Citrus Sinensis ID: 005321
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 702 | 2.2.26 [Sep-21-2011] | |||||||
| P51819 | 703 | Heat shock protein 83 OS= | N/A | no | 0.998 | 0.997 | 0.920 | 0.0 | |
| P27323 | 700 | Heat shock protein 90-1 O | yes | no | 0.992 | 0.995 | 0.885 | 0.0 | |
| Q08277 | 715 | Heat shock protein 82 OS= | N/A | no | 0.998 | 0.980 | 0.867 | 0.0 | |
| Q07078 | 699 | Heat shock protein 81-3 O | yes | no | 0.990 | 0.994 | 0.840 | 0.0 | |
| Q69QQ6 | 699 | Heat shock protein 81-2 O | yes | no | 0.990 | 0.994 | 0.840 | 0.0 | |
| O03986 | 699 | Heat shock protein 90-4 O | no | no | 0.992 | 0.997 | 0.839 | 0.0 | |
| Q0J4P2 | 699 | Heat shock protein 81-1 O | yes | no | 0.988 | 0.992 | 0.845 | 0.0 | |
| A2YWQ1 | 699 | Heat shock protein 81-1 O | N/A | no | 0.988 | 0.992 | 0.845 | 0.0 | |
| P36181 | 699 | Heat shock cognate protei | N/A | no | 0.990 | 0.994 | 0.841 | 0.0 | |
| P55737 | 699 | Heat shock protein 90-2 O | no | no | 0.992 | 0.997 | 0.838 | 0.0 |
| >sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1 | Back alignment and function desciption |
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Score = 1226 bits (3171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/704 (92%), Positives = 680/704 (96%), Gaps = 3/704 (0%)
Query: 1 MADVHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKS 60
MADV M E ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFE LTDKS
Sbjct: 1 MADVQMAEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKS 60
Query: 61 KLDAQPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADV 120
KLDAQPELFIR+VPDK NKTLSIIDSGVGM KADLVNNLGTIARSGTKEFMEALQAGADV
Sbjct: 61 KLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADV 120
Query: 121 SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKIT 180
SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQY+WESQAGGSFTVTRDV GE LGRGTKIT
Sbjct: 121 SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKIT 180
Query: 181 LFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEETKEEEEGDVE 240
LFLKEDQ EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKE+SDDE++E K+EEEGD+E
Sbjct: 181 LFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGDIE 240
Query: 241 DVDEDKEKKGKKKKVKE-VTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHL 299
+VDEDKEK+GKKKK + V+HEWQLINKQKPIWLRKPEE+TKEEYASFYKSLTNDWEDHL
Sbjct: 241 EVDEDKEKEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHL 300
Query: 300 AVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGF 359
AVKHFSVEGQLEFKAILFVP+RAPFDLFDTRKK+NNIKLYVRRVFIMDNCEELIPEYLGF
Sbjct: 301 AVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGF 360
Query: 360 VKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKN 419
VKGVVDSDDLPLNISRE LQQNKILKVIRKNLVKKCIEMFNEIAENK+DY KFY+AFSKN
Sbjct: 361 VKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKDDYNKFYEAFSKN 420
Query: 420 IKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVEN 479
+KLGIHEDSQNRAKLADLLR++STKSGDE+TSLKDYVTRMKEGQKDIYYITGES+KAVEN
Sbjct: 421 LKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVEN 480
Query: 480 SPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL-EEDDEEKKKREE 538
SPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL ++D+EEKKKREE
Sbjct: 481 SPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREE 540
Query: 539 KKKSFENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDSS 598
KKKSFENLCK IK+ILGD VEKVVVSDRIVDSPCCLVTGEYGW+ANMERIMKAQALRDSS
Sbjct: 541 KKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSS 600
Query: 599 MSSYMSSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDLVLLLYETALLTSGFSLDDPNT 658
MSSYMSSKKTMEINPDNGIMEELRKRAE DKNDKSVKDLVLLL+ETALLTSGFSLDDPNT
Sbjct: 601 MSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNT 660
Query: 659 FAARIHRMLKLGLSIEEDETAGDDAEMPPLEDEGNEESKMEEVD 702
F ARIHRMLKLGLSI+E+E AGDDA+MP LE+E EESKMEEVD
Sbjct: 661 FGARIHRMLKLGLSIDEEE-AGDDADMPALEEEAGEESKMEEVD 703
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Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. Ipomoea nil (taxid: 35883) |
| >sp|P27323|HS901_ARATH Heat shock protein 90-1 OS=Arabidopsis thaliana GN=HSP90-1 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q08277|HSP82_MAIZE Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q07078|HSP83_ORYSJ Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q69QQ6|HSP82_ORYSJ Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1 | Back alignment and function description |
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| >sp|O03986|HS904_ARATH Heat shock protein 90-4 OS=Arabidopsis thaliana GN=HSP90-4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1 | Back alignment and function description |
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| >sp|P55737|HS902_ARATH Heat shock protein 90-2 OS=Arabidopsis thaliana GN=HSP90-2 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 702 | ||||||
| 449445987 | 703 | PREDICTED: heat shock protein 83-like [C | 1.0 | 0.998 | 0.913 | 0.0 | |
| 224134805 | 703 | predicted protein [Populus trichocarpa] | 1.0 | 0.998 | 0.921 | 0.0 | |
| 225464589 | 704 | PREDICTED: heat shock protein 83-like [V | 1.0 | 0.997 | 0.921 | 0.0 | |
| 356530818 | 699 | PREDICTED: heat shock protein 83-like [G | 0.992 | 0.997 | 0.912 | 0.0 | |
| 147789390 | 704 | hypothetical protein VITISV_007727 [Viti | 1.0 | 0.997 | 0.921 | 0.0 | |
| 224077478 | 703 | predicted protein [Populus trichocarpa] | 1.0 | 0.998 | 0.918 | 0.0 | |
| 356559744 | 699 | PREDICTED: heat shock protein 83-like [G | 0.992 | 0.997 | 0.912 | 0.0 | |
| 33326375 | 698 | heat shock protein [Hevea brasiliensis] | 0.992 | 0.998 | 0.924 | 0.0 | |
| 225426164 | 703 | PREDICTED: heat shock protein 83-like is | 1.0 | 0.998 | 0.923 | 0.0 | |
| 312283005 | 705 | unnamed protein product [Thellungiella h | 1.0 | 0.995 | 0.897 | 0.0 |
| >gi|449445987|ref|XP_004140753.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] gi|449485495|ref|XP_004157188.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 1256 bits (3251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/703 (91%), Positives = 677/703 (96%), Gaps = 1/703 (0%)
Query: 1 MADVHMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKS 60
MADV M + ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIR+E LTDKS
Sbjct: 1 MADVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDKS 60
Query: 61 KLDAQPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADV 120
KLD QPELFIRIVPDK NKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADV
Sbjct: 61 KLDGQPELFIRIVPDKVNKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADV 120
Query: 121 SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKIT 180
SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQY+WESQAGGSFTVTRDV+GE LGRGTKIT
Sbjct: 121 SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVNGEQLGRGTKIT 180
Query: 181 LFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEETKEEEEGDVE 240
LFLKEDQ EYLEERRIKDLVKKHSEFISYPIYLW EKT EKE+SDDE++E K+EEEG+VE
Sbjct: 181 LFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWVEKTIEKEISDDEDDEPKKEEEGNVE 240
Query: 241 DVDEDKEKKGKKKKVKEVTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLA 300
DVDE+KE K KKKK+KEV+HEW+LINKQKPIWLRKPEE+TKEEYASFYKSLTNDWE+HLA
Sbjct: 241 DVDEEKETKSKKKKIKEVSHEWELINKQKPIWLRKPEEITKEEYASFYKSLTNDWEEHLA 300
Query: 301 VKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFV 360
VKHFSVEGQLEFKAILFVP+RAPFDLFD RKK+NNIKLYVRRVFIMDNCEELIPEYLGFV
Sbjct: 301 VKHFSVEGQLEFKAILFVPKRAPFDLFDNRKKMNNIKLYVRRVFIMDNCEELIPEYLGFV 360
Query: 361 KGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNI 420
KGVVDSDDLPLNISRE LQQNKILKVIRKNLVKKCIEMFNEIAENKEDY KFY+AFSKN+
Sbjct: 361 KGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYEAFSKNL 420
Query: 421 KLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENS 480
KLGIHEDSQNRAKLADLLRF+STKSGDEMTSLKDYVTRMKEGQKDIYYITGES+KAVENS
Sbjct: 421 KLGIHEDSQNRAKLADLLRFYSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENS 480
Query: 481 PFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL-EEDDEEKKKREEK 539
PFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL +E +EEKKK+EEK
Sbjct: 481 PFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEK 540
Query: 540 KKSFENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDSSM 599
KKSFENLCKTIK+ILGD VEKVVVSDRIVDSPCCLVTGEYGW+ANMERIMKAQALRD+SM
Sbjct: 541 KKSFENLCKTIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDNSM 600
Query: 600 SSYMSSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDLVLLLYETALLTSGFSLDDPNTF 659
+YMSSKKTMEINPDNGIMEELRKRAE DKNDKSVKDLV+LL+ETALLTSGFSLDDPNTF
Sbjct: 601 GAYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLFETALLTSGFSLDDPNTF 660
Query: 660 AARIHRMLKLGLSIEEDETAGDDAEMPPLEDEGNEESKMEEVD 702
AARIHRMLKLGLSI+E+E GDDA+MP LE++ EESKMEEVD
Sbjct: 661 AARIHRMLKLGLSIDEEENEGDDADMPALEEDATEESKMEEVD 703
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134805|ref|XP_002327494.1| predicted protein [Populus trichocarpa] gi|222836048|gb|EEE74469.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225464589|ref|XP_002274022.1| PREDICTED: heat shock protein 83-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356530818|ref|XP_003533977.1| PREDICTED: heat shock protein 83-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|147789390|emb|CAN73318.1| hypothetical protein VITISV_007727 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224077478|ref|XP_002305263.1| predicted protein [Populus trichocarpa] gi|222848227|gb|EEE85774.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356559744|ref|XP_003548157.1| PREDICTED: heat shock protein 83-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|33326375|gb|AAQ08597.1| heat shock protein [Hevea brasiliensis] | Back alignment and taxonomy information |
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| >gi|225426164|ref|XP_002278894.1| PREDICTED: heat shock protein 83-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|312283005|dbj|BAJ34368.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P24724 | HSP90_THEPA | No assigned EC number | 0.6867 | 0.9857 | 0.9597 | yes | no |
| Q4R4T5 | HS90B_MACFA | No assigned EC number | 0.6848 | 0.9814 | 0.9516 | N/A | no |
| P46598 | HSP90_CANAL | No assigned EC number | 0.6596 | 0.9943 | 0.9872 | N/A | no |
| Q5R710 | HS90B_PONAB | No assigned EC number | 0.6834 | 0.9814 | 0.9516 | yes | no |
| Q08277 | HSP82_MAIZE | No assigned EC number | 0.8679 | 0.9985 | 0.9804 | N/A | no |
| P41887 | HSP90_SCHPO | No assigned EC number | 0.6818 | 0.9928 | 0.9900 | yes | no |
| P55737 | HS902_ARATH | No assigned EC number | 0.8383 | 0.9928 | 0.9971 | no | no |
| P07900 | HS90A_HUMAN | No assigned EC number | 0.6981 | 0.9871 | 0.9467 | yes | no |
| P07901 | HS90A_MOUSE | No assigned EC number | 0.6930 | 0.9871 | 0.9454 | yes | no |
| P36181 | HSP80_SOLLC | No assigned EC number | 0.8416 | 0.9900 | 0.9942 | N/A | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.7109 | 0.9529 | 0.9291 | yes | no |
| Q69QQ6 | HSP82_ORYSJ | No assigned EC number | 0.8409 | 0.9900 | 0.9942 | yes | no |
| O02705 | HS90A_PIG | No assigned EC number | 0.6986 | 0.9871 | 0.9454 | yes | no |
| Q25293 | HSP83_LEIIN | No assigned EC number | 0.6805 | 0.9472 | 0.9486 | yes | no |
| O44001 | HSP90_EIMTE | No assigned EC number | 0.7226 | 0.9914 | 0.9761 | N/A | no |
| Q61W58 | HSP90_CAEBR | No assigned EC number | 0.6718 | 0.9857 | 0.9801 | N/A | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.6844 | 0.9857 | 0.9584 | yes | no |
| Q9GKX7 | HS90A_HORSE | No assigned EC number | 0.6986 | 0.9871 | 0.9454 | yes | no |
| P11501 | HS90A_CHICK | No assigned EC number | 0.7025 | 0.9871 | 0.9519 | no | no |
| P27741 | HSP83_LEIAM | No assigned EC number | 0.6691 | 0.9458 | 0.9472 | N/A | no |
| Q0J4P2 | HSP81_ORYSJ | No assigned EC number | 0.8450 | 0.9886 | 0.9928 | yes | no |
| P27323 | HS901_ARATH | No assigned EC number | 0.8857 | 0.9928 | 0.9957 | yes | no |
| P46633 | HS90A_CRIGR | No assigned EC number | 0.6875 | 0.9871 | 0.9454 | yes | no |
| Q07078 | HSP83_ORYSJ | No assigned EC number | 0.8409 | 0.9900 | 0.9942 | yes | no |
| P82995 | HS90A_RAT | No assigned EC number | 0.6930 | 0.9871 | 0.9454 | yes | no |
| O43109 | HSP90_PODAS | No assigned EC number | 0.675 | 0.9316 | 0.9329 | yes | no |
| P12861 | HSP83_TRYBB | No assigned EC number | 0.6715 | 0.9501 | 0.9487 | N/A | no |
| Q90474 | H90A1_DANRE | No assigned EC number | 0.6764 | 0.9886 | 0.9572 | yes | no |
| P02828 | HSP83_DROME | No assigned EC number | 0.6699 | 0.9886 | 0.9679 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.6950 | 0.9800 | 0.9828 | yes | no |
| P51819 | HSP83_IPONI | No assigned EC number | 0.9204 | 0.9985 | 0.9971 | N/A | no |
| P51818 | HS903_ARATH | No assigned EC number | 0.8354 | 0.9928 | 0.9971 | no | no |
| O02192 | HSP83_DROAV | No assigned EC number | 0.6694 | 0.9843 | 0.9650 | N/A | no |
| Q76LV2 | HS90A_BOVIN | No assigned EC number | 0.6986 | 0.9871 | 0.9454 | yes | no |
| O03986 | HS904_ARATH | No assigned EC number | 0.8397 | 0.9928 | 0.9971 | no | no |
| O61998 | HSP90_BRUPA | No assigned EC number | 0.6652 | 0.9857 | 0.9651 | N/A | no |
| A2YWQ1 | HSP81_ORYSI | No assigned EC number | 0.8450 | 0.9886 | 0.9928 | N/A | no |
| Q18688 | HSP90_CAEEL | No assigned EC number | 0.6756 | 0.9814 | 0.9814 | yes | no |
| P04809 | HSP83_DROPS | No assigned EC number | 0.6638 | 0.9857 | 0.9651 | yes | no |
| Q4R4P1 | HS90A_MACFA | No assigned EC number | 0.6986 | 0.9871 | 0.9454 | N/A | no |
| P06660 | HSP85_TRYCR | No assigned EC number | 0.6759 | 0.9544 | 0.9517 | N/A | no |
| P30946 | HS90A_RABIT | No assigned EC number | 0.6932 | 0.9586 | 0.9697 | yes | no |
| Q04619 | HS90B_CHICK | No assigned EC number | 0.6796 | 0.9857 | 0.9544 | yes | no |
| A5A6K9 | HS90A_PANTR | No assigned EC number | 0.6972 | 0.9871 | 0.9454 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 702 | |||
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-170 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 2e-25 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 4e-12 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 8e-10 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 7e-08 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 4e-06 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 2e-04 |
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
Score = 932 bits (2409), Expect = 0.0
Identities = 472/703 (67%), Positives = 583/703 (82%), Gaps = 12/703 (1%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++ LTD S L P L
Sbjct: 2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRL 61
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
IR+VPDK NKTL++ D+G+GMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQFGV
Sbjct: 62 CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGV 121
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYSAYLVA++V VT+K+N DE YVWES AGG+FT+T + RGT+ITL LKEDQ
Sbjct: 122 GFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTIT-STPESDMKRGTRITLHLKEDQM 180
Query: 189 EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSD-DEEEETKEEEEGD---VEDV-D 243
EYLE RR+K+L+KKHSEFI Y I L EKTTEKEV+D DEE+ K +E+G+ VE+V +
Sbjct: 181 EYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEEPKVEEVKE 240
Query: 244 EDKEKKGKKKKVKEVTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKH 303
D+ KK K KKVKEVT E+++ NK KP+W R P++VTKEEYA+FYK+++NDWED A KH
Sbjct: 241 GDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKH 300
Query: 304 FSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGV 363
FSVEGQLEF++I+FVP+RAPFD+F+ KK NNIKLYVRRVFIMDNCE+L P++LGFVKGV
Sbjct: 301 FSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGV 360
Query: 364 VDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLG 423
VDS+DLPLNISRE LQQNKILKVIRKN+VKKC+EMF+E+AENKEDY +FY+ F KNIKLG
Sbjct: 361 VDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLG 420
Query: 424 IHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFL 483
IHED+ NR KL +LLRF+ST+SG+EMT+LKDYVTRMK GQK IYYITG+S+K +E SPF+
Sbjct: 421 IHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFI 480
Query: 484 ERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEEDDEEKKKREEKKKSF 543
E+ +++G EVLFM + IDEY + Q+K+++ KK TKEG+ EE +EEK++REE+K +
Sbjct: 481 EQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAAC 540
Query: 544 ENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDSSMSSYM 603
E LCKT+KE+LGD VEKV+VS+R+ SPC LVT E+GWSA+ME+IM+ QALRDSSM+ YM
Sbjct: 541 EKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYM 600
Query: 604 SSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDLVLLLYETALLTSGFSLDDPNTFAARI 663
SKKTME+NP + I++ELR+R D+NDK+VKDLV LL++T+LLTSGF L+DP +A RI
Sbjct: 601 MSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERI 660
Query: 664 HRMLKLGLSIEEDETAGDDAEMPPLEDEGNE----ESKMEEVD 702
+RM+KLGLS++E+E + AE P E E S ME+VD
Sbjct: 661 NRMIKLGLSLDEEEE--EAAEAPVAETAPAEVTAGTSSMEQVD 701
|
Length = 701 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 702 | |||
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 99.83 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.71 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.69 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.66 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.39 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 99.26 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.19 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 99.08 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 99.06 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 98.96 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 98.87 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.75 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 98.7 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.67 | |
| KOG1978 | 672 | consensus DNA mismatch repair protein - MLH2/PMS1/ | 98.62 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 98.48 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.42 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 98.38 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 97.71 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 97.4 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.36 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 97.23 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 97.08 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 97.05 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 96.87 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 96.86 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.83 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.8 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.78 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.76 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.7 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.68 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.66 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 96.64 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 96.64 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 96.55 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 96.53 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.51 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.48 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.47 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 96.47 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.43 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 96.39 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 96.37 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.3 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 96.25 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 96.11 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 96.08 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 95.94 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 95.89 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 95.89 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 95.65 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 95.64 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 95.62 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 95.57 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 95.52 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 95.52 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 95.51 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 95.26 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 95.06 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 94.8 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 94.75 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 94.71 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 94.55 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 94.5 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 94.28 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 94.26 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 93.76 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 93.43 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 93.29 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 92.66 | |
| PRK13557 | 540 | histidine kinase; Provisional | 92.4 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 91.54 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 91.47 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 89.62 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 89.62 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 89.23 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 89.17 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 88.78 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 87.26 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 86.15 | |
| COG4192 | 673 | Signal transduction histidine kinase regulating ph | 86.05 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 85.13 |
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-175 Score=1373.49 Aligned_cols=673 Identities=55% Similarity=0.924 Sum_probs=627.7
Q ss_pred cccccchhhcHHHHHHHHHHhcCCCchhHHHHHHHcHHhHhhhhHhhccCCCCccCCCCCceEEEEEcCCCCEEEEEeCC
Q 005321 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELFIRIVPDKANKTLSIIDSG 87 (702)
Q Consensus 8 ~~e~~~Fq~e~~~ll~ll~~~LYs~~~v~lRELIqNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnG 87 (702)
+.++|.||+++.|||.+|+|+||+|+++||||||+||+||++|+|+++|+|+..++...++.|.|..|+.++.|.|.|.|
T Consensus 71 kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L~~~~el~ikIK~Dke~klLhi~DtG 150 (785)
T KOG0020|consen 71 KAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVLGETEELEIKIKADKEKKLLHITDTG 150 (785)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHhCcCcceEEEEeechhhCeeeEeccc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhhhccCchhHHHHHhcCCCC-----cccccccccceeeeeecceEEEEeecCCCceEEEEEccCceE
Q 005321 88 VGMTKADLVNNLGTIARSGTKEFMEALQAGADV-----SMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSF 162 (702)
Q Consensus 88 iGMt~~dl~~~l~~Ia~S~~~~f~~~~~~~~~~-----~~iG~fGIGf~S~F~vad~v~V~Sr~~~~~~~~w~~~~~~~~ 162 (702)
+|||++||++||||||+||+++|++++++.++. .+||||||||||+|+|||+|.|+|+++++.+|.|+|++. .|
T Consensus 151 iGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESdan-~F 229 (785)
T KOG0020|consen 151 IGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESDAN-SF 229 (785)
T ss_pred CCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeeccCc-ce
Confidence 999999999999999999999999999864433 689999999999999999999999999999999999875 99
Q ss_pred EEEeCCCCCCCCCceEEEEEeccchhhhhcHHHHHHHHHHhcccCccceEEecccccccccCchhhhhhh-hcccCCccc
Q 005321 163 TVTRDVSGEPLGRGTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEETK-EEEEGDVED 241 (702)
Q Consensus 163 ~i~~~~~~~~~~~GT~I~L~lk~~~~e~~~~~~i~~ii~~ys~fl~~PI~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 241 (702)
+|..+|++++.+|||+|+|+|++++.+|+++++|+++|++||+||.|||++|..++++.+++-+++++.+ +..+.+...
T Consensus 230 svseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~~~ed~ea~ 309 (785)
T KOG0020|consen 230 SVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEEDSTEDKEAA 309 (785)
T ss_pred eeecCCCCCcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccccccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999887777766554432 211222223
Q ss_pred cchhhhhhccccceeeeeeeeEEeecCCCccccCCCCCCHHHHHHHHHHhhcCcccccceeeeeccceeEEEEEEEeeCC
Q 005321 242 VDEDKEKKGKKKKVKEVTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRR 321 (702)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~W~~~~~~~~~~ey~~fy~~~~~~~~~pl~~~h~~~eg~~~~~~ll~iP~~ 321 (702)
+++++++++|+|++.+++|+|+++|+.+|||+|+|++|++++|..||+++++++.+|++|+||.+||.++|+++||+|+.
T Consensus 310 vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds~dPma~~HF~aEGeVtFksiLyVP~~ 389 (785)
T KOG0020|consen 310 VEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDSTDPMAYIHFTAEGEVTFKSILYVPKK 389 (785)
T ss_pred hhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccccCccceeeeeccccEEEEEEEEeCCC
Confidence 44444456899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhh--hhcccceEEEeccccccccccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHH
Q 005321 322 APFDLFDT--RKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMF 399 (702)
Q Consensus 322 ~p~~~~~~--~~~~~~i~lYv~~v~I~d~~~~llP~~l~Fv~gvVDs~dLplnvSRE~lq~~~~l~~i~~~l~~k~l~~l 399 (702)
+|.++|+. .+.+.+|+||||||||+|++.+++|.||+||||||||+|||||||||+||++++|+.|+++|++|+|+||
T Consensus 390 ~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHkllKvIkKKLvrK~LDmi 469 (785)
T KOG0020|consen 390 APRDLFDEYGSKKSDNIKLYVRRVFITDEFHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHKLLKVIKKKLVRKVLDMI 469 (785)
T ss_pred CchHHHHHhccccccceeEEEEEEEecchHHHHhHHHHHHHhhccCcCcCcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999984 3456999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCHHHHHH-HHHHHhHHhhccccCChhhHHHHhchhcceecCCCCcccCHHHHHHhhccCCceEEEEeCCCHHHHh
Q 005321 400 NEIAENKEDYAK-FYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVE 478 (702)
Q Consensus 400 ~~la~d~~~y~~-f~~~~~~~lK~g~~eD~~~~~~l~~lLrf~ts~~~~~~~SL~eYv~rm~~~Q~~IyY~~~~~~~~~~ 478 (702)
++++. ++|.. ||++||.+||+|+++|+.||..||+||||+||.++++.+||++|++|||+.|+.|||++|.|++++.
T Consensus 470 kKia~--e~~~d~FW~EFgtniKLGviED~sNr~rLAKLLrFqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr~e~E 547 (785)
T KOG0020|consen 470 KKIAG--EKYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLRFQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSRKEVE 547 (785)
T ss_pred HHhhc--cccchHHHHHhccceeeeeeeCcccHHHHHHHHhhhccCCCCCcccHHHHHHHHhhccccEEEecCCcHhhhc
Confidence 99975 56765 9999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cChhHHHHHHcCCEEEEeCCCchHHHHHHhhhccCcceEeecccCCCCCcchHHHHhHHHHHHhHHHHHHHHHH-HhCCc
Q 005321 479 NSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEEDDEEKKKREEKKKSFENLCKTIKE-ILGDN 557 (702)
Q Consensus 479 ~sp~~e~~~~~g~eVL~l~d~iDE~~l~~l~~~~g~~~~~v~~~~l~l~~~~e~~~~~e~~~~~~~~L~~~~k~-~L~~~ 557 (702)
.|||+|.+.++||||||||+|+||+|||.|.+|+|++|++|+++|+++++.+..++..+..+++|+||+.|+|. +|.++
T Consensus 548 ~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNVaKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~~alkd~ 627 (785)
T KOG0020|consen 548 KSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNVAKEGVKFDKSEKTKESHEALEEEFEPLTKWLKDKALKDK 627 (785)
T ss_pred cCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHHHhhhcccCcccchhHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999988777777778888999999999998 57899
Q ss_pred eeEEEEeecCCCCCeEEEeCCCCccHHHHHHHHHHhcc---CCcccccCCCCceEEECCCChHHHHHHhhhhcCCCchhH
Q 005321 558 VEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALR---DSSMSSYMSSKKTMEINPDNGIMEELRKRAEVDKNDKSV 634 (702)
Q Consensus 558 V~~V~vS~rL~dsPa~lv~~e~g~s~~meR~mkaq~~~---~~~~~~~~~~k~~LEINp~HPLIk~L~~~~~~d~~~~~~ 634 (702)
|.+++||+||++|||++|++.+|||+||+|+|++|+.+ |+....|+.+|++|||||+||||+.|+.+...|+.++.+
T Consensus 628 ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~adeeD~t~ 707 (785)
T KOG0020|consen 628 IEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKSKDPSKNYYASQKKTFEINPRHPLIRELLRRIAADEEDETV 707 (785)
T ss_pred HHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhccCCchhhHHhccCceeeeCCCChHHHHHHHHhhcCcccchH
Confidence 99999999999999999999999999999999999876 444444778999999999999999999999999888999
Q ss_pred HHHHHHHHHhHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCcccccCCCC
Q 005321 635 KDLVLLLYETALLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA 683 (702)
Q Consensus 635 ~~~~~lLyd~All~~G~~i~d~~~f~~ri~~ll~~~l~~~~~~~~~~~~ 683 (702)
++.|.+||++|+|.+||.+.|+..|+.||+++|+++|+|+.++.+++++
T Consensus 708 ~d~A~lmf~TAtlrSGf~L~d~~~fadrIe~~lr~sL~is~Da~ve~e~ 756 (785)
T KOG0020|consen 708 KDTAVLMFETATLRSGFILQDTKDFADRIENMLRQSLNISPDAQVEEEI 756 (785)
T ss_pred HHHHHHHHHHHHhhcCccccchHHHHHHHHHHHHhhcCCCccccccccc
Confidence 9999999999999999999999999999999999999999887776654
|
|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 702 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-171 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 1e-168 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-152 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-147 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-146 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-142 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 1e-119 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 1e-116 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 1e-111 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 1e-110 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 1e-109 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 1e-109 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-108 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-108 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 1e-104 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 1e-94 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 2e-94 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 2e-94 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 2e-94 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 2e-94 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 2e-94 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 2e-94 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 2e-94 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 2e-94 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 2e-94 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 2e-94 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 2e-94 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 2e-94 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 3e-94 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 3e-94 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 3e-94 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 3e-94 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 3e-94 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 3e-94 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 3e-94 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 3e-94 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 3e-94 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 3e-94 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 4e-94 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 4e-94 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 4e-94 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 4e-94 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 4e-94 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 5e-94 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 5e-94 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 6e-94 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 1e-93 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 2e-93 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 2e-93 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 2e-93 | ||
| 3k60_A | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 1e-92 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 3e-91 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 7e-91 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 1e-85 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 5e-85 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 5e-85 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 9e-84 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 9e-84 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 9e-84 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 2e-83 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 2e-83 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 2e-83 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 2e-83 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 2e-83 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 2e-83 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 2e-83 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 4e-83 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 5e-83 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 6e-83 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 2e-82 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 5e-82 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 7e-73 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 2e-65 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 3e-65 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 4e-65 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 4e-65 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 2e-64 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 1e-60 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 4e-56 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 8e-50 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 5e-45 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
Score = 1042 bits (2695), Expect = 0.0
Identities = 454/676 (67%), Positives = 551/676 (81%), Gaps = 13/676 (1%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEETKEEEE-----------G 237
EYLEE+RIK+++K+HSEF++YPI L K EKEV EEE+ EE++
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKP 242
Query: 238 DVEDVDEDKEKKGKKKKVKEVTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWED 297
+E+VDE++EKK K KKVKE E + +NK KP+W R P ++T+EEY +FYKS++NDWED
Sbjct: 243 KLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWED 302
Query: 298 HLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYL 357
L VKHFSVEGQLEF+AILF+P+RAPFDLF+++KK NNIKLYVRRVFI D E+LIPE+L
Sbjct: 303 PLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWL 362
Query: 358 GFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFS 417
FVKGVVDS+DLPLN+SRE LQQNKI+KVIRKN+VKK IE FNEIAE+ E + KFY AFS
Sbjct: 363 SFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFS 422
Query: 418 KNIKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477
KNIKLG+HED+QNRA LA LLR++STKS DE+TSL DYVTRM E QK+IYYITGES KAV
Sbjct: 423 KNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAV 482
Query: 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEEDDEEKKKRE 537
E SPFL+ LK K +EVLF+ D IDEYA QLKE++GK LV TK+ +LEE DEEK +RE
Sbjct: 483 EKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAERE 541
Query: 538 EKKKSFENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDS 597
++ K +E L K +KEILGD VEKVVVS +++D+P + TG++GWSANMERIMKAQALRDS
Sbjct: 542 KEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDS 601
Query: 598 SMSSYMSSKKTMEINPDNGIMEELRKRA-EVDKNDKSVKDLVLLLYETALLTSGFSLDDP 656
SMSSYMSSKKT EI+P + I++EL+KR E DK+VKDL LLYETALLTSGFSLD+P
Sbjct: 602 SMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEP 661
Query: 657 NTFAARIHRMLKLGLS 672
+FA+RI+R++ LGL+
Sbjct: 662 TSFASRINRLISLGLN 677
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 702 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 99.97 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.86 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.8 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.79 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.78 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 99.26 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 99.26 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 99.18 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 99.18 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 99.14 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 99.01 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.95 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.72 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.68 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.68 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.62 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.36 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 98.24 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 98.03 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.48 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.45 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.44 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.39 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.34 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.31 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.27 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.23 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 97.19 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 97.18 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 97.18 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 97.18 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 97.17 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 97.15 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.08 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 97.07 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 96.98 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 96.81 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.78 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.51 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 96.3 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.17 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 95.51 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 95.5 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 95.17 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 85.47 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-168 Score=1435.41 Aligned_cols=663 Identities=68% Similarity=1.056 Sum_probs=572.4
Q ss_pred ccccchhhcHHHHHHHHHHhcCCCchhHHHHHHHcHHhHhhhhHhhccCCCCccCCCCCceEEEEEcCCCCEEEEEeCCC
Q 005321 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELFIRIVPDKANKTLSIIDSGV 88 (702)
Q Consensus 9 ~e~~~Fq~e~~~ll~ll~~~LYs~~~v~lRELIqNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 88 (702)
.|+|.||+|+++||++|+++||||+++|||||||||+||++++|++++++++.......+.|+|.+++++++|+|+|||+
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence 37999999999999999999999999999999999999999999999999988777788999999998889999999999
Q ss_pred CCCHHHHHHHHhhhhccCchhHHHHHhcCCCCcccccccccceeeeeecceEEEEeecCCCceEEEEEccCceEEEEeCC
Q 005321 89 GMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDV 168 (702)
Q Consensus 89 GMt~~dl~~~l~~Ia~S~~~~f~~~~~~~~~~~~iG~fGIGf~S~F~vad~v~V~Sr~~~~~~~~w~~~~~~~~~i~~~~ 168 (702)
|||++||.++|++||+||++.|+++++.+.+...||||||||||+||+|++|+|+||+.++.++.|++.|++.|+|.+++
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~~~ 162 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDE 162 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEECC
T ss_pred CCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEeecC
Confidence 99999999999999999999999888765677899999999999999999999999998777999999999999999853
Q ss_pred CCCCCCCceEEEEEeccchhhhhcHHHHHHHHHHhcccCccceEEecccccccccCchhhhh-----------hhhcccC
Q 005321 169 SGEPLGRGTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEEEE-----------TKEEEEG 237 (702)
Q Consensus 169 ~~~~~~~GT~I~L~lk~~~~e~~~~~~i~~ii~~ys~fl~~PI~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 237 (702)
.+...++||+|+|+|+++..+|++.++|+++|++||.|++|||+++.+++.+.+++++++++ +++++++
T Consensus 163 ~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~~~ 242 (677)
T 2cg9_A 163 VNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKP 242 (677)
T ss_dssp SSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC--------------------------
T ss_pred CCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhcccccccccccccccccc
Confidence 23456899999999999999999999999999999999999999986554434433322110 0011112
Q ss_pred CccccchhhhhhccccceeeeeeeeEEeecCCCccccCCCCCCHHHHHHHHHHhhcCcccccceeeeeccceeEEEEEEE
Q 005321 238 DVEDVDEDKEKKGKKKKVKEVTHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILF 317 (702)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~W~~~~~~~~~~ey~~fy~~~~~~~~~pl~~~h~~~eg~~~~~~ll~ 317 (702)
+.+++++++++++++|++++++++|+.+|+.+|||+|+|++||+++|.+||++++++|++||+|+||++||+++|+||||
T Consensus 243 ~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~~~lLy 322 (677)
T 2cg9_A 243 KLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILF 322 (677)
T ss_dssp -------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCEEEEEE
T ss_pred ccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceEEEEEE
Confidence 22222221112344566666678999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCchhhhhcccceEEEeccccccccccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHH
Q 005321 318 VPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIE 397 (702)
Q Consensus 318 iP~~~p~~~~~~~~~~~~i~lYv~~v~I~d~~~~llP~~l~Fv~gvVDs~dLplnvSRE~lq~~~~l~~i~~~l~~k~l~ 397 (702)
||+++||++|.++..+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++|+++
T Consensus 323 iP~~ap~d~~~~~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~kkvl~ 402 (677)
T 2cg9_A 323 IPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIE 402 (677)
T ss_dssp ECSSCCC---------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHHHHHHHH
T ss_pred EcCCCchhhhhhhhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999998656679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHhHHhhccccCChhhHHHHhchhcceecCCCCcccCHHHHHHhhccCCceEEEEeCCCHHHH
Q 005321 398 MFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477 (702)
Q Consensus 398 ~l~~la~d~~~y~~f~~~~~~~lK~g~~eD~~~~~~l~~lLrf~ts~~~~~~~SL~eYv~rm~~~Q~~IyY~~~~~~~~~ 477 (702)
+|.+||+|+++|++||++||.+||+|+++|..||++|++||||+||+++++++||+||++||+++|+.|||++|++++++
T Consensus 403 ~l~~la~~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~~ 482 (677)
T 2cg9_A 403 AFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAV 482 (677)
T ss_dssp HHHHHHSCSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEEEECSCSTTT
T ss_pred HHHHHHhCHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEEEeCCCHHHH
Confidence 99999999999999999999999999999999999999999999999766899999999999999999999999999999
Q ss_pred hcChhHHHHHHcCCEEEEeCCCchHHHHHHhhhccCcceEeecccCCCCCcchHHHHhHHHHHHhHHHHHHHHHHHhCCc
Q 005321 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEEDDEEKKKREEKKKSFENLCKTIKEILGDN 557 (702)
Q Consensus 478 ~~sp~~e~~~~~g~eVL~l~d~iDE~~l~~l~~~~g~~~~~v~~~~l~l~~~~e~~~~~e~~~~~~~~L~~~~k~~L~~~ 557 (702)
++|||+|.|+++|||||||++||||+||++|.+|+|++|++|+++ +++++.+++++..++.+++|++||+|||++|+++
T Consensus 483 ~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L~~~~k~~L~~~ 561 (677)
T 2cg9_A 483 EKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTKALKEILGDQ 561 (677)
T ss_dssp TTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHHHHHHHHTTCSS
T ss_pred HhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhhhhhhhhHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999 9887654444445566779999999999999999
Q ss_pred eeEEEEeecCCCCCeEEEeCCCCccHHHHHHHHHHhccCCcccccCCCCceEEECCCChHHHHHHhhhhcC-CCchhHHH
Q 005321 558 VEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEVD-KNDKSVKD 636 (702)
Q Consensus 558 V~~V~vS~rL~dsPa~lv~~e~g~s~~meR~mkaq~~~~~~~~~~~~~k~~LEINp~HPLIk~L~~~~~~d-~~~~~~~~ 636 (702)
|.+|++|+||++||||||++++|||++|+|||++|+++++.+.+++..+++|||||+||||++|..+...| .+++.+++
T Consensus 562 v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~d~~~~~~~~~ 641 (677)
T 2cg9_A 562 VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKD 641 (677)
T ss_dssp CSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHTCCSSCSSSST
T ss_pred ceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhccccCHHHHHH
Confidence 99999999999999999999999999999999998776665556778899999999999999998876544 34567999
Q ss_pred HHHHHHHhHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Q 005321 637 LVLLLYETALLTSGFSLDDPNTFAARIHRMLKLGLS 672 (702)
Q Consensus 637 ~~~lLyd~All~~G~~i~d~~~f~~ri~~ll~~~l~ 672 (702)
+|++|||+|+|++|++++||+.|++|+|+||.++||
T Consensus 642 ~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 642 LTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp THHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999987765
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 702 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 1e-108 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 1e-72 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 2e-71 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 2e-70 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 8e-33 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 326 bits (837), Expect = e-108
Identities = 184/254 (72%), Positives = 218/254 (85%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P+RAPFDLF+
Sbjct: 3 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 62
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQQNKI+KVIR
Sbjct: 63 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 122
Query: 389 KNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDE 448
KN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR++STKS DE
Sbjct: 123 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 182
Query: 449 MTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQL 508
+TSL DYVTRM E QK+IYYITGES K+VE SPFL+ LK K +EVLF+ D IDEYA QL
Sbjct: 183 LTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 242
Query: 509 KEYDGKKLVSATKE 522
KE++GK LV TK+
Sbjct: 243 KEFEGKTLVDITKD 256
|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
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| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
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| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
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| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
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Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 702 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.97 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.59 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.58 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.38 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 98.17 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 98.07 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.85 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.6 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 97.46 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.43 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.42 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 97.38 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.35 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 97.24 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.23 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 96.61 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 95.83 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 94.26 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-82 Score=649.79 Aligned_cols=255 Identities=72% Similarity=1.149 Sum_probs=240.1
Q ss_pred CCCccccCCCCCCHHHHHHHHHHhhcCcccccceeeeeccceeEEEEEEEeeCCCCCCchhhhhcccceEEEeccccccc
Q 005321 268 QKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMD 347 (702)
Q Consensus 268 ~~~~W~~~~~~~~~~ey~~fy~~~~~~~~~pl~~~h~~~eg~~~~~~ll~iP~~~p~~~~~~~~~~~~i~lYv~~v~I~d 347 (702)
.+|||+|++++||+++|++||+.++++|++||+|+||++||+++|+||||||+.+|+++|..+..++||+||||||||+|
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~~~~~~ikLY~~rVfI~d 81 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 81 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEEES
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhhhhcCCeEEEEEeeeecc
Confidence 47999999999999999999999999999999999999999999999999999999999975556789999999999999
Q ss_pred cccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHhHHhhccccCC
Q 005321 348 NCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHED 427 (702)
Q Consensus 348 ~~~~llP~~l~Fv~gvVDs~dLplnvSRE~lq~~~~l~~i~~~l~~k~l~~l~~la~d~~~y~~f~~~~~~~lK~g~~eD 427 (702)
+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|+++++|+++|.+||++||.+||+||++|
T Consensus 82 ~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~d~eky~~fw~~fg~~lK~G~~~D 161 (256)
T d1usua_ 82 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 161 (256)
T ss_dssp CCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHhHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhchhcceecCCCCcccCHHHHHHhhccCCceEEEEeCCCHHHHhcChhHHHHHHcCCEEEEeCCCchHHHHHH
Q 005321 428 SQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQ 507 (702)
Q Consensus 428 ~~~~~~l~~lLrf~ts~~~~~~~SL~eYv~rm~~~Q~~IyY~~~~~~~~~~~sp~~e~~~~~g~eVL~l~d~iDE~~l~~ 507 (702)
.+|++++++||||+||.+.++++||+||++||+++|+.|||++|++++++++|||+|+|+++|||||+|+|||||+|+++
T Consensus 162 ~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~~i~~ 241 (256)
T d1usua_ 162 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 241 (256)
T ss_dssp TTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHHHHHH
Confidence 99999999999999998777899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCcceEeeccc
Q 005321 508 LKEYDGKKLVSATKE 522 (702)
Q Consensus 508 l~~~~g~~~~~v~~~ 522 (702)
|.+|+|++|+||+++
T Consensus 242 l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 242 LKEFEGKTLVDITKD 256 (256)
T ss_dssp HCEETTEEEEETTCC
T ss_pred HHHhCCCceeecCCC
Confidence 999999999999874
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
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| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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