL 620 (712)
Q Consensus 556 ~~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~-----~~~~~~~~--~~~~~-----~~~~~~~v 620 (712)
+|++.++.+ ..+...+.+++|+|||+.||++ .|+.|++||+.+ +....... ...+. ...+...+
T Consensus 105 ~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~ 183 (706)
T 2z3z_A 105 GFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIE 183 (706)
T ss_dssp EEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCC
T ss_pred EEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCC
Confidence 377766553 3466778999999999999995 689999999975 32111000 00000 00011225
Q ss_pred EEEEEcCCCCCEEEEEe---------------------------------CCCcEEEEECCCCcEEEEec--cCCCcEEE
Q 005147 621 SSICWNSYIKSQIASSN---------------------------------FEGVVQVWDVSRSQVLTEMR--EHERRVWS 665 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs---------------------------------~Dg~V~lwD~~~~~~~~~~~--~H~~~v~s 665 (712)
.+++|+| ++++|++++ .+..|.+||+.+++...... .|...+.+
T Consensus 184 ~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 184 KGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred ceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 8999999 699999987 34679999999988655443 57788999
Q ss_pred EEEecCCCCEEEEEECCC-----cEEEEeCCCCcEEEEEe
Q 005147 666 IDFSSADPTLLASGSDDG-----SVKLWSINQAILLLHLV 700 (712)
Q Consensus 666 v~fsp~~~~~l~sgs~D~-----~v~lWd~~~~~~v~~~~ 700 (712)
++|+| |++.|++++.|+ .|.+||+.+++.+..+.
T Consensus 263 ~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 263 LSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 99998 999999988776 99999999985554444
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.8e-08 Score=105.32 Aligned_cols=160 Identities=10% Similarity=0.050 Sum_probs=108.5
Q ss_pred CCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce-e----cCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEE
Q 005147 527 GYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL-L----NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFE 596 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~-~----~h~~~V~~i~f~~~~~~lat~~~d~---~I~iwD 596 (712)
+.... .+.| ..++. +.+.+.....+. |++.++++ . .+..++.+++|+|++++++++..++ .|.+||
T Consensus 39 ~~~~~-~~~~---s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 39 GYDFV-DTAI---TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CCCEE-EEEE---CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEE
T ss_pred cCCcc-eEEE---cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEE
Confidence 33344 6666 44554 555555455655 99988775 3 2445555599999999988555553 899999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCC-EEEEEeCCCc-EEEEECCCCcEE----EEeccCCCcEEEEEEec
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGV-VQVWDVSRSQVL----TEMREHERRVWSIDFSS 670 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~-~lasgs~Dg~-V~lwD~~~~~~~----~~~~~H~~~v~sv~fsp 670 (712)
+.+.. .+..........+++|+|+ ++ +++++..++. |.+||+.....+ .....+...+.+++|+|
T Consensus 115 ~~~~~--------~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 115 FLKNK--------FISTIPIPYDAVGIAISPN-GNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp TTTTE--------EEEEEECCTTEEEEEECTT-SSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred CCCCC--------eEEEEECCCCccceEECCC-CCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 97521 2233444566799999995 65 5555566688 999999864332 12223456689999998
Q ss_pred CCCC-EEEEEECCCcEEEEeCCCCcE---EEEEe
Q 005147 671 ADPT-LLASGSDDGSVKLWSINQAIL---LLHLV 700 (712)
Q Consensus 671 ~~~~-~l~sgs~D~~v~lWd~~~~~~---v~~~~ 700 (712)
+++ +++++..++.|.+||+.+++. +..+.
T Consensus 186 -dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 186 -DGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp -TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred -CCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 887 456666799999999999887 55543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.7e-10 Score=129.95 Aligned_cols=160 Identities=9% Similarity=0.033 Sum_probs=108.2
Q ss_pred cceecccCCCCCCcEEEEEcC---------CcEEE-EEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 531 GRRSGWINPFLEGLCKYLSFS---------KLRVK-ADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~---------~~~v~-~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
+....| +.||...+...+ +..+. |++.+++. ..-...+.+++|+|||+.||.+. ++.|++||+
T Consensus 62 ~~~~~~---SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGL---SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEE---CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEE---CCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 667778 456654333322 24444 99998887 44456789999999999999986 789999999
Q ss_pred CCccccCc--ccccceEEecCCC---------CeEEEEEcCCCCCEEEEEeCCC--------------------------
Q 005147 598 DAIINENR--DIHYPVVEMASRS---------KLSSICWNSYIKSQIASSNFEG-------------------------- 640 (712)
Q Consensus 598 ~~~~~~~~--~~~~~~~~~~~~~---------~v~~v~~~p~~~~~lasgs~Dg-------------------------- 640 (712)
.++..... .........++.. ...+++|+| +++.||+++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 76422110 0000111112211 125899999 699999988663
Q ss_pred --------cEEEEECCCCcEE--------EEeccCCCcEEEEEEecCCCCEEEEEECC----CcEEEEe----CCCCcEE
Q 005147 641 --------VVQVWDVSRSQVL--------TEMREHERRVWSIDFSSADPTLLASGSDD----GSVKLWS----INQAILL 696 (712)
Q Consensus 641 --------~V~lwD~~~~~~~--------~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----~~v~lWd----~~~~~~v 696 (712)
.|.+||+.+++.. ..+.+|...+.+++|+| |+.+++++... ..|.+|| +.++++.
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999988653 22446889999999998 78888775533 2488899 7776543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-08 Score=119.08 Aligned_cols=135 Identities=15% Similarity=0.192 Sum_probs=98.8
Q ss_pred EEE-EEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEEcCCccccCcccccceEEecCCC---
Q 005147 554 RVK-ADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRS--- 618 (712)
Q Consensus 554 ~v~-~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~-----~I~iwD~~~~~~~~~~~~~~~~~~~~~~--- 618 (712)
.+. |++.+++.. .|...|.+++|+|||+.|++++.++ .|++||+.++.. ...+....+..
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~-----~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF-----VRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE-----EEEEEEEECSSCCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce-----eeEEEEccCCCeEC
Confidence 344 898877642 3567799999999999999988776 999999976311 11111112222
Q ss_pred CeEEEEEcC-CCCCEEEEEeCCCcEEEEECC-CCcEEEEeccCCCcEEE-EEEecCCCCEEEEE-ECCC----cEEEEeC
Q 005147 619 KLSSICWNS-YIKSQIASSNFEGVVQVWDVS-RSQVLTEMREHERRVWS-IDFSSADPTLLASG-SDDG----SVKLWSI 690 (712)
Q Consensus 619 ~v~~v~~~p-~~~~~lasgs~Dg~V~lwD~~-~~~~~~~~~~H~~~v~s-v~fsp~~~~~l~sg-s~D~----~v~lWd~ 690 (712)
.+.+++|+| .++.++++++.||.++||++. ++..+..+..|...+.+ ++|+| ++..|+.+ +.|+ .|..||+
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEET
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEc
Confidence 246789998 137799999999999999987 67888899989888987 79998 77766554 4554 6777787
Q ss_pred CCCc
Q 005147 691 NQAI 694 (712)
Q Consensus 691 ~~~~ 694 (712)
.++.
T Consensus 390 ~~~~ 393 (706)
T 2z3z_A 390 KGGK 393 (706)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 7665
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-08 Score=103.69 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=98.7
Q ss_pred CCCcEEEEEcCCcEEE-EEccCCcee-------cC-----------CCCeeEEEEcCCCCEEEEEe-CCCcEEEEEcCCc
Q 005147 541 LEGLCKYLSFSKLRVK-ADLNQGDLL-------NS-----------SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAI 600 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~-~dl~~~~~~-------~h-----------~~~V~~i~f~~~~~~lat~~-~d~~I~iwD~~~~ 600 (712)
....+.++++.++.+. |++.....+ .+ ...+.+++|+|+|+++++++ .++.|.+|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 3445666666666655 888642211 11 23457899999999665554 5899999998752
Q ss_pred cc----c-Cccc-ccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcE--EEEe---ccCCCcEEEEEE
Q 005147 601 IN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQV--LTEM---REHERRVWSIDF 668 (712)
Q Consensus 601 ~~----~-~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~--~~~~---~~H~~~v~sv~f 668 (712)
.. . .... ............+.+++|+| ++++++.++ .++.|.+||+.++.. +..+ ..+...+.+++|
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 11 0 0000 00223344566788999999 588777666 689999999997754 3333 334456789999
Q ss_pred ecCCCCEEEEEE-C-CCcEEEEeCC
Q 005147 669 SSADPTLLASGS-D-DGSVKLWSIN 691 (712)
Q Consensus 669 sp~~~~~l~sgs-~-D~~v~lWd~~ 691 (712)
+| |+++|+.+. . ++.|.+|++.
T Consensus 267 sp-dg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 267 SP-DGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CT-TSSEEEEEECSSSCEEEEEEEC
T ss_pred CC-CCCEEEEECCCCCCEEEEEEEc
Confidence 98 898775555 4 5899999995
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-09 Score=124.72 Aligned_cols=102 Identities=9% Similarity=0.169 Sum_probs=77.6
Q ss_pred CeeEEEEcCCCCEEEEEeC---------CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 570 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~---------d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
.|.+++|+|||++||+++. ++.|++||+.++..... ..+ ...+.+++|+| +++.||++. |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~---~~l-----~~~~~~~~~SP-DG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG---NEL-----PRPIQYLCWSP-VGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS---SCC-----CSSBCCEEECS-STTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc---eec-----CcccccceECC-CCCEEEEEE-CC
Confidence 4889999999999999876 78999999976422000 001 24688999999 699999886 78
Q ss_pred cEEEEECCCCcEEEEe-ccCCCcE-----------------EEEEEecCCCCEEEEEECC
Q 005147 641 VVQVWDVSRSQVLTEM-REHERRV-----------------WSIDFSSADPTLLASGSDD 682 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~-~~H~~~v-----------------~sv~fsp~~~~~l~sgs~D 682 (712)
.|.+||+.++++.... .++...| .+++|+| ||+.||+++.|
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d 189 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFN 189 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEEC
Confidence 9999999988765432 3343333 4899998 99999999876
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-08 Score=103.86 Aligned_cols=157 Identities=10% Similarity=-0.011 Sum_probs=103.6
Q ss_pred cCCCccceecccCCCCCCcEEEEEcC--CcEEE-EEccCCce------ecCCCCeeEEEEcCCCCEEEEEe-CCCcEEEE
Q 005147 526 EGYSEGRRSGWINPFLEGLCKYLSFS--KLRVK-ADLNQGDL------LNSSNLVCSLSFDRDGELFAAAG-VNKKIKVF 595 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~-~dl~~~~~------~~h~~~V~~i~f~~~~~~lat~~-~d~~I~iw 595 (712)
++......+.| ..+|.+.+.+.. ++.+. |++..+.+ ..+...+.+++|+|++++|++++ .++.|.+|
T Consensus 37 ~~~~~p~~~a~---spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLAL---SAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEE---CTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCCcceEEE---ccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 33344445556 346654444432 34444 88876552 23577889999999999888888 78999999
Q ss_pred EcCCccccCcccccceEEec----------CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC-CCcEE--EEeccC-CC
Q 005147 596 ECDAIINENRDIHYPVVEMA----------SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-RSQVL--TEMREH-ER 661 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~----------~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~-~~~~~--~~~~~H-~~ 661 (712)
|+..... ...+.... ....+.+++|+|+ +++++++..++.|.+||+. +++.. ..+..+ ..
T Consensus 114 ~~~~~g~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 114 KIAADGA-----LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EECTTSC-----EEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EeCCCCC-----eeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 9963110 11111111 2235889999994 6677777778999999998 55432 233333 33
Q ss_pred cEEEEEEecCCCCEE-EEEECCCcEEEEeCCC
Q 005147 662 RVWSIDFSSADPTLL-ASGSDDGSVKLWSINQ 692 (712)
Q Consensus 662 ~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~ 692 (712)
.+..++|+| |++++ +++..++.|.+|++..
T Consensus 188 ~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 188 GPRHLVFSP-DGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEECC-CCCEEEEEeCCCCEEEEEEecC
Confidence 678899998 88854 5556789999999874
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.5e-08 Score=101.99 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=86.9
Q ss_pred eeEEEEcCCCCEEEEEeCC------------CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 571 VCSLSFDRDGELFAAAGVN------------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 571 V~~i~f~~~~~~lat~~~d------------~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
+.+++|+|+|+++++++.+ +.|.+||+.+... ...+....+...+.+++|+| +++ ++.++.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~s~-dg~-l~~~~~ 166 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-----AKPVRTFPMPRQVYLMRAAD-DGS-LYVAGP 166 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-----BCCSEEEECCSSCCCEEECT-TSC-EEEESS
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc-----cceeeeccCCCcccceeECC-CCc-EEEccC
Confidence 7889999999999998865 8999999976321 11222333445688999999 467 555544
Q ss_pred CCcEEEEECCCCcEEEEeccCC----------------------------------------------------------
Q 005147 639 EGVVQVWDVSRSQVLTEMREHE---------------------------------------------------------- 660 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~---------------------------------------------------------- 660 (712)
.|.+||+.+++.+..+..+.
T Consensus 167 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp --SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred --cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 49999999998877765432
Q ss_pred ----------CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 661 ----------RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 661 ----------~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+.+++|+|.++.+++++ ++.|.+||+.+++.+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 1345667775478888877 8899999999988776654
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.85 E-value=9.9e-09 Score=120.69 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=75.1
Q ss_pred eeEEEEcCCCCEEEEEeCC---------CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 571 VCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 571 V~~i~f~~~~~~lat~~~d---------~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
..+++|||||++|+.++.+ +.+.+||+.++... ....+...+..++||| +++.||.+. |+.
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------~l~~~~~~~~~~~~SP-dG~~la~~~-~~~ 133 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSP-VGHKLAYVW-NND 133 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------CSSCCCTTEEEEEECS-STTCEEEEE-TTE
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------EcccCCCcceeeEECC-CCCEEEEEE-CCe
Confidence 3568999999999998876 55679999874221 1234566799999999 689998884 789
Q ss_pred EEEEECCCCcEEE-EeccCCCcE-----------------EEEEEecCCCCEEEEEECCC
Q 005147 642 VQVWDVSRSQVLT-EMREHERRV-----------------WSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 642 V~lwD~~~~~~~~-~~~~H~~~v-----------------~sv~fsp~~~~~l~sgs~D~ 683 (712)
|.+||+.+++..+ +..++...+ .++.||| ||+.||.++.|.
T Consensus 134 i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~ 192 (740)
T 4a5s_A 134 IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFND 192 (740)
T ss_dssp EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEEC
T ss_pred EEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcc
Confidence 9999999887544 223343333 3489998 999999987543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.2e-08 Score=105.26 Aligned_cols=140 Identities=13% Similarity=0.057 Sum_probs=103.0
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCc--------------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGD--------------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~--------------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
..+++ ....|++..++.+.. ++|+++... ...+.+ |..++| |+.+|+++ .++.|++||+
T Consensus 41 nlLai--s~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 41 QNLDI--SNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp BCEEE--ETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cEEEE--cCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 44444 334555555555444 447765322 234566 999999 89999998 8899999999
Q ss_pred CCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 598 DAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
++..+ ......+...+.++.+.+. .+|+++.||.|.+||+.+++... +...|.|++||| +| ++
T Consensus 114 ~sl~~-------~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSp-kG--~~ 176 (388)
T 1xip_A 114 EELSE-------FRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTN-SQ--LA 176 (388)
T ss_dssp SSTTC-------EEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECS-SE--EE
T ss_pred hhhhc-------cCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcC-Cc--eE
Confidence 76331 2233456677888888763 39999999999999999887653 457899999998 77 78
Q ss_pred EEECCCcEEEEeCCCCcE
Q 005147 678 SGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~ 695 (712)
.|..||++++|+...+..
T Consensus 177 vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEETTSCEEEEEEETTEE
T ss_pred EEEcCCcEEEEcCCCccc
Confidence 899999999999887664
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.82 E-value=4.8e-08 Score=102.43 Aligned_cols=119 Identities=10% Similarity=0.061 Sum_probs=84.9
Q ss_pred CeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecC-----CCCeEEEEEcCCCCCEEEEEeCC----
Q 005147 570 LVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-----RSKLSSICWNSYIKSQIASSNFE---- 639 (712)
Q Consensus 570 ~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~p~~~~~lasgs~D---- 639 (712)
.+.+++|+|+++++ ++++.++.|.+||+.+.... ......+ ...+.+++|+| ++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~------~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT------FHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRL 116 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE------EEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE------EEEEcccccccccccccceEECC-CCCEEEEEccccccc
Confidence 57899999999855 55567899999999763110 0111111 12377899999 58888888865
Q ss_pred --------CcEEEEECCCCc---EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 640 --------GVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 --------g~V~lwD~~~~~---~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|.+||+.+++ .+..+. +...+.+++|+| ++. ++.++. .|.+||+.+++.+..+.
T Consensus 117 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp SSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred ccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc-EEEccC--cEEEEeCCCCceecccc
Confidence 999999999853 344444 344688999998 888 444543 49999999998876654
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.7e-07 Score=98.46 Aligned_cols=160 Identities=8% Similarity=0.031 Sum_probs=104.6
Q ss_pred CCccceecccCCCCCCc-EEEEEcCCcEEE-EEcc-CCcee--------cCCCCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q 005147 528 YSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLN-QGDLL--------NSSNLVCSLSFDRDGELFAAAGV-NKKIKVF 595 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~-~~~~~--------~h~~~V~~i~f~~~~~~lat~~~-d~~I~iw 595 (712)
.....++.| ..+|. +.+.+.....+. |++. ++++. .|...+..++|+|+|+++++++. ++.|.+|
T Consensus 144 ~~~~~~~~~---spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 144 NTGIHGMVF---DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TCCEEEEEE---CTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCcceEEEE---CCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 344556666 45554 444454444554 8887 66542 13567899999999998887774 7899999
Q ss_pred EcCC--ccccCcccccceEEe-----cCCC------CeEEEE-EcCCCCCEEEEEeCCC------cEEEEECC-CCcEEE
Q 005147 596 ECDA--IINENRDIHYPVVEM-----ASRS------KLSSIC-WNSYIKSQIASSNFEG------VVQVWDVS-RSQVLT 654 (712)
Q Consensus 596 D~~~--~~~~~~~~~~~~~~~-----~~~~------~v~~v~-~~p~~~~~lasgs~Dg------~V~lwD~~-~~~~~~ 654 (712)
+++. +.... ....+... ++.. .+.+++ |+| ++++|++++.+. +|.+||+. +++...
T Consensus 221 ~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 221 VIDPATHMPVY--THHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EECTTTCCEEE--EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEeCCCCcEEE--ccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 8753 11000 00001111 1122 488999 999 588877766432 89999996 666543
Q ss_pred ---EeccCCCcEEEEEEecC--CCCEEEEEEC-CCcEEEEeCCCC
Q 005147 655 ---EMREHERRVWSIDFSSA--DPTLLASGSD-DGSVKLWSINQA 693 (712)
Q Consensus 655 ---~~~~H~~~v~sv~fsp~--~~~~l~sgs~-D~~v~lWd~~~~ 693 (712)
....+...+..++|+|. ++++|++++. +++|.+|++...
T Consensus 298 ~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 298 QLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 23345566778999986 6899988876 599999999765
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=5.4e-07 Score=92.15 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=105.0
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
..++.+ ..+|.+.++......+. |+.. +... ++...+.+|+++++++++++...++.|++||....
T Consensus 123 ~~~i~~---~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--- 195 (286)
T 1q7f_A 123 PRGVTV---DNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ--- 195 (286)
T ss_dssp EEEEEE---CTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---
T ss_pred ceEEEE---eCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---
Confidence 344444 23555556655555544 6643 3322 23456899999999998888888999999997431
Q ss_pred CcccccceEEec---CCCCeEEEEEcCCCCCEEEEEeCCC-cEEEEECCCCcEEEEeccCCC--cEEEEEEecCCCCEEE
Q 005147 604 NRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEG-VVQVWDVSRSQVLTEMREHER--RVWSIDFSSADPTLLA 677 (712)
Q Consensus 604 ~~~~~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~Dg-~V~lwD~~~~~~~~~~~~H~~--~v~sv~fsp~~~~~l~ 677 (712)
.+.... +...+..|+++| +++++++...++ .|.+||. +++.+.++..+.. .+++++|+| ++++++
T Consensus 196 ------~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~v 266 (286)
T 1q7f_A 196 ------YLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD-DGSVVL 266 (286)
T ss_dssp ------EEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET-TTEEEE
T ss_pred ------EEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC-CCcEEE
Confidence 112222 235688999999 588888888886 9999995 5777777766543 488999998 888888
Q ss_pred EEECCCcEEEEeCCCCcE
Q 005147 678 SGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~ 695 (712)
+ +.|++|++|++....+
T Consensus 267 s-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 267 A-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp E-ETTTEEEEEECSCCCC
T ss_pred E-CCCCeEEEEEcccccc
Confidence 7 5799999999876443
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-07 Score=109.56 Aligned_cols=125 Identities=6% Similarity=-0.027 Sum_probs=91.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC----------CcEEEEEcCCccccCcccccceEEe-cCCCCeEEEEEcCCCCCEEEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d----------~~I~iwD~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~las 635 (712)
|...+.+++|+|||+.|++++.+ ..|++||+.+..... ........ .+...+..++|+| ++++|+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~Sp-DG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD--RSAVRELSDDAHRFVTGPRLSP-DGRQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC--GGGSEESSCSCSSEECCCEECT-TSSEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc--CCceeEEEecCCCcccCceECC-CCCEEEE
Confidence 56678899999999999998877 589999986510000 00112222 3446678899999 6999988
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEEeccCCCcEEEEEEecCCCCEEEEEECCC--cEEEEeCCCCcE
Q 005147 636 SNFEG--------VVQVWDVS-RS---QVLTEMREHERRVWSIDFSSADPTLLASGSDDG--SVKLWSINQAIL 695 (712)
Q Consensus 636 gs~Dg--------~V~lwD~~-~~---~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~--~v~lWd~~~~~~ 695 (712)
++.++ .|.+||+. ++ +......+|...+.++.|+| ||+++++++.|+ .|.+||+.+++.
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCce
Confidence 87653 79999999 57 44444555688999999998 888888888888 566667656654
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.70 E-value=7.9e-09 Score=110.31 Aligned_cols=66 Identities=8% Similarity=0.164 Sum_probs=54.2
Q ss_pred EEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCc----------EEEEec
Q 005147 58 VHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH----------VSFIES 126 (712)
Q Consensus 58 ~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~----------vkl~df 126 (712)
+++||+ .|.+|.+++ ...++..++.||+.+|.+||.+|||||||||.|||++.++. +.||||
T Consensus 187 ~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~ 259 (397)
T 4gyi_A 187 TIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXF 259 (397)
T ss_dssp EEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCC
T ss_pred eEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEe
Confidence 567777 688887643 22356788999999999999999999999999999987763 889999
Q ss_pred cccc
Q 005147 127 ASCS 130 (712)
Q Consensus 127 g~~~ 130 (712)
+-+-
T Consensus 260 ~Q~V 263 (397)
T 4gyi_A 260 PQMV 263 (397)
T ss_dssp TTCE
T ss_pred CCcc
Confidence 8763
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-06 Score=91.93 Aligned_cols=149 Identities=11% Similarity=0.131 Sum_probs=109.7
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE-----
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE----- 613 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~----- 613 (712)
+..++.+.+++..++++...... ++-....+|+|+|+|+++++...+++|++||..... ..+..
T Consensus 65 ~~~~~~i~~~d~~~g~~~~~~~~----~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-------~~~~~~~~~~ 133 (329)
T 3fvz_A 65 PIEEDTILVIDPNNAEILQSSGK----NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-------GPLLILGRSM 133 (329)
T ss_dssp SCCSCCEEEECTTTCCEEEEECT----TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-------CCSEEESBTT
T ss_pred cccCCcEEEEECCCCeEEeccCC----CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-------EEEEEecccC
Confidence 34556667776666665432221 244678899999999999998899999999985411 01111
Q ss_pred -----ecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccC----------CCcEEEEEEecCCCCEEE
Q 005147 614 -----MASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREH----------ERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 614 -----~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H----------~~~v~sv~fsp~~~~~l~ 677 (712)
..+-.....|+++|.++.++++.+ .++.|.+|| .++..+..+... -...++|+|+|..+.+++
T Consensus 134 ~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 134 QPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp BCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 123446889999996688888886 599999999 678888877533 234899999983388999
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.+.+++|++||..+++.+.++
T Consensus 213 ~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 213 ADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEE
Confidence 9999999999999988887765
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-07 Score=109.40 Aligned_cols=158 Identities=11% Similarity=0.018 Sum_probs=106.6
Q ss_pred CCCccceecccCCCCCCc-EEEEEcC-------C--cEEE-EEccC------Cc---ee-cCCCCeeEEEEcCCCCEEEE
Q 005147 527 GYSEGRRSGWINPFLEGL-CKYLSFS-------K--LRVK-ADLNQ------GD---LL-NSSNLVCSLSFDRDGELFAA 585 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~-~~~~~~~-------~--~~v~-~dl~~------~~---~~-~h~~~V~~i~f~~~~~~lat 585 (712)
|...+....| +.||. +.+.+.+ . ..+. |++.+ +. +. .+...+.+++|+|||+.|+.
T Consensus 128 ~~~~~~~~~~---spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVL---LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp TCEEEEEEEE---ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEE
T ss_pred CCccccCcEE---CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEE
Confidence 5556667778 44554 4444433 1 2344 88877 54 33 45567888999999999998
Q ss_pred EeCCC--------cEEEEEcC-CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEECCCCcEEE
Q 005147 586 AGVNK--------KIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWDVSRSQVLT 654 (712)
Q Consensus 586 ~~~d~--------~I~iwD~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD~~~~~~~~ 654 (712)
++.++ .|.+||+. ++. ..........+...+..++|+| ++.++++++.+| .|.+||+.+++...
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~----~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGR----FADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSC----EEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEE
T ss_pred EECCCCCCCCCCcEEEEEEECCCCc----ccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceee
Confidence 88653 79999986 320 0011122234467899999999 477888998898 56666776776554
Q ss_pred EeccCCCc--------EEEEEEecCCCCEEEEEECCCcEEEE--eCCCCc
Q 005147 655 EMREHERR--------VWSIDFSSADPTLLASGSDDGSVKLW--SINQAI 694 (712)
Q Consensus 655 ~~~~H~~~--------v~sv~fsp~~~~~l~sgs~D~~v~lW--d~~~~~ 694 (712)
...+|... +.+++|+| ++.++++++. +.++|| |+.++.
T Consensus 280 l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 280 LCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred cccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc
Confidence 44433332 56789997 8999999999 999999 665554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.60 E-value=2.6e-07 Score=108.61 Aligned_cols=195 Identities=11% Similarity=0.042 Sum_probs=120.7
Q ss_pred cccccccCCCCCCCCcc-------ccCCCCCCceeeccCCCccceecc--cCCCCCCcEEEEEcCC---------cEE-E
Q 005147 496 LVRHSQLSSDGRTSKPL-------VNERSSINNLGSKEGYSEGRRSGW--INPFLEGLCKYLSFSK---------LRV-K 556 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~l~gh~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~v-~ 556 (712)
...++.|++||..+... ... .......+.+|........+ +.-+.||...+...+. +.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEETTEEEEEETT-TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEcCCcEEEEECC-CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 34578899998755221 111 11223456666654333211 1115566544444332 222 5
Q ss_pred EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc--ccccceEEecCC---------CCeEE
Q 005147 557 ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR--DIHYPVVEMASR---------SKLSS 622 (712)
Q Consensus 557 ~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~--~~~~~~~~~~~~---------~~v~~ 622 (712)
|++.++++. .|.+.+...+|||||+.||.+. ++.|++||+.++..... .........++. .....
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 999988754 5678899999999999999874 78999999876321110 011111111111 22245
Q ss_pred EEEcCCCCCEEEEEeCCC------------------------------------cEEEEECCC---Cc--EEEEec----
Q 005147 623 ICWNSYIKSQIASSNFEG------------------------------------VVQVWDVSR---SQ--VLTEMR---- 657 (712)
Q Consensus 623 v~~~p~~~~~lasgs~Dg------------------------------------~V~lwD~~~---~~--~~~~~~---- 657 (712)
+.|+| +++.||.++.|. +|.+||+.+ ++ ....+.
T Consensus 176 ~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 176 LWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp EEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred eEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 89999 699998876432 478899988 73 233343
Q ss_pred --cCCCcEEEEEEecCCCCEEEEEEC----CCcEEEEeCCCCc
Q 005147 658 --EHERRVWSIDFSSADPTLLASGSD----DGSVKLWSINQAI 694 (712)
Q Consensus 658 --~H~~~v~sv~fsp~~~~~l~sgs~----D~~v~lWd~~~~~ 694 (712)
+|...+.+++|+| |+++++.... +..|.+||+.+++
T Consensus 255 ~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 255 MLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3888999999998 8886666533 4479999999887
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-06 Score=92.22 Aligned_cols=184 Identities=9% Similarity=-0.047 Sum_probs=112.9
Q ss_pred ccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCcee-
Q 005147 499 HSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDLL- 565 (712)
Q Consensus 499 ~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~~- 565 (712)
...|||||+.++....... ..+.....+|...+.+..| +.||...++...+..+ +|++.+++..
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL---SPDDDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE---CTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE---cCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 3679999997744333111 1111122344444445667 4566444444444444 4999887643
Q ss_pred ---cCCCCeeEEE--EcCCCCEEEEE----------------------eCCCcEEEEEcCCccccCcccccceEEecCCC
Q 005147 566 ---NSSNLVCSLS--FDRDGELFAAA----------------------GVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (712)
Q Consensus 566 ---~h~~~V~~i~--f~~~~~~lat~----------------------~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~ 618 (712)
.+...+.... +++++.+++.. +.+..|.+||+.++. ......+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~l~~~~~ 188 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--------STVILQENQ 188 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------EEEEEEESS
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------eEEeecCCc
Confidence 3455554444 48999988743 244679999987631 122334556
Q ss_pred CeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCC--CcEEEEEEecCCCCEEEEEEC-CC----cE
Q 005147 619 KLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHE--RRVWSIDFSSADPTLLASGSD-DG----SV 685 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~--~~v~sv~fsp~~~~~l~sgs~-D~----~v 685 (712)
.+..++|+|.++..|+.+..+ ..|.+||+..+.. ..+..+. ..+..+.|+| ||+.|+..+. ++ .|
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECC-CCCEEEEEecCCCCCcceE
Confidence 789999999447777776653 3677788765543 4454454 3688899998 8887765554 22 39
Q ss_pred EEEeCCCCcE
Q 005147 686 KLWSINQAIL 695 (712)
Q Consensus 686 ~lWd~~~~~~ 695 (712)
.+||+.+++.
T Consensus 267 ~~~d~~~g~~ 276 (388)
T 3pe7_A 267 YSADPETLEN 276 (388)
T ss_dssp EEECTTTCCE
T ss_pred EEEecCCCce
Confidence 9999998874
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-06 Score=94.15 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=60.2
Q ss_pred EEEcCCCCCEEEEEeC-----------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 623 ICWNSYIKSQIASSNF-----------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 623 v~~~p~~~~~lasgs~-----------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
++|+|. +..++.+.. .+.|.+||+.+++.+.++..+. +++|+|+| |+++|++++. ++|.+||..
T Consensus 259 ~a~~~d-g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRA-SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEETT-TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEECS
T ss_pred EEEecC-CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECC
Confidence 678884 555544432 3489999999999999999887 99999998 8999998887 999999999
Q ss_pred CC--cEEEEEe
Q 005147 692 QA--ILLLHLV 700 (712)
Q Consensus 692 ~~--~~v~~~~ 700 (712)
++ +.+.++.
T Consensus 334 t~~l~~~~~i~ 344 (361)
T 2oiz_A 334 QPEPKLLRTIE 344 (361)
T ss_dssp SSSCEEEEEET
T ss_pred CCcceeeEEec
Confidence 99 8887763
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=5.5e-06 Score=84.53 Aligned_cols=120 Identities=12% Similarity=0.196 Sum_probs=93.3
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe---cCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
+...+.+++++++++++++...++.|.+||.... .+... .+...+.+|+++| +++++++...++.|.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---------VLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVK 188 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---------EEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC---------EEEEeCCCCccCCcEEEEECC-CCCEEEEECCCCEEE
Confidence 3467899999999998888888899999996431 11112 3445689999999 588888888899999
Q ss_pred EEECCCCcEEEEeccC--CCcEEEEEEecCCCCEEEEEECCC-cEEEEeCCCCcEEEEE
Q 005147 644 VWDVSRSQVLTEMREH--ERRVWSIDFSSADPTLLASGSDDG-SVKLWSINQAILLLHL 699 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H--~~~v~sv~fsp~~~~~l~sgs~D~-~v~lWd~~~~~~v~~~ 699 (712)
+||. +++.+.++..+ ...+.+|+++| ++.++++.+.++ .|.+||.. ++.+..+
T Consensus 189 ~~~~-~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~-g~~~~~~ 244 (286)
T 1q7f_A 189 VFNY-EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQD-GQLISAL 244 (286)
T ss_dssp EEET-TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTT-SCEEEEE
T ss_pred EEcC-CCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCC-CCEEEEE
Confidence 9997 56677777544 46789999997 899999988886 99999964 6665544
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=9.7e-07 Score=94.12 Aligned_cols=120 Identities=8% Similarity=0.066 Sum_probs=85.2
Q ss_pred CeeEEEEcCCCCE--EEEEe-------------CCCcEEEEEcCCccccCcccccceEEe--cCCCCeEEEEEcCCCCCE
Q 005147 570 LVCSLSFDRDGEL--FAAAG-------------VNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQ 632 (712)
Q Consensus 570 ~V~~i~f~~~~~~--lat~~-------------~d~~I~iwD~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~ 632 (712)
.+.+++|+|+|++ ++++. .++++.+|++.... .....+... .+...+.+++|+| ++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~sp-dG~~ 158 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG----KLEKNVQNYEYQENTGIHGMVFDP-TETY 158 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC----CEEEEEEEEECCTTCCEEEEEECT-TSSE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC----cCcceEeeEEeCCCCcceEEEECC-CCCE
Confidence 4667899999994 55553 68999999996311 001111111 3556799999999 5888
Q ss_pred EEEEeC-CCcEEEEECC-CCcEE--EEec--cCCCcEEEEEEecCCCCEEEEEEC-CCcEEEEeCC--CCcE
Q 005147 633 IASSNF-EGVVQVWDVS-RSQVL--TEMR--EHERRVWSIDFSSADPTLLASGSD-DGSVKLWSIN--QAIL 695 (712)
Q Consensus 633 lasgs~-Dg~V~lwD~~-~~~~~--~~~~--~H~~~v~sv~fsp~~~~~l~sgs~-D~~v~lWd~~--~~~~ 695 (712)
|++++. ++.|.+||+. +++.. ..+. .|...+..++|+| +++++++++. ++.|.+|++. +++.
T Consensus 159 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 159 LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 877764 6899999998 77643 3343 2467799999998 8988887775 7899999765 5654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.9e-06 Score=86.92 Aligned_cols=186 Identities=10% Similarity=0.036 Sum_probs=118.5
Q ss_pred cccccccCCCCCCCCccccCCC-----CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----
Q 005147 496 LVRHSQLSSDGRTSKPLVNERS-----SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---- 565 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---- 565 (712)
.+.+..+++++..+.....+.. ..+...+.++.....++.| ..+|.+.+.+...+.+. |+..++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNF---DRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEE---CTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEE---CCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 3556677777665532222211 1122345556666677888 35666555555555554 888776643
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC---
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF--- 638 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~--- 638 (712)
.+...+.+++|++++++++++..+ +.|.+||..+.... ...........+.+++++| +++++++...
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-----DIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYS 157 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-----EEECSSSSCCCEEEEEECT-TSCEEEEECCCBT
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-----EEEccCccCCcccceEECC-CCCEEEEeccccc
Confidence 356789999999999988887766 68999998652211 0001112345789999999 5787777654
Q ss_pred ---CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE-EEEEECCCcEEEEeCCC
Q 005147 639 ---EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL-LASGSDDGSVKLWSINQ 692 (712)
Q Consensus 639 ---Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~-l~sgs~D~~v~lWd~~~ 692 (712)
.+.|..||..+++.. .+..+...+.+++|+| ++.. +++.+.++.|.+||+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVT-PIIQNISVANGIALST-DEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp TBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCCceEEEEeCCCCEEE-EeecCCCcccceEECC-CCCEEEEEeCCCCeEEEEEecC
Confidence 355666676655543 3333445688999998 8874 45656689999999964
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-05 Score=83.74 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=110.2
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEE-EEccCC--ce------------ecCCCCeeEEEEcC-CCCEEEEEe-CCCcE
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG--DL------------LNSSNLVCSLSFDR-DGELFAAAG-VNKKI 592 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~--~~------------~~h~~~V~~i~f~~-~~~~lat~~-~d~~I 592 (712)
...++.+ ..+|.+.+++....++. |+.... .+ .++.....+|+|+| ++.++++.+ .+++|
T Consensus 92 ~p~gia~---d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 92 LPHGLSI---DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp SEEEEEE---CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred CceEEEE---CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 3445555 34566666666666655 766432 11 12344688999999 888999887 69999
Q ss_pred EEEEcCCccccCcccccceEEe-----------cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec--cC
Q 005147 593 KVFECDAIINENRDIHYPVVEM-----------ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EH 659 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~-----------~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~--~H 659 (712)
++||.... .+... ++-.....|+++|..+.++++...++.|++||..+++.+.++. .+
T Consensus 169 ~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 169 VQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp EEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred EEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 99995421 01111 1123478999999547888888899999999999999998884 56
Q ss_pred CCcEEEEEEecCCCCEEEEEE-------CCCcEEEEeCCCCcEEEEE
Q 005147 660 ERRVWSIDFSSADPTLLASGS-------DDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs-------~D~~v~lWd~~~~~~v~~~ 699 (712)
...+++++|+| +..+++.+ .+.+|++||+.+++.+..+
T Consensus 240 ~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 240 GRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 77899999997 44444443 3458999999999888765
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=102.74 Aligned_cols=116 Identities=17% Similarity=0.246 Sum_probs=86.6
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~-----~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
|...+.+++|+|||++||.++.++ .|++||+.++... ... . ....+.+++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~------~~~-~-~~~~~~~~~wsp-Dg~~l~~~~~~~~ 193 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL------PDV-L-ERVKFSCMAWTH-DGKGMFYNAYPQQ 193 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE------EEE-E-EEECSCCEEECT-TSSEEEEEECCCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------ccc-c-cCcccceEEEEe-CCCEEEEEEECCc
Confidence 444688999999999998876543 8999999763211 111 1 112367899999 6889998888876
Q ss_pred ----------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEEC-----CCcEEEEeCCC
Q 005147 642 ----------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSD-----DGSVKLWSINQ 692 (712)
Q Consensus 642 ----------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~-----D~~v~lWd~~~ 692 (712)
|.+|++.+++ .+.....|...+.++.|+| ||++|+.++. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcc
Confidence 9999999876 3333334667789999998 9998888775 67899999986
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.6e-07 Score=95.57 Aligned_cols=187 Identities=10% Similarity=-0.052 Sum_probs=108.8
Q ss_pred ccccccCCCCCCCCccccCCC----------CCCceeeccCCCc-cceecccCCCCCCcEE-EEEcCCcEEEEEccCCce
Q 005147 497 VRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSE-GRRSGWINPFLEGLCK-YLSFSKLRVKADLNQGDL 564 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~-~~~~~~~~~~~~~~~~-~~~~~~~~v~~dl~~~~~ 564 (712)
+.+..|||||+.++....... ......+..+... .....| +.+|... +.+.+....+|++.++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI---STDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE---CTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE---CCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 556789999987633322110 0111122222222 222456 4455433 444443333488877653
Q ss_pred e----cCCCCeeE-------------------EEEcCCCCEEEEE-----eCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 565 L----NSSNLVCS-------------------LSFDRDGELFAAA-----GVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 565 ~----~h~~~V~~-------------------i~f~~~~~~lat~-----~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
. .+.....+ +.|+|+++.++.+ ..+..|.+||+.++. ......+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~~~~~ 186 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--------LEVIHQD 186 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--------EEEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--------EEeeccC
Confidence 2 13333333 3567777766554 356689999986521 1122245
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCC--CcEEEEEEecCCCCEEEEEECC-----C
Q 005147 617 RSKLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHE--RRVWSIDFSSADPTLLASGSDD-----G 683 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~--~~v~sv~fsp~~~~~l~sgs~D-----~ 683 (712)
...+..+.|+|.++..|+..+.+ ..|.+||+..++.. .+..+. ..+..++|+| +++.|+.++.+ +
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECC-CCCEEEEEecCCCCccc
Confidence 66789999999446666665543 36888898766533 343342 3688899998 88877777654 4
Q ss_pred cEEEEeCCCCcEE
Q 005147 684 SVKLWSINQAILL 696 (712)
Q Consensus 684 ~v~lWd~~~~~~v 696 (712)
.|.+||+.+++..
T Consensus 265 ~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 265 VIYKANPETLENE 277 (396)
T ss_dssp EEEEECTTTCCEE
T ss_pred eEEEEECCCCCeE
Confidence 4999999887654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.6e-07 Score=103.31 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=87.5
Q ss_pred cCCCCeeEEEEcCCCCEEE-----EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 566 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~la-----t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+|...+.+++|+|||++|| .|+.+..|++||+.++...... .. .......++|+| ++..|+.++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~------~~-~~~~~~~~~wsp-Dg~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD------VI-EGGKYATPKWTP-DSKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC------CB-SCCTTCCCEECT-TSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc------cc-CcccccceEEec-CCCEEEEEEecC
Confidence 3556788999999999988 4445578999999874321000 01 111226899999 689999999887
Q ss_pred c-------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEECCC----cEEEEeCCCCc
Q 005147 641 V-------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDG----SVKLWSINQAI 694 (712)
Q Consensus 641 ~-------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~----~v~lWd~~~~~ 694 (712)
. |.+|++.+++ .+.....|...+.++.|+| ||++|+.++.++ .|.+||..++.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 6 9999999876 4444455667899999998 899888887766 67777765554
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=1e-05 Score=86.15 Aligned_cols=163 Identities=9% Similarity=-0.017 Sum_probs=106.6
Q ss_pred CceeeccCCCccce-----ecccCCCCCCc-EEEEEcCCc--EEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEE
Q 005147 520 NNLGSKEGYSEGRR-----SGWINPFLEGL-CKYLSFSKL--RVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAA 586 (712)
Q Consensus 520 ~~~~l~gh~~~~~~-----~~~~~~~~~~~-~~~~~~~~~--~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~ 586 (712)
+...+..|...... ..| +.||. +.+.+..++ .++ |++.+++.. ++...+.++.|+||++.|+.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCF---TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCB---CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred ceEEecCCcccccchhhcCccC---CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 34455666554444 556 45554 444444344 344 888877654 244455577899999999999
Q ss_pred eCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEE--cCCCCCEEEEE----------------------eCCCcE
Q 005147 587 GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASS----------------------NFEGVV 642 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~p~~~~~lasg----------------------s~Dg~V 642 (712)
+.++.|++||+.++.. ......+...+....| +| ++.+++.. +.++.|
T Consensus 99 ~~~~~l~~~d~~~g~~-------~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEE-------NVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp ETTTEEEEEETTTCCE-------EEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred eCCCeEEEEECCCCcc-------eeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 9999999999976321 1112223333434444 77 57777642 245789
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC------CcEEEEeCCCCc
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD------GSVKLWSINQAI 694 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D------~~v~lWd~~~~~ 694 (712)
.+||+.+++.. .+..+...+..++|+|.|+..|+.++.+ ..|.+||+..+.
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred EEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 99999998754 4556778899999997578888877763 378888876543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.32 E-value=4.4e-06 Score=85.58 Aligned_cols=144 Identities=10% Similarity=0.004 Sum_probs=103.9
Q ss_pred cEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEEcCCccccCcccccceEE--ecCCCCe
Q 005147 544 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVE--MASRSKL 620 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~-d~~I~iwD~~~~~~~~~~~~~~~~~--~~~~~~v 620 (712)
.+..++. +++++|.+..+ ....+.++.+.++|+++++.+. +++|..+|... . ......... ..+....
T Consensus 57 ~V~~~d~-~G~~~W~~~~~----~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k---~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAP----AGCEMQTARILPDGNALVAWCGHPSTILEVNMKG-E---VLSKTEFETGIERPHAQF 127 (276)
T ss_dssp EEEEECT-TSCEEEEEECC----TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTS-C---EEEEEEECCSCSSGGGSC
T ss_pred CEEEECC-CCCEEEEEcCC----CCccccccEECCCCCEEEEecCCCCEEEEEeCCC-C---EEEEEeccCCCCcccccc
Confidence 3555555 67777877653 2346788999999999999887 77777776532 1 000000000 0111234
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+++.+ +++++++...++.|.+||.. |+.+.++..+ ..+.++.+.| +++++++++.+++|..+|..+|+.+-++-
T Consensus 128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp SCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred cCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 4566777 69999999999999999998 9999999865 4566788886 89999999999999999999999987774
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=5.9e-05 Score=85.30 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=101.4
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC--CccccCcccccceEEec
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMA 615 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~--~~~~~~~~~~~~~~~~~ 615 (712)
....++.+.+++..+++++..+.. ...+..+.|+|||+++++++.|+.|.+||+. +. ..+....
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~ 237 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIK 237 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEE
T ss_pred EeCCCCeEEEEECCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEe
Confidence 334455555555555555554443 3345689999999999999999999999995 31 1222333
Q ss_pred CCCCeEEEEEcC---CCCCEEEEEeC-CCcEEEEECCCCcEEEEecc----------CCC--------------------
Q 005147 616 SRSKLSSICWNS---YIKSQIASSNF-EGVVQVWDVSRSQVLTEMRE----------HER-------------------- 661 (712)
Q Consensus 616 ~~~~v~~v~~~p---~~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~----------H~~-------------------- 661 (712)
.......++|++ .++++++++++ +++|.++|..+.+++.++.. |..
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 344567899993 25777666664 59999999999888776531 111
Q ss_pred -------------------------cEEEEEEecCCCCEEEEEE-CCCcEEEEeCCCCcEEEEEec
Q 005147 662 -------------------------RVWSIDFSSADPTLLASGS-DDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 662 -------------------------~v~sv~fsp~~~~~l~sgs-~D~~v~lWd~~~~~~v~~~~~ 701 (712)
...++.|+| ++.++++++ .+++|.+||+.+++.+..+.-
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEecCCCccceeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 122457887 788766655 688999999999987766543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-05 Score=81.86 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=104.3
Q ss_pred ccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCC--ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 525 KEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQG--DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~--~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
..+...+.+..| ..++. +.+.+...+.+. |+..++ .+..+...+.+++|+++|+++++...++.|.+||..++
T Consensus 24 ~~~~~~~eg~~~---d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 24 ADGFTWTEGPVY---VPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp ECCCSSEEEEEE---EGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred ecCCccccCCeE---eCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 344455567777 33443 444444444544 777765 12235677999999999999888777899999998653
Q ss_pred cccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE----eC-------------CCcEEEEECCCCcEEEEeccCCCcE
Q 005147 601 INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS----NF-------------EGVVQVWDVSRSQVLTEMREHERRV 663 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg----s~-------------Dg~V~lwD~~~~~~~~~~~~H~~~v 663 (712)
..... ...........++.++++| ++++++|. +. .+.|..+|.. ++ +..+..+....
T Consensus 101 ~~~~~---~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 101 EWESI---ADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp CEEEE---ECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred cEEEE---eeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 21000 0000001123467899999 58888873 21 2455555554 44 44556677888
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCC-CCcE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSIN-QAIL 695 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~-~~~~ 695 (712)
+.++|+| +++++++.+.++.|.+||+. ++..
T Consensus 175 ~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 175 NGLAFLP-SGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEEECT-TSCEEEEETTTTEEEEEEECSSSCE
T ss_pred ccEEECC-CCCEEEEeCCCCeEEEEEECCCCcC
Confidence 9999998 88888888889999999997 4543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.5e-05 Score=81.57 Aligned_cols=148 Identities=9% Similarity=0.000 Sum_probs=110.3
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+.+..++.+.+++..+++++|.+..+. ...+.++.++|+|++++ +.++.|..||. ++.. ... .....
T Consensus 9 v~~~~~~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~-----~W~-~~~~~ 75 (276)
T 3no2_A 9 VGGSGWNKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILF--SYSKGAKMITR-DGRE-----LWN-IAAPA 75 (276)
T ss_dssp EECTTCSEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCE-----EEE-EECCT
T ss_pred EeeCCCCEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCE-----EEE-EcCCC
Confidence 456778888999988899998887532 14678999999999988 35788999997 3211 000 11122
Q ss_pred CCCeEEEEEcCCCCCEEEEEeC-CCcEEEEECCCCcEEEEecc------CCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 617 RSKLSSICWNSYIKSQIASSNF-EGVVQVWDVSRSQVLTEMRE------HERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~------H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
...+.++.+.| +++++++.+. ++.|..+|. +|+.+.++.. +....+.+++.+ +++++++.+.++.|.+||
T Consensus 76 ~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 76 GCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIA 152 (276)
T ss_dssp TCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEEC
T ss_pred CccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEEC
Confidence 34688899998 6889888877 888888885 7888877752 223456678886 999999999999999999
Q ss_pred CCCCcEEEEEec
Q 005147 690 INQAILLLHLVD 701 (712)
Q Consensus 690 ~~~~~~v~~~~~ 701 (712)
.. |+.+-++-.
T Consensus 153 ~~-G~~~w~~~~ 163 (276)
T 3no2_A 153 PN-GQLLNSVKL 163 (276)
T ss_dssp TT-SCEEEEEEC
T ss_pred CC-CCEEEEEEC
Confidence 98 988876643
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-05 Score=93.25 Aligned_cols=131 Identities=6% Similarity=-0.008 Sum_probs=89.3
Q ss_pred EEccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCc----------------EEEEEcCCccccCcccccceEE-ecC
Q 005147 557 ADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKK----------------IKVFECDAIINENRDIHYPVVE-MAS 616 (712)
Q Consensus 557 ~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~----------------I~iwD~~~~~~~~~~~~~~~~~-~~~ 616 (712)
|++.+++... ....+.+++|+|||+.|+.++.++. |++|++.+..... ..+.. ..+
T Consensus 156 ~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~~v~~~~~~ 231 (710)
T 2xdw_A 156 MKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED----ILCAEFPDE 231 (710)
T ss_dssp EETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC----EEEECCTTC
T ss_pred EECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc----eEEeccCCC
Confidence 5555554331 1122678999999999999888766 9999997632110 11111 224
Q ss_pred CCCeEEEEEcCCCCCEEEEEeC-----CCcEEEEECCC------Cc-EEEEeccCCCcEEEEEEecCCCCEEEEEECC--
Q 005147 617 RSKLSSICWNSYIKSQIASSNF-----EGVVQVWDVSR------SQ-VLTEMREHERRVWSIDFSSADPTLLASGSDD-- 682 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~-----Dg~V~lwD~~~------~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D-- 682 (712)
...+..++|+| ++.+|+.++. +..|.+||+.+ +. .+..+..|...+.. .|+| ++..|+..+.+
T Consensus 232 ~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 232 PKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHS 308 (710)
T ss_dssp TTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTC
T ss_pred CeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec-cCCEEEEEECCCC
Confidence 55678999999 5888877765 56899999987 53 46677777777765 4887 77766666553
Q ss_pred --CcEEEEeCCCCc
Q 005147 683 --GSVKLWSINQAI 694 (712)
Q Consensus 683 --~~v~lWd~~~~~ 694 (712)
..|.+||+.++.
T Consensus 309 ~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 309 PNYRLINIDFTDPE 322 (710)
T ss_dssp TTCEEEEEETTSCC
T ss_pred CCCEEEEEeCCCCC
Confidence 369999998764
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.25 E-value=9.4e-06 Score=85.12 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=82.4
Q ss_pred EEccCCceecCCCCeeEEEEcCCCCEEEEEeCC---Cc--EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 557 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 557 ~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d---~~--I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
|++.++....- ..+.++.|+|||+.||.++.+ +. |.+||+.++. ......... +.+++|+| +++
T Consensus 48 ~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wsp-dg~ 116 (347)
T 2gop_A 48 ENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNE-DSR 116 (347)
T ss_dssp EETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECT-TSS
T ss_pred EeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECC-CCC
Confidence 55554432111 567889999999999888754 33 7777775421 111122223 89999999 588
Q ss_pred EEEEEeCC---------------------------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC-
Q 005147 632 QIASSNFE---------------------------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG- 683 (712)
Q Consensus 632 ~lasgs~D---------------------------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~- 683 (712)
.|+.++.+ ..|.+||+.+++.+..+.. . .+.+++|+| ++ ++++++.+.
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~ 192 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREI 192 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCS
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccc
Confidence 88877642 5699999999887566655 4 888999998 88 888887653
Q ss_pred ------cEEEEeCCCCc
Q 005147 684 ------SVKLWSINQAI 694 (712)
Q Consensus 684 ------~v~lWd~~~~~ 694 (712)
...||.+.+++
T Consensus 193 ~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 193 IPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp SCCSSCCEEEEEEETTE
T ss_pred cccccccccEEEeCCCc
Confidence 44555544443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.7e-05 Score=78.86 Aligned_cols=156 Identities=11% Similarity=0.072 Sum_probs=101.2
Q ss_pred CCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCceec--------CCCCeeEEEEcCCCCEEEEEeC---------
Q 005147 527 GYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDLLN--------SSNLVCSLSFDRDGELFAAAGV--------- 588 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~~~--------h~~~V~~i~f~~~~~~lat~~~--------- 588 (712)
+...+.++.+ ..+|.+.++......+ +|+..++.+.. ....+.+++++|+|++++|.+.
T Consensus 67 ~~~~~~~l~~---~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 67 PSHHQNGHCL---NKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp SCSSEEEEEE---CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred CCCCcceeeE---CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 3334455555 3456555555443444 47776665431 1345678999999999888421
Q ss_pred --------CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC-CCcE---EEEe
Q 005147 589 --------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-RSQV---LTEM 656 (712)
Q Consensus 589 --------d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~-~~~~---~~~~ 656 (712)
.+.|..||... .......+....+.++|+| +++.+++.+.++.|.+||+. ++.. ...+
T Consensus 144 ~~~~~~~~~~~l~~~~~~g---------~~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPDG---------TLSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp SCCCCCSSSCEEEEECTTS---------CEEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred ccccccCCCcEEEEECCCC---------CEEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence 23444444321 1122234556678999999 57777888888999999997 5554 3444
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 657 ~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
..+...+.++++++ +|.+.++. ++.|.+||.. ++.+..+
T Consensus 214 ~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 214 TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 44566778899997 88877776 8899999987 6666544
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.22 E-value=9.6e-06 Score=85.04 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=80.3
Q ss_pred EEccCCce-e--cCCCCeeEEEEcCCCCEEEEEeCCC-------cEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 557 ADLNQGDL-L--NSSNLVCSLSFDRDGELFAAAGVNK-------KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 557 ~dl~~~~~-~--~h~~~V~~i~f~~~~~~lat~~~d~-------~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
|++.++.. . ... .+.++.|+|+| ++++++.+. ...||.++++ . ......+ ..+.++ +
T Consensus 157 ~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-----~---~~~l~~~-~~~~~~--s 223 (347)
T 2gop_A 157 FDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-----K---EEKMFEK-VSFYAV--D 223 (347)
T ss_dssp EETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-----E---EEEEEEE-ESEEEE--E
T ss_pred EECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-----c---eEEeccC-cceeeE--C
Confidence 88877764 2 123 78899999999 888876652 4566655421 1 1111122 344444 8
Q ss_pred CCCCCEEEEEeCC--------CcEEEEECCCCcEEEEeccCCCcEEE-EEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 627 SYIKSQIASSNFE--------GVVQVWDVSRSQVLTEMREHERRVWS-IDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 627 p~~~~~lasgs~D--------g~V~lwD~~~~~~~~~~~~H~~~v~s-v~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
| +++.|+.++.+ ..|.+|| +++......+|...+.. +.|+ ++ ++++++.|+.++|| +.+++.
T Consensus 224 p-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 224 S-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp E-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSE
T ss_pred C-CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCce
Confidence 8 58888777644 3688888 66665555667788886 8998 67 99999999999999 876554
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=86.79 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=91.1
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc----cCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~----~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
.++.+++++...+|++|+.+ .+++|++..... .... ..+.....+.. |+.|+| ++++|+++ .+|.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~-~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP-LTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC-CCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc-ccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 68899999999999999987 666799865320 0011 22323445666 999999 58899999 88999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
|+++.........|+.++.++.+.+ ++ +++++.||.|.+||+.++...
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~--p~-~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVN--NT-LVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECS--SE-EEEEETTSEEEEEETTTCCEE
T ss_pred EchhhhccCccceeecceeeEEecC--CC-EEEEECCCCEEEEEccCCccc
Confidence 9998877667778889999988875 23 888999999999999987754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.3e-05 Score=93.43 Aligned_cols=130 Identities=7% Similarity=-0.044 Sum_probs=87.7
Q ss_pred EEccCCcee-c-CCCCe--eEEEEcCCCCEEEEEeCCCc-------------EEEEEcCCccccCcccccceE-EecCCC
Q 005147 557 ADLNQGDLL-N-SSNLV--CSLSFDRDGELFAAAGVNKK-------------IKVFECDAIINENRDIHYPVV-EMASRS 618 (712)
Q Consensus 557 ~dl~~~~~~-~-h~~~V--~~i~f~~~~~~lat~~~d~~-------------I~iwD~~~~~~~~~~~~~~~~-~~~~~~ 618 (712)
|++.++... . +...+ .+++|+|||+.|+.++.|.. |++|++.+..... ..+. ...+..
T Consensus 152 ~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~lv~~~~~~~~ 227 (695)
T 2bkl_A 152 IDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----TVVHERTGDPT 227 (695)
T ss_dssp EETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----EEEECCCCCTT
T ss_pred EECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----eEEEecCCCCE
Confidence 666666544 1 22223 68999999999999998876 9999997642211 1111 223456
Q ss_pred CeEEEEEcCCCCCEEEEEeCCC----cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCC
Q 005147 619 KLSSICWNSYIKSQIASSNFEG----VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS---DDGSVKLWSIN 691 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg----~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~ 691 (712)
.+.++.|+| ++.+|+.++.++ .|.+||..++. ...+..+...+....|+ ++.+++++. .++.|.+||+.
T Consensus 228 ~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~--~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 228 TFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAW--KDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp CEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEE--TTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEec--CCcEEEEECCCCCCCEEEEEeCC
Confidence 788999999 588887777665 67777766554 44555666777777774 455555544 26889999998
Q ss_pred CCc
Q 005147 692 QAI 694 (712)
Q Consensus 692 ~~~ 694 (712)
++.
T Consensus 304 ~~~ 306 (695)
T 2bkl_A 304 KPA 306 (695)
T ss_dssp BCS
T ss_pred CCC
Confidence 765
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.17 E-value=2.6e-05 Score=78.53 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=102.4
Q ss_pred CCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 541 LEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
.+|.+.+++...+.+. ++..+.... .....+.+++++++++++++...++.|.+||...... ......
T Consensus 117 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~ 189 (270)
T 1rwi_B 117 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-------VVLPFT 189 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-------EECCCS
T ss_pred CCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-------Eeeccc
Confidence 3566666655555544 654433221 1234678999999999888887889999999865211 011112
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
....+.+|++++ ++.++++...++.|.+||............+...+.+++++| ++.++++.+.+++|.++++...+.
T Consensus 190 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 190 DITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp SCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcCCCccc
Confidence 235688999998 478888887889999999876544332233446789999997 889999999999999999876554
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.16 E-value=6.5e-06 Score=96.61 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCCeeEEEEcCCCCEEEEEeCC-----CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc-
Q 005147 568 SNLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 641 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d-----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~- 641 (712)
...+.+++|+|||++||.++.+ ..|++||+.++.. +....+...+..++|+| + +.|+.++.|+.
T Consensus 162 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--------~~~~~~~~~~~~~~wsp-D-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 162 ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--------LADELKWVKFSGLAWLG-N-DALLYSRFAEPK 231 (741)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--------EEEEEEEEESCCCEEST-T-SEEEEEECCCC-
T ss_pred CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------CCccCCCceeccEEEEC-C-CEEEEEEecCcc
Confidence 3467899999999999887654 4699999977422 11111112245789999 5 77777776654
Q ss_pred -------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEECCC-----cEEEEeCCCC
Q 005147 642 -------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDG-----SVKLWSINQA 693 (712)
Q Consensus 642 -------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~-----~v~lWd~~~~ 693 (712)
|.+|++.+++ .+.....|...+.++.|+| ||++|+..+.++ .|.+||+.++
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCC
Confidence 8999998875 3333333445689999998 999888877654 8999999876
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.16 E-value=6.9e-05 Score=75.29 Aligned_cols=144 Identities=11% Similarity=0.126 Sum_probs=100.0
Q ss_pred CCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 542 EGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+|.+.+... ...+. ++....... .....+.++++++++.++++...++.|.+||..+... .......
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~~ 148 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-------TVLPFTG 148 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-------EECCCCS
T ss_pred CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-------Eeecccc
Confidence 444444444 33333 665543322 2236789999999999888888889999997644211 0111122
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
...+.+++++| +++++++...++.|.+||............+...+.+|+++| ++.++++...++.|.+||......
T Consensus 149 ~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 149 LNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCC
T ss_pred CCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcc
Confidence 34578899998 578888877889999999987765544444457789999997 888888888899999999876443
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.13 E-value=4.3e-05 Score=79.66 Aligned_cols=120 Identities=13% Similarity=0.034 Sum_probs=88.0
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC----Cc
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE----GV 641 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D----g~ 641 (712)
.+...+.+++|++++++++++..++.|.+||..+... ......+...+.+++|+| ++++++++..+ +.
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-------EEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCce
Confidence 4566789999999999888888899999999865211 111124557799999998 57888877766 68
Q ss_pred EEEEECCCCcEEEEec--cCCCcEEEEEEecCCCCEEEEEEC------CCcEEEEeCCCCc
Q 005147 642 VQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSD------DGSVKLWSINQAI 694 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~--~H~~~v~sv~fsp~~~~~l~sgs~------D~~v~lWd~~~~~ 694 (712)
|.+||..++.....+. .+...+++++++| ++.++++.+. .+.|..||..+++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 9999998876543333 3456799999998 8888887764 2456666665444
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.9e-05 Score=79.70 Aligned_cols=151 Identities=11% Similarity=0.122 Sum_probs=102.1
Q ss_pred CCcEEEEEcC-CcEE-EEEccCCceec---CCCCeeEEEEcCCCCEEEEEeCC----------CcEEEEEcCCccccCcc
Q 005147 542 EGLCKYLSFS-KLRV-KADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRD 606 (712)
Q Consensus 542 ~~~~~~~~~~-~~~v-~~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d----------~~I~iwD~~~~~~~~~~ 606 (712)
++.+.++++. ...+ ++|+.++++.. ......++.++|+|++++++..+ +.|.+||..+..
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----- 214 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT----- 214 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-----
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-----
Confidence 4455555541 3333 37777665442 23345688999999987777654 789999987521
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE--eccCCCcEEEEEEecCCCCEEEEE----E
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASG----S 680 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~--~~~H~~~v~sv~fsp~~~~~l~sg----s 680 (712)
... ............++|+| ++..|+.++. .|.+||..+++.... +..+....+.++++|.++.+.++. +
T Consensus 215 v~~-~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 215 VEK-QFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp EEE-EEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred EEE-EEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 111 11222234688999999 4777776655 899999998875321 222246789999998778888888 7
Q ss_pred CCCcEEEEeCCCCcEEEEEece
Q 005147 681 DDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.+++|.+||.. ++.+.++--+
T Consensus 291 ~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 291 QQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp SEEEEEEECTT-CCEEEEEEEE
T ss_pred cCCEEEEECCC-CCEEEEEEec
Confidence 88999999998 8888776533
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.10 E-value=4e-05 Score=81.65 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=97.1
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccc
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYP 610 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~ 610 (712)
.++.+.+++..+++++..+..+ ..+ .+.|+||+++++++. .++.|.+||..+... ...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-----~~~ 96 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-----EKE 96 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-----EEE
T ss_pred ccCeEEEEECCCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-----EEE
Confidence 3556666665566555443332 233 899999999888876 367899999875211 111
Q ss_pred eEEe----cCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCC
Q 005147 611 VVEM----ASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 611 ~~~~----~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~ 683 (712)
+... .+......++++| ++++|+++++ +++|.+||+.+++.+.+ +.. ...+.+.+.|..+..+++.+.||
T Consensus 97 i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp EEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTS
T ss_pred EEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCC
Confidence 1111 1234567899999 5888888875 58999999999999888 653 33456778885557889999999
Q ss_pred cEEEEeCCC-CcEE
Q 005147 684 SVKLWSINQ-AILL 696 (712)
Q Consensus 684 ~v~lWd~~~-~~~v 696 (712)
++.+|++.. ++..
T Consensus 174 ~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 174 GLLTINLGEDGKVA 187 (361)
T ss_dssp SEEEEEECTTSSEE
T ss_pred cEEEEEECCCCcEe
Confidence 999999865 4443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00013 Score=75.08 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=95.1
Q ss_pred CcEEEEEcCCcEEEEEccCCceec---------CCCCeeEEEEcCCCCEEEEEeCC---------------CcEEEEEcC
Q 005147 543 GLCKYLSFSKLRVKADLNQGDLLN---------SSNLVCSLSFDRDGELFAAAGVN---------------KKIKVFECD 598 (712)
Q Consensus 543 ~~~~~~~~~~~~v~~dl~~~~~~~---------h~~~V~~i~f~~~~~~lat~~~d---------------~~I~iwD~~ 598 (712)
|.+.++....+..+|+.. +++.. ....+.++.++++|+++++...+ +.|..||..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 554555544444446665 44321 12457899999999988887655 456666542
Q ss_pred CccccCcccccceEEecCCCCeEEEEEc----CCCCCE-EEEEeCCCcEEEEECC-CCc-----EEEEeccCC-CcEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWN----SYIKSQ-IASSNFEGVVQVWDVS-RSQ-----VLTEMREHE-RRVWSI 666 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~----p~~~~~-lasgs~Dg~V~lwD~~-~~~-----~~~~~~~H~-~~v~sv 666 (712)
. . ......+......++|+ | +++. +++...++.|.+||.. +++ .+..+..+. ..+..+
T Consensus 162 g--------~-~~~~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 162 G--------Q-MIQVDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp S--------C-EEEEEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred C--------C-EEEeccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 1 0 11112223456789999 8 4654 4555678999999986 454 334455554 678899
Q ss_pred EEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 667 DFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 667 ~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++++ ++.+.++...++.|.+||..+++.+..+
T Consensus 232 ~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 232 DFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEBT-TCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred EECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEE
Confidence 9997 8999999888999999999877655443
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.7e-05 Score=79.15 Aligned_cols=143 Identities=7% Similarity=-0.006 Sum_probs=94.7
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC----
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---- 616 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~---- 616 (712)
.++.+.+++..+++++..+. .......++|++++.++++...++.|.+||..+... .. ....+.
T Consensus 62 ~~~~v~viD~~t~~~~~~i~------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----~~-~i~~g~~~~~ 129 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRIT------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----TG-YIECPDMDME 129 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEE------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----EE-EEECTTCCTT
T ss_pred CCCEEEEEECcccEEEEEcC------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----EE-EEEcCCcccc
Confidence 34444444444444443331 346678999999886666665899999999976311 10 111111
Q ss_pred CCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC----------CcE
Q 005147 617 RSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD----------GSV 685 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----------~~v 685 (712)
......+++. .+.++++.. .++.|.+||..+++.+.++... .....+.++| ++.+++++..+ +.|
T Consensus 130 ~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 130 SGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp TCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred CCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceE
Confidence 1145567772 344444443 4899999999999988887653 3456899997 88888877665 799
Q ss_pred EEEeCCCCcEEEEE
Q 005147 686 KLWSINQAILLLHL 699 (712)
Q Consensus 686 ~lWd~~~~~~v~~~ 699 (712)
.+||..+++.+..+
T Consensus 206 ~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 206 YRIDAETFTVEKQF 219 (328)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEE
Confidence 99999998876554
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.96 E-value=9.8e-06 Score=86.33 Aligned_cols=121 Identities=11% Similarity=-0.017 Sum_probs=83.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEcCCccccCcccccceEEecCCCC-eEEEEEcCCCCCEEEEEeCCCcE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSK-LSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d---~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~-v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
|...+.+++|+|||+.|+.++.. ..|.+||+.++.. .....+... ...+.|+| +++.|+.++.++.|
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------VQLTEGKGDNTFGGFIST-DERAFFYVKNELNL 104 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------EECCCSSCBCTTTCEECT-TSSEEEEEETTTEE
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------EEeecCCCCccccceECC-CCCEEEEEEcCCcE
Confidence 44557888999999998877543 4688888865211 111122222 23478999 69999999999999
Q ss_pred EEEECCCCcEEEEeccCCCcEEE-------------------EEEecCCCCEEEEE-----ECCCcEEEEeCCCCcEEE
Q 005147 643 QVWDVSRSQVLTEMREHERRVWS-------------------IDFSSADPTLLASG-----SDDGSVKLWSINQAILLL 697 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~s-------------------v~fsp~~~~~l~sg-----s~D~~v~lWd~~~~~~v~ 697 (712)
.+||+.+++....+..+...... ++|+| ++..++.+ ..+..|.+||+.+++...
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEV 182 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence 99999998876666655554333 35666 66655544 457789999999877543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.95 E-value=8.4e-05 Score=87.08 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=85.6
Q ss_pred EEccCCceec-C--CCCeeEEEEcCCCCEEEEEeCCCc--------------EEEEEcCCccccCcccccceEE-ecCCC
Q 005147 557 ADLNQGDLLN-S--SNLVCSLSFDRDGELFAAAGVNKK--------------IKVFECDAIINENRDIHYPVVE-MASRS 618 (712)
Q Consensus 557 ~dl~~~~~~~-h--~~~V~~i~f~~~~~~lat~~~d~~--------------I~iwD~~~~~~~~~~~~~~~~~-~~~~~ 618 (712)
|++.+++... + ...+.+++|+|| +.|+.++.++. |++|++.+..... ..+.. ..+..
T Consensus 194 ~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~~~~~~~~ 268 (741)
T 1yr2_A 194 VGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVFATPELPK 268 (741)
T ss_dssp EETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEECCTTCTT
T ss_pred EECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEeccCCCCe
Confidence 6666665432 1 112357899999 98888887654 8999986632111 11111 12233
Q ss_pred CeEEEEEcCCCCCEEEEEeCCC-----cEEEEECCCC--cEEEEeccCCCcEEEEEEecCCCCEEEEEECC----CcEEE
Q 005147 619 KLSSICWNSYIKSQIASSNFEG-----VVQVWDVSRS--QVLTEMREHERRVWSIDFSSADPTLLASGSDD----GSVKL 687 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg-----~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----~~v~l 687 (712)
.+.++.|+| ++.+|+.++.++ .|.+||+.++ .+...+..+...+.... +| ++..|+..+.+ +.|.+
T Consensus 269 ~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 269 RGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp CEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEE
T ss_pred EEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEE
Confidence 588999999 688888777554 7999999887 42556666666666554 46 78877777764 45999
Q ss_pred EeCCCC
Q 005147 688 WSINQA 693 (712)
Q Consensus 688 Wd~~~~ 693 (712)
||+.++
T Consensus 346 ~d~~~~ 351 (741)
T 1yr2_A 346 VDLSGS 351 (741)
T ss_dssp EECSSS
T ss_pred EeCCCC
Confidence 999875
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=5e-06 Score=84.21 Aligned_cols=84 Identities=14% Similarity=-0.027 Sum_probs=60.1
Q ss_pred CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh----------------
Q 005147 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---------------- 100 (712)
Q Consensus 37 H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs---------------- 100 (712)
+.++..+++ ++. .....+++++.+.|.+|.+.+. +......++.++.++|..||+
T Consensus 69 ~~~vP~v~~-~~~--~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~ 139 (263)
T 3tm0_A 69 KLPVPKVLH-FER--HDGWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRL 139 (263)
T ss_dssp TSCCCCEEE-EEE--ETTEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHH
T ss_pred CCCCCeEEE-EEe--cCCceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHH
Confidence 555666665 332 1223344444458999988641 233455788999999999999
Q ss_pred -------------------------------------------cCceeccCCCCceeecCCCcEEEEecccc
Q 005147 101 -------------------------------------------QGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 101 -------------------------------------------~gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.+++|+|++|.||+++..+.+.+|||+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 140 AELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 56999999999999986555679999876
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00097 Score=67.54 Aligned_cols=118 Identities=13% Similarity=0.045 Sum_probs=88.2
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++++++++.++++...++.|..||.... ............+.++++.| ++.++++...++.|..||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGI-------IKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-------EEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-------EEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC
Confidence 567899999999998888777889999997421 01111112455788999998 5788888888899999999
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+++... ....+...+.+++++| ++.+.++...++.|..||. +++..
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEE
T ss_pred -CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 665433 2334556789999997 8888888777899999999 66544
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00016 Score=81.78 Aligned_cols=114 Identities=8% Similarity=-0.024 Sum_probs=88.6
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC--CCcEEEE
Q 005147 578 RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS--RSQVLTE 655 (712)
Q Consensus 578 ~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~--~~~~~~~ 655 (712)
+.+.++++...+++|.+||..+. ..+........+.++.|+| +++++++++.|+.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 44557788888999999999762 1233344455677999999 69999999999999999996 8888888
Q ss_pred eccCCCcEEEEEEec---CCCCEEEEEEC-CCcEEEEeCCCCcEEEEEec
Q 005147 656 MREHERRVWSIDFSS---ADPTLLASGSD-DGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp---~~~~~l~sgs~-D~~v~lWd~~~~~~v~~~~~ 701 (712)
+... .....++|+| .||++++.++. +++|.++|..+.+.+..+.-
T Consensus 236 i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 236 IKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 8753 3457899993 28887776664 79999999999998877653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00028 Score=72.43 Aligned_cols=120 Identities=7% Similarity=0.074 Sum_probs=87.4
Q ss_pred CCCeeEEEEc----CCCCEE-EEEeCCCcEEEEEcCC-ccccCcccccceEEe-cCC-CCeEEEEEcCCCCCEEEEEeCC
Q 005147 568 SNLVCSLSFD----RDGELF-AAAGVNKKIKVFECDA-IINENRDIHYPVVEM-ASR-SKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 568 ~~~V~~i~f~----~~~~~l-at~~~d~~I~iwD~~~-~~~~~~~~~~~~~~~-~~~-~~v~~v~~~p~~~~~lasgs~D 639 (712)
.....+++|+ |+++.+ ++...++.|.+||+.. +.. ......... .+. ..+..+++++ +++++++...+
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~ 246 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---ENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGS 246 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---EEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETT
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---ccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCC
Confidence 3456889999 999654 5555689999999752 100 000011111 222 5578899998 58888888888
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCC
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~ 692 (712)
+.|.+||..+++.+..+..+...+.+++|+| ++. ++++.+.++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999988887777777778999999997 888 556666678999999875
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0013 Score=67.41 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=95.6
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceec--------CCCCeeEEEEcCCCCEEEEEeCC---------CcEEEEEcCCcccc
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLN--------SSNLVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINE 603 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~--------h~~~V~~i~f~~~~~~lat~~~d---------~~I~iwD~~~~~~~ 603 (712)
.+|.+.+.. ..+..+++..++.+.. ....+.++.++|+|+++++.... ....||.+....
T Consensus 63 ~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-- 139 (297)
T 3g4e_A 63 QSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-- 139 (297)
T ss_dssp TTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--
T ss_pred CCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--
Confidence 344433333 3333446666554321 12457899999999977765322 345666664310
Q ss_pred CcccccceEEecCCCCeEEEEEcCCCCC-EEEEEeCCCcEEEEEC--CCCcE-----EEEeccCCCcEEEEEEecCCCCE
Q 005147 604 NRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQVWDV--SRSQV-----LTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 604 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~-~lasgs~Dg~V~lwD~--~~~~~-----~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
. .......-...+.++|+|+ ++ ++++.+.++.|.+||+ .++.. +..+..+......+++++ +|.+
T Consensus 140 ----~-~~~~~~~~~~pngi~~spd-g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~l 212 (297)
T 3g4e_A 140 ----H-VKKYFDQVDISNGLDWSLD-HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKL 212 (297)
T ss_dssp ----C-EEEEEEEESBEEEEEECTT-SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCE
T ss_pred ----C-EEEEeeccccccceEEcCC-CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCE
Confidence 0 1111222345678999994 65 4566667899999997 45542 334444556788999997 8998
Q ss_pred EEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 676 LASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++...++.|.+||..+++.+..+-
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEE
Confidence 8888888999999999888776553
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0023 Score=64.67 Aligned_cols=118 Identities=8% Similarity=-0.053 Sum_probs=88.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
....+.++.+++++.++++...++.|.+||. ++.. ...........+.++++.+ ++.++++...++.|..||
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI------REYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRIT 168 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE------EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE------EEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEc
Confidence 3567899999999998888878889999997 3110 0111122345688999998 478888777788999999
Q ss_pred CCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 647 VSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 647 ~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
. +++.... +..+...+.+++++| ++.+.++...++.|.+||. ++..
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCE
T ss_pred C-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcE
Confidence 9 7765432 344556789999997 7888887777899999999 6654
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00062 Score=72.62 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=95.1
Q ss_pred CCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccce
Q 005147 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPV 611 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~ 611 (712)
++.+.+.+..+++++..+..|. .+ .+.++|||+++.++. .++.|.+||..+.. ....+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~-----~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-----v~~~I 125 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGF-----LP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-----PTADI 125 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-----EEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCC-----CC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe-----EEEEE
Confidence 4677788888888887776542 23 499999999776654 46789999997621 11111
Q ss_pred EEecC------CCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC
Q 005147 612 VEMAS------RSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 612 ~~~~~------~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~ 683 (712)
..+. ......+.|+| ++++++.++. ++.|.++|+.+++.+.++.-- .+ ..+.|.....+++.+.||
T Consensus 126 -~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g~--~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 126 -ELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--DC--YHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp -EETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTS
T ss_pred -ECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--Cc--ceeecCCCceeEEECCCC
Confidence 1111 12456799999 5887777764 689999999999999988532 22 223354567788888999
Q ss_pred cEEEEeCCC-CcE
Q 005147 684 SVKLWSINQ-AIL 695 (712)
Q Consensus 684 ~v~lWd~~~-~~~ 695 (712)
++-+.++.. ++.
T Consensus 200 ~~~~v~~~~~g~v 212 (386)
T 3sjl_D 200 SLAKVAFGTEGTP 212 (386)
T ss_dssp CEEEEECCSSSCC
T ss_pred CEEEEECCCCCeE
Confidence 999999976 554
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.7e-05 Score=82.79 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=67.5
Q ss_pred cceeeccCC--CCCcccccccccccccc-cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh----
Q 005147 28 DGVELTHGD--HLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---- 100 (712)
Q Consensus 28 ~~~~l~~~~--H~ni~~~~~~~~~~~~~-~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs---- 100 (712)
+..++..+. +.++.+++. ++.+... ...|++++++.|..|.+.. ...++..+...++.++++.|..||+
T Consensus 86 E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~ 161 (359)
T 3dxp_A 86 EYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQ 161 (359)
T ss_dssp HHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence 334444443 344566555 4433322 2244444445787775422 1236788889999999999999997
Q ss_pred ------------------------------------------------------cCceeccCCCCceeecCCCc--EEEE
Q 005147 101 ------------------------------------------------------QGIVVHNVRPSCFVMSSFNH--VSFI 124 (712)
Q Consensus 101 ------------------------------------------------------~gIvHrDLkP~NIll~~~~~--vkl~ 124 (712)
.+++|+|++|.||+++.++. +.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~vi 241 (359)
T 3dxp_A 162 AIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVL 241 (359)
T ss_dssp TTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEEC
T ss_pred hccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEE
Confidence 46999999999999997653 6899
Q ss_pred eccccc
Q 005147 125 ESASCS 130 (712)
Q Consensus 125 dfg~~~ 130 (712)
||+.+.
T Consensus 242 Dwe~a~ 247 (359)
T 3dxp_A 242 DWELST 247 (359)
T ss_dssp CCTTCE
T ss_pred Cccccc
Confidence 999873
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00011 Score=85.42 Aligned_cols=129 Identities=17% Similarity=0.208 Sum_probs=84.8
Q ss_pred EEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe-----CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC
Q 005147 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-----VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY 628 (712)
Q Consensus 554 ~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~-----~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 628 (712)
.++.|...-. .+|...+.+++|+|||++||-+. ....|++||+.++.. +.......+..+++|+
T Consensus 115 ~vllD~n~la-~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~--------~~~~~~~~k~~~~~Ws-- 183 (693)
T 3iuj_A 115 EVFLDPNTLS-PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP--------LETPLKDVKFSGISWL-- 183 (693)
T ss_dssp EEEECGGGGS-TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE--------EEEEEEEEESCCCEEE--
T ss_pred EEEEehhhcc-CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC--------CccccCCceeccEEEe--
Confidence 4555554311 12556788999999999888533 335799999987421 1111111123578999
Q ss_pred CCCEEEEEeCCCc-------------EEEEECCCCc----EEEEecc-CCCcEEEEEEecCCCCEEEEEE-C---CCcEE
Q 005147 629 IKSQIASSNFEGV-------------VQVWDVSRSQ----VLTEMRE-HERRVWSIDFSSADPTLLASGS-D---DGSVK 686 (712)
Q Consensus 629 ~~~~lasgs~Dg~-------------V~lwD~~~~~----~~~~~~~-H~~~v~sv~fsp~~~~~l~sgs-~---D~~v~ 686 (712)
+++.|+.++.+.. |.+|++.+++ .+..... |...+.++.|+| |+++|+..+ . +..|.
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLY 262 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEE
Confidence 4788888877743 9999998765 3444444 666788999998 888764433 2 35899
Q ss_pred EEeCCCCc
Q 005147 687 LWSINQAI 694 (712)
Q Consensus 687 lWd~~~~~ 694 (712)
+||+.++.
T Consensus 263 ~~d~~~~~ 270 (693)
T 3iuj_A 263 VKDLSQEN 270 (693)
T ss_dssp EEETTSTT
T ss_pred EEECCCCC
Confidence 99998764
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.63 E-value=6.5e-06 Score=88.13 Aligned_cols=143 Identities=11% Similarity=0.092 Sum_probs=71.4
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
.+..++.+..++..+++++|.... +.+.+..+..++..+++++.|+.|+.||..++...... ..........
T Consensus 14 ~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~~~ 85 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELVQA 85 (369)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHHTT
T ss_pred EEcCCCEEEEEECCCCCEEEEecC-------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccccc
Confidence 345677778888888888887764 23333444556778888889999999999764321100 0000000011
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+++ +. .+..+++|+.|+.|..||..+|+.+.++..+. .+.++| ++..+++|+.|+.|..||.++|+.+-
T Consensus 86 sp~----~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 SPC----RS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CSC----C-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred Cce----Ee--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEEE
Confidence 111 11 24577888899999999999999998887654 245677 78889999999999999999998654
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
++
T Consensus 155 ~~ 156 (369)
T 2hz6_A 155 NA 156 (369)
T ss_dssp EE
T ss_pred eE
Confidence 43
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0015 Score=70.71 Aligned_cols=152 Identities=8% Similarity=-0.046 Sum_probs=98.9
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENR 605 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~ 605 (712)
.++.| ..++.+.+++....++. |++.++.+. ....... ++|+++++.++++..++ .|.+||......
T Consensus 134 ~~la~---d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--- 206 (409)
T 3hrp_A 134 WGIAA---VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--- 206 (409)
T ss_dssp EEEEE---CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---
T ss_pred eEEEE---eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce---
Confidence 34555 35666666666556655 888766543 2233334 99999999888888766 788888754211
Q ss_pred ccccce-EEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE----eccCCCcE--EEEEEecCCCCEEE
Q 005147 606 DIHYPV-VEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE----MREHERRV--WSIDFSSADPTLLA 677 (712)
Q Consensus 606 ~~~~~~-~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~----~~~H~~~v--~sv~fsp~~~~~l~ 677 (712)
.... .... ....+.+++++|.++.++ .++.++.|..||..++..... ..++...- ..++|+|.++.+++
T Consensus 207 --~~~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 --PTRIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp --EEEEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred --eEEeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 0000 0012 345678999999545544 477889999999987764322 22232222 38999986688888
Q ss_pred EEECCCcEEEEeCCCC
Q 005147 678 SGSDDGSVKLWSINQA 693 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~ 693 (712)
+-+.+++|..|+....
T Consensus 284 ~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE 299 (409)
T ss_dssp EETTTTEEEEECTTCC
T ss_pred EeCCCCEEEEEecCCC
Confidence 8888999999998643
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0034 Score=65.33 Aligned_cols=154 Identities=10% Similarity=0.027 Sum_probs=93.9
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---c-----CCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcC
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---N-----SSNLVCSLSFDRDGELFAAAGVN----KKIKVFECD 598 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~-----h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~ 598 (712)
+.++.| ..+|.+.+.. ..+..+++..++.+. . ....+.++.++|+|+++++...+ ....||.+.
T Consensus 92 v~~i~~---~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 92 GSALAK---ISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EEEEEE---EETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred ceEEEE---eCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 344444 3445444443 334444776665532 1 12458899999999977765422 234455443
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECC--CC-c-----EEEEeccCCCcEEEEEEe
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVS--RS-Q-----VLTEMREHERRVWSIDFS 669 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~--~~-~-----~~~~~~~H~~~v~sv~fs 669 (712)
++. . ..........+.++|+| +++.+ ++.+.++.|.+||+. ++ . .+..+..+.....++++.
T Consensus 168 ~g~-----~---~~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d 238 (326)
T 2ghs_A 168 KGK-----V---TKLFADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 238 (326)
T ss_dssp TTE-----E---EEEEEEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred CCc-----E---EEeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC
Confidence 210 0 11112223567899999 46655 555567899999986 55 3 234444455677889999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+ ++.+.++...++.|.+||. +++.+..+
T Consensus 239 ~-~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 239 A-EGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp T-TSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred C-CCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 6 8888888777889999998 56665544
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0012 Score=67.89 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=93.7
Q ss_pred cceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 531 GRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
+.+..| ..++. +.+.+...+++. |+. ++.. ..+...+.++.|+++|+++++...++.|.+||... ..
T Consensus 47 ~egp~~---~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g-~~--- 118 (305)
T 3dr2_A 47 SEGPAW---WEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADG-QA--- 118 (305)
T ss_dssp EEEEEE---EGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE---
T ss_pred ccCCeE---eCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCC-CE---
Confidence 345566 23333 334444444544 655 3332 23567789999999999877766678899999742 10
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEE----EeC-------------CCcEEEEECCCCcEEEEeccCCCcEEEEEE
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIAS----SNF-------------EGVVQVWDVSRSQVLTEMREHERRVWSIDF 668 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~las----gs~-------------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~f 668 (712)
..............+++++++| ++++++| |.. .+.|..||..+++..... +....+.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 0000000001123467899999 5888886 332 256888888777654333 4456789999
Q ss_pred ecCCCCEEEEEECC------CcEEEEeCCCCc
Q 005147 669 SSADPTLLASGSDD------GSVKLWSINQAI 694 (712)
Q Consensus 669 sp~~~~~l~sgs~D------~~v~lWd~~~~~ 694 (712)
+| |+..|+.+..+ +.|.+||+..+.
T Consensus 196 sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 196 SP-DEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CT-TSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cC-CCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 98 88866666554 789999987654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0033 Score=64.43 Aligned_cols=154 Identities=11% Similarity=0.098 Sum_probs=95.9
Q ss_pred CccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 529 SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL--NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~--~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.-+.+..| ++ .++.+.+.+....++. |+..++... .....+.++.|+++++++++. +..|.+||..+...
T Consensus 13 ~~~Egp~w-~~-~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~--- 85 (297)
T 3g4e_A 13 RCGESPVW-EE-VSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSA--- 85 (297)
T ss_dssp SBEEEEEE-ET-TTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE---
T ss_pred ccccCCeE-EC-CCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcE---
Confidence 34556777 22 2455555565556655 888766532 346789999999999966654 67899999865211
Q ss_pred ccccceEEec---CCCCeEEEEEcCCCCCEEEEEeCC---------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 606 DIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE---------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 606 ~~~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~D---------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
..+.... ....++.++++| +++++++...+ ..-.||.+.....+..+..+-...+.++|+| ++
T Consensus 86 ---~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp-dg 160 (297)
T 3g4e_A 86 ---VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL-DH 160 (297)
T ss_dssp ---EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT-TS
T ss_pred ---EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC-CC
Confidence 0111111 123478899999 57777655332 2345555543222333334456678999998 77
Q ss_pred C-EEEEEECCCcEEEEeC--CCCc
Q 005147 674 T-LLASGSDDGSVKLWSI--NQAI 694 (712)
Q Consensus 674 ~-~l~sgs~D~~v~lWd~--~~~~ 694 (712)
+ ++++.+.++.|.+||+ .++.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCC
T ss_pred CEEEEecCCCCcEEEEeccCCCCc
Confidence 6 4566677899999987 4554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0093 Score=60.13 Aligned_cols=118 Identities=11% Similarity=-0.019 Sum_probs=87.0
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++.+++++.++++...++.|..||... .. ...........+.++++.+ ++.++++...++.|..||.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g-~~------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKG-GF------TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE------EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCC-Ce------EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECC
Confidence 46789999999999888877788999999752 11 1111112346688999998 5788888777889999998
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
. ++... .+......+.++++.| ++.+.++...++.|..||. +++..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEE
T ss_pred C-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEE
Confidence 7 65442 2343456789999997 8888887777889999998 55544
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.51 E-value=3.8e-05 Score=77.15 Aligned_cols=27 Identities=7% Similarity=0.106 Sum_probs=24.1
Q ss_pred ceeccCCCCceeecCCCcEEEEecccc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
++|+|++|.||+++.++.+.++||+.+
T Consensus 186 l~HgDl~~~Nil~~~~~~~~liD~~~a 212 (264)
T 1nd4_A 186 VTHGDACLPNIMVENGRFSGFIDCGRL 212 (264)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred EECCCCCCCcEEEECCcEEEEEcchhc
Confidence 999999999999987666679999987
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0039 Score=66.47 Aligned_cols=138 Identities=11% Similarity=0.018 Sum_probs=90.1
Q ss_pred cEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccc-eE
Q 005147 544 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYP-VV 612 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~-~~ 612 (712)
.+.+++..+++++..+..| ..+ .+.|+||++.+..+. .++.|.+||..+...... +..+ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-----~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~-i~~~~~~ 119 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-----FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIAD-IELPDAP 119 (373)
T ss_pred EEEEEECCCCeEEEEecCC-----CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEE-EECCCcc
Confidence 4556666666665555443 223 899999999888875 367899999975211000 0000 00
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
...+......+.|+| ++++|+.++. ++.|.++| .+++.+.+ +... . ++.+.|.....+++.+.||++.+||
T Consensus 120 ~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 120 RFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred ccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEE
Confidence 000012345789999 5888888774 57899999 99998887 6432 1 2556664556778888899999999
Q ss_pred CCCCcEE
Q 005147 690 INQAILL 696 (712)
Q Consensus 690 ~~~~~~v 696 (712)
. +++.+
T Consensus 194 ~-~g~~~ 199 (373)
T 2mad_H 194 H-AGGAA 199 (373)
T ss_pred C-CCcEE
Confidence 9 77766
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0049 Score=65.67 Aligned_cols=122 Identities=11% Similarity=-0.034 Sum_probs=80.9
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec--------CCCCeEEEEEcCCCCCEEEEEe-------
Q 005147 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIASSN------- 637 (712)
Q Consensus 573 ~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~--------~~~~v~~v~~~p~~~~~lasgs------- 637 (712)
...|.+++..++..+.++.+.+.|+.+.... ......... .......+.++|. ++.++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~---v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d-~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 217 QPAQANKSGRIVWPVYSGKILQADISAAGAT---NKAPIDALSGGRKADTWRPGGWQQVAYLKS-SDGIYLLTSEQSAWK 292 (373)
T ss_pred cceeEecCCEEEEEcCCceEEEEeccCCcce---EeeeeeecCCcccccceecCceEeEEECCC-CCEEEEEeccCCccc
Confidence 3456676655444457789999998642100 000010000 0122334778884 55555543
Q ss_pred ---CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEE-CCCcEEEEeCCCCcEEEEEe
Q 005147 638 ---FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGS-DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ---~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs-~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++.|.++|+.+++.+.++.. ....+++.|+| |++ +++++. .++.|.+||+.+++.+.++.
T Consensus 293 ~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred ccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECCCCCEEeeec
Confidence 246799999999999998863 44689999998 888 777777 59999999999999998753
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=76.66 Aligned_cols=161 Identities=12% Similarity=0.047 Sum_probs=98.0
Q ss_pred ccCCCccceecccCCCCCCcEEEE-EcCC----cEEE-EEccCCceec-CCCCe--eEEEEcCCCCEEEEEeCCCc----
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYL-SFSK----LRVK-ADLNQGDLLN-SSNLV--CSLSFDRDGELFAAAGVNKK---- 591 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~-~~~~----~~v~-~dl~~~~~~~-h~~~V--~~i~f~~~~~~lat~~~d~~---- 591 (712)
++|+..+.+..| +.||...++ .... ..+. +|+.+++... +...+ .+++|+ |++.|+.++.+..
T Consensus 125 ~~~~~~l~~~~~---SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSF---SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEE---CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEE---CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 345545555566 445543332 2111 2233 8888777542 22223 578999 9999998887743
Q ss_pred ---------EEEEEcCCccccCcccccceEE-ec-CCCCeEEEEEcCCCCCEEEEE-e---CCCcEEEEECCCCc-EEEE
Q 005147 592 ---------IKVFECDAIINENRDIHYPVVE-MA-SRSKLSSICWNSYIKSQIASS-N---FEGVVQVWDVSRSQ-VLTE 655 (712)
Q Consensus 592 ---------I~iwD~~~~~~~~~~~~~~~~~-~~-~~~~v~~v~~~p~~~~~lasg-s---~Dg~V~lwD~~~~~-~~~~ 655 (712)
|++|++.+..... ..+.. .. +...+.++.|+| ++.+|+.. + .+..|.+||+.++. ....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~----~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDD----RLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGC----EEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred ccccCCCcEEEEEECCCCcccc----eEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 9999987632211 11221 12 344578899999 57766443 3 23589999998774 4566
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEECC---CcEEEEeCCCCcE
Q 005147 656 MREHERRVWSIDFSSADPTLLASGSDD---GSVKLWSINQAIL 695 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp~~~~~l~sgs~D---~~v~lWd~~~~~~ 695 (712)
+..+....... |+|..+.++++...| +.|.+||+.++..
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 77777776665 565344555555554 6799999987654
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.013 Score=59.12 Aligned_cols=118 Identities=9% Similarity=-0.002 Sum_probs=85.6
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++++++++.++++...++.|..||... .. ...........+.++++.+ +++++++...++.|..||.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~------~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-TI------YEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN 174 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CE------EEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCCC-CE------EEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC
Confidence 46789999999999888877788999998752 10 0011112345688999998 5777777777889999998
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+++... ....+...+.+++++| ++.+.++....+.|.+||. ++...
T Consensus 175 -~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 175 -TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEE
T ss_pred -CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEE
Confidence 665443 2234456789999997 8888887777888999998 45543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00093 Score=72.29 Aligned_cols=116 Identities=9% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEE
Q 005147 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD 646 (712)
....+|+|+++++++++...++.|++||..+... ........... ++|+| +++.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~--------~~~~~~~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV--------TTVHPGFKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE--------EEEEETCCBCB-CEECT-TSSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE--------EEeeccCCCCc-eeEec-CCCcEEEEecCCCceEEEEE
Confidence 4678999999999888888889999999865211 11111122233 99999 588888888876 799999
Q ss_pred CCCCcEEEEe----ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 647 VSRSQVLTEM----REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 647 ~~~~~~~~~~----~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
...+.....+ ..+...+++++++|.++.+++ +..++.|..||..++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE
Confidence 8766544444 325677899999985566555 66688999999987753
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0011 Score=70.72 Aligned_cols=116 Identities=12% Similarity=-0.014 Sum_probs=82.5
Q ss_pred EEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe----------C
Q 005147 574 LSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN----------F 638 (712)
Q Consensus 574 i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs----------~ 638 (712)
....|+++.+..+.. ++.|.++|..+. ..+.......... +.++| ++++++.++ .
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--------~v~~~I~vG~~P~-va~sp-DG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--------RVIGMIDGGFLPN-PVVAD-DGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--------EEEEEEEECSSCE-EEECT-TSSCEEEEEEEEEETTEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--------eEEEEEECCCCCc-EEECC-CCCEEEEEcccccccccCCC
Confidence 345688886666654 679999998762 1122222222224 99999 476665554 3
Q ss_pred CCcEEEEECCCCcEEEEeccCC-------CcEEEEEEecCCCCEEEEEEC--CCcEEEEeCCCCcEEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLASGSD--DGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~-------~~v~sv~fsp~~~~~l~sgs~--D~~v~lWd~~~~~~v~~~~ 700 (712)
++.|.+||..+++.+.++.-.. ..-+.+.|+| ||+++..+.. ++.|.++|+.+++.+.++-
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 6789999999999988875321 2456799998 8988777763 7899999999999888773
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.011 Score=61.31 Aligned_cols=148 Identities=12% Similarity=0.076 Sum_probs=90.2
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL--NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI 607 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~--~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~ 607 (712)
+.+..| ++ ..+.+.+.+.....+. |+..++... .....|.++.|+++++++++. +..|.+||..++..
T Consensus 51 ~egp~~-~~-~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~----- 121 (326)
T 2ghs_A 51 GEGPTF-DP-ASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVL----- 121 (326)
T ss_dssp EEEEEE-ET-TTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCE-----
T ss_pred CcCCeE-eC-CCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcE-----
Confidence 345566 22 1244444444444544 777665432 235679999999999877765 34599999865321
Q ss_pred ccceEEec---CCCCeEEEEEcCCCCCEEEEEeC------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-E
Q 005147 608 HYPVVEMA---SRSKLSSICWNSYIKSQIASSNF------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-A 677 (712)
Q Consensus 608 ~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~ 677 (712)
..+.... ....+++++++| +++++++... .+.|..+| +++. ..+..+....+.++|+| +++.+ +
T Consensus 122 -~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~-dg~~lyv 195 (326)
T 2ghs_A 122 -TLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSP-DGTTGYF 195 (326)
T ss_dssp -EEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECT-TSCEEEE
T ss_pred -EEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcC-CCCEEEE
Confidence 0111111 123588999999 5777665542 24455555 5543 33434445678999998 78755 5
Q ss_pred EEECCCcEEEEeCC--CC
Q 005147 678 SGSDDGSVKLWSIN--QA 693 (712)
Q Consensus 678 sgs~D~~v~lWd~~--~~ 693 (712)
+.+.++.|.+||+. ++
T Consensus 196 ~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EETTTCEEEEEEBCTTTC
T ss_pred EECCCCEEEEEEcccccC
Confidence 55567899999986 55
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=68.00 Aligned_cols=125 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred CCeeEEEEcCCCCEEEEEe--CCCcEEEEEcCCccccCcccccce---EEecCCCCeEEEEEcCCCCCEEEEEeC-----
Q 005147 569 NLVCSLSFDRDGELFAAAG--VNKKIKVFECDAIINENRDIHYPV---VEMASRSKLSSICWNSYIKSQIASSNF----- 638 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~--~d~~I~iwD~~~~~~~~~~~~~~~---~~~~~~~~v~~v~~~p~~~~~lasgs~----- 638 (712)
.....|+++++|++|++.. .++.++||.+..+. ....+. ....+-..+.+|++++. ++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~----~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG----LIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE----EEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC----eecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCC
Confidence 5788999999999999864 23436666664211 000010 01134567899999994 666665544
Q ss_pred CCcEEEEECCCCcEEEEeccC------CCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCCCCcEEEE
Q 005147 639 EGVVQVWDVSRSQVLTEMREH------ERRVWSIDFSSADPTLLASGS---DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H------~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~~~~~v~~ 698 (712)
++.|.+||+.+++.+.++..+ ...+..++++|.++..+++.+ .++.|.+||+.+++....
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 688999999999887776532 245789999974566677776 789999999998876543
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0048 Score=64.66 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=81.3
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 637 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--- 637 (712)
+|...+.+|.|+++++++++-.. +++|.+||+.++..... ...+.....+...+..++++|..+..+++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~-~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRV-IYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEE-EECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEE-EECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 45678999999999987776544 68999999875321000 0000000122345789999985455556655
Q ss_pred CCCcEEEEECCCCcEEEEeccCC-----------------------------CcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHE-----------------------------RRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~-----------------------------~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
.++.|.+||+.+++..+.+.+|. ..++.|+|+| +++.|..++.++. ++|
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHST-SMY 220 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCS-EEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCC-eEE
Confidence 68899999999888777665531 2368899998 8888888777663 444
Q ss_pred eC
Q 005147 689 SI 690 (712)
Q Consensus 689 d~ 690 (712)
.+
T Consensus 221 ~~ 222 (343)
T 2qe8_A 221 RI 222 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0038 Score=72.10 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=100.5
Q ss_pred cEEEEEcCCcEEEEEccCCc--ee---cCCCCeeEEEEcCCC---CEEEEEeCCCcEEEEEcCCccccCccccc--c-eE
Q 005147 544 LCKYLSFSKLRVKADLNQGD--LL---NSSNLVCSLSFDRDG---ELFAAAGVNKKIKVFECDAIINENRDIHY--P-VV 612 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~--~~---~h~~~V~~i~f~~~~---~~lat~~~d~~I~iwD~~~~~~~~~~~~~--~-~~ 612 (712)
.+...+.++++++|..+... .. ....++ -+....+| ..++.++.++.|.++|..++......... + ..
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~-l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI-LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE-EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcE-EEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 46777888899998876421 11 112222 22333467 68999999999999999875321100000 0 00
Q ss_pred Ee-cCCC------------------------CeEEEEEcCCCCCEEEEEeC-----------------------------
Q 005147 613 EM-ASRS------------------------KLSSICWNSYIKSQIASSNF----------------------------- 638 (712)
Q Consensus 613 ~~-~~~~------------------------~v~~v~~~p~~~~~lasgs~----------------------------- 638 (712)
.. .... .-..++++|. ..+++.+..
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ-TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT-TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC-CCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 00 0000 0125788885 555555432
Q ss_pred --------------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 639 --------------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 639 --------------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.|.|..||+.+++.+.++. +..++++..+.+ ++.+++.|+.|+.+++||.++|+.+.++-..
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 2789999999999999887 445566667775 6788888999999999999999999877543
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0023 Score=61.75 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=45.2
Q ss_pred CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCceeecCCCcEEE
Q 005147 65 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSF 123 (712)
Q Consensus 65 g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIll~~~~~vkl 123 (712)
..||.+.|+..+.++++.+++.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.|.+
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f 91 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTL 91 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEE
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceec
Confidence 578999998888889999999999999999876621 11113334568888888888877
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0081 Score=69.52 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=98.1
Q ss_pred cEEEEEcCCcEEEEEccCC--ceec--CCCCeeEEEEcCCCC---EEEEEeCCCcEEEEEcCCccccCcc------ccc-
Q 005147 544 LCKYLSFSKLRVKADLNQG--DLLN--SSNLVCSLSFDRDGE---LFAAAGVNKKIKVFECDAIINENRD------IHY- 609 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~--~~~~--h~~~V~~i~f~~~~~---~lat~~~d~~I~iwD~~~~~~~~~~------~~~- 609 (712)
.+..++.++++++|..+.. +... ....+.-.....+|. .++.++.+|.++++|..++...... ...
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 4778888899999887642 1111 122222222223554 7889999999999999875321000 000
Q ss_pred -------ceEE------e-cCCC-----------CeEEEEEcCCCCCEEEEEe---------------------------
Q 005147 610 -------PVVE------M-ASRS-----------KLSSICWNSYIKSQIASSN--------------------------- 637 (712)
Q Consensus 610 -------~~~~------~-~~~~-----------~v~~v~~~p~~~~~lasgs--------------------------- 637 (712)
++.. . .... ....++++|. ..+++.+.
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD-TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT-TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC-CCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0000 0 0000 1123688885 44555442
Q ss_pred ------------------CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 ------------------FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ------------------~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++|.|..||+.+++.+.++..+. +++.-.+.. .+.+++.|+.|+.+++||.++|+.+-++
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceE-CCCEEEEECCCCcEEEEECCCCccceee
Confidence 14789999999999999987654 344446664 6789999999999999999999999766
Q ss_pred ec
Q 005147 700 VD 701 (712)
Q Consensus 700 ~~ 701 (712)
-.
T Consensus 513 ~~ 514 (689)
T 1yiq_A 513 PA 514 (689)
T ss_dssp EC
T ss_pred eC
Confidence 43
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.013 Score=63.40 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=91.4
Q ss_pred CcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccceE
Q 005147 543 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 543 ~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
+.+.+.+..++++++.+..|. .+ .+.++||++.+.++. .++.|.++|..+..- ...+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-----v~~I~ 166 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-----IADIE 166 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-----EEEEE
T ss_pred CeEEEEECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE-----EEEEE
Confidence 677777888888887777653 34 799999999766664 467999999976211 11111
Q ss_pred Eec------CCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 613 EMA------SRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 613 ~~~------~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
.+ .......+.|+| ++++++.++. ++.|.+.|+.+++.+.++.-- .+ ....|.....+++.+.||+
T Consensus 167 -v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 167 -LPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp -ETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTSS
T ss_pred -CCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCC
Confidence 11 012345789999 5888888774 578999999999998887642 12 3334433456666777777
Q ss_pred EEEEeCCCCcEE
Q 005147 685 VKLWSINQAILL 696 (712)
Q Consensus 685 v~lWd~~~~~~v 696 (712)
+.+.++.+++..
T Consensus 241 ~~~V~~~~~~v~ 252 (426)
T 3c75_H 241 LARVDFADGETK 252 (426)
T ss_dssp EEEEECCTTCCE
T ss_pred EEEEECCCCcEE
Confidence 777777555443
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.016 Score=58.46 Aligned_cols=122 Identities=8% Similarity=0.119 Sum_probs=80.3
Q ss_pred CCeeEEEEcCCCCEEEEEeC--CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 569 NLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~~--d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
.....+.|++++.++++.|. ++.|.++|+.++.- .. ....+.....-.+++.. +.++++.-.++.|.++|
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-----~~-~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV-----EN-IHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE-----EE-EEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE-----EE-EEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEE
Confidence 34679999998877777664 68999999987321 11 11112222223456653 45555556789999999
Q ss_pred CCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 647 ~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
..+.+.+.++..-...-+.+ ++ |+..++.+..+++|.++|..+.+.+.++.-
T Consensus 93 ~~t~~v~~~i~~g~~~g~gl--t~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKDGWGL--AT-DGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TTTTEEEEEEECCSSSCCEE--EE-CSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CCCCcEEEEEECCCCCeEEE--EE-CCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 99999999886321222444 44 555444445789999999999888877653
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.00023 Score=75.94 Aligned_cols=109 Identities=9% Similarity=-0.018 Sum_probs=59.5
Q ss_pred CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q 005147 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE 658 (712)
Q Consensus 579 ~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~ 658 (712)
++..+++++.|+.|..||..++.... . . .. ..+.+..+.. ++..+++++.||.|..||..+|+.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W---~--~---~~-~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW---T--L---KE-DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE---E--E---EC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE---E--e---cC-CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 57789999999999999997643211 1 1 11 2333333444 366788889999999999999988877765
Q ss_pred CCCc-EE-EEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 659 HERR-VW-SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 659 H~~~-v~-sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+... +. +..+. ++..+++|+.|+.|..||..+|+.+-++
T Consensus 78 ~~~~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 78 TIPELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp CHHHHHTTCSCC-------CCCCEEEEEEEEECCC--------
T ss_pred cCccccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence 4221 11 01111 3457788889999999999999876544
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.00065 Score=70.23 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=55.7
Q ss_pred ceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-----------------------------------
Q 005147 56 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS----------------------------------- 100 (712)
Q Consensus 56 ~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs----------------------------------- 100 (712)
.|+++..+.|.+|.+... ..++..+...++.|++..|..||+
T Consensus 91 ~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 91 SFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp SCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred ceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 456655568988875331 236778888899999999988886
Q ss_pred -----------------------cCceeccCCCCceeecC--CCcEEEEeccccc
Q 005147 101 -----------------------QGIVVHNVRPSCFVMSS--FNHVSFIESASCS 130 (712)
Q Consensus 101 -----------------------~gIvHrDLkP~NIll~~--~~~vkl~dfg~~~ 130 (712)
..++|+|++|.||+++. .+.+.++||+.+.
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA 222 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence 24799999999999987 4567899999874
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.027 Score=57.59 Aligned_cols=116 Identities=9% Similarity=0.002 Sum_probs=80.4
Q ss_pred CCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 568 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 568 ~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
.....+..|+|+++ ++++...++.|..|+... . ..........+..+.|++ +++++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~--------~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T--------VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C--------EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C--------EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEEC
Confidence 45667899999998 677777889999998732 1 112223456688999999 588777766778899999
Q ss_pred CCCCcEEEEeccC-----CCcEEEEEEecCCCCEEEE----EEC-------------CCcEEEEeCCCCcEE
Q 005147 647 VSRSQVLTEMREH-----ERRVWSIDFSSADPTLLAS----GSD-------------DGSVKLWSINQAILL 696 (712)
Q Consensus 647 ~~~~~~~~~~~~H-----~~~v~sv~fsp~~~~~l~s----gs~-------------D~~v~lWd~~~~~~v 696 (712)
.. ++. ..+..+ ...++++.++| +|.+.+| |.. .+.|..||..+++..
T Consensus 114 ~~-g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~ 182 (305)
T 3dr2_A 114 AD-GQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ 182 (305)
T ss_dssp TT-SCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE
T ss_pred CC-CCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE
Confidence 86 553 233211 23567899997 8998887 332 256778887666543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.19 Score=49.56 Aligned_cols=159 Identities=12% Similarity=0.054 Sum_probs=101.8
Q ss_pred cCCCccc--eecccCCCCCCcEEEEEcCCc--EEE-EEccCCceecC---CCCe--eEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 526 EGYSEGR--RSGWINPFLEGLCKYLSFSKL--RVK-ADLNQGDLLNS---SNLV--CSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 526 gh~~~~~--~~~~~~~~~~~~~~~~~~~~~--~v~-~dl~~~~~~~h---~~~V--~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.|....+ ++.| .++.+-..+...+ .+. .|+.+++.... .... ..+++. .+.+++..-.++.+.+|
T Consensus 16 phd~~~ftqGL~~----~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFY----LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp ECCTTCCEEEEEE----ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEE
T ss_pred CCCCccccccEEE----ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEE
Confidence 4554444 5555 2356666655532 444 78888876642 2233 344444 23455555678999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--C---CcEEEEEEec
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--E---RRVWSIDFSS 670 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~---~~v~sv~fsp 670 (712)
|..+.. .+........=..+++. +..|+.++.++.|.++|..+.+.+.++.-. . ..++.+.|.
T Consensus 91 D~~tl~--------~~~ti~~~~~Gwglt~d---g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 91 DLATLT--------PRARFRYPGEGWALTSD---DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp ETTTTE--------EEEEEECSSCCCEEEEC---SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred ECCcCc--------EEEEEeCCCCceEEeeC---CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 997631 12222222233455543 556666677999999999999888877532 2 356778876
Q ss_pred CCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 671 ADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 671 ~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
++.+.|..-.+..|.+-|.++|+.+..+-..
T Consensus 159 -~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred -CCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 6777766656889999999999998877644
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.42 E-value=0.023 Score=56.73 Aligned_cols=118 Identities=8% Similarity=0.192 Sum_probs=78.8
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCcccccceEEecCCCCeEE--EEEcCCCCCEEEEEeCCCcEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLSS--ICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~--v~~~p~~~~~lasgs~Dg~V~ 643 (712)
......+.|+ ++.++.++|.++ .|+++|+.++.- .....-...... ++.. ...++...-.++.+.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--------~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--------LQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGF 110 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEE
T ss_pred CcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--------EEEEecCCccceeEEEEe--CCEEEEEEeeCCEEE
Confidence 4445789999 778888888876 899999987421 111111223333 4443 234444455688999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||..+.+.+.++..- ..-|.+++ ++..|+.+..+++|.++|..+.+.+.++-
T Consensus 111 v~D~~t~~~~~ti~~~-~eG~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYD-GEGWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEETTTCCEEEEEECS-SCCCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEECccCcEEEEEECC-CCceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 9999999999998753 33355554 44544444457889999999988887754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.025 Score=63.07 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=89.8
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCC---------------c--------------
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK---------------K-------------- 591 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~---------------~-------------- 591 (712)
.++.+.+.+.++.++.|.+.-+. .-..+.++|+|.++++++.+. .
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred cCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 56678888888999999887532 123466889998877777543 2
Q ss_pred ---------EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE-EEEEeCCCcEEEEECCCCc----------
Q 005147 592 ---------IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNFEGVVQVWDVSRSQ---------- 651 (712)
Q Consensus 592 ---------I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~-lasgs~Dg~V~lwD~~~~~---------- 651 (712)
|.|.|.++.. ....+....-.....++.++|+ +.+ ++++..+.+|.++|+.+.+
T Consensus 247 ~Gk~~~i~~V~VID~~~~~-----~~~~~~~Ipvg~~PhGv~~sPD-Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEA-----SSLFTRYIPIANNPHGCNMAPD-KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HTCSEEETTEEEEECSGGG-----CCSSEEEEEEESSCCCEEECTT-SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred CCCeeEECcEEEEeCcccC-----CceeEEEEecCCCceEEEEcCC-CCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 4444443210 0000112222234568999995 665 5555578999999999653
Q ss_pred --EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 652 --VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 652 --~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.+.+.. -....+.++|+| +|...++.-.|+.|.+||+..
T Consensus 321 ~~v~~~v~-vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 321 SAVVAEPE-LGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGEEECCB-CCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEEcC-CCCCcceEEECC-CCeEEEEEecCCcEEEEEhhH
Confidence 344443 345678899998 885555556799999999976
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.027 Score=60.78 Aligned_cols=154 Identities=12% Similarity=0.138 Sum_probs=96.0
Q ss_pred CcEEEEEcCC-----cEEEEEcc---CCceecCCCC-ee----EEEEc--CCCCE-EEEEeCCCcEEEEEcCCccccCcc
Q 005147 543 GLCKYLSFSK-----LRVKADLN---QGDLLNSSNL-VC----SLSFD--RDGEL-FAAAGVNKKIKVFECDAIINENRD 606 (712)
Q Consensus 543 ~~~~~~~~~~-----~~v~~dl~---~~~~~~h~~~-V~----~i~f~--~~~~~-lat~~~d~~I~iwD~~~~~~~~~~ 606 (712)
..+.+.+.+. ++|+..+. .++-.+|.++ .| +..++ ++.++ +++|..+.+|.|+|+.+.... ..
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~-p~ 121 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE-PK 121 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS-CE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCC-ce
Confidence 3445555554 56664443 3445566554 11 12345 66775 555667899999999652111 11
Q ss_pred cccceEE---e--c-CCCCeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCCC---cEEEEEEecC
Q 005147 607 IHYPVVE---M--A-SRSKLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHER---RVWSIDFSSA 671 (712)
Q Consensus 607 ~~~~~~~---~--~-~~~~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~~---~v~sv~fsp~ 671 (712)
.+. +.+ . . -.+....+...| ++ +++++..+ |.|.+.|..+.+.+.++..-.. -.+.+-|+|
T Consensus 122 ~~k-~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p- 197 (462)
T 2ece_A 122 IIK-VIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL- 197 (462)
T ss_dssp EEE-EECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET-
T ss_pred eee-eechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC-
Confidence 111 110 0 0 112344567788 46 77777666 7899999999999999873322 245688898
Q ss_pred CCCEEEEEE-------------------CCCcEEEEeCCCCcEEEEEec
Q 005147 672 DPTLLASGS-------------------DDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 672 ~~~~l~sgs-------------------~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+++.++|.. .+.+|.+||+.+++.+.++-.
T Consensus 198 ~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 198 PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 888888874 378999999999877766543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.048 Score=54.54 Aligned_cols=119 Identities=11% Similarity=0.147 Sum_probs=82.9
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
......+.|+ ++.++.+.|.++.|+++|+.++.- ...+ .....---.+++.. +.++...-.++.+.+||.
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv-----~~~~--l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP-----VWME--RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC-----SEEE--ECTTCCEEEEEECS--SCEEEEESSSCEEEEEET
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE-----EeEE--CCCCcceeEEEEeC--CEEEEEEccCCEEEEEEC
Confidence 4556789998 467888999999999999987421 1111 22211112355543 456666667899999999
Q ss_pred CCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 648 ~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+.+.+.++.. ...-|.+++ ++..|+.+..+++|.++|..+.+.+.++-
T Consensus 124 ~Tl~~~~ti~~-~~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 124 MPPQRERTTRY-SGEGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp TTTEEEEEEEC-SSCCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CcCcEEEEEeC-CCceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 99999999875 334466665 45555555568999999999988887764
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.17 Score=50.90 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=96.0
Q ss_pred eecccCCCCCCcEEEEEcC--CcEEE-EEccCCceecC-----CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 533 RSGWINPFLEGLCKYLSFS--KLRVK-ADLNQGDLLNS-----SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~--~~~v~-~dl~~~~~~~h-----~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
++.| + .++.+.+++.. ...+. .|+.+++.... ......++++. +.+.++.-.++.|.++|..+..
T Consensus 25 Gl~~-~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~--- 97 (266)
T 2iwa_A 25 GLVY-A--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLS--- 97 (266)
T ss_dssp EEEE-C--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTE---
T ss_pred cEEE-e--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCc---
Confidence 5666 2 33565555532 33444 78877775532 22233555552 3455555578999999997621
Q ss_pred cccccceEEecCC-CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-----CCcEEEEEEecCCCCEEEE
Q 005147 605 RDIHYPVVEMASR-SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-----ERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 605 ~~~~~~~~~~~~~-~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-----~~~v~sv~fsp~~~~~l~s 678 (712)
.+...... ..-..++ + ++..++.+..++.|.++|..+.+.+.++.-- -..++.+.|. ++.+.+.
T Consensus 98 -----v~~~i~~g~~~g~glt--~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn 167 (266)
T 2iwa_A 98 -----NIKNFTHQMKDGWGLA--T-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWAN 167 (266)
T ss_dssp -----EEEEEECCSSSCCEEE--E-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred -----EEEEEECCCCCeEEEE--E-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEe
Confidence 11112111 1223344 4 3555556667899999999999888777521 1247888988 6777776
Q ss_pred EECCCcEEEEeCCCCcEEEEEec
Q 005147 679 GSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
...++.|.+-|..+++.+..+-.
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEEC
T ss_pred cCCCCeEEEEECCCCcEEEEEEC
Confidence 66789999999999999887754
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.016 Score=62.57 Aligned_cols=101 Identities=11% Similarity=-0.058 Sum_probs=72.3
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe----------CCCcEEEEECCCCcEEEEeccC
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN----------FEGVVQVWDVSRSQVLTEMREH 659 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs----------~Dg~V~lwD~~~~~~~~~~~~H 659 (712)
+.|.++|..+.. .+........- .+.++|+ ++.++.++ .++.|.++|..+++.+.++.--
T Consensus 99 ~~VsVID~~t~~--------vv~~I~vG~~P-gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGR--------ILGMTDGGFLP-HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETTTTE--------EEEEEEECSSC-EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCE--------EEEEEECCCCC-ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 689999987621 11222222223 8999995 66666554 4678999999999998887532
Q ss_pred -------CCcEEEEEEecCCCCEEEEEEC--CCcEEEEeCCCCcEEEEEec
Q 005147 660 -------ERRVWSIDFSSADPTLLASGSD--DGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 660 -------~~~v~sv~fsp~~~~~l~sgs~--D~~v~lWd~~~~~~v~~~~~ 701 (712)
......+.|+| |++++..+.. ++.|.+.|+.+++.+.++--
T Consensus 169 g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp TCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 12345789998 8988888764 68999999999998877643
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.19 Score=52.73 Aligned_cols=147 Identities=8% Similarity=0.005 Sum_probs=91.4
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCC--CCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSS--NLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~--~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
+..++.+...+..+++++|........+.. ..+.++.-.| .+..+..++.++.|..+|..++.... ..
T Consensus 194 g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w--------~~ 265 (376)
T 3q7m_A 194 GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW--------KR 265 (376)
T ss_dssp CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE--------EE
T ss_pred EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe--------ec
Confidence 455677777777788888876543211100 0000011111 24677777889999999997642110 11
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
. .....++... +..++.++.+|.|..+|..+++.+...... ...+.+.... +..++.++.+|.|.++|..+|
T Consensus 266 ~-~~~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 266 E-LGSVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp C-CCCEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTC
T ss_pred c-CCCCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCC
Confidence 1 1223444443 567888888999999999999998877632 2233333333 467888889999999999999
Q ss_pred cEEEEEe
Q 005147 694 ILLLHLV 700 (712)
Q Consensus 694 ~~v~~~~ 700 (712)
+.+-..-
T Consensus 339 ~~~~~~~ 345 (376)
T 3q7m_A 339 RFVAQQK 345 (376)
T ss_dssp CEEEEEE
T ss_pred cEEEEEe
Confidence 9876554
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.039 Score=63.66 Aligned_cols=110 Identities=13% Similarity=0.018 Sum_probs=70.2
Q ss_pred CCcEEEEEcCCcEEEEEccCCcee---------------------------cCCCCeeEEEEcCCCCEEEEEeCCC----
Q 005147 542 EGLCKYLSFSKLRVKADLNQGDLL---------------------------NSSNLVCSLSFDRDGELFAAAGVNK---- 590 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~~dl~~~~~~---------------------------~h~~~V~~i~f~~~~~~lat~~~d~---- 590 (712)
++.+..++..+++++|......-. +.......++++|++.++..+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 577788888888888877642211 1122234688999988888877654
Q ss_pred ---------------cEEEEEcCCccccCcccccceEEecC-------CCCeEEEEEcCCCC---CEEEEEeCCCcEEEE
Q 005147 591 ---------------KIKVFECDAIINENRDIHYPVVEMAS-------RSKLSSICWNSYIK---SQIASSNFEGVVQVW 645 (712)
Q Consensus 591 ---------------~I~iwD~~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~p~~~---~~lasgs~Dg~V~lw 645 (712)
.|..+|..++... ++ .....| ......+.... ++ ..++.++.+|.|.++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~---W~--~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~l 342 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYK---WH--YQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVL 342 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEE---EE--EESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEE---EE--EecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEE
Confidence 4888898774311 11 111111 11222233333 35 689999999999999
Q ss_pred ECCCCcEEEEec
Q 005147 646 DVSRSQVLTEMR 657 (712)
Q Consensus 646 D~~~~~~~~~~~ 657 (712)
|..+|+.+..+.
T Consensus 343 D~~tG~~l~~~~ 354 (677)
T 1kb0_A 343 DRTNGKFISAKN 354 (677)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCCEecccc
Confidence 999999987765
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.14 Score=51.17 Aligned_cols=147 Identities=6% Similarity=-0.010 Sum_probs=99.5
Q ss_pred CCcEEEEEcCCcEEE-EEccCCceecC--CCCe--eEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 542 EGLCKYLSFSKLRVK-ADLNQGDLLNS--SNLV--CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~-~dl~~~~~~~h--~~~V--~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
++.+....+..+++. .|+++++.... .... ..+++.. +.++++.-.++.+.+||..+.. .+.....
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~--------~~~ti~~ 134 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQ--------RERTTRY 134 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTE--------EEEEEEC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCc--------EEEEEeC
Confidence 467777777777765 78888775542 1222 3455543 3455556678999999997632 1222222
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--CC---CcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE--HE---RRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~--H~---~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
...-..+++. +..|+.++.++.|.++|..+.+.+.++.- +. ..++.+.|. +|.+.|..-.+..|.+-|.+
T Consensus 135 ~~eGwGLt~D---g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 135 SGEGWGLCYW---NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp SSCCCCEEEE---TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEECTT
T ss_pred CCceeEEecC---CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEeCC
Confidence 2222455543 56777777899999999999998887753 22 245788887 78777666678899999999
Q ss_pred CCcEEEEEece
Q 005147 692 QAILLLHLVDV 702 (712)
Q Consensus 692 ~~~~v~~~~~~ 702 (712)
+|+.+..+-..
T Consensus 210 TG~V~~~Idl~ 220 (268)
T 3nok_A 210 TGTVVGVIDAS 220 (268)
T ss_dssp TCBEEEEEECH
T ss_pred CCcEEEEEECC
Confidence 99998877643
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.12 Score=51.47 Aligned_cols=145 Identities=9% Similarity=-0.005 Sum_probs=93.9
Q ss_pred CCcEEEEEcCCc--EEE-EEccCCceecC---CCCe--eEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceE
Q 005147 542 EGLCKYLSFSKL--RVK-ADLNQGDLLNS---SNLV--CSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 542 ~~~~~~~~~~~~--~v~-~dl~~~~~~~h---~~~V--~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
++.+..+....+ .+. .|+++++.... .... ..+++. ++ +.++.-.++.+.+||..+.. .+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~--------~~~ 121 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR--------QVR 121 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC--------EEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc--------EEE
Confidence 566666665544 444 78888876542 2233 334543 44 44444568999999997631 122
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--C---CcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--E---RRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~---~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
.......=..+++ ++..|+.++.++.|.++|..+.+.+.++.-. . ..++.+.|. +|.+.|..-.+..|.+
T Consensus 122 ti~~~~eG~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 122 SFNYDGEGWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEECSSCCCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEE
T ss_pred EEECCCCceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEE
Confidence 2222222234443 3566666667889999999999988876532 2 345678886 6777776667889999
Q ss_pred EeCCCCcEEEEEec
Q 005147 688 WSINQAILLLHLVD 701 (712)
Q Consensus 688 Wd~~~~~~v~~~~~ 701 (712)
.|.++|+.+..+-.
T Consensus 197 IDp~tG~V~~~Id~ 210 (262)
T 3nol_A 197 IDPETGKVTGIIDL 210 (262)
T ss_dssp ECTTTCBEEEEEEC
T ss_pred EECCCCcEEEEEEC
Confidence 99999999887754
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.091 Score=51.91 Aligned_cols=118 Identities=12% Similarity=0.106 Sum_probs=79.5
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCcccccceEEecCCCCeE--EEEEcCCCCCEEEEEeCCCcEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLS--SICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
......+.|+. +.++.+.|.++ .|+.+|+.++.- .....-..... .++.. .+.++...-.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv--------~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI--------LQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGF 88 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE--------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE--------EEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEE
Confidence 46677999986 67778878754 899999987321 11111112222 34443 245555566789999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||..+.+.+.++..- ..-|.++.. .+.+++| ..+++|.++|..+.+.+.++-
T Consensus 89 v~D~~tl~~~~ti~~~-~~Gwglt~d--g~~L~vS-dgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 89 VYDLATLTPRARFRYP-GEGWALTSD--DSHLYMS-DGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEETTTTEEEEEEECS-SCCCEEEEC--SSCEEEE-CSSSEEEEECTTTCCEEEEEE
T ss_pred EEECCcCcEEEEEeCC-CCceEEeeC--CCEEEEE-CCCCeEEEEeCCCCeEEEEEE
Confidence 9999999999998753 334666643 3445555 458899999999988877664
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.076 Score=59.83 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=47.7
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.+|.|..||+.+++.+.++... .++++..+.. .+.+++.++.|+.|.+||.++|+.+-++-.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 3578999999999998888643 3344444442 4567777999999999999999999776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 712 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-17 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-07 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-04 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 0.003 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-15 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-06 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.002 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-12 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-12 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-12 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-11 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-10 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 5e-06 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-05 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-11 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 4e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 0.003 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 8e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-04 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-10 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.001 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.002 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-10 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-10 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-05 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 7e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 0.002 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-09 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.002 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-09 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-04 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-09 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-09 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-09 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 5e-09 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 7e-09 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-05 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 9e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-08 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-08 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-04 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 6e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 0.003 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-08 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 8e-08 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-07 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-05 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-07 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-07 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-07 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-07 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 6e-07 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-05 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-06 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-06 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-05 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-05 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 9e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.003 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-05 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-05 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-05 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 5e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.002 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 6e-05 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-05 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 1e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.001 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 0.001 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 0.004 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.2 bits (196), Expect = 7e-17
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 558 DLNQGDLLNS----SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
D+ +G + + + ++ F +G FA + ++F+
Sbjct: 212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR-----ADQELMTYSH 266
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
++S+ + S + + + VWD ++ + H+ RV + + D
Sbjct: 267 DNIICGITSVSF-SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DG 324
Query: 674 TLLASGSDDGSVKLWS 689
+A+GS D +K+W+
Sbjct: 325 MAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 49.7 bits (117), Expect = 7e-07
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
+ S + ++WDV HE + +I F + A+GSDD
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDA 248
Query: 684 SVKLW 688
+ +L+
Sbjct: 249 TCRLF 253
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.1 bits (92), Expect = 7e-04
Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 618 SKLSSICWNSYIKSQIASSNFEGVVQV--WDVSRSQVLTEMREHERRVWSIDFSSADPTL 675
S +++IC+ + A+ + + ++ + + + S+ FS L
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRL 284
Query: 676 LASGSDDGSVKLWSINQAILLLHL 699
L +G DD + +W +A L
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVL 308
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.2 bits (87), Expect = 0.003
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 630 KSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
K+ ++ + + V R Q+ T +R H +++++ + + D LL S S DG + +
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLII 81
Query: 688 WSINQAILLLHL 699
W + +
Sbjct: 82 WDSYTTNKVHAI 93
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.0 bits (185), Expect = 3e-15
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECD-----AIINENRDIHYPVVEMASRSKLSSICW 625
V S+ F RDG+ + +++ +K++ + V + + + S+
Sbjct: 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316
Query: 626 NSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS-----SADPTLLASGS 680
I S + + V WD L ++ H V S+ + + + A+GS
Sbjct: 317 TQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 681 DDGSVKLWSINQ 692
D ++W +
Sbjct: 376 GDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 14/136 (10%)
Query: 576 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635
DG+ AA +++ ++V++ + R + + S+ + + + S
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVS 271
Query: 636 SNFEGVVQVWDVSRSQVLTEM------------REHERRVWSIDFSSADPTLLASGSDDG 683
+ + V++W++ + ++ H+ V S+ + + + SGS D
Sbjct: 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDR 330
Query: 684 SVKLWSINQAILLLHL 699
V W LL L
Sbjct: 331 GVLFWDKKSGNPLLML 346
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.3 bits (95), Expect = 3e-04
Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLA 677
+ +S +++ + + L + +H V + FS+ D LA
Sbjct: 20 LLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSN-DGEYLA 78
Query: 678 SGSDDGSVKLWSINQAILLLHLVD 701
+G + + +++ ++ L+ L D
Sbjct: 79 TGCNK-TTQVYRVSDGSLVARLSD 101
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.6 bits (88), Expect = 0.002
Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 23/180 (12%)
Query: 495 PLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554
LV ++Q ++ + P + + S + + + + + NP L
Sbjct: 2 YLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILY-NP------------ALP 48
Query: 555 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINEN 604
+ D+ L+ +++VC + F DGE A + D+ N++
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKD 108
Query: 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW 664
+ +S + S+C++ K + + +R V+ +
Sbjct: 109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYS 168
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.2 bits (161), Expect = 1e-12
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 232 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 289
+ T +Y SPE++ + SDI+ LG LL+EL P T + +R
Sbjct: 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
+ ++ E +L+ + RP + E+L++ +
Sbjct: 234 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 2e-12
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T + +PE + D+Y G+ + E+ P+S + + + V P
Sbjct: 176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 234
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
E + R + +LL F
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.2 bits (156), Expect = 8e-12
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T ++ +PE + DI+ LG++ E+ P+ + Q
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL--NEPRDSM 332
K F L + R ELLQ +FL +P S+
Sbjct: 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.4 bits (155), Expect = 1e-11
Identities = 22/129 (17%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 560 NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619
+ ++ + + + G + +K IK+++ + + + +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV----STGMCLM---TLVGHDNW 249
Query: 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679
+ + ++S I S + ++VWD + + + HE V S+DF + +G
Sbjct: 250 VRGVLFHSG-GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK-TAPYVVTG 307
Query: 680 SDDGSVKLW 688
S D +VK+W
Sbjct: 308 SVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.4 bits (142), Expect = 4e-10
Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 572 CSLSFDRDGELFAAAGVNKKIKVF-----ECDAIINENRDIHYPVVEMASRSKLSSICWN 626
+ ++DG L A+ ++ ++V+ EC A + E+R + + S S
Sbjct: 147 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 206
Query: 627 SYIKSQ-------IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679
+ + S + + +++WDVS L + H+ V + F S + S
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSC 265
Query: 680 SDDGSVKLWSIN 691
+DD ++++W
Sbjct: 266 ADDKTLRVWDYK 277
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.7 bits (109), Expect = 5e-06
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
W + + H V + F +++ S S+D ++K+W L
Sbjct: 3 WIPRPPEKYA-LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTL 55
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.1 bits (105), Expect = 2e-05
Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 35/163 (21%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFE---------------------------------- 596
V + F + +A + IKV++
Sbjct: 20 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 79
Query: 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM 656
I + + M S I S++ + +++W+V +
Sbjct: 80 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
H V + + D TL+AS S+D +V++W + L
Sbjct: 140 TGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAEL 181
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 63.9 bits (155), Expect = 2e-11
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL 291
+A+PE G PV +D++ +GVL + L PF GE T+ +++ +
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSA 248
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 348
++ F LL +P+ R + + L+ +L + + +I +
Sbjct: 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 306
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.2 bits (153), Expect = 3e-11
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--- 286
T +Y +PE L + D++ LGV+++ L C PF ++ R+
Sbjct: 174 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMG 232
Query: 287 ---LPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE----PRDSMEEREAA 338
P + +E LL EP+ R + E + ++ + P+ +
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 292
Query: 339 IELREQID--EEELLLEFLLLVQQRKQESAKKLQD 371
E +E+ + +EE+ + +Q KK++D
Sbjct: 293 KEDKERWEDVKEEMTSALATMRVDYEQIKIKKIED 327
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 4e-11
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 235 TNWYASPEELAGAPVSC-ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T Y +PE L D++ G++L + P+ + + S + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
K + +L PS R + ++ + + N+P
Sbjct: 228 PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 4e-11
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 5/155 (3%)
Query: 221 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR 277
++ LL Y +PE VS A+D++ LG L++ L PF +
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 278 TMSSLRHRVLPPQLLLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ + + K EA F LL E R E LQ +L + + + +
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271
Query: 336 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQ 370
+ + + ++V + ++
Sbjct: 272 VIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIR 306
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (149), Expect = 5e-11
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y PE + G D++ LGVL +E PF + R P
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 226
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 327
+ + A LL PS RP + E+L+ ++
Sbjct: 227 V---TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (87), Expect = 0.003
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 44 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103
L G + + + G + + L K + D ++ + HS+ +
Sbjct: 71 LYGYFHDATRVYLILEYAPLGT--VYRELQKLSK-FDEQRTATYITELANALSYCHSKRV 127
Query: 104 VVHNVRPSCFVMSSFNHV 121
+ +++P ++ S +
Sbjct: 128 IHRDIKPENLLLGSAGEL 145
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.6 bits (149), Expect = 8e-11
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPP 289
T Y +PE LA P S A D + +GV+ + L C PF E + +
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDS 230
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAI--ELREQID 346
A F L+ +P R + LQ ++ + ++ ++++
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFA 290
Query: 347 EEEL 350
+ +
Sbjct: 291 KSKW 294
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.4 bits (147), Expect = 1e-10
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDVS--RSQVLTEMREHERRVWSIDFSSADPTLLAS 678
S WN ++QIA V +++ S + + E++EH +V +D++ D + +
Sbjct: 11 SCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVT 68
Query: 679 GSDDGSVKLWSINQ 692
D + +W++
Sbjct: 69 CGTDRNAYVWTLKG 82
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.4 bits (95), Expect = 3e-04
Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 13/120 (10%)
Query: 575 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634
+F + L AA G + +F D + R + + ++
Sbjct: 250 TFITESSLVAA-GHDCFPVLF--------TYDSAAGKLSFGGRLDVPKQSSQRGLTARER 300
Query: 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS---SADPTLLASGSDDGSVKLWSIN 691
N + + + + H+ V I A + + DG + +W +
Sbjct: 301 FQNLDKKASSEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.2 bits (145), Expect = 2e-10
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP 289
T + +PE + P+ +D++ +GV+ + L PF G+ K T++++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAVNYEFED 237
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 340
+ A F LL +P R + + LQ ++ +P+D+ + +A
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSSAWS 288
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 2e-10
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 7/127 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
LV Q K+ D + ++++ +ASPE + + S SD++
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTG----TKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVL++E+F + + + + L P RP
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247
Query: 315 KMGELLQ 321
LL+
Sbjct: 248 AFSRLLR 254
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.4 bits (142), Expect = 4e-10
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681
S+ + +Y S+ + ++ W + + + V S D S D + +GS
Sbjct: 270 SLKF-AYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISV-DDKYIVTGSG 326
Query: 682 DGSVKLWSI 690
D ++ +
Sbjct: 327 DKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (89), Expect = 0.001
Identities = 8/44 (18%), Positives = 13/44 (29%), Gaps = 1/44 (2%)
Query: 656 MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
+ HE V S+ F+ S D + W +
Sbjct: 261 LHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS 303
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 0.002
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSFETKRTTV 711
H V ++ S+ + +G G VK+W I+ + + + +
Sbjct: 49 NHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYI 100
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 58.6 bits (141), Expect = 5e-10
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +PP
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 236
Query: 292 LLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
+ + + L L P R + ++++ +
Sbjct: 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.7 bits (140), Expect = 5e-10
Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 22/119 (18%)
Query: 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638
L + + I+++ DI + + +I S +
Sbjct: 187 RDRLVVSGSSDNTIRLW----------DIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 236
Query: 639 EGVVQVWDVSRS---------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688
+G ++VWD+ + L + EH RV+ + F D + S S D ++ +W
Sbjct: 237 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
Q + E + V+ + + D + SG D ++K+W N L
Sbjct: 6 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRIL 51
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (91), Expect = 7e-04
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681
I Y + S + + +++WD+ L + HE V I F D + SG+
Sbjct: 180 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAY 236
Query: 682 DGSVKLWSIN 691
DG +K+W +
Sbjct: 237 DGKIKVWDLV 246
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (87), Expect = 0.002
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680
+++ + I S++ + ++VW+ S + + + H+R + + + L+ SGS
Sbjct: 139 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGS 195
Query: 681 DDGSVKLWSINQ 692
D +++LW I
Sbjct: 196 SDNTIRLWDIEC 207
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 7e-10
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 235 TNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T Y+ PE + ++ ++ LG+LL+++ C PF EE R R RV +
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-SSE 230
Query: 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 336
W L PS RP E+ ++ + E E
Sbjct: 231 C-------QHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 8e-10
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 232 LMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 285
L + + +PE + P S SD+Y G++L+EL P+S + + + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 286 VLPPQLLL---KFPKEA-SFCLWLLHPEPSGRPKMGELLQS 322
L P L PK L + RP ++L S
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQ 290
T +A+PE + PV +D++ +GVL + L PF+ ++ + R
Sbjct: 191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED 250
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
EA F LL EP R + + L+ +L ++ R
Sbjct: 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 1e-09
Identities = 20/140 (14%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV K+ D ++ ++ + + + +PE ++ + ASD++
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG--KIPIRWTAPEAISYRKFTSASDVWS 198
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
G++++E+ M ++ P + + E + RP
Sbjct: 199 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 258
Query: 315 KMGELLQS-EFLNEPRDSME 333
K +++ + L DS++
Sbjct: 259 KFADIVSILDKLIRAPDSLK 278
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (137), Expect = 1e-09
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289
+ +PE L S SD++ G+LL+E++ + +
Sbjct: 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220
Query: 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
P H + + RP +L +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 2e-09
Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 11/140 (7%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV KI D + + + + + +PE + + SD++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 313
G+LL E+ G + +L R P+E P R
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
Query: 314 PKMGELLQSEFLNEPRDSME 333
P L L + + E
Sbjct: 255 PTFDYLRS--VLEDFFTATE 272
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 17/121 (14%)
Query: 237 WYASPEELAG-----APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
++ +PE + P +D++ LG+ L E+ P + +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 289 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 347
++ F L R +LLQ F+ + +RE I E
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK--------PIRELIAE 286
Query: 348 E 348
Sbjct: 287 A 287
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (90), Expect = 0.002
Identities = 4/55 (7%), Positives = 23/55 (41%)
Query: 67 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 121
++ + + +R + + + +Q ++ + H I+ +++ + + +
Sbjct: 95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 235 TNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
T ++ +PE + D++ LG+ EL P + + P
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESP 232
Query: 289 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 347
+ + +F L P RP LL+ F+ R + ++ + E
Sbjct: 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292
Query: 348 EELL 351
+ L
Sbjct: 293 LDNL 296
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.2 bits (136), Expect = 2e-09
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV-SRSQVLTEMREHERR 662
Y + LS+I + + S + E ++++ S V + + +
Sbjct: 268 WDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQ 326
Query: 663 VWSIDFSSADPTLLASGSDDGSVKLWSIN 691
+WS++F TL+A+ DG L ++
Sbjct: 327 IWSVNFK--GKTLVAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 11/66 (16%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675
S ++ + + + + + + +++V+D + L ++ H+ VW++ ++ +
Sbjct: 12 MTSVITCLQFED---NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA--HGGI 66
Query: 676 LASGSD 681
L SGS
Sbjct: 67 LVSGST 72
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.3 bits (92), Expect = 6e-04
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 654 TEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
T +R H V + + + +G+DD ++++ LL L
Sbjct: 6 TTLRGHMTSVITC--LQFEDNYVITGADDKMIRVYDSINKKFLLQL 49
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 4e-09
Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + SD++ G+LL EL G + + P
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 235
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ P+ EP RP L FL + S E +
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQ 278
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 4e-09
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y +PE L G + + D + GVLL+E+ PF G+++ S+R P
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH-GQDEEELFHSIRMD--NPFY 222
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKM-GELLQSEFLNE-PRDSMEEREAAIELREQIDEE 348
KEA + L EP R + G++ Q E + +E +E R ++
Sbjct: 223 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 282
Query: 349 ELLLEF 354
F
Sbjct: 283 FDCSNF 288
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 5e-09
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 4/127 (3%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+++ K+ D + + +K+ + + + E L + SD++
Sbjct: 161 CMLDEKFTVKVADFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVLL+EL P L Q L HP+ RP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 279
Query: 315 KMGELLQ 321
EL+
Sbjct: 280 SFSELVS 286
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 5e-09
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE + S SD++ GVL++E F P+ K ++++ +
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR--GMKGSEVTAMLEKGERMG 230
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
P+E + RP +
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.4 bits (131), Expect = 7e-09
Identities = 11/70 (15%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGS 680
+ +A+ + + + ++ V R +++ + H+ V ++ + P+ L S
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE--TPSTLVSSG 276
Query: 681 DDGSVKLWSI 690
D +K W++
Sbjct: 277 ADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.2 bits (102), Expect = 3e-05
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
+VL + H + + ++ + L SGS DG + WS +
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSS 39
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 8e-09
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
++ PE L + S SDI+ GVL++E++ P+ + T + + +
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYR 222
Query: 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
L K + H + RP LL
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLS 253
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 54.7 bits (131), Expect = 9e-09
Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+L++ K+ D + + +K + D++
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPS 311
GV+++ L PF ++ + + + L +P
Sbjct: 201 TGVIMYTLLAGSPPF-WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 259
Query: 312 GRPKMGELLQSEFLNE 327
R E L F +
Sbjct: 260 KRYTAEEALAHPFFQQ 275
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 55.2 bits (132), Expect = 9e-09
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 16/151 (10%)
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
D+ + + G V +++ K D R + + + L T YA
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH-------QHIPYRENKNLTGTARYA 180
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFC--------PFSTGEEKTRTMSSLRHRVLPPQL 291
S G S D+ LG +L +T +K +S + L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
+P E ++ + +P L Q
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV K+ D ++ ++ P + + +PE + + ASD++
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
Query: 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313
G++++E+ P+ ++++ P + L + + R
Sbjct: 219 YGIVMWEVMSYGERPYW-DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 277
Query: 314 PKMGELLQS--EFLNEPRDSME 333
PK G+++ + + + P +S++
Sbjct: 278 PKFGQIVNTLDKMIRNP-NSLK 298
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 2e-08
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE L S ASD + GV L+E+F P+ G ++ + +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLP 235
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 327
P++ + + +P RP L +FL E
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR--DFLLE 271
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 54.5 bits (129), Expect = 2e-08
Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 6/125 (4%)
Query: 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626
A + I + D + +S S +
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV-PVH 284
Query: 627 SYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686
+ + +GV+ +DV +V + + + S AD + DDG +
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRKVTE----VKNNLTDLRLS-ADRKTVMVRKDDGKIY 339
Query: 687 LWSIN 691
+ +
Sbjct: 340 TFPLE 344
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.2 bits (128), Expect = 2e-08
Identities = 10/69 (14%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSD 681
+ + A+ + ++VWDV+ S+ + + + + + + + S S
Sbjct: 257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 316
Query: 682 DGSVKLWSI 690
DG++ + +
Sbjct: 317 DGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.2 bits (97), Expect = 2e-04
Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWS 665
P R+ + + ++ + V+ D S+ V+ V +
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTT 68
Query: 666 IDFS-SADPTLLASGSDDGSVKLWSIN 691
+ FS L SG + G V +W
Sbjct: 69 VKFSPIKGSQYLCSGDESGKVIVWGWT 95
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 4e-08
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE L + SD++ G+LL+E+F P+ G L
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP-GIPVDANFYKLIQNGFKMD 287
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
+E + RP L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 4e-08
Identities = 18/133 (13%), Positives = 48/133 (36%), Gaps = 19/133 (14%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627
+L + + + + +K+++ + S++
Sbjct: 217 QSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ-------SAVTCLQ 267
Query: 628 YIKSQIASSNFEGVVQVWDVSRSQVL-----TEMREHERRVWSIDFSSADPTLLASGSDD 682
+ K+ + +S+ +G V++WD+ + + E VW I S+ + A GS +
Sbjct: 268 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRN 326
Query: 683 GS----VKLWSIN 691
G+ + + +
Sbjct: 327 GTEETKLLVLDFD 339
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 6e-07
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638
DG + ++ I+V+ D+ S + + S N
Sbjct: 186 DGIHVVSGSLDTSIRVW----------DVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 235
Query: 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698
+ V++WD+ Q L ++ + ++ + + + SDDG+VKLW + + +
Sbjct: 236 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRN 295
Query: 699 LVDVSFETKRTTV 711
LV + V
Sbjct: 296 LVTLESGGSGGVV 308
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 3e-06
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699
W + ++ H+ V + + SGSDD ++K+WS L L
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 53
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (100), Expect = 7e-05
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWS 665
DI ++++ Y ++ S ++ +V+VWD L ++ H RV+S
Sbjct: 123 DIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 182
Query: 666 IDFSSADPTLLASGSDDGSVKLWSINQ 692
+ F D + SGS D S+++W +
Sbjct: 183 LQF---DGIHVVSGSLDTSIRVWDVET 206
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (87), Expect = 0.003
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669
++I S + + ++VW + L + H VWS
Sbjct: 28 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 66
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 5e-08
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV KI D ++ + Q +K+ + + + E L + + SD++
Sbjct: 158 ILVGENYVAKIADFGLS------RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVLL+E+ G L + L + +P RP
Sbjct: 212 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 271
Query: 315 KMGELLQ--SEFLNEPRDSM 332
++L + L E + +
Sbjct: 272 SFAQILVSLNRMLEERKTYV 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.5 bits (125), Expect = 6e-08
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Query: 219 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--------PFS 270
K+ ++ L T Y S G S D+ LG + +
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219
Query: 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 321
T ++K + + +L FP+E + + + P L
Sbjct: 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 8e-08
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
Y SPE L +SD++ LG ++++L PF G E ++ P+
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--- 231
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
KF +A LL + + R E+ L
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 264
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 1e-07
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289
+ +PE L + SD++ GVLL+E+F G L+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
+ + H PS RP +L++
Sbjct: 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.4 bits (122), Expect = 2e-07
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ PE + + SD++ GV+L+E+F G + +R +
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP 264
Query: 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
+ + P+ RP + +
Sbjct: 265 ENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.1 bits (120), Expect = 2e-07
Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSR--SQVLTEMREHERRVWSIDFSSADPTLLASGSD 681
S ++A+ + + V VW++++ + H + + T + S
Sbjct: 230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQ 288
Query: 682 DGSVKLWSI 690
D ++K W++
Sbjct: 289 DSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 47.7 bits (111), Expect = 2e-06
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701
+ H + + ++ S+ D L S +G + W I+ I D
Sbjct: 3 SIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPD 52
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.1 bits (120), Expect = 2e-07
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688
++IAS++ + +++W+V+ +V + R L S S +G +
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.7 bits (101), Expect = 4e-05
Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
+I N V V EH + S ASG G+V++W
Sbjct: 30 DKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDT 87
Query: 691 NQ 692
Q
Sbjct: 88 TQ 89
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 3e-07
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + + ASD++ GV ++E+ G + + + + P +
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M 230
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ--SEFLNEPR 329
P S +PS RP+ EL S L E +
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 4e-07
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 45/138 (32%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--------------- 276
T Y SPE L G S SDI+ +G+ L E+ P + K
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 277 --------------------------RTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPE 309
+ + + P F E F L
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 310 PSGRPKMGELLQSEFLNE 327
P+ R + +L+ F+
Sbjct: 286 PAERADLKQLMVHAFIKR 303
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 4e-07
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ + E + + SD++ GV ++EL G + S L PQ
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP----------RDSMEEREAAI 339
+ + + RPK EL+ S+ +P R + +
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295
Query: 340 ELREQIDEEEL 350
R +DEE++
Sbjct: 296 FYRALMDEEDM 306
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.7 bits (118), Expect = 4e-07
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+ +PE LA S SD++ GVLL+E+ G + ++ L +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 294 KFPKEASFCLWLLHPEPSGRPKMGELLQ 321
K PS RP E+ Q
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 6e-07
Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 28/121 (23%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE----------------- 274
T WY +PE L + + D++ +G + E+F F +
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 275 ---KTRTMSSLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLN 326
+ + Q + KF + L L P+ R L +
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
Query: 327 E 327
+
Sbjct: 298 D 298
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-06
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE + S SD++ GV ++E P+ + K + + + +
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKGPEVMAFIEQGKRME 232
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 336
+ P E + + RP + Q + S+ +
Sbjct: 233 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQR--MRACYYSLASKV 277
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (92), Expect = 7e-04
Identities = 8/88 (9%), Positives = 27/88 (30%)
Query: 67 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 126
L ++L + + V + Q+ + + V ++ ++ + ++ +
Sbjct: 94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 153
Query: 127 ASCSDSGSDSHEEGLNTQNMETKDLSSP 154
G+D + +P
Sbjct: 154 GLSKALGADDSYYTARSAGKWPLKWYAP 181
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.9 bits (112), Expect = 2e-06
Identities = 14/136 (10%), Positives = 47/136 (34%), Gaps = 11/136 (8%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECD--------AIINENRDIHYPVVEMASRSKLSS 622
++ E +A + ++ ++ V D + R + + ++S
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256
Query: 623 ICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD 682
I ++ K + + +G++ W++ + + + + + +L + D
Sbjct: 257 IEFSPRHKFLYTAGS-DGIISCWNLQTRKKIKNFAKFNE-DSVVKIA-CSDNILCLATSD 313
Query: 683 GSVKLWSINQAILLLH 698
+ K + + L+
Sbjct: 314 DTFKTNAAIDQTIELN 329
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.5 bits (111), Expect = 3e-06
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
Q++ + + + I +LL S DGS+ ++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFD 41
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 1e-05
Identities = 10/71 (14%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDV---SRSQVLTEMREHERRVWSIDFSSADPTLLA 677
S I KS + ++++G + V+ +++ L + ++ + +F +
Sbjct: 15 SDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 678 SGSDDGSVKLW 688
G+ G +
Sbjct: 74 VGTVQGEILKV 84
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (111), Expect = 3e-06
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 32/130 (24%)
Query: 233 METNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
+ T WY P+ L GA + S + D++ G + EL P G + + + +
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 289 P---------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 320
P ++ K LL P R E L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 321 QSEFLNEPRD 330
Q + ++
Sbjct: 282 QHPYFSDFCP 291
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 30/126 (23%)
Query: 235 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL--------- 282
T WY +PE L GA D++ +G +L EL PF G+ ++ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222
Query: 283 -------------RHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEF 324
+ P L A L P R + L+ ++
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282
Query: 325 LNEPRD 330
+
Sbjct: 283 FSNRPG 288
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.6 bits (110), Expect = 5e-06
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
Y +PE ++ P + + D + G+L++E+ PF +T + + +
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-DSNTMKTYEKILNA--ELRFPP 222
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F ++ L+ + S R + + N P
Sbjct: 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 258
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 46.7 bits (109), Expect = 6e-06
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
++A L I + + V V D + L + E + SI+
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSIN 306
Query: 668 FSS-ADPTLLASGSDDGSVKLW 688
S P L A + D ++ +
Sbjct: 307 VSQDEKPLLYALSTGDKTLYIH 328
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 6e-06
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + + SD++ G+ L+ELF G +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
P E +P RP +++Q
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 7e-06
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y +PE L A D + LGV+++E+ C PF + + L + P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR- 226
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
EA S LL +P R G E +
Sbjct: 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 7e-06
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ SPE L + SD++ GV+L+E+ G + + + L +
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257
Query: 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322
P RP E++ S
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 1e-05
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 34/150 (22%)
Query: 237 WYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--- 289
WY +PE + + DI+ +G ++ E+ F + + ++ PP
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242
Query: 290 -------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 323
+L A + +L + R GE L
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302
Query: 324 FLNEPRDSMEEREAAIELREQIDEEELLLE 353
+ D+ +E + + + D+ + L+
Sbjct: 303 YFESLHDTEDEPQVQ-KYDDSFDDVDRTLD 331
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+ A G ++D + LG +LF+L PF + K + + +L
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 230
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F E S LL + + R E P
Sbjct: 231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV---LPPQL 291
+ +PE + + SD++ GVLL+E+F ++ + R+ +
Sbjct: 199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 258
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
E L H EPS RP EL++
Sbjct: 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 31/125 (24%)
Query: 237 WYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 292
WY +PE L G S A DI+ LG + E+ F E + R P +++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 293 LK-----------FPKEA----------------SFCLWLLHPEPSGRPKMGELLQSEFL 325
FPK A S +LH +P+ R L F
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 326 NEPRD 330
+
Sbjct: 287 QDVTK 291
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 2e-05
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 15/82 (18%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR------------EHERRVWSIDFS 669
S+ + S S + +G ++VWD H + +I+
Sbjct: 19 SVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERD 75
Query: 670 SADPTLLASGSDDGSVKLWSIN 691
+ + L+A+ S G + + I
Sbjct: 76 AFELCLVATTSFSGDLLFYRIT 97
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.9 bits (99), Expect = 9e-05
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 659 HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
H+ ++S+ + S S DG +K+W
Sbjct: 13 HDADIFSVSAC---NSFTVSCSGDGYLKVWDNKL 43
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.1 bits (97), Expect = 2e-04
Identities = 14/141 (9%), Positives = 46/141 (32%), Gaps = 21/141 (14%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVF-----ECDAIINENRDIHYPVVEMASRSKLSSICW 625
+ S+S + + +KV+ + + +++ + L +I
Sbjct: 17 IFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIER 74
Query: 626 NSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV--------------WSIDFSSA 671
+++ +A+++F G + + ++R ++ + + W
Sbjct: 75 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL 134
Query: 672 DPTLLASGSDDGSVKLWSINQ 692
L + G+ +W +
Sbjct: 135 LSHRLVATDVKGTTYIWKFHP 155
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.003
Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 16/143 (11%)
Query: 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622
+ S S+ G L A N +++ E + + S S S
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237
Query: 623 ICWNSYIKSQIASS-NFEGVVQVWD-------------VSRSQVLTEMREHERRVWSIDF 668
IA N G + +++ SQ H V S+ F
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 297
Query: 669 SSADPTLLASGSDDGSVKLWSIN 691
+ + TL S DG ++ W +
Sbjct: 298 NDSGETL-CSAGWDGKLRFWDVK 319
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 7/65 (10%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
+ ++ + V++ +D+ ++ + + +S++ S D + + G G
Sbjct: 244 FSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVS-TDGSTVWLGGALG 301
Query: 684 SVKLW 688
+ +
Sbjct: 302 DLAAY 306
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 45.1 bits (105), Expect = 2e-05
Identities = 11/123 (8%), Positives = 30/123 (24%), Gaps = 10/123 (8%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627
S L F D + A A + + + +
Sbjct: 208 SMLYTIARFKDDKQDPATADLLYGYLSV--------DLKTGKTHTQEFADLTELYFTGLR 259
Query: 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
K + +D+ + +++ + + + F L G + +
Sbjct: 260 SPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFD-KKGDKLYLGGTFNDLAV 317
Query: 688 WSI 690
++
Sbjct: 318 FNP 320
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 3e-05
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 237 WYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 289
Y +P+ + G A D + LGVL++EL PF T + + + + + R+L P
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-TVDGEKNSQAEISRRILKSEP 253
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
+ A LL +P R G E
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.1 bits (103), Expect = 3e-05
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 38/207 (18%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 256
+L+ + KI D + + + + + WY +PE + + + DI+
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR--WYRAPEIMLNSKGYTKSIDIW 197
Query: 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF------------------ 295
+G +L E+ F + L P Q L
Sbjct: 198 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 257
Query: 296 -----------PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 344
K +L P R ++ + L +L + D +E A +
Sbjct: 258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 317
Query: 345 IDEEELLLEFLLLVQQRKQESAKKLQD 371
++ ++L E L ++ E + Q
Sbjct: 318 MELDDLPKEKL---KELIFEETARFQP 341
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 43.7 bits (101), Expect = 5e-05
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
IAS + + VW+++ LT + + +V + S L + V + I
Sbjct: 8 IASPESQQI-HVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 691 NQA 693
Sbjct: 67 APD 69
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 38.3 bits (87), Expect = 0.002
Identities = 10/86 (11%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
++ A+ ++ + Y + AS V + + E + +
Sbjct: 225 NFSDTRWAADIHITPDGRHLYACDRTASLITV--FSVSEDGSVLSKEGFQPTETQPRGFN 282
Query: 668 FSSADPTLLASGSDDGSVKLWSINQA 693
+ L+A+G + ++ I
Sbjct: 283 VDHSGKYLIAAGQKSHHISVYEIVGE 308
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 6e-05
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 46/162 (28%)
Query: 233 METNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
+ T WY +PE + + DI+ +G ++ EL F + + LR P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 289 PQLLLKF-----------------------------PKEASFCLWLLHPEPSGRPKMGEL 319
LLK P +L + R +
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 320 LQSEFLNEPRD------------SMEEREAAI-ELREQIDEE 348
L + + D S E R+ I E + +E
Sbjct: 299 LAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 7e-05
Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 30/128 (23%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST-----------------G 272
+ A + + D++ G +L EL F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 273 EEKTRTMSSLRHRVLPPQL---------LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQS 322
E+ R M+ PQ+ + P EA + C LL P+ R E
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 323 EFLNEPRD 330
F +E RD
Sbjct: 304 SFFDELRD 311
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 1e-04
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 49/249 (19%)
Query: 114 VMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170
H + FI + + + L + E L D L R T
Sbjct: 50 QTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSL-----FDYLNRYTVTVEGM 102
Query: 171 LQLVTAPTNDLSEASCMQSSSAYGTHVV---------LVEGMQEHKILDNRVNVEQVEEK 221
++L + + L+ + + LV+ I D + V + +
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSA 161
Query: 222 KQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVLLFELF--------- 266
+ + T Y +PE L + +DIY +G++ +E+
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 267 ----CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFC----------LWLLHPEPSG 312
P+ ++ +R V +L P C + +
Sbjct: 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281
Query: 313 RPKMGELLQ 321
R + +
Sbjct: 282 RLTALRIKK 290
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
IA+S + V DV+ ++V + S + + + V +
Sbjct: 6 IANSE-SDNISVIDVTSNKVTATI-PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 39.5 bits (90), Expect = 0.001
Identities = 5/68 (7%), Positives = 17/68 (25%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
K+ + + + + + +T I + + + S
Sbjct: 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN 266
Query: 684 SVKLWSIN 691
+V +
Sbjct: 267 TVSVIDTA 274
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 31/122 (25%)
Query: 237 WYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEE------------------ 274
WY +P+ L G+ S DI+ +G + E+ F E
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 275 --------KTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
K ++ + L + +L +P+ R + L+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 326 NE 327
E
Sbjct: 285 KE 286
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 43/311 (13%), Positives = 93/311 (29%), Gaps = 49/311 (15%)
Query: 44 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103
L V + ++ F ++ + +D ++ Q++ + HS GI
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163
+ +++PS V+ S + + + + T + T+ +P
Sbjct: 141 IHRDLKPSNIVVKSDCTLKIL----DFGLARTAGTSFMMTPYVVTRYYRAP--------- 187
Query: 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 223
L + D+ C+ L G + V +
Sbjct: 188 ----EVILGMGYKENVDIWSVGCIMGEMVRHKI--LFPGRDYIDQWNK---VIEQLGTPC 238
Query: 224 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLR 283
P MK++ N+ + + AG + S
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFP-------------------KLFPDSLFPADSEH 279
Query: 284 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 343
+++ Q +L +P+ R + + LQ ++N D E ++ +
Sbjct: 280 NKLKASQAR-------DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYD 332
Query: 344 -QIDEEELLLE 353
Q+DE E +E
Sbjct: 333 KQLDEREHTIE 343
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.9 bits (95), Expect = 4e-04
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+PE + + A D + LGVL++E+ PF + + +V P
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--- 259
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F + LL + + R + ++ N
Sbjct: 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.6 bits (91), Expect = 0.001
Identities = 31/161 (19%), Positives = 46/161 (28%), Gaps = 51/161 (31%)
Query: 225 FPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSS 281
+ ++T Y SPE L GAP C +DI+ L+FEL F +E
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE-PDEGHSYTKD 240
Query: 282 LRHRVLPPQLLLKFPKE------------------------------------------- 298
H +LL + P
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300
Query: 299 ----ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ F +L +P R G L+ +L + E R
Sbjct: 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIR 341
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 37.6 bits (86), Expect = 0.004
Identities = 7/52 (13%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Query: 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
G + + D +++ + V S A L D + + +
Sbjct: 42 GQIALVDGDSKKIVKVIDTGYA-VHISRMS-ASGRYLLVIGRDARIDMIDLW 91
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 712 | |||
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.98 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.98 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.98 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.97 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.97 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.96 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.95 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.88 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.85 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.83 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.82 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.82 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.81 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.79 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.79 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.79 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.78 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.78 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.78 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.77 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.74 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.73 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.73 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.71 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.71 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.68 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.64 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.64 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.61 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.61 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.57 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.56 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.55 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.52 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.46 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.46 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.45 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.35 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.18 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.18 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.04 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.03 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.03 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.02 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.02 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.94 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.88 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.84 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.65 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.64 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.54 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.49 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.47 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.45 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.43 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.14 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.05 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.68 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.66 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.51 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.5 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.35 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.26 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.11 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 96.65 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.53 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.4 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 96.38 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 96.31 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 96.1 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 94.72 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 94.57 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 93.77 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 93.76 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 93.57 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.2 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 92.57 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 91.53 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 90.45 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 89.86 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 89.57 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 88.57 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 87.68 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 86.17 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 84.51 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 84.03 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 82.78 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 80.36 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-41 Score=343.91 Aligned_cols=211 Identities=13% Similarity=0.142 Sum_probs=164.7
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+++++ ++.+ ...++++||| .|++|.++|.+.. .+++.+++.|++||+.||+|||++||+
T Consensus 51 ~~Ei~~l~~l~HpnIv~~~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~~Ii 125 (271)
T d1nvra_ 51 KKEICINKMLNHENVVKFYG-HRRE---GNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGIT 125 (271)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEee-eecc---CceeEEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 35667899999999999888 5533 3467888887 4889999996544 599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 126 HrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~---------------------------------------------- 159 (271)
T d1nvra_ 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 159 (271)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred cCcccHHHEEECCCCCEEEccchhheeeccCCcc----------------------------------------------
Confidence 9999999999999999999999998543111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~ 263 (712)
......+||+.|||||++.+..+ +.++|||||||++|
T Consensus 160 ------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvily 197 (271)
T d1nvra_ 160 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197 (271)
T ss_dssp ------------------------------------------CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHH
Confidence 00011579999999999988875 67899999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
||++ ||................... .......+...+||.+||+.||++|||++|+|+||||+...
T Consensus 198 eml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l 267 (271)
T d1nvra_ 198 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 267 (271)
T ss_dssp HHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence 9998 675544443444443333322 22333445566999999999999999999999999998653
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-40 Score=338.75 Aligned_cols=205 Identities=15% Similarity=0.178 Sum_probs=167.0
Q ss_pred ccceeeccCCCCCccccccccccc-ccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
+|..+|++++||||+++++ ++++ ..+...++++||+ .|++|.+++.+.. .+++.+++.|++||+.||+|||++|
T Consensus 57 ~E~~il~~l~HpnIv~~~~-~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~~~~ 134 (270)
T d1t4ha_ 57 EEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPP 134 (270)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHhCCCCCeeeEEE-EEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5666799999999999998 5543 3334567888887 5899999995543 4999999999999999999999999
Q ss_pred ceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 IvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|+||||||+|||++ .++.+||+|||+++.....
T Consensus 135 IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~---------------------------------------------- 168 (270)
T d1t4ha_ 135 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---------------------------------------------- 168 (270)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT----------------------------------------------
T ss_pred EEeCCcChhhceeeCCCCCEEEeecCcceeccCC----------------------------------------------
Confidence 99999999999997 5789999999988421110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|||||++.+ .|+.++|||||||+
T Consensus 169 ----------------------------------------------~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvi 201 (270)
T d1t4ha_ 169 ----------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 201 (270)
T ss_dssp ----------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCcccCccccCHHHhCC-CCCCcCchhhHHHH
Confidence 0011579999999999875 59999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
+|||++ ||.........+..+.....|..+... .+...+||.+||..||++|||++|+|+||||+
T Consensus 202 lyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 202 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999 787665566666777776666655544 45566999999999999999999999999996
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-39 Score=338.48 Aligned_cols=206 Identities=16% Similarity=0.185 Sum_probs=163.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ...++++||| .|++|.+++.+. .+++.+++.|++||+.||.|||++||||
T Consensus 66 ~E~~il~~l~HpnIv~~~~-~~~~---~~~~~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~iiH 139 (293)
T d1yhwa1 66 NEILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIH 139 (293)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeEeE-EEEE---CCEEEEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4566789999999999888 5533 3457778887 589999988543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.......
T Consensus 140 rDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~------------------------------------------------ 171 (293)
T d1yhwa1 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 171 (293)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred cCCcHHHeEECCCCcEeeccchhheeeccccc------------------------------------------------
Confidence 99999999999999999999999854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus 172 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyem 209 (293)
T d1yhwa1 172 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (293)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCCccChhhhcCCCCCchhceehHhHHHHHH
Confidence 00115799999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++ ||..................+...+.. .+...+||.+||..||.+|||+.|+|+||||+..
T Consensus 210 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred hhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 99 676555444444444443333333333 4455699999999999999999999999999754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-40 Score=334.31 Aligned_cols=202 Identities=17% Similarity=0.228 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ ...++++||| .|++|.++|.+.+ .+++.+++.|++||+.||+|||++||||
T Consensus 55 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~~ivH 129 (263)
T d2j4za1 55 REVEIQSHLRHPNILRLYG-YFHD---ATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIH 129 (263)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhcCCCCCCeEEE-EEEE---CCEEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4566889999999999888 5533 3457788887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++......
T Consensus 130 rDiKp~Nill~~~~~~kl~DFG~a~~~~~~-------------------------------------------------- 159 (263)
T d2j4za1 130 RDIKPENLLLGSAGELKIADFGWSVHAPSS-------------------------------------------------- 159 (263)
T ss_dssp CCCCGGGEEECTTSCEEECCCCSCSCCCCC--------------------------------------------------
T ss_pred eeeccccceecCCCCEeecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|||||++.+..|+.++|||||||++|||
T Consensus 160 ------------------------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel 197 (263)
T d2j4za1 160 ------------------------------------------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 197 (263)
T ss_dssp ------------------------------------------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
++ ||...... ..+..+....++ ......+...+||.+||++||++|||++|+|+||||+.
T Consensus 198 l~G~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 198 LVGKPPFEANTYQ-ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHTTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCC-CCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 99 77554433 344444333221 11123345569999999999999999999999999974
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-39 Score=335.13 Aligned_cols=209 Identities=13% Similarity=0.152 Sum_probs=162.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ ...++++||| .|++|.+++.+....+++.+++.|++||+.||.|||++||+|
T Consensus 58 ~E~~il~~l~HpnIv~l~~-~~~~---~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivH 133 (288)
T d2jfla1 58 VEIDILASCDHPNIVKLLD-AFYY---ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 133 (288)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEee---CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 4556889999999999888 5533 3457778887 589999998555556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++.......
T Consensus 134 rDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~------------------------------------------------- 164 (288)
T d2jfla1 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTI------------------------------------------------- 164 (288)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECHHHH-------------------------------------------------
T ss_pred eecChhheeECCCCCEEEEechhhhccCCCc-------------------------------------------------
Confidence 9999999999999999999999884321000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 260 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGv 260 (712)
.......||+.|+|||++. +..|+.++|||||||
T Consensus 165 -----------------------------------------~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGv 203 (288)
T d2jfla1 165 -----------------------------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 203 (288)
T ss_dssp -----------------------------------------HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHH
Confidence 0001157899999999984 445899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCC-ch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|||++ ||....... .+..+.....+ .. .....+...+||.+||+.||++|||+.|+|+||||+....
T Consensus 204 ilyemltg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~~ 277 (288)
T d2jfla1 204 TLIEMAEIEPPHHELNPMR-VLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277 (288)
T ss_dssp HHHHHHHSSCTTTTSCGGG-HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCCC
T ss_pred HHHHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 9999999 666544433 33333333222 22 2233455669999999999999999999999999986543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-39 Score=341.81 Aligned_cols=205 Identities=18% Similarity=0.161 Sum_probs=157.7
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gI 103 (712)
.+|..+|+.++||||+++++ +|.+ ...++++||| .|++|.+++.+.+ .+++.+++.++.||+.||+|||++ ||
T Consensus 52 ~~Ei~il~~l~HpnIv~l~~-~~~~---~~~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~~I 126 (322)
T d1s9ja_ 52 IRELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKI 126 (322)
T ss_dssp HHHGGGGGGCCCTTBCCEEE-EEEC---SSEEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 36777899999999999998 5533 3457888887 5899999995544 499999999999999999999984 99
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||||+.+|.+||+|||+++.....
T Consensus 127 iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~------------------------------------------------ 158 (322)
T d1s9ja_ 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------ 158 (322)
T ss_dssp CCSCCSGGGEEECTTCCEEECCCCCCHHHHHH------------------------------------------------
T ss_pred EccccCHHHeeECCCCCEEEeeCCCccccCCC------------------------------------------------
Confidence 99999999999999999999999988321000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||++|+|||++.+..|+.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ 194 (322)
T d1s9ja_ 159 --------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 194 (322)
T ss_dssp --------------------------------------------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHH
Confidence 001157999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHh-----------------------------------------hcccCCCchhhh-cCchh
Q 005147 264 ELFC---PFSTGEEKTRTMSS-----------------------------------------LRHRVLPPQLLL-KFPKE 298 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~-~~~~~ 298 (712)
||++ ||.+.......... +.....|..... ..++.
T Consensus 195 ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 274 (322)
T d1s9ja_ 195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 274 (322)
T ss_dssp HHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHH
Confidence 9998 77654322111110 000111111111 23455
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.+||.+||..||.+|||++|+|+||||+.
T Consensus 275 ~dli~~~L~~dP~~R~ta~e~L~Hpf~~~ 303 (322)
T d1s9ja_ 275 QDFVNKCLIKNPAERADLKQLMVHAFIKR 303 (322)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence 69999999999999999999999999975
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-39 Score=330.76 Aligned_cols=206 Identities=17% Similarity=0.227 Sum_probs=154.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+|..+|+.++||||+++++ ++.+ .....++++||| .|++|.+++.+ ....+++.+++.|+.||+.||+|||++|
T Consensus 52 ~E~~il~~l~HpnIv~~~~-~~~~-~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~ 129 (269)
T d2java1 52 SEVNLLRELKHPNIVRYYD-RIID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 129 (269)
T ss_dssp HHHHHTTSCCCTTBCCEEE-EEEC-----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCEeeEEE-EEEe-CCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566899999999999888 4433 233456777777 58999999842 3445999999999999999999999987
Q ss_pred -----ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 103 -----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 103 -----IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||||||||+||||+.++.+||+|||+++...... .
T Consensus 130 ~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---------------------------------~------- 169 (269)
T d2java1 130 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S------- 169 (269)
T ss_dssp C---------CCGGGEEECTTSCEEECCHHHHHHC---------------------------------------------
T ss_pred CCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC---------------------------------C-------
Confidence 9999999999999999999999999885432110 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
......||+.|||||++.+..|+.++||||
T Consensus 170 --------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwS 199 (269)
T d2java1 170 --------------------------------------------------FAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 199 (269)
T ss_dssp --------------------------------------------------------CCCSCCCHHHHTTCCCCHHHHHHH
T ss_pred --------------------------------------------------ccccCCCCcccCCHHHHcCCCCChHHHHHh
Confidence 001157899999999999999999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|||++|||++ ||..... ......+.....+.......+...+||.+||+.||.+|||+.|+|+|||+
T Consensus 200 lGvilyel~tg~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 200 LGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred hCHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 9999999999 6765443 34455555554443333344566699999999999999999999999996
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-38 Score=332.57 Aligned_cols=206 Identities=17% Similarity=0.187 Sum_probs=155.3
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+++++ ++.+ ...++++||| .|++|.++|...+ .+++.+++.|+.||+.||+|||++||+
T Consensus 55 ~~Ei~il~~l~HpnIv~l~~-~~~~---~~~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ii 129 (307)
T d1a06a_ 55 ENEIAVLHKIKHPNIVALDD-IYES---GGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIV 129 (307)
T ss_dssp CHHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhceee
Confidence 35667899999999999888 5533 3457788887 5899999996544 499999999999999999999999999
Q ss_pred eccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||++. .++.+|++|||+++......
T Consensus 130 HrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~--------------------------------------------- 164 (307)
T d1a06a_ 130 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--------------------------------------------- 164 (307)
T ss_dssp CSCCCGGGEEESSSSTTCCEEECCC-------------------------------------------------------
T ss_pred eEEecccceeecccCCCceEEEeccceeEEccCCC---------------------------------------------
Confidence 999999999995 46889999999884321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|||||++.+..|+.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvi 198 (307)
T d1a06a_ 165 ----------------------------------------------VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 198 (307)
T ss_dssp ------------------------------------------------------CTTSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHH
Confidence 0011578999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|||++ ||...... ..+..+..... +... ....+...+||.+||..||++|||+.|+|+||||+..
T Consensus 199 lyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 270 (307)
T d1a06a_ 199 AYILLCGYPPFYDENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270 (307)
T ss_dssp HHHHHHSSCSCCCSSHH-HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 999999 77654443 33344433322 2222 2334566699999999999999999999999999864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-38 Score=332.08 Aligned_cols=204 Identities=15% Similarity=0.120 Sum_probs=160.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ ...++++|||+ |++|..++... ..+++.+++.|++||+.||.|||++||||
T Consensus 64 ~Ei~il~~l~HpnIv~~~~-~~~~---~~~~~iv~E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~iiH 138 (309)
T d1u5ra_ 64 KEVRFLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIH 138 (309)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHCCCCCEeeEEE-EEEE---CCEEEEEEEecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 5667899999999999888 5533 34678888885 77776665333 45999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||++......
T Consensus 139 rDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-------------------------------------------------- 168 (309)
T d1u5ra_ 139 RDVKAGNILLSEPGLVKLGDFGSASIMAPA-------------------------------------------------- 168 (309)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCBSSSSB--------------------------------------------------
T ss_pred cCCCcceEEECCCCCEEEeecccccccCCC--------------------------------------------------
Confidence 999999999999999999999988432100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll 262 (712)
....||+.|||||++.+ ..|+.++|||||||++
T Consensus 169 --------------------------------------------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvil 204 (309)
T d1u5ra_ 169 --------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204 (309)
T ss_dssp --------------------------------------------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHH
T ss_pred --------------------------------------------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHH
Confidence 01468999999999864 3489999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||....... .+..+.....+...... .+...+||.+||..||.+|||+.|+|+||||.....
T Consensus 205 yel~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~ 275 (309)
T d1u5ra_ 205 IELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (309)
T ss_dssp HHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCC
Confidence 99998 666554433 33333333333333333 345569999999999999999999999999986544
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.6e-38 Score=333.94 Aligned_cols=209 Identities=19% Similarity=0.263 Sum_probs=167.1
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+++++ ++++ ...++++||+ .|++|.+++.+.+..+++.+++.|++||+.||+|||++|||
T Consensus 74 ~~Ei~il~~l~HpnIv~~~~-~~~~---~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ii 149 (352)
T d1koba_ 74 KNEISIMNQLHHPKLINLHD-AFED---KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 149 (352)
T ss_dssp HHHHHHHTTCCSTTBCCEEE-EEEC---SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999888 5533 3567778887 58999998866666799999999999999999999999999
Q ss_pred eccCCCCceeec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 105 VHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 105 HrDLkP~NIll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||+||||+ ..+.+||+|||++........
T Consensus 150 HRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~--------------------------------------------- 184 (352)
T d1koba_ 150 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--------------------------------------------- 184 (352)
T ss_dssp CCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC---------------------------------------------
T ss_pred ecccccccccccccCCCeEEEeecccceecCCCCc---------------------------------------------
Confidence 999999999998 568999999999854322100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....||+.|+|||++.+..|+.++|||||||++
T Consensus 185 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 218 (352)
T d1koba_ 185 ----------------------------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 218 (352)
T ss_dssp ----------------------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHH
T ss_pred ----------------------------------------------eeeccCcccccCHHHHcCCCCCCccchHHHHHHH
Confidence 0114689999999999999999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||...... ..+..+.... ++... ....+...+||.+||+.||.+|||+.|+|+||||+....
T Consensus 219 yelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 219 YVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 99999 67654443 3344443332 23323 334456669999999999999999999999999987544
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.5e-38 Score=333.71 Aligned_cols=208 Identities=17% Similarity=0.241 Sum_probs=165.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ ...++++||+ .|++|.++|.+....+++.+++.|++||+.||+|||++||||
T Consensus 72 ~E~~il~~l~HpnIv~~~~-~~~~---~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH 147 (350)
T d1koaa2 72 KEIQTMSVLRHPTLVNLHD-AFED---DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 147 (350)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEEE---TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 5667899999999999988 5533 3567888887 589999999655556999999999999999999999999999
Q ss_pred ccCCCCceeec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++ .++.+||+|||+++..+...
T Consensus 148 rDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------------------------------------- 180 (350)
T d1koaa2 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 180 (350)
T ss_dssp CCCCGGGEEESSTTSCCEEECCCTTCEECCTTS-----------------------------------------------
T ss_pred eeechhHeeeccCCCCeEEEeecchheeccccc-----------------------------------------------
Confidence 99999999996 35789999999985432210
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||++|||||++.+..|+.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvily 216 (350)
T d1koaa2 181 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 216 (350)
T ss_dssp --------------------------------------------CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHH
Confidence 001157899999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||...... ..+..+.... .+.... ...+...+||.+||+.||++|||+.|+|+||||+....
T Consensus 217 ell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~ 288 (350)
T d1koaa2 217 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288 (350)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 9998 67654433 3444444332 223332 33455669999999999999999999999999987644
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-38 Score=326.33 Aligned_cols=208 Identities=18% Similarity=0.246 Sum_probs=162.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ...++++||| .|++|.+++...+ .+++.+++.++.||+.||+|||++||||
T Consensus 57 ~E~~il~~l~HpnIv~l~~-~~~~---~~~~~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~iiH 131 (288)
T d1uu3a_ 57 RERDVMSRLDHPFFVKLYF-TFQD---DEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIH 131 (288)
T ss_dssp HHHHHHHHCCSTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHcCCCCeeEEEE-EEEE---CCEEEEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhccccEEc
Confidence 4555788999999999888 5533 3457788887 5899999985544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||+++........
T Consensus 132 rDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~----------------------------------------------- 164 (288)
T d1uu3a_ 132 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----------------------------------------------- 164 (288)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEECC----------------------------------------------------
T ss_pred CcCCccccccCCCceEEecccccceecccCCcc-----------------------------------------------
Confidence 999999999999999999999998543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||+.|+|||++.+..|+.++|||||||++|||
T Consensus 165 -----------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyel 203 (288)
T d1uu3a_ 165 -----------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203 (288)
T ss_dssp ----------------------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCccccCceeeccCCCCcccceehhhHHHHHH
Confidence 001125799999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH------HhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------iL~hp~~~~~~ 329 (712)
++ ||...... ..+..+.+..+. ......+...+||.+||+.||.+|||++| +++||||+...
T Consensus 204 l~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~ 274 (288)
T d1uu3a_ 204 VAGLPPFRAGNEY-LIFQKIIKLEYD-FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 274 (288)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHTTCCC-CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred hhCCCCCCCcCHH-HHHHHHHcCCCC-CCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence 99 77655433 344444433221 11234456669999999999999999988 58899998764
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=325.03 Aligned_cols=211 Identities=13% Similarity=0.168 Sum_probs=159.5
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+|..+|+.++||||+++++ ++.+ ...++++||++.+.+...+......+++.+++.|++||+.||+|||++||+|
T Consensus 48 ~~Ei~il~~l~hpnIv~~~~-~~~~---~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiH 123 (299)
T d1ua2a_ 48 LREIKLLQELSHPNIIGLLD-AFGH---KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123 (299)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECC---TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCCCCEeEEEe-eecc---CCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceec
Confidence 35677899999999999888 5533 3457888888755555555455566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++.......
T Consensus 124 rDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~------------------------------------------------ 155 (299)
T d1ua2a_ 124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------ 155 (299)
T ss_dssp CCCCGGGEEECTTCCEEECCCGGGSTTTSCCC------------------------------------------------
T ss_pred ccCCcceEEecCCCccccccCccccccCCCcc------------------------------------------------
Confidence 99999999999999999999999854322200
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~e 264 (712)
.....+||++|+|||++.+. .|+.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 193 (299)
T d1ua2a_ 156 ------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 193 (299)
T ss_dssp ------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccceecChhhccHHHHccCCCCChhhhhhhcchHHHH
Confidence 00114789999999998765 48999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccC----------------------CCch-----hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRV----------------------LPPQ-----LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~----------------------~~~~-----~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|++ ||....+ ...+..+.+.. .+.. .....+...+||.+||+.||++||
T Consensus 194 l~~g~~pf~~~~~-~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~ 272 (299)
T d1ua2a_ 194 LLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI 272 (299)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred HHhCcCCCCCCCH-HHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCc
Confidence 999 4544333 23333222100 0000 112234556999999999999999
Q ss_pred CHHHHhcCcCCCCCcCc
Q 005147 315 KMGELLQSEFLNEPRDS 331 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~~ 331 (712)
|+.|+|+||||+..+.+
T Consensus 273 sa~e~L~Hp~f~~~p~p 289 (299)
T d1ua2a_ 273 TATQALKMKYFSNRPGP 289 (299)
T ss_dssp CHHHHHTSGGGTSSSCC
T ss_pred CHHHHhCCHhhCCCCCC
Confidence 99999999999976543
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-37 Score=326.96 Aligned_cols=205 Identities=19% Similarity=0.255 Sum_probs=163.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ .+.++++||+ .|++|.+++.+.+ .+++.+++.+++||+.||+|||++||||
T Consensus 54 ~E~~il~~l~hp~Iv~l~~-~~~~---~~~~~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~~iiH 128 (337)
T d1o6la_ 54 TESRVLQNTRHPFLTALKY-AFQT---HDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVY 128 (337)
T ss_dssp HHHHHHHSCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCCEEEEEe-eecc---ccccccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhcCccc
Confidence 5566899999999999888 5533 3467777777 5999999995544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++......
T Consensus 129 RDlKP~NILl~~~g~vkl~DFG~a~~~~~~~------------------------------------------------- 159 (337)
T d1o6la_ 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDG------------------------------------------------- 159 (337)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCSCCTT-------------------------------------------------
T ss_pred cccCHHHeEecCCCCEEEeecccccccccCC-------------------------------------------------
Confidence 9999999999999999999999985432110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||++|+|||++.+..|+.++|||||||++|||
T Consensus 160 -----------------------------------------~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyem 198 (337)
T d1o6la_ 160 -----------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198 (337)
T ss_dssp -----------------------------------------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHH
Confidence 001125799999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+||.+||++||.+||+ ++|+++||||+..
T Consensus 199 l~G~~pf~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 199 MCGRLPFYNQDHE-RLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHCCCCCCCcCHH-HHHHHHhcCCC-CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 98 66654443 33333333322 222234566669999999999999994 8999999999864
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.7e-37 Score=331.89 Aligned_cols=204 Identities=17% Similarity=0.174 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
....++++++||||+++++ ++.+ ...+|++||| .|++|.++|.+.. .+++.+++.|++||+.||+|||++||||
T Consensus 56 ~~~~~l~~~~hpnIv~l~~-~~~~---~~~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~iiH 130 (364)
T d1omwa3 56 IMLSLVSTGDCPFIVCMSY-AFHT---PDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 130 (364)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhcCCCCcEEEEEE-EEEE---CCEEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3345678899999999888 5533 2456777777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++......
T Consensus 131 rDlKP~NILl~~~g~iKl~DFGla~~~~~~~------------------------------------------------- 161 (364)
T d1omwa3 131 RDLKPANILLDEHGHVRISDLGLACDFSKKK------------------------------------------------- 161 (364)
T ss_dssp CCCSGGGEEECSSSCEEECCCTTCEECSSSC-------------------------------------------------
T ss_pred eeeccceeEEcCCCcEEEeeeceeeecCCCc-------------------------------------------------
Confidence 9999999999999999999999985432110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
.....||+.|+|||++.+ ..|+.++|||||||+|||
T Consensus 162 -------------------------------------------~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilye 198 (364)
T d1omwa3 162 -------------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 198 (364)
T ss_dssp -------------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccccccchhHHhhcCCCCCcccchhHHHHHHHH
Confidence 011468999999999975 459999999999999999
Q ss_pred hhC---CCCCChhhH--HHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKT--RTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
|++ ||....... ....... ..+...+ ...+...+||.+||..||++||| ++|+++||||+...
T Consensus 199 mltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~ 272 (364)
T d1omwa3 199 LLRGHSPFRQHKTKDKHEIDRMTL--TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 272 (364)
T ss_dssp HHHSSCSSCSSCSSCHHHHHHHSS--SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCC
Confidence 999 675433221 1111111 1222222 33456669999999999999999 79999999998753
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.9e-37 Score=328.32 Aligned_cols=202 Identities=12% Similarity=0.089 Sum_probs=160.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ...+++++++ .|++|.+++.+.+ .+++.+++.|+.||+.||.|||++||||
T Consensus 90 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~iiH 164 (350)
T d1rdqe_ 90 NEKRILQAVNFPFLVKLEF-SFKD---NSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIY 164 (350)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHcCCCcEeeccc-cccc---ccccccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 4556789999999999888 5532 2344555555 7999999995544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++.....
T Consensus 165 RDIKP~NILl~~~g~ikL~DFG~a~~~~~~-------------------------------------------------- 194 (350)
T d1rdqe_ 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGR-------------------------------------------------- 194 (350)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred CcCCHHHcccCCCCCEEeeeceeeeecccc--------------------------------------------------
Confidence 999999999999999999999998543111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....||+.|||||++.+..|+.++|||||||++|||
T Consensus 195 -------------------------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyem 231 (350)
T d1rdqe_ 195 -------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231 (350)
T ss_dssp -------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCccccCCHHHHcCCCCCccccccchhHHHHHH
Confidence 0014689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||..... ...+..+.....+ ......++..+||.+||..||.+|+ |++++++||||+..
T Consensus 232 ltG~~Pf~~~~~-~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 232 AAGYPPFFADQP-IQIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHSSCSSCCSSH-HHHHHHHHHCCCC-CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HhCCCCCCCcCH-HHHHHHHhcCCCC-CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99 7765443 3444444443322 1223445666999999999999995 99999999999875
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-37 Score=322.33 Aligned_cols=203 Identities=14% Similarity=0.168 Sum_probs=161.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++. ....++++||+ .|++|.+++.... .+++.+++.|++||+.||+|||++||||
T Consensus 53 ~E~~il~~l~HpnIv~~~~-~~~---~~~~~~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~iiH 127 (316)
T d1fota_ 53 DERLMLSIVTHPFIIRMWG-TFQ---DAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIY 127 (316)
T ss_dssp HHHHHHHSCCBTTBCCEEE-EEE---CSSEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHhccCcChhheee-eEe---eCCeeeeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhccCcEEc
Confidence 4566889999999999888 553 23467777777 5899999885544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++.....
T Consensus 128 rDiKp~NILl~~~g~vkL~DFG~a~~~~~~-------------------------------------------------- 157 (316)
T d1fota_ 128 RDLKPENILLDKNGHIKITDFGFAKYVPDV-------------------------------------------------- 157 (316)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------------
T ss_pred cccCchheeEcCCCCEEEecCccceEeccc--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
....+||+.|||||++.+..|+.++|||||||++|||
T Consensus 158 -------------------------------------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyem 194 (316)
T d1fota_ 158 -------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 194 (316)
T ss_dssp -------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCcccccCHHHHcCCCCCchhhccccchhHHHH
Confidence 0115789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||...... ..+..+.....+ ......+...+++.+||..||.+|| |++++|+||||+...
T Consensus 195 ltG~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~ 264 (316)
T d1fota_ 195 LAGYTPFYDSNTM-KTYEKILNAELR-FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264 (316)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred HhCCCCCCCcCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence 99 77655443 333333333221 1122345566999999999999996 999999999998763
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-37 Score=320.02 Aligned_cols=206 Identities=18% Similarity=0.262 Sum_probs=161.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.+ ...++++||| .|++|.++|...+ .+++.+++.|++||+.||+|||++||+|
T Consensus 62 ~E~~il~~l~HpnIv~~~~-~~~~---~~~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~ivH 136 (293)
T d1jksa_ 62 REVSILKEIQHPNVITLHE-VYEN---KTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAH 136 (293)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcceee
Confidence 5666899999999999888 5543 3467788887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.+| .+|++|||++.......
T Consensus 137 rDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~--------------------------------------------- 171 (293)
T d1jksa_ 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--------------------------------------------- 171 (293)
T ss_dssp CCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC---------------------------------------------
T ss_pred cccccceEEEecCCCcccceEecchhhhhhcCCCc---------------------------------------------
Confidence 99999999998766 49999999884321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..|+.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvi 205 (293)
T d1jksa_ 172 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205 (293)
T ss_dssp ----------------------------------------------BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCCcccCHHHHcCCCCCCcccchhhhHH
Confidence 0011468999999999999899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|||++ ||...... ..+..+.... .+..... ..+...+||.+||..||.+|||++|+|+||||+...
T Consensus 206 lyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~ 278 (293)
T d1jksa_ 206 TYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278 (293)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred HHHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 999999 77654443 3444444332 2333333 344556999999999999999999999999998643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-37 Score=323.85 Aligned_cols=205 Identities=19% Similarity=0.245 Sum_probs=156.4
Q ss_pred eccCCCCCcccccccccccc-cccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+...+||||+++++ +|++. .....+|++|||+ ||+|.++|.+. ...+++.+++.|++||+.||+|||++||+||||
T Consensus 59 ~~~~~hpnIv~l~~-~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDi 137 (335)
T d2ozaa1 59 WRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 137 (335)
T ss_dssp HHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred HHhcCCCCCCeEEE-EEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence 44568999999988 65442 3345788888885 89999999553 456999999999999999999999999999999
Q ss_pred CCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 109 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 109 kP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||+|||++. .+.+|++|||+++......
T Consensus 138 Kp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~------------------------------------------------- 168 (335)
T d2ozaa1 138 KPENLLYTSKRPNAILKLTDFGFAKETTSHN------------------------------------------------- 168 (335)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEECCCCC-------------------------------------------------
T ss_pred cccccccccccccccccccccceeeeccCCC-------------------------------------------------
Confidence 999999985 4579999999985432110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..|+.++|||||||+||+|
T Consensus 169 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~l 206 (335)
T d2ozaa1 169 ------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 206 (335)
T ss_dssp ------------------------------------------CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHH
Confidence 00115789999999999998999999999999999999
Q ss_pred hC---CCCCChhhH---HHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKT---RTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~---~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++ ||....... .....+.... +|... ....+...+||.+||+.||++|||+.|+|+||||...
T Consensus 207 ltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 207 LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp TTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred hhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence 99 564332211 1122222222 22222 2344556699999999999999999999999999754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=9.9e-37 Score=313.68 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=162.0
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|+.+. ||||+++++ ++. ..+.++++||++ |++|.++|+..+ .+++.+++.|+.||+.||+|||++||+
T Consensus 58 ~E~~~l~~l~~hpnIv~~~~-~~~---~~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iv 132 (277)
T d1phka_ 58 KEVDILRKVSGHPNIIQLKD-TYE---TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNIV 132 (277)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEE---CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCeEEEEe-ecc---cCcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 5666788876 999999888 553 345678888885 889999996544 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||+++..+...
T Consensus 133 HrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~------------------------------------------------ 164 (277)
T d1phka_ 133 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGE------------------------------------------------ 164 (277)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred ccccccceEEEcCCCCeEEccchheeEccCCC------------------------------------------------
Confidence 99999999999999999999999985432210
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC------CCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~sDIwSl 258 (712)
.....+||+.|+|||.+.+ ..++.++||||+
T Consensus 165 -------------------------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diwsl 201 (277)
T d1phka_ 165 -------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 201 (277)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHH
T ss_pred -------------------------------------------ceeeeeccCCCCCHHHhhccccccCCCCCchheEccc
Confidence 0011568999999999853 347899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccC--CC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||++|||++ ||....... .+..+.... ++ +......+...+|+.+||++||.+|||++|+|+||||++.
T Consensus 202 Gvilyeml~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 202 GVIMYTLLAGSPPFWHRKQML-MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp HHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred chhhhhhccCCCCCCCCCHHH-HHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 999999999 777655443 333333222 22 2333455666799999999999999999999999999864
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-37 Score=312.40 Aligned_cols=203 Identities=14% Similarity=0.141 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .+++|.+++......+++..++.|+.||+.||+|||++||+|
T Consensus 49 ~E~~~l~~l~HpnIv~~~g-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiH 124 (263)
T d1sm2a_ 49 EEAEVMMKLSHPKLVQLYG-VCLE---QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124 (263)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhcCCCCcccccc-eecc---CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceee
Confidence 4566789999999999988 5533 2456777776 699999999776667899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 125 rDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~----------------------------------------------- 157 (263)
T d1sm2a_ 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------------------------------- 157 (263)
T ss_dssp TTCSGGGEEECGGGCEEECSCC----------------------------------------------------------
T ss_pred cccchhheeecCCCCeEecccchheeccCCCce-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..|+.++|||||||++|||
T Consensus 158 ------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el 195 (263)
T d1sm2a_ 158 ------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195 (263)
T ss_dssp -------------------------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+| |++...........+.....+.......+...+|+.+||+.||++|||+++|++|
T Consensus 196 ~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 196 FSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 98 4544444445555555554443333344566699999999999999999999884
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-36 Score=315.32 Aligned_cols=205 Identities=15% Similarity=0.185 Sum_probs=152.5
Q ss_pred eccCCCCCcccccccccccc--cccCceEEEEeeCCcc-HHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVS-LRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~s-L~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|+..+||||+++++ ++... .....+++++|++++. +..........+++..++.|++||+.||+|||++|||||||
T Consensus 64 l~~~~HpnIv~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDi 142 (305)
T d1blxa_ 64 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 142 (305)
T ss_dssp HHHTCCTTBCCEEE-EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HhhcCCCCcceeee-eecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCC
Confidence 44558999999988 44322 2334678888886444 44444455556999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++..+.+|++|||+++......
T Consensus 143 Kp~NILi~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 170 (305)
T d1blxa_ 143 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 170 (305)
T ss_dssp CGGGEEECTTCCEEECSCCSCCCCCGGG----------------------------------------------------
T ss_pred CccEEEEcCCCCeeecchhhhhhhcccc----------------------------------------------------
Confidence 9999999999999999999874321100
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......||+.|+|||++.+.+|+.++|||||||++|||++
T Consensus 171 ---------------------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g 211 (305)
T d1blxa_ 171 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 211 (305)
T ss_dssp ---------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC
Confidence 0011578999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhccc----------------------CCC---chhhh-cCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 268 --PFSTGEEKTRTMSSLRHR----------------------VLP---PQLLL-KFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~----------------------~~~---~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
||....... .+..+... ..+ ..+.. ..+...+||.+||++||++|||+.|+
T Consensus 212 ~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~ 290 (305)
T d1blxa_ 212 KPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290 (305)
T ss_dssp SCSCCCSSHHH-HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCCHHH-HHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence 666544332 22221110 000 01111 22344589999999999999999999
Q ss_pred hcCcCCCCCc
Q 005147 320 LQSEFLNEPR 329 (712)
Q Consensus 320 L~hp~~~~~~ 329 (712)
|+||||++..
T Consensus 291 L~Hpff~~i~ 300 (305)
T d1blxa_ 291 LSHPYFQDLE 300 (305)
T ss_dssp HTSGGGTTCC
T ss_pred hcChhhcCch
Confidence 9999998764
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-36 Score=311.71 Aligned_cols=203 Identities=17% Similarity=0.222 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ..++++||| .|++|.++|......+++.+++.|+.||+.||+|||++||||
T Consensus 53 ~E~~~l~~l~HpnIv~~~~-~~~~----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivH 127 (276)
T d1uwha_ 53 NEVGVLRKTRHVNILLFMG-YSTA----PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 127 (276)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS----SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeeeE-EEec----cEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEec
Confidence 4667899999999999887 4422 346777777 589999999666566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 128 rDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~----------------------------------------------- 160 (276)
T d1uwha_ 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS----------------------------------------------- 160 (276)
T ss_dssp SCCCGGGEEEETTSSEEECCCCCSCC------------------------------------------------------
T ss_pred cccCHHHEEEcCCCCEEEccccceeeccccCCc-----------------------------------------------
Confidence 999999999999999999999998543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvll 262 (712)
.......||+.|||||++.+. .|+.++|||||||+|
T Consensus 161 -----------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l 199 (276)
T d1uwha_ 161 -----------------------------------------HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199 (276)
T ss_dssp ----------------------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHH
Confidence 000114689999999999643 489999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh---hhcC-chhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||+| ||............+.....++.. .... +...+|+.+||..||.+|||+.+|+++
T Consensus 200 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999 776655444555555554444332 2223 345599999999999999999999874
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-36 Score=319.02 Aligned_cols=206 Identities=19% Similarity=0.259 Sum_probs=163.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++++ ...++++||| .|++|.++|...+..+++.+++.|++||+.||+|||++||+|
T Consensus 50 ~Ei~il~~l~HpnIv~~~~-~~~~---~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiH 125 (321)
T d1tkia_ 50 KEISILNIARHRNILHLHE-SFES---MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp HHHHHHHHSCCTTBCCEEE-EEEE---TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5566899999999999888 5533 3467888888 588999999766656999999999999999999999999999
Q ss_pred ccCCCCceeecCC--CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++.+ +.+|++|||++.......
T Consensus 126 rDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~----------------------------------------------- 158 (321)
T d1tkia_ 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------------------------------------- 158 (321)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccccccceeecCCCceEEEEcccchhhccccCC-----------------------------------------------
Confidence 9999999999854 479999999884431110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||.+.+..|+.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily 194 (321)
T d1tkia_ 159 --------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194 (321)
T ss_dssp --------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccccchhccCCCCCchhhcccHHHHHH
Confidence 001146899999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|++ ||...... ..+..+.... ++..... ..+...+||.+||..||.+|||+.|+|+||||+..
T Consensus 195 ~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 195 VLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 9999 66655443 3444444332 2333333 34556699999999999999999999999999754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-36 Score=312.73 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=159.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ ++.. ..++++||| .|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 58 ~E~~il~~l~HpnIv~l~g-~~~~----~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiH 132 (285)
T d1u59a_ 58 REAQIMHQLDNPYIVRLIG-VCQA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 132 (285)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEES----SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeEee-eecc----CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4666889999999999988 6643 246778887 589999998666666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++..+......
T Consensus 133 rDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~---------------------------------------------- 166 (285)
T d1u59a_ 133 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYY---------------------------------------------- 166 (285)
T ss_dssp CCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE----------------------------------------------
T ss_pred CcCchhheeeccCCceeeccchhhhccccccccc----------------------------------------------
Confidence 9999999999999999999999986543321000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 167 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~ 205 (285)
T d1u59a_ 167 -----------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205 (285)
T ss_dssp -----------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccCccccChHHHhCCCCCccchhhcchHHHHHH
Confidence 000114579999999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+| ||.... ....+..+..+..++......+...+|+.+||..||++|||+.+|++
T Consensus 206 lt~G~~Pf~~~~-~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~ 264 (285)
T d1u59a_ 206 LSYGQKPYKKMK-GPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 264 (285)
T ss_dssp HTTSCCTTTTCC-THHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 87 665443 33455555555544444444456669999999999999999988844
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.6e-36 Score=310.58 Aligned_cols=202 Identities=18% Similarity=0.145 Sum_probs=160.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.++||||+++++ ++. ....++++||| .+|+|.++|. .....+++..++.|+.||+.||+|||++||+
T Consensus 62 ~E~~il~~l~HpnIv~~~~-~~~---~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~ii 137 (287)
T d1opja_ 62 KEAAVMKEIKHPNLVQLLG-VCT---REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 137 (287)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEecCCc-cEe---eCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4566899999999999888 553 23456777777 5899999984 4455689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++........
T Consensus 138 HrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~---------------------------------------------- 171 (287)
T d1opja_ 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 171 (287)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE----------------------------------------------
T ss_pred cCccccCeEEECCCCcEEEccccceeecCCCCce----------------------------------------------
Confidence 9999999999999999999999998543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++.+..|+.++|||||||++||
T Consensus 172 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~e 208 (287)
T d1opja_ 172 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208 (287)
T ss_dssp -------------------------------------------EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeccccccccccChHHHcCCCCCchhhhhhHHHHHHH
Confidence 0011357899999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||+...........+.....++......+...+|+.+||+.||.+|||+.+|++
T Consensus 209 ll~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 209 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 998 565555555555555555444443344456669999999999999999999976
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-36 Score=315.29 Aligned_cols=200 Identities=18% Similarity=0.231 Sum_probs=159.0
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
...++||||+++++ ++.+ ...++++||| .|++|.++|.... .+++.+++.+++||+.||+|||++||+||||||
T Consensus 57 ~~~~~hp~Iv~~~~-~~~~---~~~~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp 131 (320)
T d1xjda_ 57 SLAWEHPFLTHMFC-TFQT---KENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKL 131 (320)
T ss_dssp HHHTTCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred HHhCCCCcEEEEEE-EEcc---CCceeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcc
Confidence 44689999999888 5533 3457788887 6899999995544 489999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+|||++..+.+|++|||+++.......
T Consensus 132 ~NiL~~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------------- 158 (320)
T d1xjda_ 132 DNILLDKDGHIKIADFGMCKENMLGDA----------------------------------------------------- 158 (320)
T ss_dssp GGEEECTTSCEEECCCTTCBCCCCTTC-----------------------------------------------------
T ss_pred cceeecCCCceeccccchhhhcccccc-----------------------------------------------------
Confidence 999999999999999999854321100
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
......||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 159 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~ 201 (320)
T d1xjda_ 159 -------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201 (320)
T ss_dssp -------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred -------------------------------------cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCC
Confidence 0011478999999999999999999999999999999998
Q ss_pred CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH-HHhcCcCCCCC
Q 005147 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 328 (712)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eiL~hp~~~~~ 328 (712)
||...... ..+..+....+ .......+...+||.+||..||.+|||+. ++++||||+..
T Consensus 202 PF~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 202 PFHGQDEE-ELFHSIRMDNP-FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp SSCCSSHH-HHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred CCCCCCHH-HHHHHHHcCCC-CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 77654433 44444443322 22223345666999999999999999995 89999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-36 Score=312.17 Aligned_cols=206 Identities=15% Similarity=0.154 Sum_probs=161.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|++++||||+++++ ++.+ ..++++||| .+++|.+++... ...+++.+++.|+.||+.||.|||++||+
T Consensus 57 ~E~~~l~~l~HpnIv~~~g-~~~~----~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~iv 131 (272)
T d1qpca_ 57 AEANLMKQLQHQRLVRLYA-VVTQ----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131 (272)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCEeEEEe-eecc----CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5566889999999999987 5532 235566666 699999988432 23589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++........
T Consensus 132 HrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~---------------------------------------------- 165 (272)
T d1qpca_ 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT---------------------------------------------- 165 (272)
T ss_dssp CSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE----------------------------------------------
T ss_pred cCccchhheeeecccceeeccccceEEccCCccc----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......||+.|+|||++.+..|+.++|||||||++||
T Consensus 166 -------------------------------------------~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~e 202 (272)
T d1qpca_ 166 -------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202 (272)
T ss_dssp -------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHH
Confidence 0011467999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc--CcCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLN 326 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~--hp~~~ 326 (712)
|+| |+.........+..+.....++......+...+|+.+||+.||++|||+.+|++ |+||+
T Consensus 203 llt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 998 555555555566666665544443344455669999999999999999999988 67764
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-36 Score=318.25 Aligned_cols=217 Identities=14% Similarity=0.125 Sum_probs=163.4
Q ss_pred eccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.+|..+|++++||||+++++ ++.... ....+|+++++.|++|.+++... .+++.+++.+++||+.||+|||++||
T Consensus 54 ~~Ei~il~~l~hp~iv~~~~-~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~i 130 (345)
T d1pmea_ 54 LREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANV 130 (345)
T ss_dssp HHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCCCcEEE-EEeeccccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36778899999999999988 554332 23468889999999999999543 39999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||||+|||++.++.+||+|||++.........
T Consensus 131 iHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~--------------------------------------------- 165 (345)
T d1pmea_ 131 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH--------------------------------------------- 165 (345)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB---------------------------------------------
T ss_pred cCCCCCcceEEECCCCCEEEcccCceeeccCCCcc---------------------------------------------
Confidence 99999999999999999999999988432111000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.......+||+.|+|||++... .++.++||||+||++
T Consensus 166 ------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il 203 (345)
T d1pmea_ 166 ------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 203 (345)
T ss_dssp ------------------------------------------CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHH
T ss_pred ------------------------------------------ceeeccccccceechHHHhhcCCCCCchhhhhccCcee
Confidence 0000115789999999998554 589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC-------------------------Cc----hhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PP----QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~-------------------------~~----~~~~~~~~~~~li~~~L~~dP 310 (712)
|||++ ||.................. +. .+....+...+|+.+||..||
T Consensus 204 ~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 283 (345)
T d1pmea_ 204 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP 283 (345)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSST
T ss_pred hHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCCh
Confidence 99998 77655433222221111000 00 111223456699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCch
Q 005147 311 SGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.+|||+.|+|+||||+....+.
T Consensus 284 ~~R~ta~e~L~hpf~~~~~~~~ 305 (345)
T d1pmea_ 284 HKRIEVEQALAHPYLEQYYDPS 305 (345)
T ss_dssp TTSCCHHHHHTSGGGTTTCCGG
T ss_pred hHCcCHHHHhcCHhhccCCCCc
Confidence 9999999999999999765543
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-35 Score=310.15 Aligned_cols=213 Identities=17% Similarity=0.217 Sum_probs=162.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|++++||||+++++ ++.+ ...+++++|++++++.+++ ......+++.+++.++.||+.||+|||++|||
T Consensus 49 ~~Ei~il~~l~Hp~Iv~~~~-~~~~---~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~Ii 124 (298)
T d1gz8a_ 49 IREISLLKELNHPNIVKLLD-VIHT---ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124 (298)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCcEEEecc-cccc---ccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 35777899999999999888 5532 4578999999888877766 44455699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+|++|||.++...... +
T Consensus 125 HrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~---------------------------------~-------------- 157 (298)
T d1gz8a_ 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------------------------R-------------- 157 (298)
T ss_dssp CSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------------------------B--------------
T ss_pred ccccCchheeecccCcceeccCCcceeccCCc---------------------------------c--------------
Confidence 99999999999999999999999884322110 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.... ++.++|||||||++|
T Consensus 158 -------------------------------------------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily 194 (298)
T d1gz8a_ 158 -------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194 (298)
T ss_dssp -------------------------------------------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------cceeecccceeeehhhhccccCCCccccccccchhhh
Confidence 001146899999999987766 589999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCC-----------------------c----hhhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLP-----------------------P----QLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~-----------------------~----~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||..................+ . ......+...+|+.+||++||++|
T Consensus 195 ~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R 274 (298)
T d1gz8a_ 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 274 (298)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTS
T ss_pred HHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHC
Confidence 9998 776544332222211100000 0 011122345599999999999999
Q ss_pred CCHHHHhcCcCCCCCcCch
Q 005147 314 PKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~~ 332 (712)
||+.|+|+||||++...+.
T Consensus 275 ~t~~ell~H~ff~~~~~p~ 293 (298)
T d1gz8a_ 275 ISAKAALAHPFFQDVTKPV 293 (298)
T ss_dssp CCHHHHHTSGGGTTCCCCC
T ss_pred cCHHHHhCCHhhccCCCCC
Confidence 9999999999999876653
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=310.81 Aligned_cols=200 Identities=13% Similarity=0.114 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|++++||||+++++ +++. ..++++||| .+++|.+++.+.. .+++.+++.|+.||+.||+|||++||||
T Consensus 57 ~E~~il~~l~HpnIv~~~g-~~~~----~~~~lvmE~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~~iiH 130 (277)
T d1xbba_ 57 AEANVMQQLDNPYIVRMIG-ICEA----ESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVH 130 (277)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEES----SSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCceEEE-Eecc----CCEEEEEEcCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhCCccc
Confidence 5566789999999999987 6633 246777887 5899999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||+++........
T Consensus 131 rDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~----------------------------------------------- 163 (277)
T d1xbba_ 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENY----------------------------------------------- 163 (277)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEECCTTCSE-----------------------------------------------
T ss_pred CCCcchhhcccccCcccccchhhhhhccccccc-----------------------------------------------
Confidence 999999999999999999999998543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........||+.|+|||.+.+..++.++|||||||++|||
T Consensus 164 ----------------------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~el 203 (277)
T d1xbba_ 164 ----------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203 (277)
T ss_dssp ----------------------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHH
Confidence 0000114689999999999998999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
++ ||..... ......+..+..++......+...+|+.+||+.||++|||+.+|+
T Consensus 204 lt~g~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~ 261 (277)
T d1xbba_ 204 FSYGQKPYRGMKG-SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 261 (277)
T ss_dssp HTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred hhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 87 5654433 344555555544444334445566999999999999999999984
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-36 Score=309.53 Aligned_cols=201 Identities=18% Similarity=0.253 Sum_probs=151.8
Q ss_pred eeccceeeccCC--CCCcccccccccccccccCceEEEEeeC--CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 25 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWG--DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 25 ~~~~~~~l~~~~--H~ni~~~~~~~~~~~~~~~~~~l~~e~~--g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
..++..+|+.++ ||||+++++ ++.+ .+.+++++|+. +++|.+++.+.. .+++.+++.|++||+.||+|||+
T Consensus 54 ~~~E~~il~~l~~~h~nIv~~~~-~~~~---~~~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~ 128 (273)
T d1xwsa_ 54 VPMEVVLLKKVSSGFSGVIRLLD-WFER---PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN 128 (273)
T ss_dssp EEHHHHHHHHHCSSSCSBCCEEE-EEEC---SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCccEEEE-EEee---CCeEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 345666777665 999999888 5533 23556666663 468888885443 49999999999999999999999
Q ss_pred cCceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+|||++.+ +.+|++|||++......
T Consensus 129 ~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~-------------------------------------------- 164 (273)
T d1xwsa_ 129 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------------------------------------------- 164 (273)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS--------------------------------------------
T ss_pred CCCccccCcccceEEecCCCeEEECccccceecccc--------------------------------------------
Confidence 999999999999999854 78999999988432111
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRL 258 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSl 258 (712)
......||+.|+|||++.+..+ +.++|||||
T Consensus 165 ------------------------------------------------~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSl 196 (273)
T d1xwsa_ 165 ------------------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196 (273)
T ss_dssp ------------------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHH
T ss_pred ------------------------------------------------cccccccCCCcCCHHHHcCCCCCCcccccccc
Confidence 0011468999999999987764 678999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|||++ ||.... ..... ...++. ...++..+||.+||+.||++|||++|+|+||||+....
T Consensus 197 Gvilyell~g~~Pf~~~~---~i~~~--~~~~~~---~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~ 263 (273)
T d1xwsa_ 197 GILLYDMVCGDIPFEHDE---EIIRG--QVFFRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263 (273)
T ss_dssp HHHHHHHHHSSCSCCSHH---HHHHC--CCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred eeeehhHhhCCCCCCCch---HHhhc--ccCCCC---CCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence 999999999 554322 22111 111221 23455669999999999999999999999999987643
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.3e-35 Score=309.08 Aligned_cols=206 Identities=14% Similarity=0.173 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|++++|||||++++ ++.. ...++++||| .|++|.+++......+++.+++.|++||+.||.|||++||+|
T Consensus 76 ~E~~~l~~l~HpnIv~l~g-~~~~---~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiH 151 (299)
T d1jpaa_ 76 SEASIMGQFDHPNVIHLEG-VVTK---STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 151 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCccEEE-EEee---CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 5667899999999999988 5532 3457777777 589999999776667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++......... +.
T Consensus 152 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~--------------------------------------------~~ 187 (299)
T d1jpaa_ 152 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--------------------------------------------TY 187 (299)
T ss_dssp SCCCGGGEEECTTCCEEECCC-----------------------------------------------------------
T ss_pred CccccceEEECCCCcEEECCcccceEccCCCCcc--------------------------------------------ee
Confidence 9999999999999999999999985432220000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......||+.|||||.+.+..|+.++|||||||++|||
T Consensus 188 -----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el 226 (299)
T d1jpaa_ 188 -----------------------------------------TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 226 (299)
T ss_dssp -------------------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eecccccCCccccCHHHHhcCCCCcccccccchHHHHHH
Confidence 000114578999999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+| ||..... ...+..+.....++......+...+|+.+||+.||.+|||+.||+++
T Consensus 227 ~t~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 227 MSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HTTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 97 5654433 34445555544444444444556699999999999999999999873
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-36 Score=315.88 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=155.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------CCCChh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------------------RSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------------------~~l~~~ 82 (712)
++..+|..+ +|||||++++ ++.+ ...++++||| .||+|.++|+... ..+++.
T Consensus 89 ~E~~~l~~l~~HpnIv~l~~-~~~~---~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 164 (325)
T d1rjba_ 89 SELKMMTQLGSHENIVNLLG-ACTL---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 164 (325)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHH
T ss_pred HHHHHHHHhcCCCcEeEEEE-EEee---CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHH
Confidence 344566666 8999999988 5533 3456777777 6999999995432 247899
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|+.||+.||+|||++|||||||||+||+++.++.+||+|||+++.......
T Consensus 165 ~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~------------------------- 219 (325)
T d1rjba_ 165 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------------------------- 219 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCc-------------------------
Confidence 9999999999999999999999999999999999999999999999853211100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
. .......||+.|||||
T Consensus 220 --------~-------------------------------------------------------~~~~~~~gt~~y~aPE 236 (325)
T d1rjba_ 220 --------Y-------------------------------------------------------VVRGNARLPVKWMAPE 236 (325)
T ss_dssp --------S-------------------------------------------------------EEETTEEECGGGCCHH
T ss_pred --------e-------------------------------------------------------eeeccccCCCccCChH
Confidence 0 0001146799999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
++.+..|+.++|||||||++|||++ ||............+.....++......+...+||.+||+.||++|||++|
T Consensus 237 ~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~e 316 (325)
T d1rjba_ 237 SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 316 (325)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 9999999999999999999999996 665444333334444444333333334455669999999999999999999
Q ss_pred HhcC
Q 005147 319 LLQS 322 (712)
Q Consensus 319 iL~h 322 (712)
|++|
T Consensus 317 i~~~ 320 (325)
T d1rjba_ 317 LTSF 320 (325)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-35 Score=314.10 Aligned_cols=209 Identities=15% Similarity=0.229 Sum_probs=161.2
Q ss_pred eccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.++..+|++++||||+++++ +|.... ....+|++||++|.+|..+++.. .+++..++.|++||+.||+|||++|
T Consensus 65 ~~Ei~il~~l~hpniv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ 141 (346)
T d1cm8a_ 65 YRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAG 141 (346)
T ss_dssp HHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCeeEEEE-EeccCccccccceEEEEEecccccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhCC
Confidence 36677899999999999988 554332 23468999999999999987543 3999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|||++.++.+|++|||+++.....
T Consensus 142 IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~----------------------------------------------- 174 (346)
T d1cm8a_ 142 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----------------------------------------------- 174 (346)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCSS-----------------------------------------------
T ss_pred CcccccCcchhhcccccccccccccceeccCCc-----------------------------------------------
Confidence 999999999999999999999999988432111
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvl 261 (712)
.....||++|+|||++.+.. ++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi 208 (346)
T d1cm8a_ 175 ----------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI 208 (346)
T ss_dssp ----------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------cccccccccccCHHHHcCCCCCCccchhhcchHH
Confidence 01146899999999997654 7999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc-cCC----------------------------CchhhhcCchhHHHHHHcCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH-RVL----------------------------PPQLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~-~~~----------------------------~~~~~~~~~~~~~li~~~L~~d 309 (712)
+|||++ ||............... ... ...+....+...+||.+||..|
T Consensus 209 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d 288 (346)
T d1cm8a_ 209 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD 288 (346)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred HHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCC
Confidence 999999 66554332222111110 000 0111223455569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.+|||+.|+|+||||+....
T Consensus 289 P~~R~ta~eiL~Hp~f~~~~~ 309 (346)
T d1cm8a_ 289 AEQRVTAGEALAHPYFESLHD 309 (346)
T ss_dssp TTTSCCHHHHHHSGGGTTTC-
T ss_pred hhHCcCHHHHhcChhhCcCCC
Confidence 999999999999999998654
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-35 Score=315.05 Aligned_cols=213 Identities=16% Similarity=0.197 Sum_probs=157.6
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
+|..+|++++||||+++++.++.... ....++++|||+++++.+.+. .....+++.+++.|++||+.||+|||++
T Consensus 62 ~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~ 141 (350)
T d1q5ka_ 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141 (350)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 56668999999999999884443322 334578899998777666552 3444599999999999999999999999
Q ss_pred CceeccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+|||++.++ .+||+|||++.......
T Consensus 142 ~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 177 (350)
T d1q5ka_ 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-------------------------------------------- 177 (350)
T ss_dssp TEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred CCcccCCCcceEEEecCCCceeEecccchhhccCCc--------------------------------------------
Confidence 999999999999999775 89999999884432110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
.....+|++.|+|||++.+. .|+.++||||||
T Consensus 178 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG 210 (350)
T d1q5ka_ 178 -----------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 210 (350)
T ss_dssp -----------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccccccccChHHhhcccCCCcceeecccc
Confidence 00114689999999998765 589999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhc------------------ccCCCc---------hhhhcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLR------------------HRVLPP---------QLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~------------------~~~~~~---------~~~~~~~~~~~li~~~L~~d 309 (712)
|++|||++ ||............+. ...++. ......+...+||.+||.+|
T Consensus 211 ~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d 290 (350)
T d1q5ka_ 211 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290 (350)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSS
T ss_pred eEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCC
Confidence 99999999 6655443322221111 000010 01122345669999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++|||+.|+|+||||++...
T Consensus 291 P~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 291 PTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp GGGSCCHHHHHTSGGGGGGGC
T ss_pred hhHCcCHHHHhcCHhhccccC
Confidence 999999999999999987644
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-35 Score=304.40 Aligned_cols=204 Identities=12% Similarity=0.129 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|++++|||||++++ ++.+ ...+++++|+ .+++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 58 ~E~~il~~l~H~nIv~~~g-~~~~---~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiH 133 (283)
T d1mqba_ 58 GEAGIMGQFSHHNIIRLEG-VISK---YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 133 (283)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhcCCCCEeeeeE-EEec---CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccccc
Confidence 5667899999999999888 5532 2345666666 688899988666566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........ .
T Consensus 134 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------~--------------- 167 (283)
T d1mqba_ 134 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------T--------------- 167 (283)
T ss_dssp SCCCGGGEEECTTCCEEECCCCC---------------------------------------------------------
T ss_pred CccccceEEECCCCeEEEcccchhhcccCCCcc-------------------------------c---------------
Confidence 999999999999999999999998543211000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 168 -----------------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el 206 (283)
T d1mqba_ 168 -----------------------------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 206 (283)
T ss_dssp -----------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHH
Confidence 000114579999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ |+.........+..+..+..++......+...+|+.+||+.||++|||+.+|++
T Consensus 207 ~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 207 MTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp HTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 98 555544555566666665555544444455669999999999999999999977
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-35 Score=307.15 Aligned_cols=217 Identities=14% Similarity=0.215 Sum_probs=159.0
Q ss_pred eccceeeccCCCCCccccccccccccc-----ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~-----~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
.+|..+|+.++|||++.+++ ++.... ..+.+++++|++++.+...+......+++.+++.|++||+.||.|||+
T Consensus 57 ~~E~~il~~l~h~nii~~~~-~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~ 135 (318)
T d3blha1 57 LREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 135 (318)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccceEe-eeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhcc
Confidence 36677899999999999888 433222 235789999998777776665666679999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
+||+||||||+|||++.++.+|++|||++...+.......
T Consensus 136 ~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------- 175 (318)
T d3blha1 136 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP---------------------------------------- 175 (318)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----C----------------------------------------
T ss_pred CCEEecCcCchheeecCCCcEEeeecceeeeccccccccc----------------------------------------
Confidence 9999999999999999999999999999855432210000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
......+||++|+|||++.+. .|+.++||||||
T Consensus 176 ----------------------------------------------~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlG 209 (318)
T d3blha1 176 ----------------------------------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG 209 (318)
T ss_dssp ----------------------------------------------CCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred ----------------------------------------------ccccceecCHHHhhHHHHcCCCCCCcHHHcccCC
Confidence 000114789999999999766 589999999999
Q ss_pred HHHHHhhC---CCCCChhhHHH--HHhhcccCCCch----------------------h------hhcCchhHHHHHHcC
Q 005147 260 VLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQ----------------------L------LLKFPKEASFCLWLL 306 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~--~~~~~~~~~~~~----------------------~------~~~~~~~~~li~~~L 306 (712)
|++|||++ ||.+....... +........+.. . ....+...+||.+||
T Consensus 210 vil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL 289 (318)
T d3blha1 210 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL 289 (318)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHS
T ss_pred ceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHC
Confidence 99999998 66544332221 111111111000 0 011344458999999
Q ss_pred CCCCCCCCCHHHHhcCcCCCCCc
Q 005147 307 HPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 307 ~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++||++|||++|+|+||||+..+
T Consensus 290 ~~dP~~R~sa~elL~Hpff~~~p 312 (318)
T d3blha1 290 VLDPAQRIDSDDALNHDFFWSDP 312 (318)
T ss_dssp CSSTTTSCCHHHHHHSGGGSSSS
T ss_pred cCChhHCcCHHHHHcChhhccCC
Confidence 99999999999999999999653
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.7e-35 Score=304.09 Aligned_cols=209 Identities=17% Similarity=0.219 Sum_probs=156.4
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..++..+|+.++||||+++++ .+. ....+++++++.++.+...+....+.+++.+++.|++||+.||+|||++|||
T Consensus 47 ~~~E~~il~~l~hpnIv~~~~-~~~---~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~Iv 122 (286)
T d1ob3a_ 47 TIREISILKELKHSNIVKLYD-VIH---TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122 (286)
T ss_dssp HHHHHHGGGGCCCTTBCCEEE-EEE---CSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCcEEeeee-ecc---cCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEE
Confidence 346777899999999999887 442 3356888898877677666655556699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+|++|||.+...+....
T Consensus 123 HrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~----------------------------------------------- 155 (286)
T d1ob3a_ 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------------------------------------- 155 (286)
T ss_dssp CSCCCGGGEEECTTSCEEECCTTHHHHHCC--------------------------------------------------
T ss_pred ecCCCCceeeEcCCCCEEecccccceecccCcc-----------------------------------------------
Confidence 999999999999999999999998843221100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~ 192 (286)
T d1ob3a_ 156 -------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFA 192 (286)
T ss_dssp -------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHH
Confidence 001146799999999997654 799999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc--cC---------------------CC---ch-hhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH--RV---------------------LP---PQ-LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~--~~---------------------~~---~~-~~~~~~~~~~li~~~L~~dP~~R 313 (712)
||++ ||............... .. .+ .. .....+...+||.+||++||++|
T Consensus 193 el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R 272 (286)
T d1ob3a_ 193 EMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272 (286)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHC
Confidence 9999 77654433222221110 00 00 00 11123445599999999999999
Q ss_pred CCHHHHhcCcCCCC
Q 005147 314 PKMGELLQSEFLNE 327 (712)
Q Consensus 314 pt~~eiL~hp~~~~ 327 (712)
||+.|+|+||||++
T Consensus 273 ~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 273 ITAKQALEHAYFKE 286 (286)
T ss_dssp CCHHHHHTSGGGGC
T ss_pred cCHHHHhcCcccCc
Confidence 99999999999974
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-35 Score=304.44 Aligned_cols=201 Identities=18% Similarity=0.177 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ..++++||+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 57 ~E~~~l~~l~HpnIv~l~~-~~~~----~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiH 131 (273)
T d1mp8a_ 57 QEALTMRQFDHPHIVKLIG-VITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131 (273)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS----SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec----CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeec
Confidence 4556789999999999988 5532 356677776 689999988665666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||+++........
T Consensus 132 rDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~----------------------------------------------- 164 (273)
T d1mp8a_ 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----------------------------------------------- 164 (273)
T ss_dssp SCCSGGGEEEEETTEEEECC------------------------------------------------------------
T ss_pred cccchhheeecCCCcEEEccchhheeccCCcce-----------------------------------------------
Confidence 999999999999999999999998543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..|+.++|||||||++|||
T Consensus 165 ------------------------------------------~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~ 202 (273)
T d1mp8a_ 165 ------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 202 (273)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eccceecCcccchhhHhccCCCCCccccccchHHHHHH
Confidence 00114579999999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||.... ....+..+..+..++......+...+||.+||..||.+|||+.||+++
T Consensus 203 lt~g~~P~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 203 LMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HTTSCCTTTTCC-GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 87 454333 334455555555444444445566699999999999999999999864
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-35 Score=310.13 Aligned_cols=230 Identities=16% Similarity=0.177 Sum_probs=167.7
Q ss_pred ccccccccccCCCCCcc----eeeeccceeeccCCCCCcccccccccccc---cccCceEEEEeeCCccHHHhhcCCCCC
Q 005147 6 LRGERFGVRGDDSNDFE----LRKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRS 78 (712)
Q Consensus 6 ~~~~~~~~~~~~~~~~~----~r~~~~~~~l~~~~H~ni~~~~~~~~~~~---~~~~~~~l~~e~~g~sL~~~l~~~~~~ 78 (712)
..|+.++++--...... -+..++..+|+.++|||++++++ ++... .....+++++++.|++|.+++... .
T Consensus 41 ~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~-~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~--~ 117 (348)
T d2gfsa1 41 KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--K 117 (348)
T ss_dssp TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHTTC--C
T ss_pred CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEE-EEeeccccccCceEEEEEeecCCchhhhcccc--c
Confidence 34666666644322211 13346777899999999999888 44332 233468889999999999999443 4
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+++.+++.|++||+.||+|||++||+||||||+|||++.++.+|++|||.+......
T Consensus 118 l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~----------------------- 174 (348)
T d2gfsa1 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----------------------- 174 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG-----------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc-----------------------
Confidence 999999999999999999999999999999999999999999999999987332110
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
.....|++.|
T Consensus 175 ----------------------------------------------------------------------~~~~~g~~~y 184 (348)
T d2gfsa1 175 ----------------------------------------------------------------------MTGYVATRWY 184 (348)
T ss_dssp ----------------------------------------------------------------------GSSSCHHHHT
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 0114689999
Q ss_pred cCcccccCCC-CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-------------------------
Q 005147 239 ASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP------------------------- 289 (712)
Q Consensus 239 ~aPE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~------------------------- 289 (712)
+|||++.+.. ++.++|||||||++|+|++ ||.+..........+.....+.
T Consensus 185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (348)
T d2gfsa1 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 264 (348)
T ss_dssp SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence 9999987765 6899999999999999999 6665443322222111111000
Q ss_pred ----hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 290 ----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 290 ----~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
......+...+||.+||..||++|||+.|+|+||||+....+
T Consensus 265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~ 310 (348)
T d2gfsa1 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310 (348)
T ss_dssp CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCC
Confidence 011234556699999999999999999999999999976543
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-35 Score=305.43 Aligned_cols=201 Identities=20% Similarity=0.243 Sum_probs=148.8
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHHHHH
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVE 93 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qil~ 93 (712)
++.+ ..|+||+.+++ ++. .....++++||+ .|++|.++|... ...+++.+++.|+.||+.
T Consensus 69 ~l~~~~~h~~iv~~~~-~~~--~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 145 (299)
T d1ywna1 69 ILIHIGHHLNVVNLLG-ACT--KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 145 (299)
T ss_dssp HHHHHCCCTTBCCEEE-EEC--STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCeEEEeee-eec--cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHH
Confidence 3444 46889988777 332 223456777776 699999999432 234889999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||.|||++|||||||||+||||+.++.+||+|||+++....... .
T Consensus 146 gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~---------------------------------~-- 190 (299)
T d1ywna1 146 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD---------------------------------Y-- 190 (299)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTT---------------------------------S--
T ss_pred HHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhcccccc---------------------------------c--
Confidence 99999999999999999999999999999999999854322100 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
.......||+.|+|||++.+..++.++
T Consensus 191 -----------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~s 217 (299)
T d1ywna1 191 -----------------------------------------------------VRKGDARLPLKWMAPETIFDRVYTIQS 217 (299)
T ss_dssp -----------------------------------------------------CCTTSCCCGGGGCCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------cccCceeeCccccchhHhhcCCCCccc
Confidence 000114689999999999999999999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||||||++|||++ ||............+..+..++......+...+|+.+||+.||.+|||+.||++|
T Consensus 218 DiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 218 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999997 5554444444555555555554444445666799999999999999999999986
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-35 Score=309.43 Aligned_cols=203 Identities=15% Similarity=0.112 Sum_probs=159.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.++||||+++++ ++.+ ...+++++++.+++|.+++......+++.+++.|+.||+.||+|||++|||||
T Consensus 60 ~E~~~l~~l~HpnIv~l~g-~~~~---~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHr 135 (317)
T d1xkka_ 60 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 135 (317)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEES---SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec---CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 5666889999999999988 5533 34566777778999999886666679999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||+++........
T Consensus 136 DlKp~NIll~~~~~~kl~DFGla~~~~~~~~~------------------------------------------------ 167 (317)
T d1xkka_ 136 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE------------------------------------------------ 167 (317)
T ss_dssp CCCGGGEEEEETTEEEECCCSHHHHTTTTCC-------------------------------------------------
T ss_pred cchhhcceeCCCCCeEeeccccceeccccccc------------------------------------------------
Confidence 99999999999999999999998543221000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......||+.|+|||++.++.|+.++|||||||++|||+
T Consensus 168 ----------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~ 207 (317)
T d1xkka_ 168 ----------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207 (317)
T ss_dssp -----------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHH
Confidence 0001146899999999999999999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
| ||... ........+..+..++......+...+|+.+||+.||.+|||+.+|++|
T Consensus 208 t~g~~p~~~~-~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 208 TFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp TTSCCTTTTS-CGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HCCCCCCCCC-CHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 7 44433 2333445555554444444445666799999999999999999999986
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-35 Score=302.33 Aligned_cols=209 Identities=13% Similarity=0.108 Sum_probs=159.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|||||++++ ++.+ +.++++||+ .+|+|..++.. ....+++.+++.|+.||+.||+|||++||+
T Consensus 61 ~E~~~l~~l~h~nIv~~~g-~~~~----~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~iv 135 (285)
T d1fmka3 61 QEAQVMKKLRHEKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 135 (285)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcccCCEeEEEE-EEec----CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhee
Confidence 4556789999999999988 5532 234555555 78999998833 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++........
T Consensus 136 H~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~---------------------------------------------- 169 (285)
T d1fmka3 136 HRDLRAANILVGENLVCKVADFGLARLIEDNEYT---------------------------------------------- 169 (285)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCTTC------------------------------------------------------
T ss_pred cccccceEEEECCCCcEEEcccchhhhccCCCce----------------------------------------------
Confidence 9999999999999999999999998543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 170 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~e 206 (285)
T d1fmka3 170 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 206 (285)
T ss_dssp -------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeccccccccccChHHHhCCCCCcHHhhhcchHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc--CcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~--hp~~~~~~ 329 (712)
|++ |+.........+..+.....++......+...+|+.+||+.||++|||+++|++ ++||+...
T Consensus 207 l~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~ 276 (285)
T d1fmka3 207 LTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 276 (285)
T ss_dssp HHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence 998 555555555555555555444443344455669999999999999999999988 88887654
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.9e-35 Score=301.67 Aligned_cols=211 Identities=18% Similarity=0.302 Sum_probs=154.7
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+++++.+..+......++++||+ .|++|.+++...+ .+++.+++.|++||+.||+|||++||+
T Consensus 55 ~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ii 133 (277)
T d1o6ya_ 55 RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGII 133 (277)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 35667899999999999998333333333457788887 5899999885544 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.++++|||.+.........
T Consensus 134 HrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------- 167 (277)
T d1o6ya_ 134 HRDVKPANIMISATNAVKVMDFGIARAIADSGNS---------------------------------------------- 167 (277)
T ss_dssp CCCCSGGGEEEETTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CccccCcccccCccccceeehhhhhhhhcccccc----------------------------------------------
Confidence 9999999999999999999999987432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.......+||+.|+|||++.+..|+.++|||||||++||
T Consensus 168 -----------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilye 206 (277)
T d1o6ya_ 168 -----------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 206 (277)
T ss_dssp ----------------------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccCcccccCHHHHcCCCCCcceecccchHHHHH
Confidence 000112579999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCch-hhhcC-chhHHHHHHcCCCCCCCCC-CHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKF-PKEASFCLWLLHPEPSGRP-KMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~li~~~L~~dP~~Rp-t~~eiL~hp~~ 325 (712)
|++ ||............+.....++. ..... +...+||.+||++||.+|| |++++ .|+|+
T Consensus 207 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~ 272 (277)
T d1o6ya_ 207 VLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV 272 (277)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred HHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence 999 77665555445555555444433 22333 4556999999999999999 56655 44543
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-35 Score=298.71 Aligned_cols=217 Identities=16% Similarity=0.118 Sum_probs=161.3
Q ss_pred cccccccccCCCCC--cceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChh
Q 005147 7 RGERFGVRGDDSND--FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVY 82 (712)
Q Consensus 7 ~~~~~~~~~~~~~~--~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~ 82 (712)
.|+.++++--.... ..|+ +|..+|+.++||||+++++ ++.+. ...+++++|| .+++|.++|.+. ...+++.
T Consensus 29 ~~~~vAvK~i~~~~~~~~~~--~E~~~l~~l~HpnIv~~~g-~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~ 103 (262)
T d1byga_ 29 RGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLLG-VIVEE--KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 103 (262)
T ss_dssp TTEEEEEEECCCCC--HHHH--HTHHHHTTCCCTTBCCEEE-EECCC----CCEEEECCCTTEEHHHHHHHHHHHHCCHH
T ss_pred CCeEEEEEEECcHHHHHHHH--HHHHHHHhCCCCCEeeEEE-EEEec--CCcEEEEEeccCCCCHHHHHHhcCCCCCCHH
Confidence 34555555443222 2232 5666899999999999988 44222 2346777776 699999999433 2348999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
.++.|+.||+.||.|||+++|+||||||+||+++.++.+|++|||+++.....
T Consensus 104 ~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~--------------------------- 156 (262)
T d1byga_ 104 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--------------------------- 156 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------
T ss_pred HHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCC---------------------------
Confidence 99999999999999999999999999999999999999999999988432111
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
.....+++.|+|||
T Consensus 157 ------------------------------------------------------------------~~~~~~~~~y~aPE 170 (262)
T d1byga_ 157 ------------------------------------------------------------------QDTGKLPVKWTAPE 170 (262)
T ss_dssp -----------------------------------------------------------------------CCTTTSCHH
T ss_pred ------------------------------------------------------------------CccccccccCCChH
Confidence 00135688999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
++.+..++.++|||||||++|||+| +++...........+..+..++......+...+||.+||..||.+|||+.++
T Consensus 171 ~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l 250 (262)
T d1byga_ 171 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 250 (262)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 9998899999999999999999997 3333333445555566655555555555667799999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 251 ~~ 252 (262)
T d1byga_ 251 RE 252 (262)
T ss_dssp HH
T ss_pred HH
Confidence 77
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-34 Score=293.58 Aligned_cols=202 Identities=16% Similarity=0.209 Sum_probs=160.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|| .+++|.+++......+++..++.|+.||+.||+|||++||+|
T Consensus 48 ~Ev~~~~~l~HpnIv~~~g-~~~~---~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH 123 (258)
T d1k2pa_ 48 EEAKVMMNLSHEKLVQLYG-VCTK---QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123 (258)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECC---SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHHHhcCCCceeeEEE-EEee---CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 4566888999999999988 6533 3467888887 589999998666666899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++........
T Consensus 124 ~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------- 156 (258)
T d1k2pa_ 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----------------------------------------------- 156 (258)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-----------------------------------------------
T ss_pred ccccceeEEEcCCCcEEECcchhheeccCCCce-----------------------------------------------
Confidence 999999999999999999999998543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..++.++|||||||++|||
T Consensus 157 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el 194 (258)
T d1k2pa_ 157 ------------------------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194 (258)
T ss_dssp ------------------------------------------CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhH
Confidence 00114679999999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+| ||..... ......+.....++......+...+|+.+||+.||++|||+++||+|
T Consensus 195 ~t~g~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 195 YSLGKMPYERFTN-SETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HTTSCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhcCCCCCCCCCH-HHHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 97 5654443 34555555554444333334456699999999999999999999986
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=6.7e-34 Score=300.51 Aligned_cols=206 Identities=14% Similarity=0.205 Sum_probs=151.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|..+ +||||+++++ ++... ....++++||+ .+++|..+. +.+++.+++.+++||+.||+|||++|||
T Consensus 78 ~Ei~il~~l~~hpnIv~~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~gIv 151 (328)
T d3bqca1 78 REIKILENLRGGPNIITLAD-IVKDP-VSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMGIM 151 (328)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECT-TTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhccCCCCCcEEEE-EEEec-CCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 455678887 5999999888 55433 33456666666 578887754 3499999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||+|||++.++ .+|++|||+++......
T Consensus 152 HrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~----------------------------------------------- 184 (328)
T d3bqca1 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------------------------------------- 184 (328)
T ss_dssp CCCCSGGGEEEETTTTEEEECCGGGCEECCTTC-----------------------------------------------
T ss_pred cccccccceEEcCCCCeeeecccccceeccCCC-----------------------------------------------
Confidence 999999999998655 68999999885432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
......||+.|+|||.+.+.. ++.++|||||||++
T Consensus 185 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l 220 (328)
T d3bqca1 185 --------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220 (328)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccCccccCcccccCCCCCCcccchhhhhhhh
Confidence 001146899999999988765 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---------------cC--------------------CCc-hhhhcCchhHHHHH
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---------------RV--------------------LPP-QLLLKFPKEASFCL 303 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---------------~~--------------------~~~-~~~~~~~~~~~li~ 303 (712)
|||++ ||............+.. .. .+. ......++..+||.
T Consensus 221 ~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~ 300 (328)
T d3bqca1 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 300 (328)
T ss_dssp HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHH
T ss_pred HHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHH
Confidence 99998 66554332221111100 00 000 11112344569999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+||.+||++|||++|+|+||||+...
T Consensus 301 ~mL~~dP~~R~ta~e~L~Hp~F~~v~ 326 (328)
T d3bqca1 301 KLLRYDHQSRLTAREAMEHPYFYTVV 326 (328)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred HHccCChhHCcCHHHHhcCcccCCCC
Confidence 99999999999999999999999754
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-34 Score=295.64 Aligned_cols=212 Identities=15% Similarity=0.140 Sum_probs=159.0
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+..+|..+|++++||||+.+++ ++.+ ...+++++++ .|++|..++... +.+++.+++.+++|++.||+|||++|
T Consensus 47 ~~~~E~~il~~l~h~niv~~~~-~~~~---~~~~~iv~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~lH~~~ 121 (292)
T d1unla_ 47 SALREICLLKELKHKNIVRLHD-VLHS---DKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN 121 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCcCCEEeecc-cccc---ccceeEEeeeccccccccccccc-cccchhHHHHHHHHHHHHHHHhhcCC
Confidence 4447778899999999999877 5533 3456667766 577777766444 45899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|||++.++.+|++|||.++........
T Consensus 122 IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 157 (292)
T d1unla_ 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-------------------------------------------- 157 (292)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC--------------------------------------------
T ss_pred EeeecccCcccccccCCceeeeecchhhcccCCCcc--------------------------------------------
Confidence 999999999999999999999999988544222000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvl 261 (712)
.....++++|+|||++.+.. ++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~i 191 (292)
T d1unla_ 158 ----------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191 (292)
T ss_dssp ----------------------------------------------CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ceeeccccchhhhhHhccCCCCCchhhccccchH
Confidence 00134688999999998766 6999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCC----------------------------chhhhcCchhHHHHHHcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLP----------------------------PQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~L~~dP 310 (712)
+|||++ ||+........+..+.....+ .......+...+|+.+||++||
T Consensus 192 l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP 271 (292)
T d1unla_ 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP 271 (292)
T ss_dssp HHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSG
T ss_pred HHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCCh
Confidence 999998 665554444443332211000 0011122344589999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+|||++|+|+||||++...
T Consensus 272 ~~R~sa~e~L~Hp~f~~~~~ 291 (292)
T d1unla_ 272 VQRISAEEALQHPYFSDFCP 291 (292)
T ss_dssp GGSCCHHHHTTSGGGSSCSC
T ss_pred hHCcCHHHHhcChhhcCCCC
Confidence 99999999999999987654
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-33 Score=301.53 Aligned_cols=211 Identities=18% Similarity=0.213 Sum_probs=154.9
Q ss_pred eeccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
..++..+|++++||||+++++ ++.... ....+|+++|+++++|.+.+. ..+++.+++.+++||+.||+|||++
T Consensus 63 ~~~Ei~il~~l~hpnIv~~~~-~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~~ 138 (355)
T d2b1pa1 63 AYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_dssp HHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCeeEEEE-EEecccccccCceeEEEEeccchHHHHhhh---cCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 446777899999999999988 443332 346889999998777777663 3489999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+|||++.++.++++|||.++......
T Consensus 139 giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~--------------------------------------------- 173 (355)
T d2b1pa1 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------- 173 (355)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------------------------------
T ss_pred ccccccCCccccccccccceeeechhhhhcccccc---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++||||+||+
T Consensus 174 ----------------------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~ 207 (355)
T d2b1pa1 174 ----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 207 (355)
T ss_dssp -----------------------------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccccChhhhcCCCCCCCcccccccch
Confidence 0011468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc---------------------cCC-----------Cc--------hhhhcCchh
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH---------------------RVL-----------PP--------QLLLKFPKE 298 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~---------------------~~~-----------~~--------~~~~~~~~~ 298 (712)
+|+|++ ||............+.. ... +. ......+..
T Consensus 208 l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 287 (355)
T d2b1pa1 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 287 (355)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHH
Confidence 999998 56544332221111100 000 00 001112344
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+||.+||..||++|||++|+|+||||+....
T Consensus 288 ~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~ 319 (355)
T d2b1pa1 288 RDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319 (355)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence 58999999999999999999999999997544
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-34 Score=293.63 Aligned_cols=202 Identities=16% Similarity=0.097 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+. .+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~Ei~~l~~l~H~nIv~~~g-~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiH 134 (273)
T d1u46a_ 60 REVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134 (273)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeec----chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEee
Confidence 4556799999999999988 55432 34555555 689999988555556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||+++......-.
T Consensus 135 rDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~----------------------------------------------- 167 (273)
T d1u46a_ 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----------------------------------------------- 167 (273)
T ss_dssp SCCCGGGEEEEETTEEEECCCTTCEECCC-CCE-----------------------------------------------
T ss_pred eeecHHHhccccccceeeccchhhhhcccCCCc-----------------------------------------------
Confidence 999999999999999999999998654222000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........|+.+|+|||.+.+..++.++|||||||++|||
T Consensus 168 ----------------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~em 207 (273)
T d1u46a_ 168 ----------------------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207 (273)
T ss_dssp ----------------------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHH
Confidence 0000114578899999999998999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhh-cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+ .....++......+...+||.+||..||++|||+.+|++
T Consensus 208 lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 208 FTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCcCHH-HHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 97 66544443 333343 344444443344456669999999999999999999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-33 Score=294.81 Aligned_cols=207 Identities=15% Similarity=0.134 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ....+++++|+ .+++|.+++......+++.+++.++.||+.||.|||+.||+|
T Consensus 77 ~E~~~l~~l~HpnIv~~~g-~~~~--~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiH 153 (311)
T d1r0pa_ 77 TEGIIMKDFSHPNVLSLLG-ICLR--SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 153 (311)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EEEE--TTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeEEeE-EEEe--cCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCccc
Confidence 5556889999999999988 4322 22345666666 689999999777667889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........
T Consensus 154 rDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~----------------------------------------------- 186 (311)
T d1r0pa_ 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFD----------------------------------------------- 186 (311)
T ss_dssp SCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC-----------------------------------------------
T ss_pred CCccHHhEeECCCCCEEEecccchhhccccccc-----------------------------------------------
Confidence 999999999999999999999998653221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.........||+.|+|||.+.+..++.++|||||||++|||
T Consensus 187 ---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El 227 (311)
T d1r0pa_ 187 ---------------------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227 (311)
T ss_dssp ---------------------------------------CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHH
Confidence 00000114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||............+..+..+.......+...+|+.+||+.||++|||+.||++|
T Consensus 228 ~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 228 MTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 98 6655544444444455554444433344566699999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.1e-33 Score=296.08 Aligned_cols=201 Identities=15% Similarity=0.129 Sum_probs=159.9
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~ 89 (712)
++..+|..+ +||||+++++ ++.+ ...+++++|| .|++|.++|... ...+++.+++++++
T Consensus 59 ~E~~~l~~l~~HpnIv~~~~-~~~~---~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 134 (309)
T d1fvra_ 59 GELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 134 (309)
T ss_dssp HHHHHHTTCCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEeeEEE-EEec---CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHH
Confidence 556678887 7999999988 5532 3457777777 689999999543 35689999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 135 qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~--------------------------------- 181 (309)
T d1fvra_ 135 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------------------------------- 181 (309)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---------------------------------
T ss_pred HHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999884321100
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
......||..|+|||.+.+..|
T Consensus 182 ----------------------------------------------------------~~~~~~gt~~y~aPE~l~~~~~ 203 (309)
T d1fvra_ 182 ----------------------------------------------------------KKTMGRLPVRWMAIESLNYSVY 203 (309)
T ss_dssp ----------------------------------------------------------CC----CCTTTCCHHHHHHCEE
T ss_pred ----------------------------------------------------------cccceecCCcccchHHhccCCC
Confidence 0001357999999999999999
Q ss_pred CCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|||++ |++........+..+..+..++......+...+||.+||+.||++|||+.+|+++
T Consensus 204 ~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 204 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999998 3344445556666666665555544555667799999999999999999999874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=1.7e-33 Score=293.59 Aligned_cols=203 Identities=15% Similarity=0.107 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------CCCCChh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------------~~~l~~~ 82 (712)
++..+|++++||||+.+++ ++.. ...+++++++ .+++|.++|... ...+++.
T Consensus 65 ~E~~il~~l~h~niv~~~~-~~~~---~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (301)
T d1lufa_ 65 REAALMAEFDNPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 140 (301)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHH
T ss_pred HHHHHHHhcCCCCccccee-eecc---CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHH
Confidence 5666899999999999888 5532 2345666666 699999998422 1237889
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|++||+.||+|||++|||||||||+||||+.++.+||+|||+++.......
T Consensus 141 ~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~------------------------- 195 (301)
T d1lufa_ 141 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 195 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-------------------------
T ss_pred HHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCcc-------------------------
Confidence 9999999999999999999999999999999999999999999998843211100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
. .......|++.|+|||
T Consensus 196 --------~-------------------------------------------------------~~~~~~~~~~~y~aPE 212 (301)
T d1lufa_ 196 --------Y-------------------------------------------------------KADGNDAIPIRWMPPE 212 (301)
T ss_dssp --------B-------------------------------------------------------C----CCBCGGGCCHH
T ss_pred --------c-------------------------------------------------------cccCCCCcCcCcCCHH
Confidence 0 0001146789999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
.+.+..|+.++|||||||++|||++ |++........+..+..+..++......+...+|+.+||+.+|++|||+.||
T Consensus 213 ~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev 292 (301)
T d1lufa_ 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 292 (301)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 9999999999999999999999998 3333444445566666666655544555667799999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 293 ~~ 294 (301)
T d1lufa_ 293 HR 294 (301)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.7e-33 Score=295.88 Aligned_cols=208 Identities=19% Similarity=0.233 Sum_probs=155.0
Q ss_pred ccceeeccCCC-CCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|+.++| |||+++++ ++++. ..+++++|+ .|++|.+++...+ .+++..++.+++||+.||+|||++|||
T Consensus 77 ~E~~il~~l~h~pnIv~~~~-~~~~~---~~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~~iv 151 (322)
T d1vzoa_ 77 TERQVLEHIRQSPFLVTLHY-AFQTE---TKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGII 151 (322)
T ss_dssp CHHHHHHHHHTCTTBCCEEE-EEEET---TEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccCCCeEEEeee-eeccC---CceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 56667888878 78999877 55332 345666666 6999999995443 378999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.+|.+||+|||+++.+......
T Consensus 152 HrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~---------------------------------------------- 185 (322)
T d1vzoa_ 152 YRDIKLENILLDSNGHVVLTDFGLSKEFVADETE---------------------------------------------- 185 (322)
T ss_dssp CCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG----------------------------------------------
T ss_pred eccCCccceeecCCCCEEEeeccchhhhcccccc----------------------------------------------
Confidence 9999999999999999999999988543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+.. ++.++|||||||+|
T Consensus 186 -------------------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iL 222 (322)
T d1vzoa_ 186 -------------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 222 (322)
T ss_dssp -------------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccccccchhHHhhcCCcCCCchhhhHHHHHHH
Confidence 001146899999999997654 78899999999999
Q ss_pred HHhhC---CCCCChhh---HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|||++ ||...... ........ ...++......+...+||.+||.+||.+|| |++|+|+||||+...
T Consensus 223 yelltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~ 299 (322)
T d1vzoa_ 223 YELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299 (322)
T ss_dssp HHHHHSSCTTSCTTSCCCHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcc-cCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence 99999 77544321 11111111 112222233455666999999999999999 589999999998753
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.3e-33 Score=290.12 Aligned_cols=202 Identities=16% Similarity=0.140 Sum_probs=155.0
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+...+.++ +||||+.+++ ++.+ ...++++||+ .+|+|.++|.... ..+++.+++.+++|
T Consensus 68 e~~~l~~~~~HpnIv~~~~-~~~~---~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 143 (299)
T d1fgka_ 68 EMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 143 (299)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEeccc-cccc---CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHH
Confidence 34445555 8999999888 6643 2345666666 6999999994332 35899999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++|||||||||+|||++.++.+|++|||+++........
T Consensus 144 i~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~-------------------------------- 191 (299)
T d1fgka_ 144 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------------------------- 191 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT--------------------------------
T ss_pred HHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccc--------------------------------
Confidence 999999999999999999999999999999999999988543111000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
.......|++.|+|||.+.+..|+
T Consensus 192 --------------------------------------------------------~~~~~~~~~~~y~aPE~l~~~~y~ 215 (299)
T d1fgka_ 192 --------------------------------------------------------KKTTNGRLPVKWMAPEALFDRIYT 215 (299)
T ss_dssp --------------------------------------------------------CCCTTSCCGGGGSCHHHHHHCCCC
T ss_pred --------------------------------------------------------cccccCCCChhhhhhhHhcCCCCC
Confidence 000114678999999999999999
Q ss_pred CccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ +++...........+..+..++......+...+||.+||+.||++|||+.||++
T Consensus 216 ~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 99999999999999997 333333334455555555555444444556679999999999999999999987
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.7e-32 Score=285.64 Aligned_cols=203 Identities=15% Similarity=0.160 Sum_probs=152.8
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------CCCCChhHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------KRSVDVYECLHI 87 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------~~~l~~~~~~~i 87 (712)
++..+++.+ +||||+++++ ++.+ ...++++||+ .+++|.++|... ...+++.+++.|
T Consensus 75 ~E~~~~~~l~~HpnIv~~~g-~~~~---~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 150 (311)
T d1t46a_ 75 SELKVLSYLGNHMNIVNLLG-ACTI---GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150 (311)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEE-EEee---CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHH
Confidence 344556666 7999999888 5532 3456777777 599999998432 224889999999
Q ss_pred HHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcc
Q 005147 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (712)
Q Consensus 88 ~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (712)
+.||+.||.|||++|||||||||+||+++.++.++++|||.++.......
T Consensus 151 ~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~------------------------------ 200 (311)
T d1t46a_ 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN------------------------------ 200 (311)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT------------------------------
T ss_pred HHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCc------------------------------
Confidence 99999999999999999999999999999999999999999864322100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC
Q 005147 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (712)
Q Consensus 168 ~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (712)
+ .......||+.|+|||.+.+.
T Consensus 201 ---~-------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~ 222 (311)
T d1t46a_ 201 ---Y-------------------------------------------------------VVKGNARLPVKWMAPESIFNC 222 (311)
T ss_dssp ---S-------------------------------------------------------EECSSSEECGGGCCHHHHHHC
T ss_pred ---c-------------------------------------------------------eEeeecccChHHcCHHHhcCC
Confidence 0 000114689999999999999
Q ss_pred CCCCccchHHHHHHHHHhhC---CCCCC-hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 248 PVSCASDIYRLGVLLFELFC---PFSTG-EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~---pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++.++|||||||++|||+| |++.. .........+..+..+.......+...+||.+||+.||.+|||+.+|++
T Consensus 223 ~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999999998 44333 3323333333344333333333455569999999999999999999987
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-32 Score=286.35 Aligned_cols=227 Identities=13% Similarity=0.113 Sum_probs=154.7
Q ss_pred cccccccccCCCC-CcceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHH
Q 005147 7 RGERFGVRGDDSN-DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYEC 84 (712)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~ 84 (712)
+|+.++++--... ...+..+.+...+..++||||+++++..+........++++|||+ +++|.++|++. .+++.++
T Consensus 25 ~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~ 102 (303)
T d1vjya_ 25 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGM 102 (303)
T ss_dssp TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHH
T ss_pred CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC--CCCHHHH
Confidence 4555665533221 122334456666778999999998883333333444678888884 89999999654 3899999
Q ss_pred HHHHHHHHHHHHHhhh--------cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCC
Q 005147 85 LHIFRQIVEIVYAAHS--------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs--------~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (712)
+.++.|++.||+|+|+ +|||||||||+||||+.++.+||+|||+++........
T Consensus 103 ~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~------------------ 164 (303)
T d1vjya_ 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT------------------ 164 (303)
T ss_dssp HHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE------------------
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc------------------
Confidence 9999999999999997 59999999999999999999999999988543111000
Q ss_pred chhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCc
Q 005147 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (712)
Q Consensus 157 ~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (712)
........+||+
T Consensus 165 --------------------------------------------------------------------~~~~~~~~~gt~ 176 (303)
T d1vjya_ 165 --------------------------------------------------------------------IDIAPNHRVGTK 176 (303)
T ss_dssp --------------------------------------------------------------------ECC----CCSCG
T ss_pred --------------------------------------------------------------------eeccccceeccc
Confidence 000011257999
Q ss_pred cccCcccccCCC------CCCccchHHHHHHHHHhhC---CCCCC--------------hhhHHHHHhhcccCCCchhhh
Q 005147 237 WYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTG--------------EEKTRTMSSLRHRVLPPQLLL 293 (712)
Q Consensus 237 ~Y~aPE~~~~~~------~~~~sDIwSlGvll~eLl~---pf~~~--------------~~~~~~~~~~~~~~~~~~~~~ 293 (712)
.|+|||++.+.. ++.++|||||||+||||+| ||... ................+.++.
T Consensus 177 ~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 256 (303)
T d1vjya_ 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN 256 (303)
T ss_dssp GGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred CcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCc
Confidence 999999987643 5779999999999999998 22110 011111111222222111111
Q ss_pred cC------chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 294 KF------PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 294 ~~------~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.+ ....+|+.+||+.||++|||+.||++
T Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 257 RWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 11 12448999999999999999999977
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.5e-32 Score=280.97 Aligned_cols=203 Identities=13% Similarity=0.076 Sum_probs=156.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---------CCCCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------PKRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---------~~~~l~~~~~~~i~~qil~~l~ 96 (712)
++..++++++||||+++++ ++.. ...+++++|+ .+++|.+++.. .-..+++..+..|+.||+.||.
T Consensus 72 ~E~~il~~l~h~nIv~~~~-~~~~---~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~ 147 (308)
T d1p4oa_ 72 NEASVMKEFNCHHVVRLLG-VVSQ---GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 147 (308)
T ss_dssp HHHHHGGGCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEeeeee-EEec---CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHH
Confidence 5667899999999999888 5532 3356666666 69999998832 1123688899999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+++|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~--------------------------------------- 188 (308)
T d1p4oa_ 148 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY--------------------------------------- 188 (308)
T ss_dssp HHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC---------------------------------------
T ss_pred HHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcc---------------------------------------
Confidence 99999999999999999999999999999999853211100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
........|++.|+|||.+.+..++.++|||
T Consensus 189 -------------------------------------------------~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~ 219 (308)
T d1p4oa_ 189 -------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 219 (308)
T ss_dssp -------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred -------------------------------------------------eeeccceecccccCCHHHHccCCCCcccccc
Confidence 0001114689999999999999999999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ++............+..+..++......+...+++.+||+.+|.+|||+.+|++
T Consensus 220 S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 220 SFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp HHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999997 333344444555555555554444444456679999999999999999999998
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=8.4e-32 Score=280.48 Aligned_cols=212 Identities=17% Similarity=0.131 Sum_probs=151.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.+.|+|++..+..++ .....++++||++|++|.+.+....+.+++.+++.++.||+.||+|||++|||||
T Consensus 51 ~E~~i~~~l~~~~~i~~~~~~~---~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHr 127 (299)
T d1ckia_ 51 IESKIYKMMQGGVGIPTIRWCG---AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 127 (299)
T ss_dssp HHHHHHHHSTTSTTCCCEEEEE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHHccCCCcccEEEEEE---ecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3455788888888877766333 3345788999999999988886666679999999999999999999999999999
Q ss_pred cCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+|||++. +..++++|||+++..........
T Consensus 128 DiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~------------------------------------------- 164 (299)
T d1ckia_ 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------- 164 (299)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB-------------------------------------------
T ss_pred cCCHhhccccccCCCceeeeeccCcceeccccccccc-------------------------------------------
Confidence 99999999863 45699999999865422210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
..........||+.|||||.+.+..++.++|||||||++|
T Consensus 165 ----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~ 204 (299)
T d1ckia_ 165 ----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 204 (299)
T ss_dssp ----------------------------------------CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHH
Confidence 0000011257999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHH--hhc-c--cCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCHHHH---hcCcC
Q 005147 264 ELFC---PFSTGEEKTRTMS--SLR-H--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGEL---LQSEF 324 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~--~~~-~--~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~ei---L~hp~ 324 (712)
||++ ||........... ... . ...++......| ...+|+.+||..+|.+||++.++ |+|+|
T Consensus 205 el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 205 YFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp HHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 9999 6654332211111 111 1 111222333344 45599999999999999998755 45544
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.96 E-value=1.6e-30 Score=269.73 Aligned_cols=225 Identities=15% Similarity=0.146 Sum_probs=155.5
Q ss_pred cccccccccC--CCCCcceeeeccceeeccCCC-CCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhH
Q 005147 7 RGERFGVRGD--DSNDFELRKHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 83 (712)
Q Consensus 7 ~~~~~~~~~~--~~~~~~~r~~~~~~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~ 83 (712)
.|+.++++-. ......++.+ ..+++.+.| +|++.+++ ++ .....++++||++|++|.+++...+..++..+
T Consensus 29 ~~~~vAvK~~~~~~~~~~~~~e--~~~~~~l~~~~~i~~~~~-~~---~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~ 102 (293)
T d1csna_ 29 NNQQVAIKFEPRRSDAPQLRDE--YRTYKLLAGCTGIPNVYY-FG---QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT 102 (293)
T ss_dssp TTEEEEEEEEECCTTSCCHHHH--HHHHHHTTTCTTCCCEEE-EE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHH
T ss_pred CCCEEEEEEEccccCcHHHHHH--HHHHHHhcCCCCCCEEEE-Ee---ecCCccEEEEEecCCCHHHHHHhhccchhhHH
Confidence 3555655421 2222333333 234555555 67766665 33 34457899999999999999976666799999
Q ss_pred HHHHHHHHHHHHHHhhhcCceeccCCCCceeecC-----CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS-----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~-----~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+..|+.|++.||+|||++||+||||||+|||++. .+.++++|||+++..........
T Consensus 103 ~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~------------------ 164 (293)
T d1csna_ 103 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------ 164 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------
T ss_pred HHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccc------------------
Confidence 9999999999999999999999999999999973 57899999999865422200000
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCc-ccccccccCcc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP-MKQILLMETNW 237 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~gt~~ 237 (712)
.+ ......+||+.
T Consensus 165 ------------------------------------------------------------------~~~~~~~~~~GT~~ 178 (293)
T d1csna_ 165 ------------------------------------------------------------------IPYREKKNLSGTAR 178 (293)
T ss_dssp ------------------------------------------------------------------CCCCCCCCCCSCTT
T ss_pred ------------------------------------------------------------------eeecccCceEEchh
Confidence 00 00112579999
Q ss_pred ccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChh--hHHHHHhh---cccCCCchhhhcCc-hhHHHHHHcCCC
Q 005147 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE--KTRTMSSL---RHRVLPPQLLLKFP-KEASFCLWLLHP 308 (712)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~--~~~~~~~~---~~~~~~~~~~~~~~-~~~~li~~~L~~ 308 (712)
|||||++.+..++.++|||||||++|||++ ||..... .......+ .....+..+....| ...+++..|+..
T Consensus 179 y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~ 258 (293)
T d1csna_ 179 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL 258 (293)
T ss_dssp TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred hcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999998 6643221 11111111 11222223333333 455899999999
Q ss_pred CCCCCCCHHHHhc
Q 005147 309 EPSGRPKMGELLQ 321 (712)
Q Consensus 309 dP~~Rpt~~eiL~ 321 (712)
+|.+||+++.+.+
T Consensus 259 ~~~~rP~y~~l~~ 271 (293)
T d1csna_ 259 AFDATPDYDYLQG 271 (293)
T ss_dssp CTTCCCCHHHHHH
T ss_pred CcccCcCHHHHHH
Confidence 9999999776543
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2e-29 Score=269.61 Aligned_cols=201 Identities=19% Similarity=0.248 Sum_probs=136.4
Q ss_pred CCCCCcccccccccccccccC-ceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCC
Q 005147 35 GDHLRNQGGLSGVCENEAAID-PFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPS 111 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~-~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~ 111 (712)
++|+||+++++ ++....... .+++.++..++...... ......+++..++.+++||+.||+|||+ +||+||||||+
T Consensus 77 ~~~~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~ 155 (362)
T d1q8ya_ 77 MGANHILKLLD-HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155 (362)
T ss_dssp HHHTTBCCCCE-EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred cCcCceEEEEE-EeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChh
Confidence 46788999887 433222222 23333333444444433 4445568999999999999999999998 89999999999
Q ss_pred ceeecCCCc------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 112 CFVMSSFNH------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 112 NIll~~~~~------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||+..+. ++++|||.+......
T Consensus 156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-------------------------------------------------- 185 (362)
T d1q8ya_ 156 NVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------------------------- 185 (362)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------------------------
T ss_pred HeeeeccCcccccceeeEeecccccccccc--------------------------------------------------
Confidence 999986553 888888876321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
....+||+.|+|||++.+..|+.++|||||||++++|
T Consensus 186 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 222 (362)
T d1q8ya_ 186 -------------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL 222 (362)
T ss_dssp -------------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccccccChhhccccCCCccccccchHHHHHHH
Confidence 0114689999999999999999999999999999999
Q ss_pred hC---CCCCChhh------HHHHHhhc-ccCCCch---------------------------------------hhhcCc
Q 005147 266 FC---PFSTGEEK------TRTMSSLR-HRVLPPQ---------------------------------------LLLKFP 296 (712)
Q Consensus 266 l~---pf~~~~~~------~~~~~~~~-~~~~~~~---------------------------------------~~~~~~ 296 (712)
++ ||.+.... ......+. .+..+.. .....+
T Consensus 223 ~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (362)
T d1q8ya_ 223 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK 302 (362)
T ss_dssp HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHH
T ss_pred HHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCH
Confidence 98 55433211 00000000 0000000 011123
Q ss_pred hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 297 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 297 ~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
...+||.+||.+||.+|||++|+|+||||++..
T Consensus 303 ~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~ 335 (362)
T d1q8ya_ 303 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 335 (362)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence 445899999999999999999999999999653
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.88 E-value=1.5e-21 Score=203.21 Aligned_cols=200 Identities=14% Similarity=0.157 Sum_probs=159.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCC--cEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSK--LRV 555 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~--~~v 555 (712)
.+.+|...++++.|+|||..+++...+. .......+.+|.+.+..+.| + .++. +.+.+.+. ...
T Consensus 53 ~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~-s--~d~~~l~~~~~~~~~~~~ 129 (311)
T d1nr0a1 53 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW-D--SESKRIAAVGEGRERFGH 129 (311)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE-C--TTSCEEEEEECCSSCSEE
T ss_pred EEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccc-c--cccccccccccccccccc
Confidence 3467888999999999999775443322 12233568899999999999 3 3444 33333322 234
Q ss_pred EEEccCCce----ecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 556 KADLNQGDL----LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 556 ~~dl~~~~~----~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
+|++.+++. .+|.+.|.+++|+|+++ .|++|+.|+.|++||+++. ........|...|+++.|+| ++
T Consensus 130 v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~v~~~p-~~ 201 (311)
T d1nr0a1 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNP-DG 201 (311)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECT-TS
T ss_pred ccccccccccccccccccccccccccccceeeeccccccccccccccccc-------ccccccccccccccccccCc-cc
Confidence 588876553 46899999999999988 5889999999999999752 22344557889999999999 69
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEec-------cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMR-------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~-------~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|++|+.||.|++||++++..+.++. +|.+.|++++|+| ++++|++||.|++|+|||+++++++.++.
T Consensus 202 ~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~ 277 (311)
T d1nr0a1 202 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIP 277 (311)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccCC-CCCEEEEEeCCCeEEEEECCCCcEEEEEE
Confidence 999999999999999999998888764 6889999999998 89999999999999999999999887764
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.85 E-value=4.7e-21 Score=198.35 Aligned_cols=126 Identities=17% Similarity=0.271 Sum_probs=109.3
Q ss_pred EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE
Q 005147 557 ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632 (712)
Q Consensus 557 ~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 632 (712)
|+++++.+. +|.+.|++++|+|++++|++|+.|+.|++||++.... ........+...|++++|+| ++.+
T Consensus 211 ~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~s~-~~~~ 284 (340)
T d1tbga_ 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-----LMTYSHDNIICGITSVSFSK-SGRL 284 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----EEEECCTTCCSCEEEEEECS-SSCE
T ss_pred EECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc-----ccccccccccCceEEEEECC-CCCE
Confidence 777766543 5899999999999999999999999999999975211 11122235667799999999 6999
Q ss_pred EEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 633 IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 633 lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
|++|+.||.|+|||+.+++++.++.+|.++|++|+|+| ++.+|+|||.||+|+|||
T Consensus 285 l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~-d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEccCCEEEEeC
Confidence 99999999999999999999999999999999999998 999999999999999997
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.83 E-value=5e-20 Score=195.93 Aligned_cols=198 Identities=13% Similarity=0.102 Sum_probs=154.3
Q ss_pred cccccccCCCCCCCCccccCCC----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce-
Q 005147 496 LVRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL- 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~- 564 (712)
-++|.+|||||+.+++...+.. ......++||.++|..+.| ++. ...+...+.+....+|++..+..
T Consensus 9 pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~f-sp~-~~~l~s~s~D~~i~vWd~~~~~~~ 86 (371)
T d1k8kc_ 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW-APD-SNRIVTCGTDRNAYVWTLKGRTWK 86 (371)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE-ETT-TTEEEEEETTSCEEEEEEETTEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEE-CCC-CCEEEEEECCCeEEEEeecccccc
Confidence 4789999999987644432221 1234568899999999999 442 23444444544445599986542
Q ss_pred -----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC
Q 005147 565 -----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 565 -----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D 639 (712)
.+|...|.+++|+|+++.|++|+.|++|++|++..... ..........|...|.+++|+| ++.+|++|+.|
T Consensus 87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~---~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~D 162 (371)
T d1k8kc_ 87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND---WWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCD 162 (371)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT---EEEEEEECTTCCSCEEEEEECT-TSSEEEEEETT
T ss_pred cccccccccccccccccccccccceeecccCcceeeeeecccc---cccccccccccccccccccccc-cccceeccccC
Confidence 36789999999999999999999999999999865211 1112233456889999999999 69999999999
Q ss_pred CcEEEEECCC------------------CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 640 GVVQVWDVSR------------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 g~V~lwD~~~------------------~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|+|++||... ++.+....+|...|.+++|+| ++++|++|+.|++|++||+.++..+..+.
T Consensus 163 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 163 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred cEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeec-ccccccccccCCcceEEeeecccceeeee
Confidence 9999999864 246777889999999999998 89999999999999999999998887654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=1.6e-19 Score=183.65 Aligned_cols=197 Identities=15% Similarity=0.162 Sum_probs=145.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCC---------------------
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPF--------------------- 540 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~--------------------- 540 (712)
+.||...|+++.|+|+|..++....+. .......+++|.+.+..+.| ++.
T Consensus 13 L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 91 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGF 91 (317)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE-CTTSSEEEEEETTSCCCEEETTSS
T ss_pred EcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEee-eccccccccccccccccccccccc
Confidence 457778888888888887654433322 12344566777777766665 211
Q ss_pred -------------------CCCcEEEEEcCCcE-EEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 541 -------------------LEGLCKYLSFSKLR-VKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 541 -------------------~~~~~~~~~~~~~~-v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
.++...+....++. .+|+++++.. .+|...+.+++|++++.+|++|+.|+.|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~ 171 (317)
T d1vyhc1 92 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171 (317)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEe
Confidence 11222222233333 4488887653 36899999999999999999999999999999
Q ss_pred cCCcccc-----Cc--------------------------------------------------ccccceEEecCCCCeE
Q 005147 597 CDAIINE-----NR--------------------------------------------------DIHYPVVEMASRSKLS 621 (712)
Q Consensus 597 ~~~~~~~-----~~--------------------------------------------------~~~~~~~~~~~~~~v~ 621 (712)
+.+.... +. .........+|...|.
T Consensus 172 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~ 251 (317)
T d1vyhc1 172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 251 (317)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred eccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEE
Confidence 8752100 00 0001122346788999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
+++|+| ++++|++|+.||.|+|||+++++++.++.+|.+.|++++|+| ++.+|+|||.|++|+|||
T Consensus 252 ~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 252 GVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEECS-SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC
T ss_pred EEEECC-CCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEeC
Confidence 999999 589999999999999999999999999999999999999998 899999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=2.6e-19 Score=187.40 Aligned_cols=187 Identities=15% Similarity=0.160 Sum_probs=150.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccC--------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE--------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~ 560 (712)
..++...+.+..|+++|..++....+ ....+.....+|...+..++| ..++...+....++.+ +|+++
T Consensus 137 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~---s~~~~~~~~~~~d~~v~i~d~~ 213 (337)
T d1gxra_ 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDI---SNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc
Confidence 34566677888899988765332222 122345567789999999998 3444444444445554 49999
Q ss_pred CCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 561 QGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 561 ~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+++.+ .|.+.|.+++|+|++++|++|+.|+.|++||+++. .......|...|++++|+| ++++|++|+
T Consensus 214 ~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~i~~v~~s~-~g~~l~s~s 284 (337)
T d1gxra_ 214 EGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP--------DKYQLHLHESCVLSLKFAY-CGKWFVSTG 284 (337)
T ss_dssp TTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS--------CEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred cceeecccccccceEEEEEcccccccceecccccccccccccc--------ccccccccccccceEEECC-CCCEEEEEe
Confidence 87654 57999999999999999999999999999999762 2345678899999999999 689999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
.||+|++||+.+++++.++. |...|++++|+| ++++|++||.|++|+|||+
T Consensus 285 ~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~-d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 285 KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTSEEEEEETTTCCEEEEEE-CSSCEEEEEECT-TSCEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeC-CCCEEEEEeCCCeEEEEEE
Confidence 99999999999999998765 789999999998 8999999999999999996
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.81 E-value=1.1e-18 Score=181.28 Aligned_cols=194 Identities=17% Similarity=0.106 Sum_probs=151.9
Q ss_pred CcccccccCCCCCCCCccc-------cCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc---
Q 005147 495 PLVRHSQLSSDGRTSKPLV-------NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD--- 563 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~--- 563 (712)
+.....+++|+|..+++.. .-........+.||...+..+.| +| +|...+....++.+. |++..+.
T Consensus 18 ~~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~-sp--~g~~latg~~dg~i~iwd~~~~~~~~ 94 (311)
T d1nr0a1 18 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKT-SP--SGYYCASGDVHGNVRIWDTTQTTHIL 94 (311)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEE-CT--TSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred CCeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCCCCEEEEEE-eC--CCCeEeccccCceEeeeeeecccccc
Confidence 3445567788887653321 01123344567899999999999 44 455445544455554 9998754
Q ss_pred ---eecCCCCeeEEEEcCCCCEEEEEeC--CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 564 ---LLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 564 ---~~~h~~~V~~i~f~~~~~~lat~~~--d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
+.+|.+.|.+++|+|++++|+++|. ++.++|||+.+... .....+|...|++|+|+|.....|++|+.
T Consensus 95 ~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~-------~~~l~~h~~~v~~v~~~~~~~~~l~sgs~ 167 (311)
T d1nr0a1 95 KTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS-------NGNLTGQARAMNSVDFKPSRPFRIISGSD 167 (311)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB-------CBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred ccccccccCccccccccccccccccccccccccccccccccccc-------cccccccccccccccccccceeeeccccc
Confidence 3468999999999999999999986 45699999976321 12235688899999999954446999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
||.|++||+++++....+.+|..+|+++.|+| +++++++|+.|+.|++||++++..+..+
T Consensus 168 d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p-~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 227 (311)
T d1nr0a1 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVF 227 (311)
T ss_dssp TSCEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred ccccccccccccccccccccccccccccccCc-cccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999998 9999999999999999999998887654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=6.5e-19 Score=184.34 Aligned_cols=128 Identities=20% Similarity=0.291 Sum_probs=113.5
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
.+|.+.|.+++|+|++++|++|+.|++|++||+... ..........|...+.+++|+| ++.++++++.|+.|.+
T Consensus 94 ~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~ 167 (337)
T d1gxra_ 94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP-----TPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAV 167 (337)
T ss_dssp SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEeeccccccccccccc-----cccccccccccccccccccccc-cccccccccccccccc
Confidence 368999999999999999999999999999998641 1122234557888999999999 6899999999999999
Q ss_pred EECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
||++++++.....+|...|++++|+| ++..+++|+.|+.|++||+++++.+..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~~~~~~~d~~v~i~d~~~~~~~~~~ 221 (337)
T d1gxra_ 168 WDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cccccccccccccccccccccccccc-cccccccccccccccccccccceeeccc
Confidence 99999999999999999999999997 8999999999999999999999887654
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=1.4e-18 Score=183.98 Aligned_cols=199 Identities=16% Similarity=0.156 Sum_probs=137.4
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC-------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER-------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG 562 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~ 562 (712)
..+|...+.+..+++++........+. ..........+........| .+....++...+.+....+|+..++
T Consensus 159 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~d~~i~i~~~~~~ 237 (388)
T d1erja_ 159 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV-SPGDGKYIAAGSLDRAVRVWDSETG 237 (388)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE-CSTTCCEEEEEETTSCEEEEETTTC
T ss_pred cccccccccccccccccccccccccceeeeeeeccccccccccccccccccccc-cCCCCCeEEEEcCCCeEEEeecccC
Confidence 345667778888888776542221111 11111222233333334444 2323333333344433344776654
Q ss_pred ce-----------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC-----cccccceEEecCCCCeEEEEEc
Q 005147 563 DL-----------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-----RDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 563 ~~-----------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~-----~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
.. .+|.+.|.+++|+|++++|++|+.|+.|++||+++..... ...........|...|++++|+
T Consensus 238 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 317 (388)
T d1erja_ 238 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317 (388)
T ss_dssp CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC
T ss_pred ccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEEC
Confidence 42 2588999999999999999999999999999997643211 1122234556789999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEE------ecCCCCEEEEEECCCcEEEEeCC
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDF------SSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~f------sp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
| ++.+|++|+.||+|++||+++++++.++.+|.+.|+++++ +| ++.+|||||.||+|+||+++
T Consensus 318 ~-~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~sp-d~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 318 Q-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP-EYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp G-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCT-TCEEEEEEETTSEEEEEEEE
T ss_pred C-CCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCC-CCCEEEEEeCCCEEEEEeee
Confidence 9 5899999999999999999999999999999999999986 44 78899999999999999985
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=1.6e-18 Score=185.69 Aligned_cols=130 Identities=15% Similarity=0.263 Sum_probs=108.5
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc---EE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV---VQ 643 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~---V~ 643 (712)
+...+.+++|+|++ +||||+.|++|+|||+.+..... .........+|...|++|+|+| ++.+|++|+.|++ |+
T Consensus 183 ~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-~~~~~~~l~~h~~~V~~l~~sp-dg~~l~sgs~D~t~~~i~ 259 (393)
T d1sq9a_ 183 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY-NFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCIT 259 (393)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE-EEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccc-ccccccccccccceEEEccccc-ccceeeeecCCCCcceee
Confidence 46778999999987 89999999999999997632211 0111223457899999999999 6999999999975 99
Q ss_pred EEECCCCcEEEEec-------------cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMR-------------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~-------------~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|||+.+++++.++. +|.+.|++|+|+| ++++|+|||.|++|+|||+.+++++.++-
T Consensus 260 lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~~g~~~~~l~ 328 (393)
T d1sq9a_ 260 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLN 328 (393)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ecccccceeeeeeccccccccceeeeecccCceeeeccCC-CCCeeEEECCCCEEEEEECCCCCEEEEEC
Confidence 99999999888774 7999999999998 99999999999999999999999887763
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=1.1e-17 Score=172.63 Aligned_cols=172 Identities=14% Similarity=0.187 Sum_probs=130.0
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
+|+||.+.|.+++| + .++...++...++.++ |++.+++. ..|.+.|.+++|+|++.++++|+.|+.|++|+.
T Consensus 50 tL~GH~~~I~~l~~-s--~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~ 126 (340)
T d1tbga_ 50 TLRGHLAKIYAMHW-G--TDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EECCCSSCEEEEEE-C--TTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEES
T ss_pred EECCCCCCEEEEEE-C--CCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccc
Confidence 46666666666666 2 2333333333334333 76666553 368999999999999999999999999999997
Q ss_pred CCccccCcc--------------------------------------cccceEEecCCCCeEEEEEcCCCCCEEEEEeCC
Q 005147 598 DAIINENRD--------------------------------------IHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 598 ~~~~~~~~~--------------------------------------~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D 639 (712)
......... .........+...+.+..+.+ ...++++|+.|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d 205 (340)
T d1tbga_ 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACD 205 (340)
T ss_dssp SSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETT
T ss_pred cccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccc-ccceeEEeecC
Confidence 652211100 000111223456677788887 58899999999
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.|++||+++++++.++.+|...|++++|+| ++.+|++|+.|+.|++||++....+..+
T Consensus 206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p-~~~~l~s~s~d~~i~~~~~~~~~~~~~~ 264 (340)
T d1tbga_ 206 ASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp TEEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCcEEEEEeCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeeccccccccc
Confidence 9999999999999999999999999999998 9999999999999999999998887655
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=1.5e-18 Score=180.98 Aligned_cols=204 Identities=10% Similarity=0.076 Sum_probs=145.8
Q ss_pred CC-CCcccccccCCCCC--CCCccccCCC----------CCCc------eeeccCCCccceecccCCCCCCcEEEEEc-C
Q 005147 492 SG-RPLVRHSQLSSDGR--TSKPLVNERS----------SINN------LGSKEGYSEGRRSGWINPFLEGLCKYLSF-S 551 (712)
Q Consensus 492 ~~-~~~~~~~~~~~~g~--~~~~~~~~~~----------~~~~------~~l~gh~~~~~~~~~~~~~~~~~~~~~~~-~ 551 (712)
+| ...++++.|+|++. .++....+.. .... -.+..|.+++..+.| ++....++.+... +
T Consensus 60 gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-s~~~~~l~~~~~~~~ 138 (325)
T d1pgua1 60 GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW-DFEGRRLCVVGEGRD 138 (325)
T ss_dssp TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE-CTTSSEEEEEECCSS
T ss_pred CCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEE-CCCCCccceeecccc
Confidence 44 35689999998544 3333222211 0111 124568888999999 3322222222222 3
Q ss_pred CcEEEEEccCCcee----cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 552 KLRVKADLNQGDLL----NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 552 ~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
....+|+..++++. +|...|.+++|+|++. ++++++.|+.|++||........ .......|...|++++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~----~~~~~~~~~~~v~~v~~~ 214 (325)
T d1pgua1 139 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA----SDRTHHKQGSFVRDVEFS 214 (325)
T ss_dssp CSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE----EECSSSCTTCCEEEEEEC
T ss_pred ceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccce----ecccccCCCCccEEeeec
Confidence 34455887766543 6899999999999876 57889999999999986522111 001123567889999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEec--CCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSS--ADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp--~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|+.+.+|++|+.||.|++||+++++++.++.+|..++.++.|++ .++.+|++||.|++|+|||+++++++..+.
T Consensus 215 pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEE
Confidence 97789999999999999999999999999999988776555541 278999999999999999999999887764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=4.7e-18 Score=179.97 Aligned_cols=207 Identities=17% Similarity=0.234 Sum_probs=150.9
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl 559 (712)
...++...++++.|+|||..++....+. .......+.+|...+..+.| ..++...+.....+.+. |+.
T Consensus 116 ~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~~~~~~~~~~i~~~d~ 192 (388)
T d1erja_ 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDL 192 (388)
T ss_dssp ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEET
T ss_pred cccCCCCCEEEEEECCCCCcceeccccccccccccccccccccccccccccccccc---ccccccccccccceeeeeeec
Confidence 3456778899999999998764443322 22345677899999999998 34454445555555554 999
Q ss_pred cCCcee---cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 560 NQGDLL---NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 560 ~~~~~~---~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
++.... .+.....++.|.+ ++++|++|+.|+.|++||..+...............+|...|++++|+| ++.+|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~s 271 (388)
T d1erja_ 193 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVS 271 (388)
T ss_dssp TTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEE
T ss_pred cccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECC-CCCEEEE
Confidence 876544 3455555666655 8899999999999999999864322211111223346889999999999 6999999
Q ss_pred EeCCCcEEEEECCCCc------------EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 636 SNFEGVVQVWDVSRSQ------------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~------------~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|+.||.|++||++++. +......|...|++++|+| ++.+|++|+.||+|++||+++++++.++-
T Consensus 272 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~sg~~dg~i~vwd~~~~~~~~~l~ 347 (388)
T d1erja_ 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347 (388)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECC-CCCEEEEEeCCCEEEEEECCCCcEEEEEe
Confidence 9999999999998643 4556678999999999998 89999999999999999999999987653
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=8.1e-18 Score=178.57 Aligned_cols=156 Identities=13% Similarity=0.164 Sum_probs=125.4
Q ss_pred CCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 528 YSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
..++..++| +.+|...+....++.+ +|++.+++ +.+|.+.|.+++|+|++++|+|||.|++|+|||+.+.
T Consensus 7 ~~pIt~~~~---s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~ 83 (371)
T d1k8kc_ 7 VEPISCHAW---NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 83 (371)
T ss_dssp SSCCCEEEE---CTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred CCCeEEEEE---CCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence 345678888 4566555555555655 49887664 3479999999999999999999999999999999652
Q ss_pred cccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE----EEEeccCCCcEEEEEEecCCCCEE
Q 005147 601 INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~----~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
..........|...|++++|+| +++.|++|+.|++|++|++..... ......|...|++++|+| ++.+|
T Consensus 84 -----~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l 156 (371)
T d1k8kc_ 84 -----TWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLL 156 (371)
T ss_dssp -----EEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEE
T ss_pred -----cccccccccccccccccccccc-ccccceeecccCcceeeeeecccccccccccccccccccccccccc-cccce
Confidence 2222334457888999999999 589999999999999999876542 344567999999999998 99999
Q ss_pred EEEECCCcEEEEeCCCC
Q 005147 677 ASGSDDGSVKLWSINQA 693 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~ 693 (712)
|+|+.|++|++||....
T Consensus 157 ~s~s~D~~v~v~~~~~~ 173 (371)
T d1k8kc_ 157 AAGSCDFKCRIFSAYIK 173 (371)
T ss_dssp EEEETTSCEEEEECCCT
T ss_pred eccccCcEEEEEeeccC
Confidence 99999999999998654
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.74 E-value=3.1e-17 Score=167.40 Aligned_cols=195 Identities=15% Similarity=0.141 Sum_probs=146.5
Q ss_pred CCCCCcccccccCCCCCCCCcc--------ccCCCC--CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPL--------VNERSS--INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~--~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.+|...++++.|++||...... ...... .......+|...+..+.| ..++.+.+...++...+|+..
T Consensus 52 ~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~g~~~~~~~~~~i~~~~~~ 128 (299)
T d1nr0a2 52 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV---SADGDIAVAACYKHIAIYSHG 128 (299)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE---CTTSSCEEEEESSEEEEEETT
T ss_pred CCCCCcEEEEEeeccceeecccceeeEEEeccCCcccccccccccccccccccccc---ccccccccccccccccccccc
Confidence 4577789999999998743111 111111 112234456666777777 345555666666555568765
Q ss_pred CCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 561 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 561 ~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
..........+.+++|+|++++|++|+.|+.|++||+++.. ........|...|++++|+| ++.+|++|+.||
T Consensus 129 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~ 201 (299)
T d1nr0a2 129 KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS------VSEVKTIVHPAEITSVAFSN-NGAFLVATDQSR 201 (299)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE------EEEEEEEECSSCEEEEEECT-TSSEEEEEETTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccc-cccccccccccc
Confidence 44334456678999999999999999999999999996521 12345567899999999999 589999999999
Q ss_pred cEEEEECCCCcEE---EEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 641 VVQVWDVSRSQVL---TEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 641 ~V~lwD~~~~~~~---~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.|++||+.++..+ ..+.+|...|++++|+| ++.+|++||.|++|++||++++...
T Consensus 202 ~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~~l~sgs~dg~i~iwd~~~~~~~ 259 (299)
T d1nr0a2 202 KVIPYSVANNFELAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNKPSDH 259 (299)
T ss_dssp CEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCTTSC
T ss_pred ccccccccccccccccccccccccccccccccc-cccceEEEcCCCEEEEEECCCCCcc
Confidence 9999999987654 45678999999999998 9999999999999999999887644
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.73 E-value=1.3e-16 Score=161.68 Aligned_cols=169 Identities=20% Similarity=0.274 Sum_probs=142.5
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
...|+||.+.|..+.| ++. ..++...+.|....+|++.++++. +|.+.|.+++|+|++.++++++.++.+.+|+
T Consensus 10 ~~~L~GH~~~I~~l~~-sp~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (317)
T d1vyhc1 10 KYALSGHRSPVTRVIF-HPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 87 (317)
T ss_dssp SCEEECCSSCEEEEEE-CSS-SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred cEEEcCCCCCeEEEEE-cCC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccc
Confidence 4579999999999999 442 233444444444445999987644 6899999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
.... ........|...+.++.|+| +++.+++++.|+.+++||+++++.+.++.+|...+.+++|+| ++.+|
T Consensus 88 ~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 158 (317)
T d1vyhc1 88 FQGF-------ECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLI 158 (317)
T ss_dssp TTSS-------CEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEE
T ss_pred cccc-------ccccccccccccceeeeccC-CCceEEeeccCcceeEeecccceeeeEEccCCCcceeeeccc-CCCEE
Confidence 8652 22233456788999999999 689999999999999999999999999999999999999997 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|+.|+.|++|+++++..+..+.
T Consensus 159 ~~~~~d~~v~~~~~~~~~~~~~~~ 182 (317)
T d1vyhc1 159 ASCSNDQTVRVWVVATKECKAELR 182 (317)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEeCCCeEEEEeeccceeeEEEe
Confidence 999999999999999988876654
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.73 E-value=2.4e-16 Score=164.05 Aligned_cols=198 Identities=8% Similarity=0.008 Sum_probs=150.1
Q ss_pred CcccccccCCCCCCCCccc--------c---CCCCCCceeeccCC-CccceecccCCCCCCcEEEEEcCCcEEE-EEccC
Q 005147 495 PLVRHSQLSSDGRTSKPLV--------N---ERSSINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ 561 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~--------~---~~~~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~ 561 (712)
..+++..|+|+|..+++.. . .....+...+.||. ..+..+.| +|..++...+....++.++ |++..
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~f-sP~~~g~~lasgs~Dg~i~iWd~~~ 96 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKF-SPIKGSQYLCSGDESGKVIVWGWTF 96 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEE-CSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEE-eeCCCCCEEEEEeCCCCEEEeeecC
Confidence 3567788888887553321 1 11223455778885 67889999 7777776666665666665 98865
Q ss_pred Cc------------eecCCCCeeEEEEcCCCCEEEEEeC--CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcC
Q 005147 562 GD------------LLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 562 ~~------------~~~h~~~V~~i~f~~~~~~lat~~~--d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p 627 (712)
+. +..|.+.|.+++|++++.++++++. ++.+++|+..++ .......+|...|++++|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~ 169 (325)
T d1pgua1 97 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG-------NSLGEVSGHSQRINACHLKQ 169 (325)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-------CEEEECCSCSSCEEEEEECS
T ss_pred CcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeeccc-------ccceeeeecccccccccccc
Confidence 33 1247889999999999999888764 678999998753 12233456899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEe---ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEM---REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.....+++++.||.|++||..+.+....+ ..|...|++++|+|..+.+|++|+.|+.|++||+++++.+.++-
T Consensus 170 ~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~ 245 (325)
T d1pgua1 170 SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245 (325)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred cccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccc
Confidence 65557889999999999999988766554 46788899999999668999999999999999999999886653
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=8.7e-17 Score=171.86 Aligned_cols=126 Identities=22% Similarity=0.354 Sum_probs=96.9
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccC-CceecCCCCeeEEEEcCCCCEEEEEeCCCc---EEEEEcCCccccCc------c
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQ-GDLLNSSNLVCSLSFDRDGELFAAAGVNKK---IKVFECDAIINENR------D 606 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~-~~~~~h~~~V~~i~f~~~~~~lat~~~d~~---I~iwD~~~~~~~~~------~ 606 (712)
+++..|+.+++|+..+++.+..+.. ..+.+|...|.+++|+|++++|++|+.|++ |++||+.++..... .
T Consensus 199 asgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~ 278 (393)
T d1sq9a_ 199 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 278 (393)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccccc
Confidence 4566778888888777776655543 345689999999999999999999999975 99999986422111 0
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcE
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV 663 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v 663 (712)
........+|...|++|+|+| ++++|+||+.|++|+|||+.+++++.++.+|.+.|
T Consensus 279 ~~~~~~~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 279 SQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334 (393)
T ss_dssp -----CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred ccceeeeecccCceeeeccCC-CCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence 111122347999999999999 69999999999999999999999999999997544
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.71 E-value=1.8e-16 Score=161.68 Aligned_cols=189 Identities=13% Similarity=0.199 Sum_probs=128.6
Q ss_pred CCCcccccccCCCCCCCCccccCCC---CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS---SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL---- 564 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~---- 564 (712)
+...+.+..+++||........... .............+..+.| ..++...+....++.+. |++.++.+
T Consensus 98 ~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~ 174 (299)
T d1nr0a2 98 LSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL---SNDKQFVAVGGQDSKVHVYKLSGASVSEVK 174 (299)
T ss_dssp CSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE---CTTSCEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 3445667888899875522111100 0000111112223344555 33444444555555554 99877653
Q ss_pred -ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 565 -LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 565 -~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
..|.+.|.+++|+|++++|++++.|+.|++||+.+... .........|...|++++|+| ++.+|++|+.||.|+
T Consensus 175 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~----~~~~~~~~~h~~~v~~l~~s~-~~~~l~sgs~dg~i~ 249 (299)
T d1nr0a2 175 TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE----LAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVI 249 (299)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE----ESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred ccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccc-cccceEEEcCCCEEE
Confidence 36899999999999999999999999999999975321 111223346889999999999 699999999999999
Q ss_pred EEECCCCcE--EEEecc-CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 644 VWDVSRSQV--LTEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 644 lwD~~~~~~--~~~~~~-H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|||++++.. +..... |...|.++.|. ++.+|+|||.|++|++||+.
T Consensus 250 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 250 VWNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEETTCTTSCCEEETTSSTTSCEEEEEEE--ETTEEEEEETTSCEEEEECC
T ss_pred EEECCCCCcceEEEecCCCCCcEEEEEEC--CCCEEEEEeCCCEEEEEecc
Confidence 999998643 333344 45567777665 47899999999999999983
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=5.1e-16 Score=157.38 Aligned_cols=140 Identities=15% Similarity=0.224 Sum_probs=109.4
Q ss_pred CcEEEEEcCCcEE-EEEccCCce-----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 543 GLCKYLSFSKLRV-KADLNQGDL-----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 543 ~~~~~~~~~~~~v-~~dl~~~~~-----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
..+.+...+...+ +|++..... ..|...|++++|+|++.+|++|+.|+.|++||+.+.... ......|
T Consensus 131 ~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~------~~~~~~h 204 (287)
T d1pgua2 131 NYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK------TSRWAFR 204 (287)
T ss_dssp SEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE------ECCSCCC
T ss_pred cceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccc------ccccccc
Confidence 3444444444333 377654332 146788999999999999999999999999999752210 1123468
Q ss_pred CCCeEEEEEcCC---------CCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEE
Q 005147 617 RSKLSSICWNSY---------IKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (712)
Q Consensus 617 ~~~v~~v~~~p~---------~~~~lasgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~ 686 (712)
...|++++|+|. +..+|+||+.|++|+|||+++ ++.+..+.+|...|++|+|+| ++ .|+|+|.|++|+
T Consensus 205 ~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~-~~-~l~s~g~D~~v~ 282 (287)
T d1pgua2 205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PS-TLVSSGADACIK 282 (287)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEE-TT-EEEEEETTSCEE
T ss_pred ccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECC-CC-EEEEEECCCeEE
Confidence 899999999983 356899999999999999987 467888899999999999998 54 689999999999
Q ss_pred EEeC
Q 005147 687 LWSI 690 (712)
Q Consensus 687 lWd~ 690 (712)
+||+
T Consensus 283 iW~i 286 (287)
T d1pgua2 283 RWNV 286 (287)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=6.6e-15 Score=151.64 Aligned_cols=170 Identities=13% Similarity=0.238 Sum_probs=123.0
Q ss_pred ceeeccCCCccce-ecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRR-SGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
..+|+||.+.+.. +++ .+.++...+.+....+||+.+++++ +|.+.|.+++|+|+ ++|++|+.|++|++|
T Consensus 5 ~~tL~GH~~~vitc~~~----~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw 79 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF----EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVW 79 (355)
T ss_dssp EEEEECCSSSCEEEEEE----ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEE
T ss_pred cEEECCcCCCcEEEEEE----CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccc
Confidence 4678899887643 332 3344444444333344888876643 68889999999874 578888888888888
Q ss_pred EcCCcccc---------------------------Ccc------------------------------------------
Q 005147 596 ECDAIINE---------------------------NRD------------------------------------------ 606 (712)
Q Consensus 596 D~~~~~~~---------------------------~~~------------------------------------------ 606 (712)
+....... ..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (355)
T d1nexb2 80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159 (355)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence 87651000 000
Q ss_pred -------------------------------cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 005147 607 -------------------------------IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE 655 (712)
Q Consensus 607 -------------------------------~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~ 655 (712)
.........+...+.++.|+| .+.++++++.||+|++||++++.++..
T Consensus 160 ~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~i~d~~~~~~~~~ 238 (355)
T d1nexb2 160 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYT 238 (355)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred ccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccc-cceeeecccccceEEeeeccccccccc
Confidence 000001113445667888988 589999999999999999999999999
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 656 MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.+|...|++++|+| ++|++|+.||+|++||++++......
T Consensus 239 ~~~h~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~ 279 (355)
T d1nexb2 239 LQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSY 279 (355)
T ss_dssp ECCCSSCCCEEEECS---SEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccccccccccccc---ceeeeeecccccccccccccceeccc
Confidence 999999999999974 79999999999999999988766543
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.1e-15 Score=150.12 Aligned_cols=166 Identities=14% Similarity=0.176 Sum_probs=105.5
Q ss_pred CCceeeccCCCccce-ecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRR-SGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
.+...|+||.+.|.. ++| ....+...+.|....+|++.+++++ +|.+.|.+++|++ ++|++|+.|+.++
T Consensus 7 ~~~~~l~GH~~~V~s~~~~----~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~--~~l~s~s~D~~~~ 80 (342)
T d2ovrb2 7 KSPKVLKGHDDHVITCLQF----CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLK 80 (342)
T ss_dssp CCCEEEECSTTSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET--TEEEEEETTSCEE
T ss_pred CcCEEECCcCCceEEEEEE----CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCC--Cccccceeccccc
Confidence 355789999999854 333 2334444444444455999887754 6999999999986 4999999999999
Q ss_pred EEEcCCccccCc---------------------------------c----------------------------------
Q 005147 594 VFECDAIINENR---------------------------------D---------------------------------- 606 (712)
Q Consensus 594 iwD~~~~~~~~~---------------------------------~---------------------------------- 606 (712)
+|+......... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 160 (342)
T d2ovrb2 81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 160 (342)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred ccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEE
Confidence 999765110000 0
Q ss_pred ------cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 607 ------IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 607 ------~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
........+|...+.++.+ ++.+|++|+.||.|++||++.++++.++.+|...|.++++++ ++|++|+
T Consensus 161 ~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~s 234 (342)
T d2ovrb2 161 VWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---NILVSGN 234 (342)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---TEEEEEE
T ss_pred EeecccceeeEEEcCcccccccccC---CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC---CEEEEEc
Confidence 0000011123333333333 356888888888888888888888888877777777777664 3555555
Q ss_pred CCCcEEEEeCCCCcEE
Q 005147 681 DDGSVKLWSINQAILL 696 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v 696 (712)
.|+.|++||+.+.+..
T Consensus 235 ~d~~i~iwd~~~~~~~ 250 (342)
T d2ovrb2 235 ADSTVKIWDIKTGQCL 250 (342)
T ss_dssp TTSCEEEEETTTCCEE
T ss_pred CCCEEEEEeccccccc
Confidence 5555555555544443
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=7.7e-15 Score=150.28 Aligned_cols=157 Identities=13% Similarity=0.197 Sum_probs=113.8
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
..+.+|...+....+ ....+...+.+....+|+++.+... +|...|.+++|++ ++|++|+.|+.|++||+
T Consensus 171 ~~~~~~~~~~~~~~~----~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~ 244 (342)
T d2ovrb2 171 HTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 244 (342)
T ss_dssp EEECCCSSCEEEEEE----CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEET
T ss_pred EEEcCcccccccccC----CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC--CEEEEEcCCCEEEEEec
Confidence 445566655543333 2223333333333344777766543 5888999888864 69999999999999999
Q ss_pred CCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-----cCCCcEEEEEEecCC
Q 005147 598 DAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-----EHERRVWSIDFSSAD 672 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-----~H~~~v~sv~fsp~~ 672 (712)
...... ........|...+.++++++ +++++|+.||+|+|||+++++.++++. +|...|++|+|+| +
T Consensus 245 ~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~-~ 316 (342)
T d2ovrb2 245 KTGQCL----QTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-T 316 (342)
T ss_dssp TTCCEE----EEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS-S
T ss_pred cccccc----ccccccceeeeceeecccCC---CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECC-C
Confidence 752110 00011124567778888865 699999999999999999999988874 5888999999998 8
Q ss_pred CCEEEEEECCCc----EEEEeCCC
Q 005147 673 PTLLASGSDDGS----VKLWSINQ 692 (712)
Q Consensus 673 ~~~l~sgs~D~~----v~lWd~~~ 692 (712)
+.++|+|+.||+ |++||+..
T Consensus 317 ~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 317 KLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCEEEEEeCCCCCeeEEEEEeCCC
Confidence 999999999986 99999864
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=9.8e-15 Score=147.66 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=134.9
Q ss_pred CCCCcccccccCCCCCCCCccccCCC-CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCceec---C
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNERS-SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN---S 567 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~---h 567 (712)
+|...+.+..+++++... ....+.. ....+...........+.+ ..++.+.+...++..+.|+..++.... +
T Consensus 44 ~h~~~V~~~~~~~~~~~~-s~s~D~~v~~w~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (287)
T d1pgua2 44 DHSNLIVSLDNSKAQEYS-SISWDDTLKVNGITKHEFGSQPKVASA---NNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119 (287)
T ss_dssp CCCSCEEEEECCSTTCCE-EEETTTEEEETTEEEEECSSCEEEEEE---CSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCCEEEEEecCCCeEE-EEeeccccccccccccccccceeeeee---ccCCceEEEeecccceeeeccceeeeeeccc
Confidence 566677777777655432 2111111 0111111111122223333 456666666666666668887766543 2
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCC-cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNK-KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~-~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
... ..+++++++.+++++.|+ .|++|++..... .......+...+++++|+| ++.+|++|+.||.|++||
T Consensus 120 ~~~--~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~v~~~~~s~-~~~~l~~g~~dg~i~i~d 190 (287)
T d1pgua2 120 NSP--GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV------SFDLKTPLRAKPSYISISP-SETYIAAGDVMGKILLYD 190 (287)
T ss_dssp SSC--EEEEEECSSEEEEEETTTSCEEEEETTEEEE------EEECSSCCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred cce--eeeeeccCcceeeeccccceeeeeeccccce------eeeeeeccCCceeEEEecc-Ccccccccccccccccee
Confidence 333 345677888888888765 799999864211 1112234678899999999 699999999999999999
Q ss_pred CCCCcEEE-EeccCCCcEEEEEEecC---------CCCEEEEEECCCcEEEEeCCCCcEEEEEeceeec
Q 005147 647 VSRSQVLT-EMREHERRVWSIDFSSA---------DPTLLASGSDDGSVKLWSINQAILLLHLVDVSFE 705 (712)
Q Consensus 647 ~~~~~~~~-~~~~H~~~v~sv~fsp~---------~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~ 705 (712)
+.++.... .+.+|..+|++++|+|. ++.+|+|||.|++|+|||++++......+.+|..
T Consensus 191 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~ 259 (287)
T d1pgua2 191 LQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259 (287)
T ss_dssp TTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT
T ss_pred ecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCC
Confidence 99998755 46889999999999972 4579999999999999999886666666665533
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=1.1e-14 Score=148.58 Aligned_cols=210 Identities=14% Similarity=0.073 Sum_probs=135.5
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
..+|+.-+++++|+|||..+++...+.. ........+|.++|..+.| ++....++...+.+....+|+
T Consensus 7 ~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f-~~~~~~~l~sg~~d~~v~~w~ 85 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF-IDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEE-EESSSEEEEEEETTSCEEEEC
T ss_pred CCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEE-eCCCCCEEEEcccccceeeee
Confidence 4577888999999999998755543331 1112333489999999999 333333444444444444588
Q ss_pred ccCCcee-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc------------------------------
Q 005147 559 LNQGDLL-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE------------------------------ 603 (712)
Q Consensus 559 l~~~~~~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~------------------------------ 603 (712)
+..+... .+........+.++...+++++.|+++++||++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (342)
T d1yfqa_ 86 LIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIV 165 (342)
T ss_dssp SSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceee
Confidence 7654422 12333334444555666666666666666665431000
Q ss_pred --------------CcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE---------EE------
Q 005147 604 --------------NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV---------LT------ 654 (712)
Q Consensus 604 --------------~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~---------~~------ 654 (712)
................+.++.+.|.++..+++++.||.+.+|+...... ..
T Consensus 166 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T d1yfqa_ 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred ecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeecc
Confidence 0000111122234455677788777788999999999999999864321 11
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 655 ~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
...+|...|++|+|+| ++.+|||||.||+|+|||+++++.+.++..
T Consensus 246 ~~~~~~~~v~~l~~sp-~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~ 291 (342)
T d1yfqa_ 246 KDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp TCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred CCCcccccceeEEecC-CccEEEEECCCCEEEEEECCCCcEEEEecC
Confidence 1245777899999998 899999999999999999999998877653
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.56 E-value=4e-15 Score=151.98 Aligned_cols=125 Identities=11% Similarity=0.067 Sum_probs=102.0
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
+|.+.|++|+|+|++++|||||.|++|+|||+++... ........+|...|++++|+|..+.+|++|+.||+|.+|
T Consensus 9 ~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~----~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w 84 (342)
T d1yfqa_ 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCc----ceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeee
Confidence 6899999999999999999999999999999965211 112234557999999999999767799999999999999
Q ss_pred ECCCCcEEEEeccCCCcEE-EEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 646 DVSRSQVLTEMREHERRVW-SIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~-sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|+..+........+...+. ...+. .+...+++++.|+++++||++++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wd~~~~~~ 134 (342)
T d1yfqa_ 85 DLIGSPSFQALTNNEANLGICRICK-YGDDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEE-ETTTEEEEEETTSEEEEECHHHHTT
T ss_pred ecccccccccccccccccccccccc-cccccccccccccccceeecccccc
Confidence 9999887777766655544 44444 4889999999999999999865443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=3.4e-13 Score=134.39 Aligned_cols=164 Identities=18% Similarity=0.252 Sum_probs=117.4
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
.+|...|..++| ....+...+.|....+|++.++++ .+|.+.|.+++| ++++|+||+.|+.|++|++...
T Consensus 12 ~~~~~~V~c~~~----d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~ 85 (293)
T d1p22a2 12 SETSKGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 85 (293)
T ss_dssp CSSCCCEEEEEC----CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred CCCCCCEEEEEE----cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence 345555554443 122333333333333477766553 369999999988 5789999999999999998762
Q ss_pred cccC------------------------------------cccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 601 INEN------------------------------------RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 601 ~~~~------------------------------------~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
.... ...........|...+.++.+.+ ..+++++.|+.|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~d~~i~~ 162 (293)
T d1p22a2 86 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKV 162 (293)
T ss_dssp CEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEE
T ss_pred cccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecc---cccccccCCCceee
Confidence 1100 00001112235566777777764 58899999999999
Q ss_pred EECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
||+++++++..+.+|...|..+.++ +.++++|+.|++|++||++++..+....
T Consensus 163 ~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 215 (293)
T d1p22a2 163 WNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE 215 (293)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ecCCCCcEEEEEcccccccccccCC---CCeEEEecCCCEEEEEecccceeeeeec
Confidence 9999999999999999999998887 4689999999999999999988876553
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.52 E-value=8.5e-14 Score=143.12 Aligned_cols=147 Identities=13% Similarity=0.205 Sum_probs=112.7
Q ss_pred cEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCC
Q 005147 544 LCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~ 619 (712)
.+.....+.....|++.+++.. ++...+.++.|+|++.++++++.|+.|++||+++. .......+|...
T Consensus 173 ~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~-------~~~~~~~~h~~~ 245 (355)
T d1nexb2 173 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG-------ELMYTLQGHTAL 245 (355)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC-------CEEEEECCCSSC
T ss_pred eeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccc-------cccccccccccc
Confidence 3333333333444888776543 47888999999999999999999999999999763 223445678999
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|++++|++ ++|++|+.||+|++||++++... +..|...+.++.+.+.++.++++|+ |++|+|||+++++++...
T Consensus 246 v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~ 319 (355)
T d1nexb2 246 VGLLRLSD---KFLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 319 (355)
T ss_dssp CCEEEECS---SEEEEECTTSEEEEEETTTCCEE--EEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSC
T ss_pred cccccccc---ceeeeeeccccccccccccccee--cccccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEE
Confidence 99999975 69999999999999999988654 4557777777655444788887776 889999999999988655
Q ss_pred ecee
Q 005147 700 VDVS 703 (712)
Q Consensus 700 ~~~~ 703 (712)
+.+|
T Consensus 320 ~~~~ 323 (355)
T d1nexb2 320 ILKD 323 (355)
T ss_dssp TTTT
T ss_pred ecCC
Confidence 5443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.46 E-value=3.3e-13 Score=139.85 Aligned_cols=182 Identities=13% Similarity=0.039 Sum_probs=136.7
Q ss_pred cccCC-CCCCCCccc------cCCCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcE-E-EEEccCCce---ec
Q 005147 500 SQLSS-DGRTSKPLV------NERSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLR-V-KADLNQGDL---LN 566 (712)
Q Consensus 500 ~~~~~-~g~~~~~~~------~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~-v-~~dl~~~~~---~~ 566 (712)
..||| ||+..+... -+....+ +...+|...+..+.| +.||. +.+.+.+++. + +|++.++.. .+
T Consensus 8 ~~fSP~dG~~~a~~~~g~v~v~d~~~~~-~~~~~~~~~v~~~~~---spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~ 83 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSRGQAFIQDVSGTY-VLKVPEPLRIRYVRR---GGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEE 83 (360)
T ss_dssp EEEEECGGGCEEEEETTEEEEECTTSSB-EEECSCCSCEEEEEE---CSSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred ccccCCCCCEEEEEECCeEEEEECCCCc-EEEccCCCCEEEEEE---CCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeC
Confidence 34787 887664321 1112223 334589999999999 55664 4444555543 3 499988764 36
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---------
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--------- 637 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--------- 637 (712)
|...|.+++|+|++.+|++++.++.+++|+..+. ........+...+.+++|+| ++.+||.++
T Consensus 84 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~sp-dg~~la~~~~~~~~~~~~ 155 (360)
T d1k32a3 84 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG-------KPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDG 155 (360)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCS
T ss_pred CCceEEeeeecccccccceecccccccccccccc-------ceeeeeecccccccchhhcc-ceeeeeeeccccccceee
Confidence 8999999999999999999999999999999652 22334556778889999999 588888654
Q ss_pred -CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 638 -FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 638 -~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
.++.+++||+.+++.. .+..|...+.++.|+| +|+.|++++.|+.+++||......
T Consensus 156 ~~~~~~~v~d~~~~~~~-~~~~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~~d~~~~~~ 212 (360)
T d1k32a3 156 YVMQAIHVYDMEGRKIF-AATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLNF 212 (360)
T ss_dssp CCEEEEEEEETTTTEEE-ECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSCE
T ss_pred ccccceeeeccccCcee-eecccccccccccccC-CCCEEEEEeCCCceEcccccccce
Confidence 3456999999988765 4555788899999998 999999999999999999876543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=4.7e-13 Score=133.38 Aligned_cols=150 Identities=15% Similarity=0.250 Sum_probs=110.6
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
...+..|...+....+ ........+.+....+|+++++++. +|...|..+.++ +.++++++.|++|++||
T Consensus 131 ~~~~~~~~~~v~~~~~----~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d 204 (293)
T d1p22a2 131 RRVLVGHRAAVNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD 204 (293)
T ss_dssp EEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred ccccccccccccccee----cccccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEe
Confidence 3455677766655444 2334444444444445888876644 577888888775 56899999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC---------CcEEEEeccCCCcEEEEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR---------SQVLTEMREHERRVWSID 667 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~---------~~~~~~~~~H~~~v~sv~ 667 (712)
+++. .......++...+.++.+ +..+|++|+.||.|++||+.+ ..++.++.+|.+.|++|+
T Consensus 205 ~~~~-------~~~~~~~~~~~~v~~~~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~ 274 (293)
T d1p22a2 205 IECG-------ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 274 (293)
T ss_dssp TTTC-------CEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE
T ss_pred cccc-------eeeeeecccceeeeeccc---cceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEE
Confidence 9752 222334456666666544 467999999999999999753 357889999999999999
Q ss_pred EecCCCCEEEEEECCCcEEEEe
Q 005147 668 FSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 668 fsp~~~~~l~sgs~D~~v~lWd 689 (712)
|+ +.+|+|||.|++|+|||
T Consensus 275 ~d---~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 275 FD---EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EC---SSCEEECCSSSEEEEEC
T ss_pred Ec---CCEEEEEecCCEEEEeC
Confidence 96 47899999999999998
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.45 E-value=4.2e-13 Score=139.05 Aligned_cols=152 Identities=9% Similarity=0.067 Sum_probs=120.3
Q ss_pred eecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--cCCCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCccc
Q 005147 533 RSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL--NSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDI 607 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~--~h~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~~~ 607 (712)
.-+| +|....++++. . .+++. |++..+... +|...|.+++|+|||+.|+++|.+. .|++||..++
T Consensus 7 ~~~f-SP~dG~~~a~~-~-~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~------- 76 (360)
T d1k32a3 7 AEDF-SPLDGDLIAFV-S-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG------- 76 (360)
T ss_dssp EEEE-EECGGGCEEEE-E-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC-------
T ss_pred cccc-cCCCCCEEEEE-E-CCeEEEEECCCCcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC-------
Confidence 3445 44333343333 2 34544 888877644 6899999999999999998877654 7999999762
Q ss_pred ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE-------
Q 005147 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS------- 680 (712)
Q Consensus 608 ~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs------- 680 (712)
.......|...|.+++|+| ++++|++++.++.+.+||+.++++...+..|...+.+++|+| ++++|+.++
T Consensus 77 -~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~~~~~~~~ 153 (360)
T d1k32a3 77 -KAEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGET 153 (360)
T ss_dssp -CEEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTT
T ss_pred -cEEEeeCCCceEEeeeecc-cccccceeccccccccccccccceeeeeecccccccchhhcc-ceeeeeeeccccccce
Confidence 2234567889999999999 699999999999999999999999999999999999999998 999998654
Q ss_pred ---CCCcEEEEeCCCCcEEE
Q 005147 681 ---DDGSVKLWSINQAILLL 697 (712)
Q Consensus 681 ---~D~~v~lWd~~~~~~v~ 697 (712)
.++.+++||+.+++...
T Consensus 154 ~~~~~~~~~v~d~~~~~~~~ 173 (360)
T d1k32a3 154 DGYVMQAIHVYDMEGRKIFA 173 (360)
T ss_dssp CSCCEEEEEEEETTTTEEEE
T ss_pred eeccccceeeeccccCceee
Confidence 45569999999876543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.35 E-value=8.3e-14 Score=133.20 Aligned_cols=87 Identities=16% Similarity=0.035 Sum_probs=65.9
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
...|..+.|++++..++ + ...+++|++. +..+.+ ++...+..++.||+.+|.|||++||+|||
T Consensus 65 ~~~l~~l~~~~v~~~~~-~-------~~~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~giiHrD 128 (191)
T d1zara2 65 FRALQKLQGLAVPKVYA-W-------EGNAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRGIVHGD 128 (191)
T ss_dssp HHHHHHTTTSSSCCEEE-E-------ETTEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHHccCCCcceEEE-e-------cCCEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhCCEEEcc
Confidence 34566678888877554 1 1125677775 444332 56667789999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCC
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDS 132 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~ 132 (712)
|||+|||+++. .+++||||.+...
T Consensus 129 iKP~NILv~~~-~~~liDFG~a~~~ 152 (191)
T d1zara2 129 LSQYNVLVSEE-GIWIIDFPQSVEV 152 (191)
T ss_dssp CSTTSEEEETT-EEEECCCTTCEET
T ss_pred CChhheeeeCC-CEEEEECCCcccC
Confidence 99999999854 5899999988554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.18 E-value=1.3e-10 Score=118.37 Aligned_cols=78 Identities=13% Similarity=0.150 Sum_probs=64.6
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
..+.++.++| ++.+++.+ ++.|++||+.+++.+..+. +...+.+++|+| ||++|++|+.|++|.+||+.+++.+.
T Consensus 241 ~~~~~~~~~~-~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~-dG~~l~v~~~~~~i~v~D~~t~~~v~ 315 (337)
T d1pbyb_ 241 VFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp SCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred cceEEEEecc-cceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 3445566666 35666555 4789999999999998885 677889999998 99999999999999999999999998
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
++-
T Consensus 316 ~i~ 318 (337)
T d1pbyb_ 316 QVD 318 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.18 E-value=1.1e-10 Score=125.84 Aligned_cols=149 Identities=13% Similarity=0.022 Sum_probs=102.1
Q ss_pred cEEEEEcCCcEEE-EEccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceE-EecCCC
Q 005147 544 LCKYLSFSKLRVK-ADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRS 618 (712)
Q Consensus 544 ~~~~~~~~~~~v~-~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~ 618 (712)
++.+...+++++. ||..+++++. ....+..++|+|||+++++++.|++|++||+.+..... ...+. ...|..
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~---~~~i~~~~~~~~ 109 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT---VAEIKIGSEARS 109 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE---EEEEECCSEEEE
T ss_pred EEEEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceE---EEEEecCCCCCC
Confidence 3333333444433 5555544332 12468999999999999999999999999997632111 00011 112334
Q ss_pred CeEEEEEcCCCCCE-EEEEeCCCcEEEEECCCCcEEEEeccC-----------CCcEEEEEEecCCCC-EEEEEECCCcE
Q 005147 619 KLSSICWNSYIKSQ-IASSNFEGVVQVWDVSRSQVLTEMREH-----------ERRVWSIDFSSADPT-LLASGSDDGSV 685 (712)
Q Consensus 619 ~v~~v~~~p~~~~~-lasgs~Dg~V~lwD~~~~~~~~~~~~H-----------~~~v~sv~fsp~~~~-~l~sgs~D~~v 685 (712)
.+.++.|+| |+++ +++++.+++|+|||..+++++..+..| ......|.++| ++. ++++.++++.|
T Consensus 110 ~~~s~~~Sp-DG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~~~vs~~~~~~i 187 (432)
T d1qksa2 110 IETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH-YRPEFIVNVKETGKI 187 (432)
T ss_dssp EEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS-SSSEEEEEETTTTEE
T ss_pred eEEecccCC-CCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECC-CCCEEEEEEccCCeE
Confidence 455566677 5775 578889999999999999998887644 45677889997 665 46777889999
Q ss_pred EEEeCCCCcEEE
Q 005147 686 KLWSINQAILLL 697 (712)
Q Consensus 686 ~lWd~~~~~~v~ 697 (712)
.+||..+++...
T Consensus 188 ~~~d~~~~~~~~ 199 (432)
T d1qksa2 188 LLVDYTDLNNLK 199 (432)
T ss_dssp EEEETTCSSEEE
T ss_pred EEEEccCCCcce
Confidence 999998877543
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.04 E-value=4.2e-09 Score=105.21 Aligned_cols=149 Identities=10% Similarity=0.115 Sum_probs=110.9
Q ss_pred ccCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
|+....++.+.+|+..+++++..+.. ...+.+++|+|||+++ ++++.+++|++||+.+.. .+...
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~------g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~--------~~~~~ 70 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN--------VIATV 70 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--------EEEEE
T ss_pred EEEECCCCEEEEEECCCCeEEEEEEC------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc--------eeeee
Confidence 34455667777777777766655543 3457899999999976 566789999999997632 22333
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE-EEEEECCCcEEEEeCCCC
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL-LASGSDDGSVKLWSINQA 693 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~-l~sgs~D~~v~lWd~~~~ 693 (712)
.....+..+.|++.....++++..++.+.+||..+++.+..+..+ ..+.++.|+| ++.. +++++.|+.+.+|+..++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-dg~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T d1l0qa2 71 PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTK 148 (301)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTT
T ss_pred eccccccccccccccccccccccccceeeecccccceeeeecccc-ccceEEEeec-CCCeeeeeeccccceeeeecccc
Confidence 344567899999954446667778889999999999988888754 5668899998 6665 456667999999999999
Q ss_pred cEEEEEe
Q 005147 694 ILLLHLV 700 (712)
Q Consensus 694 ~~v~~~~ 700 (712)
..+..+.
T Consensus 149 ~~~~~~~ 155 (301)
T d1l0qa2 149 AVINTVS 155 (301)
T ss_dssp EEEEEEE
T ss_pred ceeeecc
Confidence 8887654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.03 E-value=2.9e-10 Score=121.86 Aligned_cols=112 Identities=6% Similarity=-0.140 Sum_probs=88.5
Q ss_pred CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE---
Q 005147 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--- 655 (712)
Q Consensus 579 ~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~--- 655 (712)
..-++++++.|++|+|||+.+. ..+..+.....+..|+|+| ++++|++++.||+|++||+.++++...
T Consensus 31 ~~~~~V~~~~dg~v~vwD~~t~--------~~~~~l~~g~~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i 101 (426)
T d1hzua2 31 PNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEI 101 (426)
T ss_dssp GGEEEEEETTTTEEEEEETTTC--------SEEEEEECCSSEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CeEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEE
Confidence 3346788889999999999763 2233344445699999999 699999999999999999998875433
Q ss_pred --eccCCCcEEEEEEecCCCCEE-EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 656 --MREHERRVWSIDFSSADPTLL-ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 656 --~~~H~~~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+|...+.+++|+| ||+++ ++++.|+.+++||..++.++..+.
T Consensus 102 ~~~~~~~~~~~s~~~sp-DG~~l~v~~~~~~~v~i~d~~~~~~~~~~~ 148 (426)
T d1hzua2 102 KIGIEARSVESSKFKGY-EDRYTIAGAYWPPQFAIMDGETLEPKQIVS 148 (426)
T ss_dssp ECCSEEEEEEECCSTTC-TTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred eCCCCCcceEEeeeecC-CCCEEEEeecCCCeEEEEcCCccceeEEee
Confidence 346778888999998 88875 555689999999999988876554
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.03 E-value=4.4e-10 Score=120.35 Aligned_cols=141 Identities=11% Similarity=0.057 Sum_probs=92.9
Q ss_pred CCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccce-EEecCCC
Q 005147 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRS 618 (712)
Q Consensus 540 ~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~-~~~~~~~ 618 (712)
..+|.+.+|+..+++++..+. +...+.+++|+|||+++++++.|++|++||+.+..... ...+ ...+|..
T Consensus 39 ~~dg~v~vwD~~t~~~~~~l~------~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~---~~~i~~~~~~~~ 109 (426)
T d1hzua2 39 RDAGQIALVDGDSKKIVKVID------TGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK---VAEIKIGIEARS 109 (426)
T ss_dssp TTTTEEEEEETTTCSEEEEEE------CCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE---EEEEECCSEEEE
T ss_pred cCCCEEEEEECCCCcEEEEEe------CCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeE---EEEEeCCCCCcc
Confidence 344444444444444443333 23568999999999999999999999999998742111 0001 1123445
Q ss_pred CeEEEEEcCCCCCEE-EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCC
Q 005147 619 KLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSIN 691 (712)
Q Consensus 619 ~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~ 691 (712)
.+.+++|+| +++++ +++..+++|.+||..++.++..+..|...+..+.|.+ ++. ..+.++.|+...+|...
T Consensus 110 ~~~s~~~sp-DG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s~d~~~~~~~~~ 182 (426)
T d1hzua2 110 VESSKFKGY-EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP-EPRVAAIIASHEHPEFIVNVK 182 (426)
T ss_dssp EEECCSTTC-TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEES-CCCEEEEEECSSSSEEEEEET
T ss_pred eEEeeeecC-CCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecC-CCceeEEEECCCCCEEEEecC
Confidence 566778888 57765 5556899999999999999999888877666666665 333 44555556655555444
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.02 E-value=1.1e-08 Score=101.96 Aligned_cols=158 Identities=10% Similarity=0.030 Sum_probs=110.7
Q ss_pred ccceecccCCCCCCcE-EEEEcCCcE-EEEEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCC-CcEEEEEcCCcccc
Q 005147 530 EGRRSGWINPFLEGLC-KYLSFSKLR-VKADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINE 603 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~-~~~~~~~~~-v~~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d-~~I~iwD~~~~~~~ 603 (712)
......| ..++.. .+....+.. .+|+..++... .+...+..+.|+|++..+++++.+ +.+.+|+....
T Consensus 117 ~~~~~~~---~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 190 (301)
T d1l0qa2 117 SPLGLAL---SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--- 190 (301)
T ss_dssp SEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---
T ss_pred cceEEEe---ecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccce---
Confidence 3344555 334433 333333333 44888776644 356778899999999988777765 56667776431
Q ss_pred CcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-EEE
Q 005147 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN---FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-ASG 679 (712)
Q Consensus 604 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs---~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~sg 679 (712)
...........+..++|++. +..++.++ .+++|.+||+.+++.+.++.. ...+++++|+| ||++| +++
T Consensus 191 -----~~~~~~~~~~~~~~~~~~~~-g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~va~sp-dg~~l~va~ 262 (301)
T d1l0qa2 191 -----SVIDTVKVEAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTP-DGKKVYVAL 262 (301)
T ss_dssp -----EEEEEEECSSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECT-TSSEEEEEE
T ss_pred -----eeeecccccCCcceeecccc-ccccccccccceeeeeeeeecCCCeEEEEEcC-CCCEEEEEEeC-CCCEEEEEE
Confidence 12233344556788999984 66665543 447899999999999988875 45689999998 88865 788
Q ss_pred ECCCcEEEEeCCCCcEEEEEec
Q 005147 680 SDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 680 s~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+.|++|++||+.+++.+.++--
T Consensus 263 ~~~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 263 SFCNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEECCCCeEEEEEeC
Confidence 8999999999999999887753
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.02 E-value=3.2e-10 Score=122.02 Aligned_cols=114 Identities=7% Similarity=-0.117 Sum_probs=90.3
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE----
Q 005147 577 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV---- 652 (712)
Q Consensus 577 ~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~---- 652 (712)
+++.-++++.+.|++|.|||..+.. .+..+.....+..++|+| +++++++++.||+|++||+.+++.
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~~--------v~~~~~~g~~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~~~~~~ 99 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTYE--------IKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVA 99 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCC--------EEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred CCCcEEEEEEcCCCEEEEEECCCCc--------EEEEEeCCCCeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCCceEEE
Confidence 3333456999999999999997732 222333334699999999 699999999999999999988753
Q ss_pred -EEEeccCCCcEEEEEEecCCCCE-EEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 653 -LTEMREHERRVWSIDFSSADPTL-LASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 653 -~~~~~~H~~~v~sv~fsp~~~~~-l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+....+|.+.++++.|+| ||++ +++++.|++|++||..+++++..+.
T Consensus 100 ~i~~~~~~~~~~~s~~~Sp-DG~~l~vs~~~~~~v~i~d~~t~~~~~~~~ 148 (432)
T d1qksa2 100 EIKIGSEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148 (432)
T ss_dssp EEECCSEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred EEecCCCCCCeEEecccCC-CCCEEEEEcCCCCeEEEEeCccccceeeec
Confidence 333456778888889998 8886 5889999999999999999887764
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.94 E-value=9.6e-09 Score=104.50 Aligned_cols=83 Identities=5% Similarity=0.055 Sum_probs=67.7
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.+...+.++.+++. +.+++++.. +.|.+||..+++.+..+. +...+++++|+| ||+++++|+.|+.|++||+.+++
T Consensus 249 ~~~~~~~~~~~~~~-~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~-DG~~l~v~~~d~~v~v~D~~t~~ 324 (346)
T d1jmxb_ 249 DLTELYFTGLRSPK-DPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLE 324 (346)
T ss_dssp ECSSCEEEEEECSS-CTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSCCCEEEECS-SSSCEEEESBSSEEEEEETTTTE
T ss_pred cccceeEEEEEeCC-CCEEEEecC-CeEEEEECCCCcEEEEEc-CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECccCC
Confidence 34556677888885 445555543 579999999999998876 556799999998 99999999999999999999999
Q ss_pred EEEEEec
Q 005147 695 LLLHLVD 701 (712)
Q Consensus 695 ~v~~~~~ 701 (712)
.+.++-.
T Consensus 325 ~i~~i~~ 331 (346)
T d1jmxb_ 325 KVKNIKL 331 (346)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9987754
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.88 E-value=5.6e-09 Score=105.88 Aligned_cols=153 Identities=10% Similarity=0.038 Sum_probs=106.6
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
....++.+.+|+..+.+++..+... .+...+.+++|+|||+++ ++++.++.|.+||+.++...... .. .....+
T Consensus 6 t~~~d~~v~v~D~~s~~~~~~i~~~---~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~-~~-~~~~~~ 80 (337)
T d1pbyb_ 6 APARPDKLVVIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI-DL-STPEER 80 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECT---TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE-EC-CBTTEE
T ss_pred EEcCCCEEEEEECCCCeEEEEEECC---CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEE-ec-CCCccc
Confidence 3445666666666666665554321 234567899999999976 56678999999999873211100 00 000011
Q ss_pred CCCeEEEEEcCCCCCEEEEEe------------CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 617 RSKLSSICWNSYIKSQIASSN------------FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs------------~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
...+..++|+| ++.++++++ .++.+.+||..++..+..+.. ...+.+++|+| ++.++++++.|
T Consensus 81 ~~~~~~v~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~-- 155 (337)
T d1pbyb_ 81 VKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGLGRD-- 155 (337)
T ss_dssp EECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEESSS--
T ss_pred ccceeeEEEcC-CCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-cCCceEEEEcC-CCCEEEEEcCC--
Confidence 22345789999 577777765 467899999999999988874 46688899998 99999988754
Q ss_pred EEEEeCCCCcEEEEEe
Q 005147 685 VKLWSINQAILLLHLV 700 (712)
Q Consensus 685 v~lWd~~~~~~v~~~~ 700 (712)
+.+||..+++.+..+.
T Consensus 156 ~~~~d~~~~~~~~~~~ 171 (337)
T d1pbyb_ 156 LHVMDPEAGTLVEDKP 171 (337)
T ss_dssp EEEEETTTTEEEEEEC
T ss_pred cceeeeecCcEEEEee
Confidence 7889999998887664
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=2.7e-08 Score=100.93 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=93.8
Q ss_pred ecCCCCeeEEEEcCCCCEEEEE-eCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC-CCcE
Q 005147 565 LNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EGVV 642 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~-~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~-Dg~V 642 (712)
..|.+.|.+|+|+|||++|+++ ..|+.|++|++..... .........+...+.+++|+| ++++|+++++ ++.|
T Consensus 33 ~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~----~~~~~~~~~~~~~p~~l~~sp-Dg~~l~v~~~~~~~v 107 (333)
T d1ri6a_ 33 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG----ALTFAAESALPGSLTHISTDH-QGQFVFVGSYNAGNV 107 (333)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC----CEEEEEEEECSSCCSEEEECT-TSSEEEEEETTTTEE
T ss_pred EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCC----cEEEeeecccCCCceEEEEcC-CCCEEeecccCCCce
Confidence 3578899999999999987554 4689999999865211 111223344556678899999 5888888875 6789
Q ss_pred EEEECCCCcEE--EEeccCCCcEEEEEEecCCCCEEEEEEC-CCcEEEEeCCCCcEEEE
Q 005147 643 QVWDVSRSQVL--TEMREHERRVWSIDFSSADPTLLASGSD-DGSVKLWSINQAILLLH 698 (712)
Q Consensus 643 ~lwD~~~~~~~--~~~~~H~~~v~sv~fsp~~~~~l~sgs~-D~~v~lWd~~~~~~v~~ 698 (712)
.+|+....... .....|...+.++.|+| ++.++++++. +..|.+|+.........
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-d~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (333)
T d1ri6a_ 108 SVTRLEDGLPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVA 165 (333)
T ss_dssp EEEEEETTEEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred eeeccccccceecccccCCCccceEEEeee-cceeeeccccccceeeEEEeccCCccee
Confidence 99998776543 33456778889999998 8887777774 66799999877654443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.65 E-value=3.9e-08 Score=99.79 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=88.6
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECCCCcE
Q 005147 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQV 652 (712)
Q Consensus 574 i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~~~~~ 652 (712)
++|++++++|++++.|++|.+||+.+... .......+...+.+++|+| ++.++ ++++.++.|.+||+.+++.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~------~~t~~~~~~~~p~~l~~sp-DG~~l~v~~~~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTV------YKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEE------EEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCE------EEEEEcCCCCCcceEEECC-CCCEEEEEECCCCcEEEEeCccCee
Confidence 46899999999999999999999976210 0112345666788999999 57765 6667899999999999998
Q ss_pred EEEeccCC------CcEEEEEEecCCCCEEEEEE------------CCCcEEEEeCCCCcEE
Q 005147 653 LTEMREHE------RRVWSIDFSSADPTLLASGS------------DDGSVKLWSINQAILL 696 (712)
Q Consensus 653 ~~~~~~H~------~~v~sv~fsp~~~~~l~sgs------------~D~~v~lWd~~~~~~v 696 (712)
+.++.... ..+..++|+| ||.+++.++ .++.+.+||..+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~s~-DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 135 (346)
T d1jmxb_ 75 TFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 135 (346)
T ss_dssp EEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred eeeecccccccccCCceEEEEEec-CCCEEEEEecCCcceeeeeccCcceEEEEecccceee
Confidence 88775432 2456899998 898887665 4788999998876654
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.64 E-value=5.5e-07 Score=92.89 Aligned_cols=127 Identities=11% Similarity=-0.007 Sum_probs=84.3
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc---c--ccceEEecCCCCeEEEEEcCC---------CCCEEEEE
Q 005147 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD---I--HYPVVEMASRSKLSSICWNSY---------IKSQIASS 636 (712)
Q Consensus 571 V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~---~--~~~~~~~~~~~~v~~v~~~p~---------~~~~lasg 636 (712)
...+.+++++. ++..+.++++.+|+.....-.... . ...............++++|. .+..+++.
T Consensus 216 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 294 (373)
T d2madh_ 216 TQPAQANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred eeeEEECCCce-EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEee
Confidence 34556666654 455578899999998752100000 0 000000011112223344442 23455667
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC--EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~--~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..++.|.+||..+++.+..+. +...+.+++|+| ||+ ++++++.|++|++||+.+++.+.++.
T Consensus 295 ~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~sp-DG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~ 358 (373)
T d2madh_ 295 AAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred cCCCeEEEEECCCCcEEEEec-CCCCeeEEEECC-CCCEEEEEEeCCCCeEEEEECCCCCEEEEEC
Confidence 778899999999999998876 678899999998 887 46789999999999999999987775
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=2.3e-07 Score=93.77 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=80.9
Q ss_pred EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE-EeCCCcEEEEECCCCcEEEEe---c
Q 005147 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS-SNFEGVVQVWDVSRSQVLTEM---R 657 (712)
Q Consensus 582 ~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las-gs~Dg~V~lwD~~~~~~~~~~---~ 657 (712)
.+++++.|++|++||+... .....+....+...+.+|+|+| ++++|++ +..|+.|.+|++.......++ .
T Consensus 6 v~v~~~~~~~I~v~~~~~~-----~~l~~~~~~~~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~ 79 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHE-----GALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 79 (333)
T ss_dssp EEEEEGGGTEEEEEEECTT-----SCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEECCCCCcEEEEEEcCC-----CCeEEEEEEcCCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec
Confidence 4678889999999999641 1123344567888999999999 5887754 556899999999866433332 2
Q ss_pred cCCCcEEEEEEecCCCCEEEEEEC-CCcEEEEeCCCCcEEEE
Q 005147 658 EHERRVWSIDFSSADPTLLASGSD-DGSVKLWSINQAILLLH 698 (712)
Q Consensus 658 ~H~~~v~sv~fsp~~~~~l~sgs~-D~~v~lWd~~~~~~v~~ 698 (712)
.+...+..++|+| ||++|++++. ++.|.+|+.........
T Consensus 80 ~~~~~p~~l~~sp-Dg~~l~v~~~~~~~v~~~~~~~~~~~~~ 120 (333)
T d1ri6a_ 80 ALPGSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGV 120 (333)
T ss_dssp ECSSCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred ccCCCceEEEEcC-CCCEEeecccCCCceeeeccccccceec
Confidence 3455677899998 9998888874 77899999876655433
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.49 E-value=1.5e-07 Score=96.38 Aligned_cols=131 Identities=12% Similarity=0.065 Sum_probs=91.3
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc---ccc--eEEecCCCCeEEEEEcCCCCCEEEEEeCC--
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI---HYP--VVEMASRSKLSSICWNSYIKSQIASSNFE-- 639 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---~~~--~~~~~~~~~v~~v~~~p~~~~~lasgs~D-- 639 (712)
+...+....+.+++..++.++.++++++|++.......... +.. ............++++| ++..++....+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-d~~~~~~~~~~~~ 271 (355)
T d2bbkh_ 193 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRD 271 (355)
T ss_dssp TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECC
T ss_pred ecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeC-CCCeEEEEeccCC
Confidence 45556677888888899999999999999997631100000 000 00000011234578888 46665554433
Q ss_pred --------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC--EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 640 --------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 --------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~--~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..|.+||..+++.+.++. +...+++++|+| ||+ ++++++.|++|.+||+++++.+.++-
T Consensus 272 ~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~sp-DG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 272 EWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVN 340 (355)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred ceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcC-CCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence 369999999999998886 446689999998 886 56788889999999999999998774
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.47 E-value=2.3e-07 Score=99.80 Aligned_cols=115 Identities=11% Similarity=0.098 Sum_probs=85.1
Q ss_pred eecCCCCeeEEEEcCCCCEEEEEeC---------CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 564 LLNSSNLVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~~~~~lat~~~---------d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
+..|...|.++.|+|||++|+.++. ++.+.|||+.+... .....+...+..+.|+| +++.||
T Consensus 57 ~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~--------~~l~~~~~~~~~~~~SP-DG~~ia 127 (470)
T d2bgra1 57 FDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL--------ITEERIPNNTQWVTWSP-VGHKLA 127 (470)
T ss_dssp TTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--------CCSSCCCTTEEEEEECS-STTCEE
T ss_pred hhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc--------cccccCCcccccccccc-Ccceee
Confidence 3356788999999999999988754 46788999976321 22345677899999999 699998
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccC------------------CCcEEEEEEecCCCCEEEEEECCCc-EEEEe
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREH------------------ERRVWSIDFSSADPTLLASGSDDGS-VKLWS 689 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H------------------~~~v~sv~fsp~~~~~l~sgs~D~~-v~lWd 689 (712)
.. .++.+.+|+..+++..+....+ .+....+.||| ||+.||..+.|.+ |..|+
T Consensus 128 ~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-DGk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 128 YV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp EE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEE
T ss_pred Ee-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECC-CCCccceeEecCCcCceEE
Confidence 85 5678999999988766543322 23345678998 9999999987655 55554
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.45 E-value=2.8e-06 Score=87.33 Aligned_cols=145 Identities=10% Similarity=-0.071 Sum_probs=90.8
Q ss_pred CcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccceE
Q 005147 543 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 543 ~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
+.+.+++..+++++..+..+ ....+.|+|||.+|++++ .++.|.+||..+.............
T Consensus 47 ~~v~v~D~~tg~~~~~~~~~-------~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~ 119 (373)
T d2madh_ 47 IQQWVLDAGSGSILGHVNGG-------FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP 119 (373)
T ss_pred ceEEEEECCCCCEEEEEeCC-------CCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcc
Confidence 33445555566665554322 223689999999998875 4578999999873221110000000
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEE--eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 613 EMASRSKLSSICWNSYIKSQIASS--NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasg--s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
...-......+.|+|. +..++.. +.++.+.+||..+.+..... ....++.|+|.....+++++.|+++.+||.
T Consensus 120 ~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~ 194 (373)
T d2madh_ 120 RFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred eeEeccCCCcEEEEeC-CCcEEEEEEcCCCceEEeeccCCeEEEEe----ccceeEEEecCCCcEEEEEcCCCeEEEEEc
Confidence 0000112245788884 5544444 44678999999887765443 446788999844456789999999999999
Q ss_pred CCCcEEEEE
Q 005147 691 NQAILLLHL 699 (712)
Q Consensus 691 ~~~~~v~~~ 699 (712)
..+......
T Consensus 195 ~~~~~~~~~ 203 (373)
T d2madh_ 195 AGGAAGAGL 203 (373)
T ss_pred CCceeeEEE
Confidence 987776554
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.43 E-value=2.7e-07 Score=95.72 Aligned_cols=62 Identities=8% Similarity=-0.096 Sum_probs=51.3
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC--EEEEEECCCcEEEEeCCCCcEEEEEeceee
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQAILLLHLVDVSF 704 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~--~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~ 704 (712)
.|.+||..+++.+.++. +...+.+++|+| ||+ ++++++.|++|.+||..+++.+.++-.+..
T Consensus 295 ~v~v~D~~t~~~~~~~~-~~~~~~~~a~sp-DG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~ 358 (368)
T d1mdah_ 295 NTSSVTASVGQTSGPIS-NGHDSDAIIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp EEEEEESSSCCEEECCE-EEEEECEEEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred eEEEEECCCCcEeEEec-CCCceeEEEECC-CCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCCC
Confidence 48899999999988876 446789999998 875 467888899999999999999987754443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.14 E-value=1.3e-06 Score=93.80 Aligned_cols=120 Identities=12% Similarity=-0.010 Sum_probs=90.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---------CCCcEE
Q 005147 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN---------FEGVVQ 643 (712)
Q Consensus 573 ~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs---------~Dg~V~ 643 (712)
++.|.++++++.. .|+.|.+||+.++..... ........+...|.++.|+| |+++||.++ .++.+.
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~--~~~~~~~~~~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~~~ 95 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVF--LENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYD 95 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTCCEEEE--ECTTTTTTSSSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEE--EchhhhhhccCccceeEECC-CCCEEEEEECCcceeeeccCceEE
Confidence 5789998887764 478899999987432110 00011123456799999999 699888874 467889
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|||+.+++ +..+..|.+.+..+.||| ||+.+|..+ |+.+.+|+..++.......
T Consensus 96 l~d~~~~~-~~~l~~~~~~~~~~~~SP-DG~~ia~~~-~~~l~~~~~~~g~~~~~t~ 149 (470)
T d2bgra1 96 IYDLNKRQ-LITEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITW 149 (470)
T ss_dssp EEETTTTE-ECCSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCS
T ss_pred EEECCCCc-ccccccCCcccccccccc-CcceeeEee-cccceEEECCCCceeeeee
Confidence 99999887 456888999999999998 999999965 6789999999887765443
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.05 E-value=2.3e-05 Score=79.39 Aligned_cols=112 Identities=10% Similarity=-0.028 Sum_probs=70.4
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccc
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYP 610 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~ 610 (712)
..+.+.+|+..++++++.+.. +.+..++|+|||++|++++ .|+.|++||+.+...........
T Consensus 26 ~~~~v~v~D~~tg~~~~~~~~-------g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~ 98 (355)
T d2bbkh_ 26 AVTQQFVIDGEAGRVIGMIDG-------GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPD 98 (355)
T ss_dssp SSEEEEEEETTTTEEEEEEEE-------CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETT
T ss_pred CcCeEEEEECCCCcEEEEEEC-------CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCC
Confidence 344556667777776665543 2344799999999777643 47899999997632111000000
Q ss_pred eEEecCCCCeEEEEEcCCCCCEEEEEe--CCCcEEEEECCCCcEEEEeccCC
Q 005147 611 VVEMASRSKLSSICWNSYIKSQIASSN--FEGVVQVWDVSRSQVLTEMREHE 660 (712)
Q Consensus 611 ~~~~~~~~~v~~v~~~p~~~~~lasgs--~Dg~V~lwD~~~~~~~~~~~~H~ 660 (712)
............+.|+| ++..++.++ .+..+.+||..+++.+.++..+.
T Consensus 99 ~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (355)
T d2bbkh_ 99 APRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD 149 (355)
T ss_dssp CCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred cceeecCCCCceEEEec-CCCeeEEecCCCCceeeeeecCCCcEeeEEecCC
Confidence 00011123345689999 577766654 46789999999999988877554
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.68 E-value=2.9e-05 Score=79.89 Aligned_cols=119 Identities=10% Similarity=-0.072 Sum_probs=77.1
Q ss_pred eEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCC
Q 005147 572 CSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEG 640 (712)
Q Consensus 572 ~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg 640 (712)
..+.|+|||..|++++ .|+.|.+||..+.......................++|+| ++++|+.++ .++
T Consensus 68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~Sp-DGk~l~va~~~~~ 146 (368)
T d1mdah_ 68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSS 146 (368)
T ss_dssp CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSS
T ss_pred CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECC-CCCEEEEEeCCCC
Confidence 3589999999888765 4778999999763211100000000001122234689999 577777665 579
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
.|.+||+.+++.+..+..+..... .|.....++..+.||++.+|++.....
T Consensus 147 ~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~Dg~~~~~~~~~~~~ 197 (368)
T d1mdah_ 147 AAAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CEEEEEETTTEEEEEEECSSCCCC----EEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred eEEEEECCCCcEeEEeeccCcceE----ccCCCceEEEEcCCCCEEEEEecCCce
Confidence 999999999999988876554321 222356677778888888888765443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.66 E-value=0.00041 Score=71.27 Aligned_cols=141 Identities=7% Similarity=0.040 Sum_probs=84.7
Q ss_pred CCCeeEEEEcCCCCEEE-EEeCCCcEEEEEcCCccccCcccccceEE------------ecCCCCeEEEEEcCCCCCEEE
Q 005147 568 SNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVE------------MASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~la-t~~~d~~I~iwD~~~~~~~~~~~~~~~~~------------~~~~~~v~~v~~~p~~~~~la 634 (712)
......+.|+|+++++. +...+++|.+||+................ .........+.++| ++.+|+
T Consensus 192 g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~ly 270 (365)
T d1jofa_ 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMF 270 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEE
T ss_pred CCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECC-CCCEEE
Confidence 45678899999999764 44578999999986521110000000000 01122356789999 588877
Q ss_pred EEeC------CCcEEEEECCCCcEEE------EeccCCCcEEEEEEecCCCCEEEEE-ECCCcEEEEeCCCCcEEEEEec
Q 005147 635 SSNF------EGVVQVWDVSRSQVLT------EMREHERRVWSIDFSSADPTLLASG-SDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 635 sgs~------Dg~V~lwD~~~~~~~~------~~~~H~~~v~sv~fsp~~~~~l~sg-s~D~~v~lWd~~~~~~v~~~~~ 701 (712)
++.. .+.|..|++.....+. .........+.++|+|.+|++|+.+ ..++.|.+|+++.. .+..+..
T Consensus 271 vsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~-~l~~~~~ 349 (365)
T d1jofa_ 271 ASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE-FLHRVAR 349 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT-EEEEEEE
T ss_pred EEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC-cCcEEEE
Confidence 7643 2237778776432221 1122345678899998778866555 57899999988643 3444444
Q ss_pred eeeccCcee
Q 005147 702 VSFETKRTT 710 (712)
Q Consensus 702 ~~~~~~~~~ 710 (712)
...+.+++|
T Consensus 350 ~~vp~p~~~ 358 (365)
T d1jofa_ 350 VRIPEPGFG 358 (365)
T ss_dssp EECCSTTEE
T ss_pred EECCCCCCC
Confidence 455555554
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.51 E-value=0.00023 Score=74.64 Aligned_cols=140 Identities=10% Similarity=0.092 Sum_probs=86.0
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCC--EEEEEeCCCc-----------------EEEEEcC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE--LFAAAGVNKK-----------------IKVFECD 598 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~--~lat~~~d~~-----------------I~iwD~~ 598 (712)
+...++.+.+++.+++++...+. +.+.....++.|+|+|+ +++..+.+.. +..+|..
T Consensus 89 ~d~~~~rVavIDl~t~k~~~ii~----iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~ 164 (441)
T d1qnia2 89 NDKANTRVARIRLDIMKTDKITH----IPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAE 164 (441)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE----CTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETT
T ss_pred EcCCCCEEEEEECCCCcEeeEEe----cCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCc
Confidence 33444455555555554432221 12467788999999998 5555443321 2335554
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC---------------------------------------
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--------------------------------------- 639 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D--------------------------------------- 639 (712)
+. . ......-...+..+.|+| ++.++++++++
T Consensus 165 t~-----~---v~~qI~v~~~p~~v~~sp-dGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~ 235 (441)
T d1qnia2 165 TM-----D---VAWQVIVDGNLDNTDADY-TGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIG 235 (441)
T ss_dssp TC-----S---EEEEEEESSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred cc-----e---eeEEEecCCCccceEECC-CCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeC
Confidence 31 1 111112234567889998 57777776643
Q ss_pred --CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-EEEECCCcEEEEeCCC
Q 005147 640 --GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-ASGSDDGSVKLWSINQ 692 (712)
Q Consensus 640 --g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~ 692 (712)
+.+.|++......++.+..+.. ...++++| ||+++ ++|..|++|.|||+.+
T Consensus 236 ~~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSP-DGkyl~~~~~~~~tvsv~d~~k 289 (441)
T d1qnia2 236 DSKVPVVDGRGESEFTRYIPVPKN-PHGLNTSP-DGKYFIANGKLSPTVSVIAIDK 289 (441)
T ss_dssp TCCCCEEECSSSCSSEEEECCBSS-CCCEEECT-TSCEEEEECTTSSBEEEEEGGG
T ss_pred CCCcEEEEcccCCceEEEEeCCCC-ccCceECC-CCCEEEEeCCcCCcEEEEEeeh
Confidence 4566666666667777776544 57899998 88865 6677899999999865
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.002 Score=61.94 Aligned_cols=190 Identities=11% Similarity=-0.030 Sum_probs=98.4
Q ss_pred ccccccCCCCCCCCccccCCCC----------CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE--EEccCCce
Q 005147 497 VRHSQLSSDGRTSKPLVNERSS----------INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK--ADLNQGDL 564 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~~----------~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~dl~~~~~ 564 (712)
+.+-.|||||+.++........ .....+..+.+......| ++-...++........... +.......
T Consensus 41 ~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~i~~~~~~~~~~~~~~~~~~~~~~ 119 (269)
T d2hqsa1 41 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF-SPDGSKLAFALSKTGSLNLYVMDLASGQI 119 (269)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE-CTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred eeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeeccccccee-cCCCCeeeEeeecCCccceeecccccccc
Confidence 4567899999998655433321 111223334444445555 3322222222222222222 21111111
Q ss_pred e---cCCCCeeEEEEcCCCCE-EEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe-CC
Q 005147 565 L---NSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 639 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~~~-lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~D 639 (712)
. ..........+++++.. +++...++...||...... .................|+|+ +..++..+ ..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~~ 192 (269)
T d2hqsa1 120 RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING------GAPQRITWEGSQNQDADVSSD-GKFMVMVSSNG 192 (269)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS------SCCEECCCSSSEEEEEEECTT-SSEEEEEEECS
T ss_pred eeeeeccccccccccccccccceecccccCCceEeeeeccc------ccceeeecccccccccccccc-cceeEEEeecC
Confidence 1 23444455667777764 4444455554555443211 111222234556677899995 66555554 45
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC---CCcEEEEeCCCCcE
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD---DGSVKLWSINQAIL 695 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~---D~~v~lWd~~~~~~ 695 (712)
|...+|.............+........|+| ||+.||-.+. ...|.+|++..+..
T Consensus 193 ~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SP-DG~~i~f~s~~~~~~~l~~~~~dg~~~ 250 (269)
T d2hqsa1 193 GQQHIAKQDLATGGVQVLSSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFK 250 (269)
T ss_dssp SCEEEEEEETTTCCEEECCCSSSCEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred CceeeeEeecccccceEeecCccccceEECC-CCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence 5555554443322334445667778899998 9998876654 34688999986654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.35 E-value=0.0037 Score=61.03 Aligned_cols=142 Identities=13% Similarity=0.191 Sum_probs=98.3
Q ss_pred CCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
.+|.+.++.....++..--.+++++ .+......++++++++++++....+.|++||.... .....
T Consensus 123 ~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~---------~~~~~ 193 (279)
T d1q7fa_ 123 NKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQI 193 (279)
T ss_dssp TTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEE
T ss_pred cCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeeccccceeeeecCCc---------eeeee
Confidence 3455566665555544222233332 24567788999999999999899999999997531 12222
Q ss_pred c---CCCCeEEEEEcCCCCCEEEEEeC-CCcEEEEECCCCcEEEEeccC--CCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 615 A---SRSKLSSICWNSYIKSQIASSNF-EGVVQVWDVSRSQVLTEMREH--ERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 615 ~---~~~~v~~v~~~p~~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~H--~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
+ .-.....|++.| +++++++-.. ++.|.+|| .+|+.+.++... ....+.|++.| ++.++++ +.+++|++|
T Consensus 194 g~~g~~~~P~giavD~-~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~-dG~l~V~-~~n~~v~~f 269 (279)
T d1q7fa_ 194 GGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIY 269 (279)
T ss_dssp SCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEE
T ss_pred cccccccCCccccccc-CCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeC-CCcEEEE-eCCCeEEEE
Confidence 2 334577899999 5787776554 45799998 568888777543 34689999997 8876664 578999999
Q ss_pred eCCCCcE
Q 005147 689 SINQAIL 695 (712)
Q Consensus 689 d~~~~~~ 695 (712)
...+..+
T Consensus 270 r~~~~~~ 276 (279)
T d1q7fa_ 270 RYVQLAP 276 (279)
T ss_dssp ECSCCCC
T ss_pred EeeeecC
Confidence 9887654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.26 E-value=0.0027 Score=62.78 Aligned_cols=117 Identities=19% Similarity=0.161 Sum_probs=89.6
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.+.+++++|||+++++...+++|..||.... ..........+.+++|.| ++++++++..++.+.+|+...
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~---------~~~~~~~~~~~~gla~~~-dG~l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN---------QQIHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVK 98 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC---------EEEEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC---------EEEEEcCCCCcceEEEcC-CCCeEEEecCCceEEEEEecc
Confidence 5789999999999999999999988886431 122344557789999999 589999998889998888754
Q ss_pred C--cEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 650 S--QVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 650 ~--~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
. ...... .......+.+.+.+ ++.++++-+.++.+..+|...+....
T Consensus 99 ~~~~~~~~~~~~~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~~~~~~ 148 (302)
T d2p4oa1 99 SDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSI 148 (302)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccceeeccccCCccccceeEEcc-CCCEEeeccccccceeeeccCCccee
Confidence 3 222111 22456789999997 89999999999999999988775443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.11 E-value=0.0099 Score=60.42 Aligned_cols=123 Identities=7% Similarity=-0.010 Sum_probs=76.7
Q ss_pred CCCeeEEEEcCCCCEEEEEeC-CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVW 645 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~-d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lw 645 (712)
...+.++.|+|||++++++.. ..+|.+|+..... ...................+.|+|. ++++ ++...+++|.+|
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g--~~~~~~~~~~~~~g~gPr~i~f~pd-g~~~yv~~e~~~~V~v~ 220 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG--EVELVGSVDAPDPGDHPRWVAMHPT-GNYLYALMEAGNRICEY 220 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CEEEEEEEECSSTTCCEEEEEECTT-SSEEEEEETTTTEEEEE
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCC--ceeeccceeecCCCCceEEEEECCC-CceEEEeccCCCEEEEE
Confidence 445789999999997777654 5678888865311 1111111222234567889999995 6655 555578899999
Q ss_pred ECCCCcE--EEEec-----------------cCCCcEEEEEEecCCCCEEEEEE-CCCc-----EEEEeCCCCc
Q 005147 646 DVSRSQV--LTEMR-----------------EHERRVWSIDFSSADPTLLASGS-DDGS-----VKLWSINQAI 694 (712)
Q Consensus 646 D~~~~~~--~~~~~-----------------~H~~~v~sv~fsp~~~~~l~sgs-~D~~-----v~lWd~~~~~ 694 (712)
|+..++. +.... .+......+.++| ||.+|+++. .+.. |..|++....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~lyvsnr~~~~~~~~~i~~~~~~~~g 293 (365)
T d1jofa_ 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred EecCCCceEEEEeeeeccccccccccccccccccCCccceEECC-CCCEEEEEcccCCCccceEEEEEEecCCC
Confidence 9876542 22111 1223466789998 888876653 2333 7777765443
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=96.65 E-value=0.0005 Score=71.92 Aligned_cols=129 Identities=15% Similarity=0.164 Sum_probs=87.1
Q ss_pred eeEEEEcCCCCEE-EEEeCCCcEEEEEcCCcccc---Cccc-ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 571 VCSLSFDRDGELF-AAAGVNKKIKVFECDAIINE---NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 571 V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~---~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
...+.++|||+++ +++..|++|.|||+.+.... .... ...+.+....-.....+|.+ +++.+.|...|..|..|
T Consensus 260 PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~-~g~~yts~~~ds~v~kw 338 (441)
T d1qnia2 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDG-RGNAYTTLFIDSQVCKW 338 (441)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETTTTEEEEE
T ss_pred ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecC-CceEEEcccccceEEEe
Confidence 4568999999976 55668999999999763211 1111 11112222233345678998 58888888999999999
Q ss_pred ECCC---------Cc-EEEEe-----ccCCCcEEEEEEecCCCCEEEEE---ECCCcE----------EEEeCCCCcEEE
Q 005147 646 DVSR---------SQ-VLTEM-----REHERRVWSIDFSSADPTLLASG---SDDGSV----------KLWSINQAILLL 697 (712)
Q Consensus 646 D~~~---------~~-~~~~~-----~~H~~~v~sv~fsp~~~~~l~sg---s~D~~v----------~lWd~~~~~~v~ 697 (712)
++.. .. .+..+ .+|...+.+..|+| ||++|+|+ |.|+.+ .|.|+. |....
T Consensus 339 ~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~p-dGk~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~-~~~~~ 416 (441)
T d1qnia2 339 NIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDA-DGKWLVVLSKFSKDRFLPVGPLHPENDQLIDIS-GEEMK 416 (441)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTC-CCCEEEEEESCCGGGSCCCSSSCCEEEEEEECS-SSSCE
T ss_pred ccchhhhhhccCCCceeEeccccccCCCCCccccccccCC-CCcEEEecCccccccCcCCCCCCCccceeEEec-CCeEE
Confidence 9741 11 23333 58888889999998 99999999 667664 567886 45554
Q ss_pred EEece
Q 005147 698 HLVDV 702 (712)
Q Consensus 698 ~~~~~ 702 (712)
.+.++
T Consensus 417 ~~~~~ 421 (441)
T d1qnia2 417 LVHDG 421 (441)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 44444
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.53 E-value=0.07 Score=51.39 Aligned_cols=122 Identities=11% Similarity=0.145 Sum_probs=88.8
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
.....++++++++.++++....+.+.++|..... ...+-...+-.....+++.+ +++++++....+.|.+||.
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~------~~~~g~~~~~~~~~~i~~d~-~g~i~v~d~~~~~V~~~d~ 185 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV------LHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNY 185 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE------EEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEET
T ss_pred ccccceeccccCCcEEEEeeccceeeEeccCCce------eecccccccccccceeeecc-ceeEEeeeccccceeeeec
Confidence 4556789999999988888888888888864310 01111223455678899988 5788888888999999996
Q ss_pred CCCcEEEEec--cCCCcEEEEEEecCCCCEEEEEEC-CCcEEEEeCCCCcEEEEE
Q 005147 648 SRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSD-DGSVKLWSINQAILLLHL 699 (712)
Q Consensus 648 ~~~~~~~~~~--~H~~~v~sv~fsp~~~~~l~sgs~-D~~v~lWd~~~~~~v~~~ 699 (712)
+++.+.++- ++......|++.| +++++++-+. ++.|.+|+. +|+.+.++
T Consensus 186 -~G~~~~~~g~~g~~~~P~giavD~-~G~i~Vad~~~~~~v~~f~~-~G~~~~~~ 237 (279)
T d1q7fa_ 186 -EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISAL 237 (279)
T ss_dssp -TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEE
T ss_pred -CCceeeeecccccccCCccccccc-CCeEEEEECCCCcEEEEECC-CCCEEEEE
Confidence 577777773 4556788999997 8898887654 557999985 47766554
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.40 E-value=0.1 Score=50.75 Aligned_cols=147 Identities=12% Similarity=0.067 Sum_probs=100.4
Q ss_pred CCCCcEEEEEcCCcEEE-EEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 540 FLEGLCKYLSFSKLRVK-ADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 540 ~~~~~~~~~~~~~~~v~-~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
..||.+.+++....+|+ ++.. +.. ......+.+++|+++|+++++...++.+..|+.... ......+....
T Consensus 36 ~pdG~l~vt~~~~~~I~~i~p~-g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 110 (302)
T d2p4oa1 36 APDGTIFVTNHEVGEIVSITPD-GNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS----DGTVETLLTLP 110 (302)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-CCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT----TSCEEEEEECT
T ss_pred CCCCCEEEEeCCCCEEEEEeCC-CCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccc----ccceeeccccC
Confidence 45777777777777765 4432 332 235678899999999999999888889988887541 11122333444
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec----------cCCCcEEEEEEecCCCCEEEEEECCCcE
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR----------EHERRVWSIDFSSADPTLLASGSDDGSV 685 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~----------~H~~~v~sv~fsp~~~~~l~sgs~D~~v 685 (712)
.....+.+.+.+ +++++++.+.++.+..+|...+....... .....++.+.+. ...++++.+..+.|
T Consensus 111 ~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~~~~~~~i 187 (302)
T d2p4oa1 111 DAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNTEKMLL 187 (302)
T ss_dssp TCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEETTTTEE
T ss_pred CccccceeEEcc-CCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc--CCceeeecCCCCeE
Confidence 566788999998 58888888889999999988775332211 112345677776 35677777778888
Q ss_pred EEEeCCCCc
Q 005147 686 KLWSINQAI 694 (712)
Q Consensus 686 ~lWd~~~~~ 694 (712)
..+++....
T Consensus 188 ~~~~~~~~~ 196 (302)
T d2p4oa1 188 LRIPVDSTD 196 (302)
T ss_dssp EEEEBCTTS
T ss_pred Eeccccccc
Confidence 888776543
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.38 E-value=0.065 Score=51.02 Aligned_cols=144 Identities=10% Similarity=0.120 Sum_probs=95.9
Q ss_pred CCCcEEEEEcCCcEEEEEcc-CCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 541 LEGLCKYLSFSKLRVKADLN-QGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~-~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
.++.+.++......+.+... .+... .......+|+++++++++++-..+..+..++...... ......-
T Consensus 66 ~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-------~~~~~~~ 138 (260)
T d1rwia_ 66 GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-------TVLPFTG 138 (260)
T ss_dssp TTCCEEEEETTTEEEEECTTCSCCEECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC-------EECCCCS
T ss_pred CCCCEEEeeeeeceeeeeeeccceeeeeeeeeeecccccccccceeEeecccccccccccccccee-------eeeeecc
Confidence 35555555555544443222 22211 1245678999999999888877777788877654111 1111122
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.....+++++| +++++++...++.|..+|.............-...+.|++.+ ++.++++....+.|..++....
T Consensus 139 ~~~p~~i~~~~-~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~-~g~l~vsd~~~~~i~~~~~~~~ 213 (260)
T d1rwia_ 139 LNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGST 213 (260)
T ss_dssp CCSCCEEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTTEEEEECTTCS
T ss_pred cCCcceeeecC-CCCEeeeccccccccccccccceeeeeeccccCCCccceeee-eeeeeeeecCCCEEEEEeCCCC
Confidence 34557899998 578888888889999999876544433334566779999997 8899999888888988887543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=96.31 E-value=0.011 Score=58.82 Aligned_cols=117 Identities=8% Similarity=0.100 Sum_probs=82.3
Q ss_pred eeEEEEcCCCC-----EEEEEeCCCcEEEEEcCCccccCcccccceEEe--cCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 571 VCSLSFDRDGE-----LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 571 V~~i~f~~~~~-----~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
-+.++|+++++ ++++-+..++|..||+..... .......... ......-.+++.+ +++++++....+.|.
T Consensus 174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~--~~~~~~~~~~~~~~~~~pdGiavD~-~GnlyVa~~~~g~I~ 250 (314)
T d1pjxa_ 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK--IENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIE 250 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE--EEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEE
T ss_pred eeeeEECCCCCcceeEEEEEeecccceEEeeccCccc--cceeeEEEEccccccccceeeEEec-CCcEEEEEcCCCEEE
Confidence 36789998765 556666788899998753111 0000011111 1122345789988 588888888889999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCC
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSIN 691 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~ 691 (712)
+||...++.+..+..+....++++|.| +++ ++++.+..+.|.-.++.
T Consensus 251 ~~dp~~g~~~~~i~~p~~~~t~~afg~-d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 251 VFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECS
T ss_pred EEeCCCCEEEEEEECCCCCEEEEEEeC-CCCEEEEEECCCCcEEEEECC
Confidence 999988887777777778889999998 775 77888888888887764
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.10 E-value=0.086 Score=50.09 Aligned_cols=141 Identities=11% Similarity=0.063 Sum_probs=90.8
Q ss_pred CCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 541 LEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
.++.+.+......++. .+....... .......+|+++++++++++...++.|..||...... ......
T Consensus 107 ~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~-------~~~~~~ 179 (260)
T d1rwia_ 107 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-------VVLPFT 179 (260)
T ss_dssp TTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCE-------EECCCS
T ss_pred ccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccccccee-------eeeecc
Confidence 3555555555554443 333221111 1134557899999999999888889999999864211 011123
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.-.....|++.+ +++++++....+.|..++...... ..+ ...-.....|++++ ++.++++-..+++|+..+..
T Consensus 180 ~~~~p~gi~~d~-~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d~-~g~l~vad~~~~rI~~i~~~ 253 (260)
T d1rwia_ 180 DITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSL 253 (260)
T ss_dssp SCCSEEEEEECT-TCCEEEEETTTTEEEEECTTCSCC-EECCCCSCCCEEEEEECT-TCCEEEEEGGGTEEEEECCC
T ss_pred ccCCCccceeee-eeeeeeeecCCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEeC-CCCEEEEECCCCEEEEEeCC
Confidence 345568899998 578888887888888888654432 222 22335678999997 88988887777777766554
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=94.72 E-value=0.12 Score=50.72 Aligned_cols=109 Identities=12% Similarity=0.112 Sum_probs=71.3
Q ss_pred CCeeEEEEcCCCCE-EEEEeCCCcEEEEEcCCccccCcccccc-eEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 569 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~~-lat~~~d~~I~iwD~~~~~~~~~~~~~~-~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
..-+.|+|+|+++. +++-+..++|..||+............. ..........-.+++.+ +++++++....+.|.+||
T Consensus 177 ~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~-~G~l~Va~~~~g~V~~~~ 255 (319)
T d2dg1a1 177 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFN 255 (319)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEEC
T ss_pred ceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcC-CCCEEEEEcCCCEEEEEC
Confidence 34467999999985 4666678999999986421100000000 11111122356789998 589888888899999999
Q ss_pred CCCCcEEEEec------cCCCcEEEEEEecCCCCEEEEEE
Q 005147 647 VSRSQVLTEMR------EHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 647 ~~~~~~~~~~~------~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
.+|+.+.++. ++...+++++|.| +...++..+
T Consensus 256 -p~G~~l~~i~~P~~~~~~~~~~~~~~~~~-~~~~~~~t~ 293 (319)
T d2dg1a1 256 -KRGYPIGQILIPGRDEGHMLRSTHPQFIP-GTNQLIICS 293 (319)
T ss_dssp -TTSCEEEEEECTTGGGTCSCBCCEEEECT-TSCEEEEEE
T ss_pred -CCCcEEEEEeCCCcCCCcCceeeeEEEeC-CCCEEEEEc
Confidence 5798888774 3445688999997 555444433
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=94.57 E-value=0.79 Score=44.54 Aligned_cols=151 Identities=11% Similarity=0.106 Sum_probs=88.5
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCC--CcEEEEEcCCccccC
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVN--KKIKVFECDAIINEN 604 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d--~~I~iwD~~~~~~~~ 604 (712)
.++.| -.+|.+.+.+...+++. ++...+... ........++|+++|+++++...+ ....++.+.....
T Consensus 43 EG~~~---D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~-- 117 (319)
T d2dg1a1 43 EGLNF---DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD-- 117 (319)
T ss_dssp EEEEE---CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC--
T ss_pred EeCEE---CCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc--
Confidence 45666 35666677777777765 666554322 345567899999999988876432 3334444332100
Q ss_pred cccccceEE-ecCCCCeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EE
Q 005147 605 RDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LL 676 (712)
Q Consensus 605 ~~~~~~~~~-~~~~~~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l 676 (712)
. ...... ......++.+.+.| +++++++.... +.+..+|... +.+..+...-...+.++|+| +++ +.
T Consensus 118 -~-~~~~~~~~~~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g~v~~~~~dg-~~~~~~~~~~~~pnGia~s~-dg~~ly 192 (319)
T d2dg1a1 118 -N-LQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDF-RTVTPIIQNISVANGIALST-DEKVLW 192 (319)
T ss_dssp -S-CEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTS-CCEEEEEEEESSEEEEEECT-TSSEEE
T ss_pred -e-eeeeccCCCcccCCcceeEEe-ccceeecccccccccCcceeEEEeccc-ceeEEEeeccceeeeeeecc-ccceEE
Confidence 0 011111 12234577899998 58776664321 2344455433 33333333344568899998 776 55
Q ss_pred EEEECCCcEEEEeCCC
Q 005147 677 ASGSDDGSVKLWSINQ 692 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~ 692 (712)
++-+..++|..||+..
T Consensus 193 vad~~~~~I~~~d~~~ 208 (319)
T d2dg1a1 193 VTETTANRLHRIALED 208 (319)
T ss_dssp EEEGGGTEEEEEEECT
T ss_pred EecccCCceEEEEEcC
Confidence 6667789999999864
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.77 E-value=0.08 Score=55.33 Aligned_cols=114 Identities=15% Similarity=0.018 Sum_probs=71.4
Q ss_pred CCeeEEEEcCCCCEEEEEe---------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC
Q 005147 569 NLVCSLSFDRDGELFAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~---------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D 639 (712)
-.+.+..|+||+++++.+. ..+.+.++|+.++..... .........+....|+| +++.||-.. +
T Consensus 61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l-----~~~~~~~~~l~~~~wSP-DG~~iafv~-~ 133 (465)
T d1xfda1 61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSL-----DPPEVSNAKLQYAGWGP-KGQQLIFIF-E 133 (465)
T ss_dssp TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEEC-----CCTTCCSCCCSBCCBCS-STTCEEEEE-T
T ss_pred cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeec-----cCccCCccccceeeecc-CCceEEEEe-c
Confidence 3567889999999877764 346788899876321110 00111234456689999 588887765 5
Q ss_pred CcEEEEECCCCcEEEEe-ccCCCcE-----------------EEEEEecCCCCEEEEEEC-CCcEEEEeC
Q 005147 640 GVVQVWDVSRSQVLTEM-REHERRV-----------------WSIDFSSADPTLLASGSD-DGSVKLWSI 690 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~-~~H~~~v-----------------~sv~fsp~~~~~l~sgs~-D~~v~lWd~ 690 (712)
+.|.+.+...+..++.. .+-...| ..+-||| ||+.||.... |..|..+.+
T Consensus 134 ~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSP-Dgk~iaf~~~D~s~V~~~~~ 202 (465)
T d1xfda1 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMEL 202 (465)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEE
T ss_pred ceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECC-CCCeEEEEEecccccceeec
Confidence 67888888776544332 2222212 4677998 9999998773 555655543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.76 E-value=0.032 Score=53.20 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=23.5
Q ss_pred ceeccCCCCceeecCCCcEEEEecccc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
++|+|+.|.||+++.++.+-++||+.+
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a 211 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred EEEeeccCcceeecCCceEEEeechhc
Confidence 589999999999987666679999877
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.57 E-value=0.51 Score=43.90 Aligned_cols=119 Identities=10% Similarity=0.103 Sum_probs=67.2
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCCc
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGV 641 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~---~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg~ 641 (712)
.+...+.+-+|||||+.||-..... .+.+.+... ........+.....+..|+|. +..++... .++.
T Consensus 36 ~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~spd-g~~i~~~~~~~~~ 106 (269)
T d2hqsa1 36 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN--------GAVRQVASFPRHNGAPAFSPD-GSKLAFALSKTGS 106 (269)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------CCEEEEECCSSCEEEEEECTT-SSEEEEEECTTSS
T ss_pred cCCCceeeeEECCCCCEEEEEEeeccCcceeeeeccc--------CceeEEeeeecccccceecCC-CCeeeEeeecCCc
Confidence 3467788999999999998765433 355555533 122344556778889999995 66666544 4444
Q ss_pred EEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEE--eCCCC
Q 005147 642 VQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW--SINQA 693 (712)
Q Consensus 642 V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW--d~~~~ 693 (712)
..++..... ........+........+++.....+++...++...+| ++..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~ 161 (269)
T d2hqsa1 107 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 161 (269)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred cceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccc
Confidence 444333222 22333333445555566775333344444455554444 44443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.20 E-value=0.92 Score=43.52 Aligned_cols=111 Identities=13% Similarity=0.133 Sum_probs=74.8
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceE-EecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 569 NLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
..-+.+.|+++++ ++++-+..+.|..|++............... ..........+++.. ++++.++.-..|.|..||
T Consensus 148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~-~GnlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYD 226 (295)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEEC
T ss_pred CCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcC-CCCEEeeeeCCCceEEec
Confidence 3446899999998 4556667889999998642111111111111 112344567889987 588888877788999999
Q ss_pred CCCCcEEEEeccCCCcEEEEEEecCCC-CEEEEEEC
Q 005147 647 VSRSQVLTEMREHERRVWSIDFSSADP-TLLASGSD 681 (712)
Q Consensus 647 ~~~~~~~~~~~~H~~~v~sv~fsp~~~-~~l~sgs~ 681 (712)
.+|+.+..+.--...+++++|--.+. .+++|.+.
T Consensus 227 -p~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~ 261 (295)
T d2ghsa1 227 -TDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 261 (295)
T ss_dssp -TTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred -CCCcEeeEecCCCCceEEEEEeCCCCCEEEEEECC
Confidence 57889988887778899999973354 46666543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.57 E-value=4.2 Score=38.50 Aligned_cols=149 Identities=10% Similarity=0.017 Sum_probs=92.8
Q ss_pred CCCCcEEEEEcCCcEEEEEccCCceec--------CCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCccc
Q 005147 540 FLEGLCKYLSFSKLRVKADLNQGDLLN--------SSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDI 607 (712)
Q Consensus 540 ~~~~~~~~~~~~~~~v~~dl~~~~~~~--------h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~~ 607 (712)
..+|.+.++. .++.++++..++++.. ....++++.++|+|++.++.... +.-.+|.+..+ .
T Consensus 67 ~~dg~l~va~-~~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g-----~- 139 (295)
T d2ghsa1 67 ISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKG-----K- 139 (295)
T ss_dssp EETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETT-----E-
T ss_pred ecCCCEEEEE-eCccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCC-----c-
Confidence 3455544443 3455667777765431 13457899999999977765432 34455655321 1
Q ss_pred ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC------C--cEEEEeccCCCcEEEEEEecCCCCEEEEE
Q 005147 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR------S--QVLTEMREHERRVWSIDFSSADPTLLASG 679 (712)
Q Consensus 608 ~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~------~--~~~~~~~~H~~~v~sv~fsp~~~~~l~sg 679 (712)
.......-..-+.++|++....++++-+..+.|..+|+.. + .....+.+-......+++.. +|++.++.
T Consensus 140 --~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~-~GnlWva~ 216 (295)
T d2ghsa1 140 --VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNAR 216 (295)
T ss_dssp --EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEE
T ss_pred --EEEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcC-CCCEEeee
Confidence 1111122234578999996444666667788899888742 1 12233444556778899995 89988877
Q ss_pred ECCCcEEEEeCCCCcEEEEE
Q 005147 680 SDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 680 s~D~~v~lWd~~~~~~v~~~ 699 (712)
-..+.|..||- .|+.+..+
T Consensus 217 ~~~g~V~~~dp-~G~~~~~i 235 (295)
T d2ghsa1 217 WGEGAVDRYDT-DGNHIARY 235 (295)
T ss_dssp ETTTEEEEECT-TCCEEEEE
T ss_pred eCCCceEEecC-CCcEeeEe
Confidence 77889999996 57776554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.53 E-value=0.5 Score=44.07 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=60.5
Q ss_pred EEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC-CC-----cEEEEE
Q 005147 575 SFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EG-----VVQVWD 646 (712)
Q Consensus 575 ~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~-Dg-----~V~lwD 646 (712)
..+|| |+.+|-.+ ++.|.+.|+.++ .+.....+...+...+|+| +++.||.... ++ .|.+++
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g--------~~~~Lt~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~i~~~~ 74 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSG--------STRKIVSNLGVINNARFFP-DGRKIAIRVMRGSSLNTADLYFYN 74 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTC--------CEEEEECSSSEEEEEEECT-TSSEEEEEEEESTTCCEEEEEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCC--------CEEEEecCCCcccCEEECC-CCCEEEEEEeeCCCCCceEEEEEE
Confidence 34688 88777654 456777788652 1223344566788999999 5887775532 22 366778
Q ss_pred CCCCcEEEEeccC-------CCcEEEEEEecCCCCEEEEEE
Q 005147 647 VSRSQVLTEMREH-------ERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 647 ~~~~~~~~~~~~H-------~~~v~sv~fsp~~~~~l~sgs 680 (712)
+.+++... +..+ ......+.|+| +++.|+...
T Consensus 75 ~~~g~~~~-lt~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~ 113 (281)
T d1k32a2 75 GENGEIKR-ITYFSGKSTGRRMFTDVAGFDP-DGNLIISTD 113 (281)
T ss_dssp TTTTEEEE-CCCCCEEEETTEECSEEEEECT-TCCEEEEEC
T ss_pred ecCCceEE-eeecCCCccCccccccccccCC-CCCEEEEEE
Confidence 77776543 3222 23457789998 888887653
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.45 E-value=0.18 Score=52.51 Aligned_cols=117 Identities=5% Similarity=0.003 Sum_probs=75.2
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe--cCCCCeEEEEEcCCCCCEEEEE---------eCCCcEE
Q 005147 575 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASS---------NFEGVVQ 643 (712)
Q Consensus 575 ~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~lasg---------s~Dg~V~ 643 (712)
.|.+++.++.. ..++.|.+||+.+... ..+... -....+....|+| ++++++.+ ++.|.+.
T Consensus 23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~------~~l~~~~~~~~~~~~~~~~Sp-D~~~vl~~~~~~~~~r~s~~~~~~ 94 (465)
T d1xfda1 23 KWISDTEFIYR-EQKGTVRLWNVETNTS------TVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYV 94 (465)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCC------EEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEE
T ss_pred EEeCCCcEEEE-eCCCcEEEEECCCCCE------EEEEcCccccccccceeEECC-CCCeEEEEEcccceeEeeccccEE
Confidence 46666665543 4567888898865321 001111 1123566788999 57776665 3467889
Q ss_pred EEECCCCcEEEE--eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 644 VWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 644 lwD~~~~~~~~~--~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
|+|+.++..... .......+....||| ||+.+|-.. ++.|.+.+...+..+...-+
T Consensus 95 i~d~~~~~~~~l~~~~~~~~~l~~~~wSP-DG~~iafv~-~~nl~~~~~~~~~~~~lt~~ 152 (465)
T d1xfda1 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGP-KGQQLIFIF-ENNIYYCAHVGKQAIRVVST 152 (465)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCS-STTCEEEEE-TTEEEEESSSSSCCEEEECC
T ss_pred EEEccCCceeeccCccCCccccceeeecc-CCceEEEEe-cceEEEEecCCCceEEEecc
Confidence 999998864332 233345566789999 999888876 67788888887766654443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.86 E-value=0.081 Score=51.97 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=26.3
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccc
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.||||+|+.++||+++.++..-++||+.+
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cccccCCcchhhhhcccccceeEeccccc
Confidence 68999999999999998776789999987
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=89.57 E-value=1.9 Score=41.64 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=63.3
Q ss_pred cEEEEEcCCcEEE-EEccC-Ccee-----c-----CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccce
Q 005147 544 LCKYLSFSKLRVK-ADLNQ-GDLL-----N-----SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (712)
Q Consensus 544 ~~~~~~~~~~~v~-~dl~~-~~~~-----~-----h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~ 611 (712)
.+.++.....+++ +++.. +.+. . +...-..++++.+|++.++....+.|.+||...+. ...
T Consensus 189 ~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~-------~~~ 261 (314)
T d1pjxa_ 189 QLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ-------PKM 261 (314)
T ss_dssp EEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS-------CSE
T ss_pred EEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCE-------EEE
Confidence 3555555566665 55542 2221 1 12234579999999998888888999999976421 111
Q ss_pred EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 612 ~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.........++++|.|+...+++|.+.+|.|.-.|+..
T Consensus 262 ~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 262 RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 11222457889999984334777888889888888753
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.57 E-value=9.4 Score=35.31 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=86.6
Q ss_pred CccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce---e-cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccc
Q 005147 529 SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL---L-NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~---~-~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~ 602 (712)
..+.++++ . ..++.+-+++....++. .++..+.. . .....+.+++++.-+. +..+-...+.|.+.++...
T Consensus 36 ~~~~~ld~-D-~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~-- 111 (263)
T d1npea_ 36 KVIIGLAF-D-CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT-- 111 (263)
T ss_dssp EEEEEEEE-E-TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--
T ss_pred CcEEEEEE-E-eCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc--
Confidence 33445554 2 24455544455555554 45543321 1 1235678999997555 4456566789999998641
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE--ECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW--DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw--D~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
...+.....-..+..++.+|..+.++.+-...+..+|| ++............-.....+++.+.++.+.++-+
T Consensus 112 -----~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~ 186 (263)
T d1npea_ 112 -----QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (263)
T ss_dssp -----SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred -----eEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeC
Confidence 11122222235678999999755555454333344455 44322222222333356678999874444556556
Q ss_pred CCCcEEEEeCCC
Q 005147 681 DDGSVKLWSINQ 692 (712)
Q Consensus 681 ~D~~v~lWd~~~ 692 (712)
..++|..-|+..
T Consensus 187 ~~~~I~~~~~~g 198 (263)
T d1npea_ 187 GTHRAECLNPAQ 198 (263)
T ss_dssp TTTEEEEEETTE
T ss_pred CCCEEEEEECCC
Confidence 678888888864
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.68 E-value=7.6 Score=35.97 Aligned_cols=114 Identities=9% Similarity=-0.039 Sum_probs=70.9
Q ss_pred CCCeeEEEEcCCCCEEEE-EeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 568 SNLVCSLSFDRDGELFAA-AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat-~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
...+..|+|++..+.+.- -..++.|+..+++... ...........+.++++....+++..+-...+.|.+.+
T Consensus 35 ~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~-------~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~ 107 (263)
T d1npea_ 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-------PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAK 107 (263)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-------CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCC-------cEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEe
Confidence 445678999987665444 4566788888886421 11122222356788888875455555556678999999
Q ss_pred CCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 647 ~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
+....+...+.......+.++++|..+.++.+-...+..+||
T Consensus 108 ~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~ 149 (263)
T d1npea_ 108 MDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (263)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred cCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEE
Confidence 876554333344446789999999666666664433333444
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=86.17 E-value=0.085 Score=49.78 Aligned_cols=28 Identities=7% Similarity=0.063 Sum_probs=24.7
Q ss_pred CceeccCCCCceeecCCCcEEEEecccc
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.++|+|+.|.|||++.++.+-++||+.+
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~ 203 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRL 203 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence 5899999999999987766779999877
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=84.51 E-value=8.5 Score=38.43 Aligned_cols=140 Identities=10% Similarity=0.130 Sum_probs=80.5
Q ss_pred ccCCCCCCcEEEEEcCCcEEEE--EccCCceecCCCCeeEEEEc--CCCCEEEEEeCCC------------------cEE
Q 005147 536 WINPFLEGLCKYLSFSKLRVKA--DLNQGDLLNSSNLVCSLSFD--RDGELFAAAGVNK------------------KIK 593 (712)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~v~~--dl~~~~~~~h~~~V~~i~f~--~~~~~lat~~~d~------------------~I~ 593 (712)
|++...++.+...+.+++++.. .+.+ ...+-.+... |...+++.++.+. .+.
T Consensus 103 FVNDkan~RVAvIdl~~fkt~kIi~iPn------~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t 176 (459)
T d1fwxa2 103 FMNDKANTRVARVRCDVMKCDAILEIPN------AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 176 (459)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSS------CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred EEEcCCCceEEEEECcceeeeEEEecCC------CCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence 4556666777777777776643 3322 3344455554 4556887777632 245
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC---------------------------------
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--------------------------------- 640 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--------------------------------- 640 (712)
++|..+. .+...+.. ...+..+.++| ++.++++.+++.
T Consensus 177 ~ID~~tm-----~V~~QV~V---~g~ld~~~~s~-dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk 247 (459)
T d1fwxa2 177 AVDADKW-----EVAWQVLV---SGNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 247 (459)
T ss_dssp EEETTTT-----EEEEEEEE---SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred EEecCCc-----eEEEEeee---CCChhccccCC-CCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCC
Confidence 6676541 11111111 23456788998 588888877542
Q ss_pred -----cEEEEECCCC---cEEEEeccCCCcEEEEEEecCCCCEEEEEE-CCCcEEEEeCCC
Q 005147 641 -----VVQVWDVSRS---QVLTEMREHERRVWSIDFSSADPTLLASGS-DDGSVKLWSINQ 692 (712)
Q Consensus 641 -----~V~lwD~~~~---~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs-~D~~v~lWd~~~ 692 (712)
-|.+-|.++. ..++.+.. .+....|.++| ||.+++.++ .|.+|.|.|++.
T Consensus 248 ~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSP-DGKyi~VaGKLs~tVSViD~~K 306 (459)
T d1fwxa2 248 YQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTR 306 (459)
T ss_dssp SEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGG
T ss_pred cEEeCCceeecccccCCcceeEEEec-CCCCCceEECC-CCCEEEEeCCcCCcEEEEEehh
Confidence 2344444431 12222222 23456899998 888766665 599999999863
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=84.03 E-value=0.49 Score=46.37 Aligned_cols=27 Identities=4% Similarity=0.033 Sum_probs=22.7
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccc
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.++||+|+.|.|||++. + ..++||+-+
T Consensus 192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~ 218 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRD-G-PMFVDLDDA 218 (325)
T ss_dssp CEECCSSCSGGGEEESS-S-EEECCCTTC
T ss_pred ceeecCCCCcccEEEeC-C-ceEEechhc
Confidence 47999999999999963 4 458999877
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=82.78 E-value=4.9 Score=38.99 Aligned_cols=114 Identities=11% Similarity=0.049 Sum_probs=70.7
Q ss_pred cCCCCEEEEEeCCC-----------cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC-CcEEE
Q 005147 577 DRDGELFAAAGVNK-----------KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE-GVVQV 644 (712)
Q Consensus 577 ~~~~~~lat~~~d~-----------~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D-g~V~l 644 (712)
..+|++++.||.+. .+.+||..+..-. ..+.....+........+.+ ++.+++.|+.+ ..+.+
T Consensus 28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~----~~~~~~~~~~~~~~~~~~~~-~g~i~v~Gg~~~~~~~~ 102 (387)
T d1k3ia3 28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS----DRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTSL 102 (387)
T ss_dssp TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC----CCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEEE
T ss_pred eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEe----ecCCCCCCcccceeEEEEec-CCcEEEeecCCCcceeE
Confidence 44677777777431 3678999763211 11222333444445667777 58888888766 58999
Q ss_pred EECCCCcEEEEeccCC-CcEEEEEEecCCCCEEEEEECC------CcEEEEeCCCCcEE
Q 005147 645 WDVSRSQVLTEMREHE-RRVWSIDFSSADPTLLASGSDD------GSVKLWSINQAILL 696 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~-~~v~sv~fsp~~~~~l~sgs~D------~~v~lWd~~~~~~v 696 (712)
||..+......-.... ..-.+++..+ |+.+++.|+.+ ..+.+||..+....
T Consensus 103 yd~~~~~w~~~~~~~~~r~~~~~~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~ 160 (387)
T d1k3ia3 103 YDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 160 (387)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ecCccCcccccccccccccccceeeec-CCceeeeccccccccccceeeeecCCCCcee
Confidence 9998876543221111 1223456664 89999998753 36899999887653
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=80.36 E-value=2.8 Score=38.41 Aligned_cols=68 Identities=9% Similarity=-0.011 Sum_probs=47.9
Q ss_pred EcCCC--CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC-CC-----cEEEEeCCCCcEE
Q 005147 625 WNSYI--KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD-DG-----SVKLWSINQAILL 696 (712)
Q Consensus 625 ~~p~~--~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~-D~-----~v~lWd~~~~~~v 696 (712)
++| + ++.+|-.+ +|.|.+.|+..++.. .+..+...+....||| ||+.||-.+. ++ .|.+++...++..
T Consensus 6 ~sP-di~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~ 81 (281)
T d1k32a2 6 LNP-DIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFP-DGRKIAIRVMRGSSLNTADLYFYNGENGEIK 81 (281)
T ss_dssp EEE-EEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECT-TSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred cCC-CCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECC-CCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence 356 4 66666554 455777799988754 5677888899999998 9998886543 22 3677777776654
|