Citrus Sinensis ID: 005484

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690----
Protein Sequence
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHEEEEEcccEEEEEEccccccccccccccccccccEEEcccccccEEEEEEccccEEEEEccccccccccccccEEEEEEccccccccccccccEEEEEcccccccccccccEEEEEEEEEccEEEEEEccccccHHcccccccccccccEEEEEEEEEccEEEEccEEEEEEEEEEccccccccccHHHcccccccHHHHHccccccHHccccccccccEEEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEcEEHHHHcccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccEEcccccEEEEEccccEEEEEcccccEEEEEEcccccEEEEccccccEEEEEEEccccccEEEEEcccccccccEEEEEEcccccccEEEEcccccccccccccccccccccccccccccEEEccEEEEccccccccccccccEEEEEcccEEEEEcccccccccEEEEEEcccccccccccccccccccEEEccEEEEEEcccccccEEEEEEcEEEEEEcccccEEEEEEcccccccccEEEEccccccccEEEEcccEEEEEEEEEccccHHHHHHHHHHHHHHHHHEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHcccccccccccccccccEEEEcccccccEEEEEccccEEEEEcccccccccccccccEEEEEcccccccEccccccEEEEEccccccccccccccEEEEEEEEcccEEEEEcccHHHHHHHHHHHcccccccEEEEEEEEEccEccccccEEEEEEEEEEccccccccccccccccHHHHHHHcccHHHHHccccccccccccEEEEEEEcccccEEEEEcccccccccccHHHccccccccHcHHHHcccccccccHHHHHHHHcccccccccccEEEHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccEEEEEccccEEEEEEccccEEEEEEccccccEEEcccccEEEEEEEEEccccccEccccccccccccEEEEEcccccHHHHccccccccccccccccccccccccccccccccEEccccEEEcccccccccccccEEEEEEcccEEEEEccccccccEEEEEEEEcccccccccccccccccccccccEEEEEEcccccccEEEEEcccEEEEEcccccEEEEEEccccccccEEEEEcccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHlseeypikfdadrlpppivadlngdgrKEVLVATHDAkiqvlepharrvdeGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVidrtyrqgqplKQVLVVVTSGWSVMCFDHNLNKLWEanlqedfppnahhREIAISISnytlkhgdtglvivggrmemqphtimdpfeeiGLAEKNAEQHRRsasekeasensgtvdlrHFAFYAFAGrsgllrwsrknenieaqptdasqlipqhnykldvhalnsrhpgeveFRESvlgvmphhwdrrEDTLLKLSHFRRHKRKILKKVVgkstsypfhkpeehhppgkdstkKISNLIGKAATyagsakskkpvnyiptitnytqlwwvpNVVVAHQKEGIEAVHLASGRTVCKLHLqegglhadingdgVLDHVqavggngaeqtvvsgsmevlrpcwavatsgvpvreqlfnasichhspfnlfphgefsrnfgrtsdvaslevatpiliprsdghrhrkgshgdvvfltnrgevtayspglhghdAIWQWQLLtdatwsnlpspsgmteastvvptlkafslRVHDNQQMilaggdqeavvispggsiltsidlpappthalvcedfsndgltdVILMTSNGvygfvqtrqpgaLFFSTLVGCLIVVMGVIFVTQHlnsvkakprassglr
Flexible Loop (DISEMBL)
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHdakiqvlepharrVDEGFSEARVLaevsllpdkiriasgrRAVAMATGvidrtyrqgqplKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSasekeasensgtvdLRHFAFYAFAGRSGLLRWSRKNENIEAqptdasqlipqHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTllklshfrrhkrkilkkvvgkstsypfhkpeehhppgkdsTKKISNLIGKAAtyagsakskkpvnYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPIliprsdghrhrkgshgdvVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTqhlnsvkakprassglr
Low Complexity Region (SEG)
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR
Disordered region (IsUnstruct)
*****LAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIM*******************************VDLRHFAFYAFAGRSGLLRWSR***************IPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRKILKKVV********************************ATY*******KPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIP***********HGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNL*********STVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHLN*************
Disordered Region (DISOPRED)
*RKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTY***QPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGL***************************HFAFYAFAGRSGLLRWS****************IPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSH******************************************************************YTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVG*************EVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEF*************EVATPILI**********GSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATW*************TVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIF*******************
Disordered Region (DISEMBL)
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEK******************GTVDLRHFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHK***********TKKISNLIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLP*********TVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHL**************
Disordered Region (DISPRO)
*RKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTI*****************R***************DLRHFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRK*************************************************PVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHLN*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	694
255585207	1050	aldehyde dehydrogenase, putative [Ricinu	0.966	0.639	0.896	0.0
359476651	696	PREDICTED: uncharacterized protein LOC10	0.998	0.995	0.873	0.0
224134190	693	predicted protein [Populus trichocarpa]	0.992	0.994	0.856	0.0
224094889	679	predicted protein [Populus trichocarpa]	0.976	0.998	0.838	0.0
356496701	697	PREDICTED: uncharacterized protein LOC10	0.998	0.994	0.822	0.0
356538246	693	PREDICTED: uncharacterized protein LOC10	0.994	0.995	0.816	0.0
449464520	686	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.981	0.992	0.824	0.0
297816364	698	FG-GAP repeat-containing protein [Arabid	0.998	0.992	0.797	0.0
22331734	698	FG-GAP repeat-containing protein [Arabid	0.998	0.992	0.795	0.0
18087608	698	AT3g51050/F24M12_90 [Arabidopsis thalian	0.998	0.992	0.793	0.0

>gi|255585207|ref|XP_002533306.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223526871|gb|EEF29083.1| aldehyde dehydrogenase, putative [Ricinus communis]

 Score = 1286 bits (3327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/676 (89%), Positives = 643/676 (95%), Gaps = 5/676 (0%)

Query: 20   LQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPH 79
            +QHEGDFSFREAWFHLS+EYPIK++ADRLPPPIVADLNGDG+KEVLVATHDAKIQVLEPH
Sbjct: 372  VQHEGDFSFREAWFHLSDEYPIKYEADRLPPPIVADLNGDGKKEVLVATHDAKIQVLEPH 431

Query: 80   ARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSG 139
            +RRVDEGFSEARVLAEVSLLPDKIR+ASGRRAVAMA GVIDRTY+QGQPLKQVLVV+TSG
Sbjct: 432  SRRVDEGFSEARVLAEVSLLPDKIRVASGRRAVAMAAGVIDRTYKQGQPLKQVLVVITSG 491

Query: 140  WSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHT 199
            WSVMCFDHNL KLWEANLQEDFP NAHHREIAISISNYTL+HGDTGLV+VGGRMEMQPH 
Sbjct: 492  WSVMCFDHNLKKLWEANLQEDFPHNAHHREIAISISNYTLRHGDTGLVLVGGRMEMQPHV 551

Query: 200  IM--DPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNE 257
             +  DPFEEIG AEKNAE HRRSASEKEA+ENSGTVDLRHFAFYAFAGR+G LRWSRKNE
Sbjct: 552  YLELDPFEEIGTAEKNAEFHRRSASEKEATENSGTVDLRHFAFYAFAGRTGALRWSRKNE 611

Query: 258  NIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVLGVMPHHWDRREDTLLKL 314
            NIEAQP+DASQLIPQHNYKLDVHALNSRHPGE E   FRES+LGVMPHHWDRREDT LKL
Sbjct: 612  NIEAQPSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESILGVMPHHWDRREDTQLKL 671

Query: 315  SHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPV 374
            SHFRRHKRK LKKV GK+ +YPFHKPEE+HPPGKDSTKKIS +IGKAA YAGSAKSKKP 
Sbjct: 672  SHFRRHKRKTLKKVPGKTINYPFHKPEENHPPGKDSTKKISKIIGKAANYAGSAKSKKPF 731

Query: 375  NYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHADINGDGVLDH 434
             YIPTITNYTQLWWVPNVVVAHQKEGIEAVHLA+GRT+CKLHL EGGLHADINGDGVLDH
Sbjct: 732  PYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLATGRTLCKLHLLEGGLHADINGDGVLDH 791

Query: 435  VQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRN 494
            VQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLF HGEFSRN
Sbjct: 792  VQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHHSPFNLFQHGEFSRN 851

Query: 495  FGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAYSPGLHGHDAIWQWQ 554
            FGRTSD +SLEVA+PILIPRSDGH+HRKGSHGDV+FLTNRGEVT+YSPGLHGHDAIWQWQ
Sbjct: 852  FGRTSDASSLEVASPILIPRSDGHKHRKGSHGDVIFLTNRGEVTSYSPGLHGHDAIWQWQ 911

Query: 555  LLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISPGGSILTS 614
            LLTDATWSNLPSPSGM E   VVPTLKAFSLR+HDNQQMILA GDQEAVVISPGGSI T+
Sbjct: 912  LLTDATWSNLPSPSGMMEGGMVVPTLKAFSLRMHDNQQMILAAGDQEAVVISPGGSIQTT 971

Query: 615  IDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVI 674
            IDLPAPPTHAL+CEDFS+DGLTD+I++TSNGVYGFVQTR PGALFFSTLVGCL++VMGVI
Sbjct: 972  IDLPAPPTHALICEDFSSDGLTDLIVVTSNGVYGFVQTRTPGALFFSTLVGCLLIVMGVI 1031

Query: 675  FVTQHLNSVKAKPRAS 690
            FVTQHLNS+K KPRAS
Sbjct: 1032 FVTQHLNSIKGKPRAS 1047

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476651|ref|XP_002273723.2| PREDICTED: uncharacterized protein LOC100264247 [Vitis vinifera] gi|297735064|emb|CBI17426.3| unnamed protein product [Vitis vinifera]

 Score = 1285 bits (3326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/697 (87%), Positives = 655/697 (93%), Gaps = 4/697 (0%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAFAIFFSLQHEGDFSF+EAWFHLS+EYPIK++A+RLPPP+VADLNGDG
Sbjct: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFKEAWFHLSDEYPIKYEAERLPPPLVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVATHDAKIQVLEPHARRVDEGFSEARVL EVSLLPDKIRI+SGRRAVAMATGV+D
Sbjct: 61  KKEVLVATHDAKIQVLEPHARRVDEGFSEARVLVEVSLLPDKIRISSGRRAVAMATGVVD 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+QGQP KQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFP NAHHREIAISISNYTLK
Sbjct: 121 RHYKQGQPQKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPHNAHHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGD GLVIVGGRMEM PH  MDPFE IG+ EKNAEQHRRSA+EKEASEN+GTVDLRHFAF
Sbjct: 181 HGDAGLVIVGGRMEMLPHIYMDPFEVIGMTEKNAEQHRRSANEKEASENAGTVDLRHFAF 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
           YAFAGRSG +RW RKNENI+   +DASQLIPQHNYKLD HALN+RHPGE E   FRES+L
Sbjct: 241 YAFAGRSGAVRWMRKNENIQTLSSDASQLIPQHNYKLDAHALNTRHPGEFECREFRESIL 300

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNL 357
           GVMPHHWDRREDTLLKL+HFRRHKRK LKK  GKST+YPFHKPEE+HPPGKD TKKISNL
Sbjct: 301 GVMPHHWDRREDTLLKLAHFRRHKRKTLKKTQGKSTNYPFHKPEENHPPGKDDTKKISNL 360

Query: 358 IGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHL 417
           IGKAA YA SAKSKKP+ Y+PTITNYTQLWWVPNVVVAHQ+EGIEAVHL +GRT+CKLHL
Sbjct: 361 IGKAAKYASSAKSKKPLPYVPTITNYTQLWWVPNVVVAHQREGIEAVHLPTGRTICKLHL 420

Query: 418 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 477
           QEGGLHADINGDGVLDHVQ VGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI
Sbjct: 421 QEGGLHADINGDGVLDHVQVVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 480

Query: 478 CHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEV 537
           CHHSPFNLF HGEFSR+F RT D+ SLEVATPILIPR+DGHRHRKGSHGD++FLTNRGEV
Sbjct: 481 CHHSPFNLFQHGEFSRSFSRTPDLGSLEVATPILIPRNDGHRHRKGSHGDIIFLTNRGEV 540

Query: 538 TAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAG 597
           T+YSPGLHGHDAIWQWQLLT ATWSNLPSPSGM E S VVPTLKAFSLR HDN+++ILA 
Sbjct: 541 TSYSPGLHGHDAIWQWQLLTGATWSNLPSPSGMME-SMVVPTLKAFSLRAHDNRELILAA 599

Query: 598 GDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGA 657
           GDQEA+++SPGGS+LTS++LPA PTHAL+CEDFSNDGLTD+IL+TSNGVYGFVQTRQPGA
Sbjct: 600 GDQEAIMMSPGGSLLTSVELPAAPTHALICEDFSNDGLTDLILVTSNGVYGFVQTRQPGA 659

Query: 658 LFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR 694
           LFFSTLVGCLIVVMGVIFVTQ+LNS+K KPRASSG R
Sbjct: 660 LFFSTLVGCLIVVMGVIFVTQYLNSMKGKPRASSGPR 696

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134190|ref|XP_002327778.1| predicted protein [Populus trichocarpa] gi|222836863|gb|EEE75256.1| predicted protein [Populus trichocarpa]

 Score = 1256 bits (3249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/698 (85%), Positives = 644/698 (92%), Gaps = 9/698 (1%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAF+IFFSLQHEGDFSFREAWFHL++EYPIK++ +RLPPPIV+DLNGDG
Sbjct: 1   MRKRDLAILMLSAFSIFFSLQHEGDFSFREAWFHLTDEYPIKYETERLPPPIVSDLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KE+LVATHDAKIQVLEPH RRVDEGFSEAR+L E+SLLPDK R+A+GRRAVAMATGVID
Sbjct: 61  KKEILVATHDAKIQVLEPHLRRVDEGFSEARLLTELSLLPDKTRVATGRRAVAMATGVID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y++G PLKQVLVVVTSGWSVMCFDHNL KLWE NLQEDFP NAHHREIAISISNYTLK
Sbjct: 121 RRYKEGHPLKQVLVVVTSGWSVMCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGD+GLVI+GGRMEMQPH   DPFEEIG+AEKNAEQHRRSASEKE SENSGTV+LRHFA 
Sbjct: 181 HGDSGLVIIGGRMEMQPHIYSDPFEEIGMAEKNAEQHRRSASEKEPSENSGTVNLRHFAL 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEV---EFRESVL 297
           YAFAGR+G LRWSRKNE+ +A    ASQLIPQHNYKLDVHALNSRHPGE    EFRES+L
Sbjct: 241 YAFAGRTGALRWSRKNESSDA----ASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 296

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNL 357
           GVMPHHWDRREDT+L+LSHFRRHKRK  KK  GK+T+YPFHKPEE+HPPGKDS KKISNL
Sbjct: 297 GVMPHHWDRREDTVLQLSHFRRHKRKTSKKSNGKTTNYPFHKPEENHPPGKDSAKKISNL 356

Query: 358 IGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHL 417
           IG+AA YAGS KSKKP  YIPTITNYTQLWW+PNVVVAHQKEGIEAVHLASGRT+CKLHL
Sbjct: 357 IGEAAKYAGSTKSKKPFQYIPTITNYTQLWWLPNVVVAHQKEGIEAVHLASGRTLCKLHL 416

Query: 418 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 477
           QEGGLHADINGDGVLDHVQAVGGNGAEQTV+SGSMEVL+PCWAVATSGVPVREQLFNASI
Sbjct: 417 QEGGLHADINGDGVLDHVQAVGGNGAEQTVISGSMEVLQPCWAVATSGVPVREQLFNASI 476

Query: 478 C-HHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGE 536
           C HHSP NLF HG+F RNFGRT DV+SLEVATPILIPR DGHRHRKGSHGDVVFLTNRGE
Sbjct: 477 CHHHSPLNLFQHGDFGRNFGRT-DVSSLEVATPILIPRGDGHRHRKGSHGDVVFLTNRGE 535

Query: 537 VTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA 596
           VT+YSPGLHGHDA+WQWQ+ T ATWSNLPSPSGM E   VVPTLKAFSLR  DNQQMILA
Sbjct: 536 VTSYSPGLHGHDAVWQWQISTGATWSNLPSPSGMMEGGMVVPTLKAFSLRARDNQQMILA 595

Query: 597 GGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPG 656
            GDQEA VISPGGSI TS+DLPAPPTHAL+CEDFSNDGLTD+I++TSNGVYGFVQTR PG
Sbjct: 596 AGDQEASVISPGGSIQTSVDLPAPPTHALICEDFSNDGLTDLIVVTSNGVYGFVQTRSPG 655

Query: 657 ALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR 694
           ALFFSTLVGCL++VMGVIFVTQHLNS+K KPRASS  R
Sbjct: 656 ALFFSTLVGCLLIVMGVIFVTQHLNSIKEKPRASSAAR 693

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094889|ref|XP_002310280.1| predicted protein [Populus trichocarpa] gi|222853183|gb|EEE90730.1| predicted protein [Populus trichocarpa]

 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/695 (83%), Positives = 637/695 (91%), Gaps = 17/695 (2%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAF+IFFSLQHEGDFSFREAWFHL+++YPIK++ DRLPPPIV+DLNGDG
Sbjct: 1   MRKRDLAILMLSAFSIFFSLQHEGDFSFREAWFHLTDDYPIKYETDRLPPPIVSDLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KE+LVATHDAKI VLEPH+RRVDEGFSEAR+L E+SLLPDK R+A+GRRAVAMATGVI+
Sbjct: 61  KKEILVATHDAKILVLEPHSRRVDEGFSEARLLTELSLLPDKTRVATGRRAVAMATGVIE 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y++G PLKQVLVVVTSGWSVMCFDHNL KLWE N+QEDFP NAHHREIAISISNYTLK
Sbjct: 121 RRYKEGHPLKQVLVVVTSGWSVMCFDHNLKKLWETNVQEDFPHNAHHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGD GLVI+GGRME+QPH  +DPFEEIG+AEKNAEQHRRSA EKE SENSGTV+LRHFA 
Sbjct: 181 HGDMGLVIIGGRMEVQPHNYLDPFEEIGMAEKNAEQHRRSAGEKEPSENSGTVNLRHFAL 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTD-ASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGV 299
           YAFAGR+G +RWSRKNENIEA+ +D ASQLIPQHNYKLDVHALNSRHPGE          
Sbjct: 241 YAFAGRTGTVRWSRKNENIEAESSDAASQLIPQHNYKLDVHALNSRHPGE---------- 290

Query: 300 MPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIG 359
                DRREDT+L+LSHFRRHKRK  KK  GK+++YPFHKPEE+HPPGKD+TKKISNLIG
Sbjct: 291 -----DRREDTVLQLSHFRRHKRKTSKKSNGKNSNYPFHKPEENHPPGKDTTKKISNLIG 345

Query: 360 KAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQE 419
           KAA YA S KSKKP  YIPTITNYTQLWWVPNVVVAHQKEGIEA+HLASGRT+CKLHLQE
Sbjct: 346 KAAKYASSTKSKKPSQYIPTITNYTQLWWVPNVVVAHQKEGIEAIHLASGRTLCKLHLQE 405

Query: 420 GGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICH 479
           GGLHADINGDGVLDHVQAVGGNGAE+TVVSG+MEVL+PCWAVATSGVPVREQLFNASICH
Sbjct: 406 GGLHADINGDGVLDHVQAVGGNGAEKTVVSGAMEVLQPCWAVATSGVPVREQLFNASICH 465

Query: 480 HSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTA 539
           HSPFNLF HG+F RNFGRT DV+SLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVT+
Sbjct: 466 HSPFNLFQHGDFGRNFGRT-DVSSLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTS 524

Query: 540 YSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGD 599
           YSPGLHGHDA+WQWQ+LT ATWSNLPSPSGM E   VVPTLKAFSLR HDNQQMILA GD
Sbjct: 525 YSPGLHGHDAVWQWQILTGATWSNLPSPSGMMEGGMVVPTLKAFSLRAHDNQQMILAAGD 584

Query: 600 QEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALF 659
           QEA VISPGGS+ TS DLPAPPTHAL+CEDF+NDGL D+I++TSNGVYGFVQTR PGALF
Sbjct: 585 QEAAVISPGGSVQTSFDLPAPPTHALICEDFTNDGLPDLIVVTSNGVYGFVQTRSPGALF 644

Query: 660 FSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR 694
           FSTLVGCL++VMGVIFVTQH+NS+K KPRASSGLR
Sbjct: 645 FSTLVGCLLIVMGVIFVTQHINSIKGKPRASSGLR 679

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496701|ref|XP_003517204.1| PREDICTED: uncharacterized protein LOC100787497 [Glycine max]

 Score = 1214 bits (3141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/698 (82%), Positives = 633/698 (90%), Gaps = 5/698 (0%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAFAIFF+LQ +G  SF++AW HL++EYPIK++A+RLPPP+VADLNGDG
Sbjct: 1   MRKRDLAILMLSAFAIFFTLQQDGGISFKDAWMHLTDEYPIKYEAERLPPPLVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVATHDAKIQVLEPH+RRVDEGFSEARVLAEVSLLPDK+R+ +GRR VAMATG ID
Sbjct: 61  KKEVLVATHDAKIQVLEPHSRRVDEGFSEARVLAEVSLLPDKVRVMTGRRPVAMATGYID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+ GQP KQVLVVVTSGWSVMCFD NL KLWE NLQEDFP NAHHRE+AISISNYTLK
Sbjct: 121 R-YKIGQPQKQVLVVVTSGWSVMCFDSNLQKLWENNLQEDFPHNAHHREVAISISNYTLK 179

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGDTGL+IVGGRMEMQPH  MDPFEE+G+  + AEQHRRSA+EKEASENSGTVDLRHFAF
Sbjct: 180 HGDTGLIIVGGRMEMQPHIFMDPFEEMGMGARFAEQHRRSAAEKEASENSGTVDLRHFAF 239

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
           YAFAGRSG+ RWSRKNENIE   +DASQL+PQHNYKLDVHALN+R PGE E   FRES+L
Sbjct: 240 YAFAGRSGVERWSRKNENIEVHSSDASQLLPQHNYKLDVHALNTRQPGEYECREFRESIL 299

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNL 357
           GVMPH W RREDTLLKL+HFRRHKRK LKK  GK+ SYPFHKPEE+HPPGKDSTKKISN+
Sbjct: 300 GVMPHQWARREDTLLKLAHFRRHKRKTLKKTPGKAMSYPFHKPEENHPPGKDSTKKISNI 359

Query: 358 IGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHL 417
           IGKAA YAGSAKSKK + Y+PTITNYTQ+WWVPNVVVAHQKEGIEA+HLASGRT+CKLHL
Sbjct: 360 IGKAANYAGSAKSKKHLPYVPTITNYTQVWWVPNVVVAHQKEGIEALHLASGRTICKLHL 419

Query: 418 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 477
           QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWA+ATSGVP+REQLFN SI
Sbjct: 420 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAIATSGVPIREQLFNVSI 479

Query: 478 CHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEV 537
           CH++ FNLF HGE  R++ + SD+ASLEVATPILIPRSDGHRHRKGSHGDV+FLTNRGE+
Sbjct: 480 CHYTHFNLFQHGELYRSYSQGSDIASLEVATPILIPRSDGHRHRKGSHGDVIFLTNRGEI 539

Query: 538 TAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTE-ASTVVPTLKAFSLRVHDNQQMILA 596
           T+YSPGLHGHDAIWQWQ  T  TWSNLPSPSG+ E    V+PTLK  SLR+HDNQ+MILA
Sbjct: 540 TSYSPGLHGHDAIWQWQQSTGVTWSNLPSPSGVMEGGGLVIPTLKPLSLRLHDNQEMILA 599

Query: 597 GGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPG 656
            G+QEAV+ISPGGS+L +I+LP PPTH L+ EDFSNDGLTD+IL+TSNGVYGFVQTRQPG
Sbjct: 600 AGEQEAVIISPGGSLLATIELPGPPTHVLIAEDFSNDGLTDLILVTSNGVYGFVQTRQPG 659

Query: 657 ALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR 694
           ALFFS LVGCLIVVMGVIFVTQHLNS K KPR SSG R
Sbjct: 660 ALFFSMLVGCLIVVMGVIFVTQHLNSTKGKPRPSSGSR 697

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538246|ref|XP_003537615.1| PREDICTED: uncharacterized protein LOC100789851 [Glycine max]

 Score = 1200 bits (3105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/697 (81%), Positives = 628/697 (90%), Gaps = 7/697 (1%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAFAIFF+LQ +G  SF++AW HL++EYPIK++A+RLPPP+VADLNGDG
Sbjct: 1   MRKRDLAILMLSAFAIFFTLQQDGGISFKDAWMHLTDEYPIKYEAERLPPPLVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVATHDAKIQVLEPH+RRVDEGFSEARVLAEVSLLPDK+R+ +GRR VAMATG ID
Sbjct: 61  KKEVLVATHDAKIQVLEPHSRRVDEGFSEARVLAEVSLLPDKVRVMTGRRPVAMATGYID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+ GQP KQVLVVVTSGWSVMCFD NL KLWE NLQEDFP NAHHRE+AISISNYTLK
Sbjct: 121 R-YKIGQPQKQVLVVVTSGWSVMCFDSNLQKLWENNLQEDFPHNAHHREVAISISNYTLK 179

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGDTGL+IVGGRMEMQPH  MDPFEE+G+  + AEQH+RSA+EKEAS   GTVDLRHFAF
Sbjct: 180 HGDTGLIIVGGRMEMQPHIFMDPFEEMGMGARFAEQHQRSAAEKEAS---GTVDLRHFAF 236

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
           YAFAGRSG  RWSRKNENIEA  +DASQL+PQHNYKLDVHALN+R PGE E   FRES+L
Sbjct: 237 YAFAGRSGDERWSRKNENIEAHSSDASQLLPQHNYKLDVHALNTRQPGEFECREFRESIL 296

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNL 357
           GVMPH W RREDTL KL+HFRRHKRK LKK  GK+ SYPFHKPEE+HPPGKDSTKKISN+
Sbjct: 297 GVMPHQWARREDTLFKLAHFRRHKRKALKKTPGKAISYPFHKPEENHPPGKDSTKKISNI 356

Query: 358 IGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHL 417
           IGKAA+YAGSAKSKK + Y+PTITNYTQ+WWVPNVVV+HQKEGIEA+HLA+GRT+CK HL
Sbjct: 357 IGKAASYAGSAKSKKHLPYVPTITNYTQVWWVPNVVVSHQKEGIEALHLATGRTICKFHL 416

Query: 418 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 477
           QEGGLHAD+NGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFN SI
Sbjct: 417 QEGGLHADVNGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNVSI 476

Query: 478 CHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEV 537
           CH++ FNLF HGE  R++ + SD ASLEVATPILIPRSDGHRHRKGSHGDV+FLTNRGE+
Sbjct: 477 CHYTHFNLFQHGELYRSYSQGSDTASLEVATPILIPRSDGHRHRKGSHGDVIFLTNRGEI 536

Query: 538 TAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAG 597
           T+YSPGLHGHDAIWQWQ  T  TWSNLPSPSGM E   V+PTLK  SLR+HDNQ+MILA 
Sbjct: 537 TSYSPGLHGHDAIWQWQQSTGVTWSNLPSPSGMMEGGLVIPTLKPLSLRLHDNQEMILAA 596

Query: 598 GDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGA 657
           G+QEAV+ISPGGSIL +I+LP PPTH L+ EDFSNDGLTD+IL+TS+GVYGFVQTRQPGA
Sbjct: 597 GEQEAVIISPGGSILATIELPGPPTHVLITEDFSNDGLTDLILVTSHGVYGFVQTRQPGA 656

Query: 658 LFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR 694
           LFFS LVGCLIVVMGVIFVTQHLNS K KPR SSG R
Sbjct: 657 LFFSMLVGCLIVVMGVIFVTQHLNSTKGKPRPSSGPR 693

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464520|ref|XP_004149977.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101223217 [Cucumis sativus]

 Score = 1200 bits (3105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/694 (82%), Positives = 628/694 (90%), Gaps = 13/694 (1%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLSAFAIFFSLQHEGDFSFREAW HL++EYPIK++ DRLPPP+VADLNGDG
Sbjct: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWMHLTDEYPIKYEGDRLPPPVVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVATHDAKI VLEPH+RRVDEGFS ARV          +RI+SGRR VAMATGVID
Sbjct: 61  KKEVLVATHDAKILVLEPHSRRVDEGFSHARV---------XVRISSGRRPVAMATGVID 111

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R  RQGQP+ QVLVVVTSGWSV+CFDHNLNKLWEANLQEDFP NAHHREIAISI+NYTLK
Sbjct: 112 RHPRQGQPVTQVLVVVTSGWSVLCFDHNLNKLWEANLQEDFPHNAHHREIAISITNYTLK 171

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGD+GL+IVGGRMEMQ H  MDPFEEIG+AEKNAEQHRRSA+EKEASENSG++DLRHFAF
Sbjct: 172 HGDSGLIIVGGRMEMQSHIFMDPFEEIGIAEKNAEQHRRSATEKEASENSGSIDLRHFAF 231

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
           YAFAGRSGL RWSRKNENIEA  +DASQLIPQHNYKLDVH+LN+RHPGE E   FRES+L
Sbjct: 232 YAFAGRSGLPRWSRKNENIEAHSSDASQLIPQHNYKLDVHSLNARHPGEFECREFRESIL 291

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNL 357
           GVMPHHWDRREDT+L+L+HFRRHKRK LKK  GKS +YPFHKPEE+HPPGKDS+K+I  +
Sbjct: 292 GVMPHHWDRREDTVLELAHFRRHKRKALKKTSGKSVNYPFHKPEENHPPGKDSSKRIPKI 351

Query: 358 IGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHL 417
           IG AA  AGSAK+KKP+ Y+PTITNYT+LWW+PNVVVAHQKEGIEA+HLASGRT+CKLHL
Sbjct: 352 IGTAANIAGSAKTKKPLPYVPTITNYTKLWWLPNVVVAHQKEGIEALHLASGRTICKLHL 411

Query: 418 QEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASI 477
           QEGGLHADINGDGVLDHVQAVGGNGAE+TVVSGSMEV++PCWAVATSGVPVREQLFNASI
Sbjct: 412 QEGGLHADINGDGVLDHVQAVGGNGAERTVVSGSMEVIQPCWAVATSGVPVREQLFNASI 471

Query: 478 CHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEV 537
           CH SPFN F HGE SR FGRT D+ASLEVATPILI R DGHRHRKGSHGDVVFLTNRGEV
Sbjct: 472 CHFSPFNYFQHGELSR-FGRTPDMASLEVATPILISRKDGHRHRKGSHGDVVFLTNRGEV 530

Query: 538 TAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAG 597
           T+YSPGLHGH A WQWQ+ T ATWSNLPSPSGM +A TV+PTLKA  LRV   Q+M+LA 
Sbjct: 531 TSYSPGLHGHGADWQWQITTGATWSNLPSPSGMMDAGTVIPTLKAIDLRVGATQEMVLAA 590

Query: 598 GDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGA 657
           G+QEAVVISPGGS+  SI+LPA PTHAL+ EDFSNDGLTD+IL+TS GVYGFVQTRQPGA
Sbjct: 591 GEQEAVVISPGGSVQASIELPASPTHALITEDFSNDGLTDIILVTSTGVYGFVQTRQPGA 650

Query: 658 LFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASS 691
           LFFSTLVGCLI+VMGVIFVTQHLNS+K KPR S+
Sbjct: 651 LFFSTLVGCLILVMGVIFVTQHLNSIKGKPRPSA 684

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816364|ref|XP_002876065.1| FG-GAP repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297321903|gb|EFH52324.1| FG-GAP repeat-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/698 (79%), Positives = 630/698 (90%), Gaps = 5/698 (0%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLS FAIFF+LQHEGDF+F+EAWFHL +EYP+K++ADRLPPPIVADLNGDG
Sbjct: 1   MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVAT+DAKIQVLEPH+RRVDEGFSEARVLAE+ LLPDKIRIASGRRAVAMATGVID
Sbjct: 61  KKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEIPLLPDKIRIASGRRAVAMATGVID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+ G P KQV+VVVTSGWSV+CFDHNL KLWE NLQEDFP NAHHREIAISISNYTLK
Sbjct: 121 RYYKDGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGDTGLVIVGGRMEMQP+  MDPFEE+G+  +NAEQHRRSA+E +ASE+SG ++LRHF+ 
Sbjct: 181 HGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNAEQHRRSATENQASEDSGAINLRHFSV 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEV---EFRESVL 297
           YAFAG++GLLRWS+K +++EA  +DASQLIPQHNYKLDVHALNSRHPGE    EFRES+L
Sbjct: 241 YAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 300

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVG-KSTSYPFHKPEEHHPPGKDSTKKISN 356
            VMPHHWDRREDTLLKL+HFRRHKRK LKK  G KST+YPFHKPEEH P GKD ++KI  
Sbjct: 301 SVMPHHWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPK 360

Query: 357 LIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLH 416
           LIGKAA YAGSAK KK + YIPTITNYT+LWWVPNVVVAHQKEGIEA+HL +GRT+CKL 
Sbjct: 361 LIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLS 420

Query: 417 LQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNAS 476
           L EGGLHADINGDGVLDHVQ VGGN  E+TVVSGSMEVL+PCWAVATSGVP+REQLFN S
Sbjct: 421 LLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVS 480

Query: 477 ICHHSPFNLFPH-GEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRG 535
           ICHHSPFN   + G++SR+F +  D ++LE+ATPILIPR DGH+HR+GSHGDV+FLTNRG
Sbjct: 481 ICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRRGSHGDVIFLTNRG 540

Query: 536 EVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL 595
           EVT+Y+P +HGHDA+WQWQL T+ATWSNLPSPSG+TE+ TVVPTLK FSLR+HDNQ MIL
Sbjct: 541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMIL 600

Query: 596 AGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQP 655
           AGGDQ AV+ISPGGSIL SI+LP+ PTHAL+ +DFSNDGLTDVI+MTSNGVYGFVQTRQP
Sbjct: 601 AGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQP 660

Query: 656 GALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGL 693
           GALFFS+LVGCL+VVM VIFVTQHLNS++ KPR SS  
Sbjct: 661 GALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSSSF 698

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331734|ref|NP_190674.2| FG-GAP repeat-containing protein [Arabidopsis thaliana] gi|332645222|gb|AEE78743.1| FG-GAP repeat-containing protein [Arabidopsis thaliana]

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/698 (79%), Positives = 630/698 (90%), Gaps = 5/698 (0%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLS FAIFF+LQHEGDF+F+EAWFHL +EYP+K++ADRLPPPIVADLNGDG
Sbjct: 1   MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVAT+DAKIQVLEPH+RRVDEGFSEARVLAE++LLPDKIR+ASGRRAVAMATGVID
Sbjct: 61  KKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEITLLPDKIRVASGRRAVAMATGVID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+ G P KQV+VVVTSGWSV+CFDHNL KLWE NLQEDFP NAHHREIAISISNYTLK
Sbjct: 121 RYYKNGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGDTGLVIVGGRMEMQP+  MDPFEE+G+  +NA+QHRRSA+E +ASE+SG ++LRHF+ 
Sbjct: 181 HGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNADQHRRSATENQASEDSGAINLRHFSV 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEV---EFRESVL 297
           YAFAG++GLLRWS+K +++EA  +DASQLIPQHNYKLDVHALNSRHPGE    EFRES+L
Sbjct: 241 YAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 300

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVG-KSTSYPFHKPEEHHPPGKDSTKKISN 356
            VMPH WDRREDTLLKL+HFRRHKRK LKK  G KST+YPFHKPEEH P GKD ++KI  
Sbjct: 301 SVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPK 360

Query: 357 LIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLH 416
           LIGKAA YAGSAK KK + YIPTITNYT+LWWVPNVVVAHQKEGIEA+HL +GRT+CKL 
Sbjct: 361 LIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLS 420

Query: 417 LQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNAS 476
           L EGGLHADINGDGVLDHVQ VGGN  E+TVVSGSMEVL+PCWAVATSGVP+REQLFN S
Sbjct: 421 LLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVS 480

Query: 477 ICHHSPFNLFPH-GEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRG 535
           ICHHSPFN   + G++SR+F +  D ++LE+ATPILIPR DGH+HRKGSHGDV+FLTNRG
Sbjct: 481 ICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRKGSHGDVIFLTNRG 540

Query: 536 EVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL 595
           EVT+Y+P +HGHDA+WQWQL T+ATWSNLPSPSG+TE+ TVVPTLK FSLR+HDNQ MIL
Sbjct: 541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMIL 600

Query: 596 AGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQP 655
           AGGDQ AV+ISPGGSIL SI+LP+ PTHAL+ +DFSNDGLTDVI+MTSNGVYGFVQTRQP
Sbjct: 601 AGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQP 660

Query: 656 GALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGL 693
           GALFFS+LVGCL+VVM VIFVTQHLNS++ KPR SS  
Sbjct: 661 GALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSSSF 698

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18087608|gb|AAL58934.1|AF462847_1 AT3g51050/F24M12_90 [Arabidopsis thaliana] gi|24797020|gb|AAN64522.1| At3g51050/F24M12_90 [Arabidopsis thaliana]

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/698 (79%), Positives = 629/698 (90%), Gaps = 5/698 (0%)

Query: 1   MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
           MRKRDLAILMLS FAIFF+LQHEGDF+F+EAWFHL +EYP+K++ADRLPPPIVADLNGDG
Sbjct: 1   MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDG 60

Query: 61  RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
           +KEVLVAT+DAKIQVLEPH+RRVDEGFSEARVLAE++LLPDKIR+ASGRRAVAMATGVID
Sbjct: 61  KKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEITLLPDKIRVASGRRAVAMATGVID 120

Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
           R Y+ G P KQV+VVVTSGWSV+CFDHNL KLWE NLQEDFP NA HREIAISISNYTLK
Sbjct: 121 RYYKNGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNARHREIAISISNYTLK 180

Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
           HGDTGLVIVGGRMEMQP+  MDPFEE+G+  +NA+QHRRSA+E +ASE+SG ++LRHF+ 
Sbjct: 181 HGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNADQHRRSATENQASEDSGAINLRHFSV 240

Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEV---EFRESVL 297
           YAFAG++GLLRWS+K +++EA  +DASQLIPQHNYKLDVHALNSRHPGE    EFRES+L
Sbjct: 241 YAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 300

Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVG-KSTSYPFHKPEEHHPPGKDSTKKISN 356
            VMPH WDRREDTLLKL+HFRRHKRK LKK  G KST+YPFHKPEEH P GKD ++KI  
Sbjct: 301 SVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPK 360

Query: 357 LIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLH 416
           LIGKAA YAGSAK KK + YIPTITNYT+LWWVPNVVVAHQKEGIEA+HL +GRT+CKL 
Sbjct: 361 LIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLS 420

Query: 417 LQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNAS 476
           L EGGLHADINGDGVLDHVQ VGGN  E+TVVSGSMEVL+PCWAVATSGVP+REQLFN S
Sbjct: 421 LLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVS 480

Query: 477 ICHHSPFNLFPH-GEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRG 535
           ICHHSPFN   + G++SR+F +  D ++LE+ATPILIPR DGH+HRKGSHGDV+FLTNRG
Sbjct: 481 ICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRKGSHGDVIFLTNRG 540

Query: 536 EVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL 595
           EVT+Y+P +HGHDA+WQWQL T+ATWSNLPSPSG+TE+ TVVPTLK FSLR+HDNQ MIL
Sbjct: 541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMIL 600

Query: 596 AGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQP 655
           AGGDQ AV+ISPGGSIL SI+LP+ PTHAL+ +DFSNDGLTDVI+MTSNGVYGFVQTRQP
Sbjct: 601 AGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQP 660

Query: 656 GALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASSGL 693
           GALFFS+LVGCL+VVM VIFVTQHLNS++ KPR SS  
Sbjct: 661 GALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSSSF 698

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	694
TAIR|locus:2080988	698	AT3G51050 "AT3G51050" [Arabido	0.995	0.989	0.797	6.99999999925e-315
DICTYBASE|DDB_G0275747	799	DDB_G0275747 "FG-GAP repeat-co	0.540	0.469	0.304	2e-59

TAIR|locus:2080988 AT3G51050 "AT3G51050" [Arabidopsis thaliana (taxid:3702)]

 Score = 3020 (1068.2 bits), Expect = 7.0e-315, P = 7.0e-315
 Identities = 555/696 (79%), Positives = 630/696 (90%)

Query:     1 MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
             MRKRDLAILMLS FAIFF+LQHEGDF+F+EAWFHL +EYP+K++ADRLPPPIVADLNGDG
Sbjct:     1 MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDG 60

Query:    61 RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
             +KEVLVAT+DAKIQVLEPH+RRVDEGFSEARVLAE++LLPDKIR+ASGRRAVAMATGVID
Sbjct:    61 KKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEITLLPDKIRVASGRRAVAMATGVID 120

Query:   121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
             R Y+ G P KQV+VVVTSGWSV+CFDHNL KLWE NLQEDFP NAHHREIAISISNYTLK
Sbjct:   121 RYYKNGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLK 180

Query:   181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
             HGDTGLVIVGGRMEMQP+  MDPFEE+G+  +NA+QHRRSA+E +ASE+SG ++LRHF+ 
Sbjct:   181 HGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNADQHRRSATENQASEDSGAINLRHFSV 240

Query:   241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
             YAFAG++GLLRWS+K +++EA  +DASQLIPQHNYKLDVHALNSRHPGE E   FRES+L
Sbjct:   241 YAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 300

Query:   298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVG-KSTSYPFHKPEEHHPPGKDSTKKISN 356
              VMPH WDRREDTLLKL+HFRRHKRK LKK  G KST+YPFHKPEEH P GKD ++KI  
Sbjct:   301 SVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPK 360

Query:   357 LIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLH 416
             LIGKAA YAGSAK KK + YIPTITNYT+LWWVPNVVVAHQKEGIEA+HL +GRT+CKL 
Sbjct:   361 LIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLS 420

Query:   417 LQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNAS 476
             L EGGLHADINGDGVLDHVQ VGGN  E+TVVSGSMEVL+PCWAVATSGVP+REQLFN S
Sbjct:   421 LLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVS 480

Query:   477 ICHHSPFNLFPHG-EFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRG 535
             ICHHSPFN   +G ++SR+F +  D ++LE+ATPILIPR DGH+HRKGSHGDV+FLTNRG
Sbjct:   481 ICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRKGSHGDVIFLTNRG 540

Query:   536 EVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL 595
             EVT+Y+P +HGHDA+WQWQL T+ATWSNLPSPSG+TE+ TVVPTLK FSLR+HDNQ MIL
Sbjct:   541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMIL 600

Query:   596 AGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQP 655
             AGGDQ AV+ISPGGSIL SI+LP+ PTHAL+ +DFSNDGLTDVI+MTSNGVYGFVQTRQP
Sbjct:   601 AGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQP 660

Query:   656 GALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASS 691
             GALFFS+LVGCL+VVM VIFVTQHLNS++ KPR SS
Sbjct:   661 GALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSS 696

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0007160 "cell-matrix adhesion" evidence=ISS

GO:0008305 "integrin complex" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0275747 DDB_G0275747 "FG-GAP repeat-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 449 (163.1 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
 Identities = 132/433 (30%), Positives = 212/433 (48%)

Query:    89 EARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHN 148
             E  VL E SLL D + +A+GRR +A+ TG    +   G+  +Q++VVVT GW+V+CFD+ 
Sbjct:   116 ELPVLYESSLLSD-VGLATGRRPIAIKTGYAKHSI-PGERRQQIIVVVTDGWAVLCFDNK 173

Query:   149 LNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIG 208
             L KLWE+   ++  P  +  EI+I+I   T+   D G+VI+GGRME  P  I  P   I 
Sbjct:   174 LKKLWESYASDEVLPGHYQSEISITILPTTIPD-DKGIVIIGGRMEPLPGVIHKPHYSIP 232

Query:   209 LAEKNAEQHRRSASEKEASENSGTV--DLRHFAFYAFAGRSGLLRWSRKNENIEAQ-P-- 263
             +  +  E  +    +++   +S T   +  HF+++++  + G  RWS +  + + + P  
Sbjct:   233 MFGEKVETDKDHDHKRDDDHDSFTAHREENHFSYFSYDCKDGYKRWSHEENDFKPENPHT 292

Query:   264 TDASQL---IPQHNYKLDVHALNSRHPGEVE---FRESVLGVMPHHWDRREDTLLKLSHF 317
             T+  +    I  H++K  + +    H GEV+   +R+S+L  +PH W    DT L+  HF
Sbjct:   293 TEEHKKDSDISLHSFKQHIFS-QLEHLGEVDWKTYRDSILASLPHKWSSNFDTKLEPRHF 351

Query:   318 RRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPVNY- 376
                ++KI    +  +T+              D T  I+ LIG + T           N+ 
Sbjct:   352 ---EKKI--NTIRGTTN-------------NDGTNVINGLIGSSNTLNNEMIEFYSKNFD 393

Query:   377 -IPTITNYTQLWWV------PNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHAD---- 425
                 ++   Q+ +       PNV+V H K GIE +H+ SG+T+CKL L     + D    
Sbjct:   394 TFSILSKKDQISFKSQHIENPNVIVTHHKYGIEVIHIVSGKTLCKLVLDGTDFYTDSNRY 453

Query:   426 -----INGDGVLDHVQAVGGNGAEQTV--------VSGSMEVLRPCWAVATSGVPVREQL 472
                  +NGDGVLD V++  GN     +        +         C  +A SG+P +E L
Sbjct:   454 IVYLDLNGDGVLDQVRSYAGNFKNSQLGRNKKNKNIGDDNNEDSYCVGLALSGLPPKETL 513

Query:   473 FNASICHHSPFNL 485
             F+  IC    FN+
Sbjct:   514 FDLKICGGQIFNM 526

GO:0031153 "slug development involved in sorocarp development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00570132 hypothetical protein (693 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	694
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	97.35
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.91
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.66
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.43
PF01839	34	FG-GAP: FG-GAP repeat; InterPro: IPR013517 This re	94.75
PF01839	34	FG-GAP: FG-GAP repeat; InterPro: IPR013517 This re	94.74
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.4
PF13517	61	VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhi	90.56
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	90.44
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	90.28
PF14782	431	BBS2_C: Ciliary BBSome complex subunit 2, C-termin	90.16
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	90.11
PF13517	61	VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhi	89.43
PF14779	257	BBS1: Ciliary BBSome complex subunit 1	89.42
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	89.31
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	87.32
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	84.27
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	84.06
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	82.62
COG1520	370	FOG: WD40-like repeat [Function unknown]	80.19

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=97.35  E-value=0.14  Score=55.68  Aligned_cols=46  Identities=15%  Similarity=0.262  Sum_probs=32.6

Q ss_pred             cceEEEEcC-CCCEEEEEeCCC-CCCcccEEeecCCCCcccEEEecCCe-EEEEE
Q 005484          599 DQEAVVISP-GGSILTSIDLPA-PPTHALVCEDFSNDGLTDVILMTSNG-VYGFV  650 (694)
Q Consensus       599 e~~~~ils~-~G~vl~s~~Lp~-pP~ap~iv~DfngDG~nDiIVvT~~G-iygfv  650 (694)
                      +-.+.++|+ +|+++.+.+++. .-.+.|++.    ||  .|+|.|.+| +|.|.
T Consensus       344 ~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~----~~--~l~v~t~~G~l~~~~  392 (394)
T PRK11138        344 EGYLHWINREDGRFVAQQKVDSSGFLSEPVVA----DD--KLLIQARDGTVYAIT  392 (394)
T ss_pred             CCEEEEEECCCCCEEEEEEcCCCcceeCCEEE----CC--EEEEEeCCceEEEEe
Confidence            445677886 999999999863 344455553    22  599999998 78764

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.91  E-value=0.25  Score=53.12  Aligned_cols=94  Identities=15%  Similarity=0.207  Sum_probs=60.0

Q ss_pred             ccEEEEecCceEEEecCCCCCCcceeeeeeecccccccCCCCCCCCccceeeeeeEEeecccCCccceEEEe-ecceEEE
Q 005484          526 GDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAG-GDQEAVV  604 (694)
Q Consensus       526 ~D~vFL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~-Ge~~~~i  604 (694)
                      +.+++.+++|.|.|++..    ++..+|+...   +.      +  . ...-|.+.         ...|++. -+-.+.+
T Consensus       280 ~~vyv~~~~G~l~~~d~~----tG~~~W~~~~---~~------~--~-~~ssp~i~---------g~~l~~~~~~G~l~~  334 (377)
T TIGR03300       280 NRLYVTDADGVVVALDRR----SGSELWKNDE---LK------Y--R-QLTAPAVV---------GGYLVVGDFEGYLHW  334 (377)
T ss_pred             CEEEEECCCCeEEEEECC----CCcEEEcccc---cc------C--C-ccccCEEE---------CCEEEEEeCCCEEEE
Confidence            346667789999999974    3378888521   00      0  0 01112211         1233333 3445777


Q ss_pred             EcC-CCCEEEEEeCCCC-CCcccEEeecCCCCcccEEEecCCe-EEEEE
Q 005484          605 ISP-GGSILTSIDLPAP-PTHALVCEDFSNDGLTDVILMTSNG-VYGFV  650 (694)
Q Consensus       605 ls~-~G~vl~s~~Lp~p-P~ap~iv~DfngDG~nDiIVvT~~G-iygfv  650 (694)
                      +|+ +|+++.+.+++.. -.+.|++.|      +-|+|.|.+| +|+|.
T Consensus       335 ~d~~tG~~~~~~~~~~~~~~~sp~~~~------~~l~v~~~dG~l~~~~  377 (377)
T TIGR03300       335 LSREDGSFVARLKTDGSGIASPPVVVG------DGLLVQTRDGDLYAFR  377 (377)
T ss_pred             EECCCCCEEEEEEcCCCccccCCEEEC------CEEEEEeCCceEEEeC
Confidence            886 8999999999884 466667666      3499999999 88873

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.66  E-value=0.0045  Score=57.78  Aligned_cols=35  Identities=37%  Similarity=0.587  Sum_probs=29.0

Q ss_pred             eEEccCCCCceeEEEecCCceEEEecccccCccCCccccc
Q 005484           52 IVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEAR   91 (694)
Q Consensus        52 IvtDLnGDG~~evivat~d~ki~v~~p~~~~~~~gf~~~~   91 (694)
                      .++|.||||++||||+|.|.+|+|++     .++-..+.+
T Consensus         6 ~~~d~d~dg~~eLlvGs~D~~IRvf~-----~~e~~~Ei~   40 (111)
T PF14783_consen    6 CLFDFDGDGENELLVGSDDFEIRVFK-----GDEIVAEIT   40 (111)
T ss_pred             EEEecCCCCcceEEEecCCcEEEEEe-----CCcEEEEEe
Confidence            47899999999999999999999999     555443333

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.43  E-value=0.16  Score=55.34  Aligned_cols=29  Identities=24%  Similarity=0.167  Sum_probs=22.5

Q ss_pred             cCcEEEEecccceeEEEccCCCeeEEEec
Q 005484          389 VPNVVVAHQKEGIEAVHLASGRTVCKLHL  417 (694)
Q Consensus       389 ~PNViV~H~~~GIEViHL~SGrtlckl~L  417 (694)
                      .-.|++......+-++.+.||+.+-+..+
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~  284 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKREY  284 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeecC
Confidence            44566777777899999999998877654

>PF01839 FG-GAP: FG-GAP repeat; InterPro: IPR013517 This region contains the extracellular repeat that is found in up to seven copies in alpha integrins

Probab=94.75  E-value=0.033  Score=41.58  Aligned_cols=26  Identities=31%  Similarity=0.517  Sum_probs=18.8

Q ss_pred             CeEEccCCCCceeEEEe----cCCceEEEe
Q 005484           51 PIVADLNGDGRKEVLVA----THDAKIQVL   76 (694)
Q Consensus        51 PIvtDLnGDG~~eviva----t~d~ki~v~   76 (694)
                      .-+.|+||||+.||++.    +..+++.||
T Consensus         5 ~~~gD~ngDG~~Dl~vg~~~~~~~G~v~v~   34 (34)
T PF01839_consen    5 VAVGDFNGDGYDDLAVGYNNGGNAGAVYVY   34 (34)
T ss_dssp             EEEESTSSSSS-EEEEETTTTCTCBEEEEE
T ss_pred             cEEEEcCCCCCccEEEEcCCCCcCCEEEEC
Confidence            34789999999999995    444666554

This repeat has been predicted to fold into a beta propeller structure []. The repeat is called the FG-GAP repeat after two conserved motifs in the repeat []. The FG-GAP repeats are found in the N terminus of integrin alpha chains, a region that has been shown to be important for ligand binding []. A putative Ca2+ binding motif is found in some of the repeats. ; PDB: 1L5G_A 3IJE_A 1M1X_A 1JV2_A 1U8C_A 3V4P_C 3V4V_C 3VI3_A 3VI4_C 2VDN_A ....

>PF01839 FG-GAP: FG-GAP repeat; InterPro: IPR013517 This region contains the extracellular repeat that is found in up to seven copies in alpha integrins

Probab=94.74  E-value=0.031  Score=41.75  Aligned_cols=25  Identities=32%  Similarity=0.647  Sum_probs=17.9

Q ss_pred             cEEeecCCCCcccEEE----ecCCe-EEEE
Q 005484          625 LVCEDFSNDGLTDVIL----MTSNG-VYGF  649 (694)
Q Consensus       625 ~iv~DfngDG~nDiIV----vT~~G-iygf  649 (694)
                      +-+.||||||..||+|    .+..| +|.|
T Consensus         5 ~~~gD~ngDG~~Dl~vg~~~~~~~G~v~v~   34 (34)
T PF01839_consen    5 VAVGDFNGDGYDDLAVGYNNGGNAGAVYVY   34 (34)
T ss_dssp             EEEESTSSSSS-EEEEETTTTCTCBEEEEE
T ss_pred             cEEEEcCCCCCccEEEEcCCCCcCCEEEEC
Confidence            5578999999999999    45554 5544

This repeat has been predicted to fold into a beta propeller structure []. The repeat is called the FG-GAP repeat after two conserved motifs in the repeat []. The FG-GAP repeats are found in the N terminus of integrin alpha chains, a region that has been shown to be important for ligand binding []. A putative Ca2+ binding motif is found in some of the repeats. ; PDB: 1L5G_A 3IJE_A 1M1X_A 1JV2_A 1U8C_A 3V4P_C 3V4V_C 3VI3_A 3VI4_C 2VDN_A ....

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.40  E-value=0.33  Score=47.03  Aligned_cols=108  Identities=24%  Similarity=0.356  Sum_probs=70.8

Q ss_pred             eeEEEecCCceEEEecccccCccCCccccccceeeecccccccccCCCceEEEecceeccccccCCCceEEEEEEecCeE
Q 005484           62 KEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWS  141 (694)
Q Consensus        62 ~evivat~d~ki~v~~p~~~~~~~gf~~~~~~~e~Sll~~~~~~~~grrpVAlaaG~~~~~~~~~~~~kqVIvVVtsdw~  141 (694)
                      +-|..||..+||-|.+||.+....+-    .-.++++|-      -++.+.||+||.+++      ..++=+.+|-+.=+
T Consensus        11 pcL~~aT~~gKV~IH~ph~~~~~~~~----~~~~i~~LN------in~~italaaG~l~~------~~~~D~LliGt~t~   74 (136)
T PF14781_consen   11 PCLACATTGGKVFIHNPHERGQRTGR----QDSDISFLN------INQEITALAAGRLKP------DDGRDCLLIGTQTS   74 (136)
T ss_pred             eeEEEEecCCEEEEECCCcccccccc----ccCceeEEE------CCCceEEEEEEecCC------CCCcCEEEEeccce
Confidence            47899999999999999987332221    123344432      267999999999998      23344556677889


Q ss_pred             EEEec--CCchhHhhhcccccCCCCCcceeEEEEEeeceeccCCceEEEEeeeeccc
Q 005484          142 VMCFD--HNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQ  196 (694)
Q Consensus       142 V~Cfd--hnLk~lWe~~l~~~~p~~~~~~EvsIsIs~~~ik~~D~G~VIVGgr~e~~  196 (694)
                      |+|||  .|-..     .+.++|.+..-    |.+-  ++...+.=++||||.-..+
T Consensus        75 llaYDV~~N~d~-----Fyke~~DGvn~----i~~g--~~~~~~~~l~ivGGncsi~  120 (136)
T PF14781_consen   75 LLAYDVENNSDL-----FYKEVPDGVNA----IVIG--KLGDIPSPLVIVGGNCSIQ  120 (136)
T ss_pred             EEEEEcccCchh-----hhhhCccceeE----EEEE--ecCCCCCcEEEECceEEEE
Confidence            99994  34333     33456665322    2222  5555678899999987554

>PF13517 VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella; PDB: 2C25_A 2BWR_B 2C4D_A 2BWM_A

Probab=90.56  E-value=0.23  Score=40.14  Aligned_cols=22  Identities=45%  Similarity=0.813  Sum_probs=17.3

Q ss_pred             ccCCCCceeEEEecCCceEEEec
Q 005484           55 DLNGDGRKEVLVATHDAKIQVLE   77 (694)
Q Consensus        55 DLnGDG~~evivat~d~ki~v~~   77 (694)
                      |+||||++||+++. ++++.++.
T Consensus         1 D~ngDG~~Div~~~-~~~~~~~~   22 (61)
T PF13517_consen    1 DFNGDGRPDIVVAN-DGSVYVYL   22 (61)
T ss_dssp             -SSSSSS-EEEEE--SSSEEEEE
T ss_pred             CCCCCCCccEEEEe-CCCeEEEE
Confidence            89999999999998 67888887

>PF01011 PQQ: PQQ enzyme repeat family

Probab=90.44  E-value=0.19  Score=37.64  Aligned_cols=22  Identities=18%  Similarity=0.366  Sum_probs=19.3

Q ss_pred             eEEEeecCCCCceeccccCCCc
Q 005484          238 FAFYAFAGRSGLLRWSRKNENI  259 (694)
Q Consensus       238 fsyyAf~g~tG~~RW~h~~~df  259 (694)
                      -..||||.+||++.|+++.+..
T Consensus        10 g~l~AlD~~TG~~~W~~~~~~~   31 (38)
T PF01011_consen   10 GYLYALDAKTGKVLWKFQTGPP   31 (38)
T ss_dssp             SEEEEEETTTTSEEEEEESSSG
T ss_pred             CEEEEEECCCCCEEEeeeCCCC
Confidence            3689999999999999998853

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=90.28  E-value=1.7  Score=46.69  Aligned_cols=92  Identities=17%  Similarity=0.219  Sum_probs=60.8

Q ss_pred             EEEEecCceEEEecCCCCCCcceeeeeeecccccccCCCCCCCCccceeeeeeEEeecccCCccceEEEeecceEEEEcC
Q 005484          528 VVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISP  607 (694)
Q Consensus       528 ~vFL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils~  607 (694)
                      +++...+|.|.|++..    +|...|+.+++......             |.+        +...++++..+..+.-+|.
T Consensus        68 v~v~~~~g~v~a~d~~----tG~~~W~~~~~~~~~~~-------------p~v--------~~~~v~v~~~~g~l~ald~  122 (377)
T TIGR03300        68 VYAADADGTVVALDAE----TGKRLWRVDLDERLSGG-------------VGA--------DGGLVFVGTEKGEVIALDA  122 (377)
T ss_pred             EEEECCCCeEEEEEcc----CCcEeeeecCCCCcccc-------------eEE--------cCCEEEEEcCCCEEEEEEC
Confidence            4455566999999953    34899998777533211             111        1223444455667788886


Q ss_pred             -CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEEE
Q 005484          608 -GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGFV  650 (694)
Q Consensus       608 -~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~~G-iygfv  650 (694)
                       +|+++-+..++.++.++|++.|    +  -+++.+.+| +|+|-
T Consensus       123 ~tG~~~W~~~~~~~~~~~p~v~~----~--~v~v~~~~g~l~a~d  161 (377)
T TIGR03300       123 EDGKELWRAKLSSEVLSPPLVAN----G--LVVVRTNDGRLTALD  161 (377)
T ss_pred             CCCcEeeeeccCceeecCCEEEC----C--EEEEECCCCeEEEEE
Confidence             9999999999988888888742    2  266667676 77774

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF14782 BBS2_C: Ciliary BBSome complex subunit 2, C-terminal

Probab=90.16  E-value=0.32  Score=55.08  Aligned_cols=42  Identities=26%  Similarity=0.543  Sum_probs=38.9

Q ss_pred             CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEEE
Q 005484          608 GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGFV  650 (694)
Q Consensus       608 ~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~~G-iygfv  650 (694)
                      +|.++-...|.+ |+|.++.+|+-+||.+++|++|.|| |-||.
T Consensus         1 tGeVlfKd~~~s-~VA~vv~~DYR~dG~~~lI~csvdGeVrGy~   43 (431)
T PF14782_consen    1 TGEVLFKDTFSS-PVAGVVVADYRMDGKPQLICCSVDGEVRGYL   43 (431)
T ss_pred             CceEEEEecccc-hhheeeeeccccCCCceEEEEEcCCEEEEec
Confidence            588898888988 8999999999999999999999999 99993

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=90.11  E-value=16  Score=42.46  Aligned_cols=58  Identities=22%  Similarity=0.365  Sum_probs=43.2

Q ss_pred             eEEEEcC-CCCEEEEEeCCC------CCCcccEEeecCCCCc-ccEE-EecCCeEEEEEEeecCCchh
Q 005484          601 EAVVISP-GGSILTSIDLPA------PPTHALVCEDFSNDGL-TDVI-LMTSNGVYGFVQTRQPGALF  659 (694)
Q Consensus       601 ~~~ils~-~G~vl~s~~Lp~------pP~ap~iv~DfngDG~-nDiI-VvT~~Giygfv~~~~~g~~~  659 (694)
                      +++-||. +|++.=.++.-.      =..++|++.|++.||. -+++ +.|++| +-|++-|.+|-.+
T Consensus       272 s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G-~~~vlDr~tG~~i  338 (527)
T TIGR03075       272 SIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNG-FFYVLDRTNGKLL  338 (527)
T ss_pred             eEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCc-eEEEEECCCCcee
Confidence            6777786 899988877733      3567888889877775 3555 777788 5699999999654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF13517 VCBS: Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella; PDB: 2C25_A 2BWR_B 2C4D_A 2BWM_A

Probab=89.43  E-value=0.31  Score=39.32  Aligned_cols=25  Identities=28%  Similarity=0.674  Sum_probs=18.6

Q ss_pred             ecCCCCcccEEEecCCeEEEEEEee
Q 005484          629 DFSNDGLTDVILMTSNGVYGFVQTR  653 (694)
Q Consensus       629 DfngDG~nDiIVvT~~Giygfv~~~  653 (694)
                      ||||||..||++.+...++-|.+..
T Consensus         1 D~ngDG~~Div~~~~~~~~~~~~~~   25 (61)
T PF13517_consen    1 DFNGDGRPDIVVANDGSVYVYLNDG   25 (61)
T ss_dssp             -SSSSSS-EEEEE-SSSEEEEEB-S
T ss_pred             CCCCCCCccEEEEeCCCeEEEEECC
Confidence            8999999999999977788887764

>PF14779 BBS1: Ciliary BBSome complex subunit 1

Probab=89.42  E-value=0.68  Score=49.23  Aligned_cols=76  Identities=30%  Similarity=0.574  Sum_probs=56.3

Q ss_pred             EEccCCCCceeEEEec-----CCceEEEecccccCccCCccccccceeeecccccccccCCCceEEEecceeccccccCC
Q 005484           53 VADLNGDGRKEVLVAT-----HDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQ  127 (694)
Q Consensus        53 vtDLnGDG~~evivat-----~d~ki~v~~p~~~~~~~gf~~~~~~~e~Sll~~~~~~~~grrpVAlaaG~~~~~~~~~~  127 (694)
                      +.||+|||-+=||+|.     .+.||.||.      .     ..+..|..| ||        -|+||++=|.+.    .+
T Consensus        22 l~Dl~gDGd~kLvvaD~g~~~~~~kLKVyk------G-----t~l~~E~~L-~d--------~P~ai~sFy~d~----~e   77 (257)
T PF14779_consen   22 LADLQGDGDYKLVVADLGTGDQNMKLKVYK------G-----TSLISEITL-PD--------LPSAIVSFYMDE----HE   77 (257)
T ss_pred             eeecCCCCeEEEEEEecCCcCCCceEEEEc------C-----CChhhcccc-cC--------CCeEEEEEeccC----CC
Confidence            5799999999999999     457999998      1     334567777 66        799999999887    35


Q ss_pred             CceEEEEEEecCeEEEEecCCchhHhh
Q 005484          128 PLKQVLVVVTSGWSVMCFDHNLNKLWE  154 (694)
Q Consensus       128 ~~kqVIvVVtsdw~V~CfdhnLk~lWe  154 (694)
                      ++..+|+ |-++=.|+-| .|||+..+
T Consensus        78 p~~P~iA-VA~G~~vyiY-kNlkP~yK  102 (257)
T PF14779_consen   78 PRTPAIA-VAAGPSVYIY-KNLKPFYK  102 (257)
T ss_pred             CCCCeEE-EEeCCEEEEE-ecccceee
Confidence            6666555 5566777777 34555443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=89.31  E-value=34  Score=38.07  Aligned_cols=201  Identities=14%  Similarity=0.202  Sum_probs=118.3

Q ss_pred             ccceeEEEccCCCeeEEEecCCC-------------------Cee-eeccCCCceeEEEeeccCCceeeeecCCcccCcC
Q 005484          398 KEGIEAVHLASGRTVCKLHLQEG-------------------GLH-ADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRP  457 (694)
Q Consensus       398 ~~GIEViHL~SGrtlckl~L~~~-------------------~l~-aDINgDGvlD~V~~~gg~~~e~~~~~g~~~~~~~  457 (694)
                      ..-|+|+.++|++++-++.+++.                   -+| ++++.|..|--|-+..+.-..+.       ..++
T Consensus        76 ~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei-------~vp~  148 (352)
T TIGR02658        76 TDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMM-------DVPD  148 (352)
T ss_pred             CCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEE-------eCCC
Confidence            46799999999999998887332                   244 46666666655554433333222       2377


Q ss_pred             eEEEEeecCCccccceeccccCCCCCCcccCCccccCcCCCCCCCccccccceEE--------eCCCCCCCCccccccEE
Q 005484          458 CWAVATSGVPVREQLFNASICHHSPFNLFPHGEFSRNFGRTSDVASLEVATPILI--------PRSDGHRHRKGSHGDVV  529 (694)
Q Consensus       458 C~a~atSGvP~re~LFn~siC~~~~f~~f~~~~~~~~~~~~~d~~~levv~Pl~i--------~~~~g~~~r~~~~~D~v  529 (694)
                      |+.+-.+    .|.=|- .+|....+.....++         + +...+.+..++        .++  .-  ....+-.+
T Consensus       149 ~~~vy~t----~e~~~~-~~~~Dg~~~~v~~d~---------~-g~~~~~~~~vf~~~~~~v~~rP--~~--~~~dg~~~  209 (352)
T TIGR02658       149 CYHIFPT----ANDTFF-MHCRDGSLAKVGYGT---------K-GNPKIKPTEVFHPEDEYLINHP--AY--SNKSGRLV  209 (352)
T ss_pred             CcEEEEe----cCCccE-EEeecCceEEEEecC---------C-CceEEeeeeeecCCccccccCC--ce--EcCCCcEE
Confidence            9888665    355555 788765542221110         0 11111111111        111  00  01124678


Q ss_pred             EEecCceEEEecCCCCCCcceeeeeeeccc----ccccCCCCCCCCccceeeeeeEEeecccCCccceEEE---------
Q 005484          530 FLTNRGEVTAYSPGLHGHDAIWQWQLLTDA----TWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA---------  596 (694)
Q Consensus       530 FL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a----~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA---------  596 (694)
                      |.++.|.|+-++.++.+-.....|.+.+.+    .|...    |          .+++.+.+.+..=|+++         
T Consensus       210 ~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~----g----------~q~ia~~~dg~~lyV~~~~~~~~thk  275 (352)
T TIGR02658       210 WPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPG----G----------WQQVAYHRARDRIYLLADQRAKWTHK  275 (352)
T ss_pred             EEecCCeEEEEecCCCcceecceeeeccccccccccCCC----c----------ceeEEEcCCCCEEEEEecCCcccccc
Confidence            999999999999766544445667765543    45442    1          12355555666666665         


Q ss_pred             eecceEEEEcC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEec
Q 005484          597 GGDQEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMT  642 (694)
Q Consensus       597 ~Ge~~~~ils~-~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT  642 (694)
                      .|..++.++|. ++++++.+++...|    --.-|+.||..=+.+..
T Consensus       276 ~~~~~V~ViD~~t~kvi~~i~vG~~~----~~iavS~Dgkp~lyvtn  318 (352)
T TIGR02658       276 TASRFLFVVDAKTGKRLRKIELGHEI----DSINVSQDAKPLLYALS  318 (352)
T ss_pred             CCCCEEEEEECCCCeEEEEEeCCCce----eeEEECCCCCeEEEEeC
Confidence            45579999996 99999999997643    33347777765555444

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=87.32  E-value=6  Score=38.94  Aligned_cols=88  Identities=24%  Similarity=0.391  Sum_probs=57.1

Q ss_pred             cCceEEEecC-CCCCCcceeeeeeecccccccCCCCCCCCccceeeeeeEEeecccCCccceEEEeecceEEEEcC-CCC
Q 005484          533 NRGEVTAYSP-GLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISP-GGS  610 (694)
Q Consensus       533 s~G~VTs~~~-~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils~-~G~  610 (694)
                      +.|.|+|+++ .|     ...|+...+..+..          ....|.        ....-++++.++..+..+|. +|+
T Consensus         1 ~~g~l~~~d~~tG-----~~~W~~~~~~~~~~----------~~~~~~--------~~~~~v~~~~~~~~l~~~d~~tG~   57 (238)
T PF13360_consen    1 DDGTLSALDPRTG-----KELWSYDLGPGIGG----------PVATAV--------PDGGRVYVASGDGNLYALDAKTGK   57 (238)
T ss_dssp             -TSEEEEEETTTT-----EEEEEEECSSSCSS----------EEETEE--------EETTEEEEEETTSEEEEEETTTSE
T ss_pred             CCCEEEEEECCCC-----CEEEEEECCCCCCC----------ccceEE--------EeCCEEEEEcCCCEEEEEECCCCC
Confidence            4689999998 44     89999865432100          000011        12233455569999999996 999


Q ss_pred             EEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe-EEEE
Q 005484          611 ILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG-VYGF  649 (694)
Q Consensus       611 vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~~G-iygf  649 (694)
                      ++-+.+++.+...+|.+.+      +.|+|.+.+| +|+|
T Consensus        58 ~~W~~~~~~~~~~~~~~~~------~~v~v~~~~~~l~~~   91 (238)
T PF13360_consen   58 VLWRFDLPGPISGAPVVDG------GRVYVGTSDGSLYAL   91 (238)
T ss_dssp             EEEEEECSSCGGSGEEEET------TEEEEEETTSEEEEE
T ss_pred             EEEEeeccccccceeeecc------cccccccceeeeEec
Confidence            9999999988777764432      3456676665 6655

...

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=84.27  E-value=9  Score=44.42  Aligned_cols=37  Identities=30%  Similarity=0.391  Sum_probs=30.7

Q ss_pred             cccccCCCCeEEccCCCCc--eeEEEecCCceEEEeccc
Q 005484           43 FDADRLPPPIVADLNGDGR--KEVLVATHDAKIQVLEPH   79 (694)
Q Consensus        43 ~~~e~lP~PIvtDLnGDG~--~evivat~d~ki~v~~p~   79 (694)
                      ++-+..-.|+++|++.||+  +-|+.++.++.+-++++.
T Consensus       295 wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~  333 (527)
T TIGR03075       295 WDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRT  333 (527)
T ss_pred             ccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECC
Confidence            3455667899999988887  788899999999999954

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=84.06  E-value=7.3  Score=44.38  Aligned_cols=88  Identities=14%  Similarity=0.106  Sum_probs=55.4

Q ss_pred             ccEEEEecCceEEEecCCCCCCcceeeeeeecccccccCCCCCCCCccceeeeeeEEeecccCCccceEEEeecceEEEE
Q 005484          526 GDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVI  605 (694)
Q Consensus       526 ~D~vFL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~il  605 (694)
                      +.++|.+.+|.|.|++..    .|+.+|+.++.......            .|.+..-+.-..+...++++..+..+.-+
T Consensus        62 g~vy~~~~~g~l~AlD~~----tG~~~W~~~~~~~~~~~------------~~~~~~~g~~~~~~~~V~v~~~~g~v~Al  125 (488)
T cd00216          62 GDMYFTTSHSALFALDAA----TGKVLWRYDPKLPADRG------------CCDVVNRGVAYWDPRKVFFGTFDGRLVAL  125 (488)
T ss_pred             CEEEEeCCCCcEEEEECC----CChhhceeCCCCCcccc------------ccccccCCcEEccCCeEEEecCCCeEEEE
Confidence            345566668999999963    34899998876541110            00000000101112456666677778888


Q ss_pred             cC-CCCEEEEEeCCCC------CCcccEEee
Q 005484          606 SP-GGSILTSIDLPAP------PTHALVCED  629 (694)
Q Consensus       606 s~-~G~vl~s~~Lp~p------P~ap~iv~D  629 (694)
                      |. +|+++-.++++.+      ..++|++.|
T Consensus       126 D~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~  156 (488)
T cd00216         126 DAETGKQVWKFGNNDQVPPGYTMTGAPTIVK  156 (488)
T ss_pred             ECCCCCEeeeecCCCCcCcceEecCCCEEEC
Confidence            96 9999999999876      567777775

The alignment model contains an 8-bladed beta-propeller.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=82.62  E-value=1.7  Score=49.31  Aligned_cols=91  Identities=12%  Similarity=0.133  Sum_probs=54.2

Q ss_pred             cCceEEEecCCCCCCcceeeeeeecc---cccccCCCCCCCCccceeeeeeEEeecccCCccceEEEeecceEEEEcC-C
Q 005484          533 NRGEVTAYSPGLHGHDAIWQWQLLTD---ATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISP-G  608 (694)
Q Consensus       533 s~G~VTs~~~~~~g~~~~~~Wq~~T~---a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils~-~  608 (694)
                      .+|.|+|++..    +|+.+|+...+   ..|...       . ...-.++.    -.+  .-+.+...+..+.-+|. +
T Consensus       364 ~~G~l~AlD~~----tG~~~W~~~~~~~~~~~~~g-------~-~~~~~~~~----~~g--~~v~~g~~dG~l~ald~~t  425 (488)
T cd00216         364 GKGGLAALDPK----TGKVVWEKREGTIRDSWNIG-------F-PHWGGSLA----TAG--NLVFAGAADGYFRAFDATT  425 (488)
T ss_pred             CceEEEEEeCC----CCcEeeEeeCCccccccccC-------C-cccCcceE----ecC--CeEEEECCCCeEEEEECCC
Confidence            57889999863    44899998766   223210       0 00001111    011  12333345567777885 9


Q ss_pred             CCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe
Q 005484          609 GSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG  645 (694)
Q Consensus       609 G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~~G  645 (694)
                      |+++-+.+|+++-.++|++-.-+|    .+.|.|.+|
T Consensus       426 G~~lW~~~~~~~~~a~P~~~~~~g----~~yv~~~~g  458 (488)
T cd00216         426 GKELWKFRTPSGIQATPMTYEVNG----KQYVGVMVG  458 (488)
T ss_pred             CceeeEEECCCCceEcCEEEEeCC----EEEEEEEec
Confidence            999999999999999998654443    455555554

The alignment model contains an 8-bladed beta-propeller.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=80.19  E-value=2.9  Score=45.38  Aligned_cols=70  Identities=23%  Similarity=0.347  Sum_probs=49.0

Q ss_pred             EEEEecCeEEEEecCCchh-HhhhcccccCCCCCcceeEEEEEeeceeccCCceEEEEeeeecccCCCCCChhhhhhhhh
Q 005484          133 LVVVTSGWSVMCFDHNLNK-LWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIGLAE  211 (694)
Q Consensus       133 IvVVtsdw~V~CfdhnLk~-lWe~~l~~~~p~~~~~~EvsIsIs~~~ik~~D~G~VIVGgr~e~~~~~~~d~f~e~~~~~  211 (694)
                      |.|-+++..|.|||.+-.+ +|+..+...         ....-.|...   ..|.|.+|...                  
T Consensus        71 v~~~~~~G~i~A~d~~~g~~~W~~~~~~~---------~~~~~~~~~~---~~G~i~~g~~~------------------  120 (370)
T COG1520          71 VYVGTRDGNIFALNPDTGLVKWSYPLLGA---------VAQLSGPILG---SDGKIYVGSWD------------------  120 (370)
T ss_pred             EEEecCCCcEEEEeCCCCcEEecccCcCc---------ceeccCceEE---eCCeEEEeccc------------------
Confidence            4444788899999988866 899988860         0000111111   16778888333                  


Q ss_pred             hhhhhhhcchhhhhhcccCCCcccceeEEEeecCCCCceeccccCCC
Q 005484          212 KNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNEN  258 (694)
Q Consensus       212 ~~~e~hr~~~~~k~~~~~~g~~~~~HfsyyAf~g~tG~~RW~h~~~d  258 (694)
                                         |       .|||||..||++.|+++-.+
T Consensus       121 -------------------g-------~~y~ld~~~G~~~W~~~~~~  141 (370)
T COG1520         121 -------------------G-------KLYALDASTGTLVWSRNVGG  141 (370)
T ss_pred             -------------------c-------eEEEEECCCCcEEEEEecCC
Confidence                               2       89999999999999999876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	694
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 4e-04
 Identities = 55/398 (13%), Positives = 109/398 (27%), Gaps = 117/398 (29%)

Query: 4   RDLAILMLSAFAIFF-----------------SLQHEGDFSFREAWFHLSEEYPIKFDA- 45
               +     F IF+                  L ++ D ++     H S    ++  + 
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH-SSNIKLRIHSI 230

Query: 46  -DRL-------PPP---IVAD-------LNG-DGRKEVLVATHDAKI--QVLEPHARRV- 83
              L       P     +V          N  +   ++L+ T   ++   +       + 
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 84  ----DEGFSEARVLAEVSLLPDKIRIASG---RRAVA---MATGVIDRTYRQG----QPL 129
                   +   V    SLL   +        R  +        +I  + R G       
Sbjct: 291 LDHHSMTLTPDEVK---SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 130 KQVLVVVTSGWSV-MCFDHNLNKLWEANLQED------FPPNAHHREIAISISNYTLKHG 182
           K V         +    + +LN L  A  ++       FPP+AH   I   +        
Sbjct: 348 KHVNC-----DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH---IPTIL-------- 391

Query: 183 DTGLVIVGGRMEMQ-PHTIMDPFEEIGLAEKNAEQHRRS-----ASEKEASENSGTVDLR 236
              L ++   +       +++   +  L EK  ++   S        K   EN   +   
Sbjct: 392 ---LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 237 HFAFYAFAGRSGLLRWSRKNENIEAQPTDASQLIPQH-NYKLDVHALNSRHPGEV-EFRE 294
               Y        +  +  ++++     D  Q    H  +    H  N  HP  +  FR 
Sbjct: 449 IVDHYN-------IPKTFDSDDLIPPYLD--QYFYSHIGH----HLKNIEHPERMTLFRM 495

Query: 295 SVL------------GVMPHHWDRREDTLLKLSHFRRH 320
             L                +      +TL +L  ++ +
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	694
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.39
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	87.74
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	86.65
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	85.22

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.39  E-value=0.14  Score=25.68  Aligned_cols=84  Identities=15%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCEEEEECC-CCCEE
Q ss_conf             84599961898888642222230433322688889877666122124874214579653499830224999969-99877
Q 005484          534 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISP-GGSIL  612 (694)
Q Consensus       534 ~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils~-~G~il  612 (694)
                      .|.++|+|+.    .|...||..++..+.     +|    .     |.     ..+-. ...+..+..+--+|. +|++|
T Consensus       443 ~G~l~AiD~~----TG~~~W~~~~~~~~~-----~g----~-----l~-----Taggl-Vf~G~~dg~l~A~Da~tGe~l  498 (571)
T d2ad6a1         443 MGQIRAFDLT----TGKAKWTKWEKFAAW-----GG----T-----LY-----TKGGL-VWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             CEEEEEECTT----TCCEEEEEEESSCCC-----SB----C-----EE-----ETTTE-EEEECTTSEEEEEETTTCCEE
T ss_pred             CCCEEEECCC----CCCEEEECCCCCCCC-----CC----E-----EE-----ECCCE-EEEECCCCEEEEEECCCCCEE
T ss_conf             5617885367----784642767899987-----56----0-----59-----66997-999778996999999998687


Q ss_pred             EEEECCCCCCCCCEEEECCCCCCCCEEEECC
Q ss_conf             9974899997661785058998523999627
Q 005484          613 TSIDLPAPPTHALVCEDFSNDGLTDVILMTS  643 (694)
Q Consensus       613 ~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~  643 (694)
                      =+.+||.+..++||.=-.  ||.-=|.|++-
T Consensus       499 W~~~l~~~~~a~P~ty~~--dGkqYi~v~~g  527 (571)
T d2ad6a1         499 WNFKMPSGGIGSPMTYSF--KGKQYIGSMYG  527 (571)
T ss_dssp             EEEECSSCCCSCCEEEEE--TTEEEEEEEEC
T ss_pred             EEEECCCCCEECCEEEEE--CCEEEEEEEEC
T ss_conf             899899996515648988--99999999906

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=87.74  E-value=0.39  Score=22.96  Aligned_cols=82  Identities=18%  Similarity=0.211  Sum_probs=51.9

Q ss_pred             CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE-EECCEEEEECC-CCCE
Q ss_conf             845999618988886422222304333226888898776661221248742145796534998-30224999969-9987
Q 005484          534 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVISP-GGSI  611 (694)
Q Consensus       534 ~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils~-~G~i  611 (694)
                      .|.++++++.    .|+.+||...+..|.-              ++|+.    .   .-+|.+ ..+..+..+|. +|++
T Consensus       456 ~G~l~AiD~~----tGk~~W~~~~~~p~~g--------------g~lst----a---gglVF~G~~dg~l~A~Da~TGe~  510 (573)
T d1kb0a2         456 FGRLLAWDPV----AQKAAWSVEHVSPWNG--------------GTLTT----A---GNVVFQGTADGRLVAYHAATGEK  510 (573)
T ss_dssp             EEEEEEEETT----TTEEEEEEEESSSCCC--------------CEEEE----T---TTEEEEECTTSEEEEEETTTCCE
T ss_pred             CCCEEEECCC----CCCEEEEECCCCCCCC--------------CEEEE----C---CCEEEEECCCCEEEEEECCCCCE
T ss_conf             3617875787----7866705168898877--------------60798----6---99899977999199999998868


Q ss_pred             EEEEECCCCCCCCCEEEECCCCCCCCEEEEC
Q ss_conf             7997489999766178505899852399962
Q 005484          612 LTSIDLPAPPTHALVCEDFSNDGLTDVILMT  642 (694)
Q Consensus       612 l~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT  642 (694)
                      |=+..|++...++|+.=-.  ||.-=|+|..
T Consensus       511 LW~~~~~~~~~~~P~ty~~--~GkQYv~v~~  539 (573)
T d1kb0a2         511 LWEAPTGTGVVAAPSTYMV--DGRQYVSVAV  539 (573)
T ss_dssp             EEEEECSSCCCSCCEEEEE--TTEEEEEEEE
T ss_pred             EEEEECCCCCCCCCEEEEE--CCEEEEEEEE
T ss_conf             5799898994516779998--9999999993

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=86.65  E-value=0.31  Score=23.58  Aligned_cols=83  Identities=14%  Similarity=0.202  Sum_probs=52.7

Q ss_pred             CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCEEEEECC-CCCEE
Q ss_conf             84599961898888642222230433322688889877666122124874214579653499830224999969-99877
Q 005484          534 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVISP-GGSIL  612 (694)
Q Consensus       534 ~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils~-~G~il  612 (694)
                      .|.++++++.    .+...||..++..+.-     |         .|+     ..+..=| ....+..+--+|. +|++|
T Consensus       452 ~G~l~A~D~~----TG~~~W~~~~~~~~~g-----g---------~ls-----TagglVF-~G~~Dg~l~A~Da~TGe~L  507 (596)
T d1w6sa_         452 LGQIKAYNAI----TGDYKWEKMERFAVWG-----G---------TMA-----TAGDLVF-YGTLDGYLKARDSDTGDLL  507 (596)
T ss_dssp             CEEEEEECTT----TCCEEEEEEESSCCCS-----B---------CEE-----ETTTEEE-EECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEEECC----CCCEECCCCCCCCCCC-----C---------EEE-----ECCCEEE-EECCCCEEEEEECCCCCEE
T ss_conf             5538998078----8856233278888744-----1---------468-----6699799-9789995999999998483


Q ss_pred             EEEECCCCCCCCCEEEECCCCCCCCEEEEC
Q ss_conf             997489999766178505899852399962
Q 005484          613 TSIDLPAPPTHALVCEDFSNDGLTDVILMT  642 (694)
Q Consensus       613 ~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT  642 (694)
                      =++.|++...++||.=-.  ||.-=|+|.+
T Consensus       508 W~~~~~~~~~a~P~tY~~--dGkQYvav~~  535 (596)
T d1w6sa_         508 WKFKIPSGAIGYPMTYTH--KGTQYVAIYY  535 (596)
T ss_dssp             EEEECSSCCCSCCEEEEE--TTEEEEEEEE
T ss_pred             EEEECCCCCCCCCEEEEE--CCEEEEEEEE
T ss_conf             699899995407768998--9999999993

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.22  E-value=0.89  Score=20.76  Aligned_cols=83  Identities=14%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             ECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE-EECCEEEEECC-CC
Q ss_conf             53845999618988886422222304333226888898776661221248742145796534998-30224999969-99
Q 005484          532 TNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVISP-GG  609 (694)
Q Consensus       532 ~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils~-~G  609 (694)
                      ...|.+++++..-    |..+||...+..+.     +|.         |+     ..+  -.|.+ ..+..+--+|. +|
T Consensus       463 ~~~G~l~AiD~~T----G~i~W~~~~~~p~~-----~g~---------ls-----tag--glVF~Gt~dg~l~A~Da~TG  517 (582)
T d1flga_         463 DHVGSLRAMDPVS----GKVVWEHKEHLPLW-----AGV---------LA-----TAG--NLVFTGTGDGYFKAFDAKSG  517 (582)
T ss_dssp             SCSEEEEEECTTT----CCEEEEEEESSCCC-----SCC---------EE-----ETT--TEEEEECTTSEEEEEETTTC
T ss_pred             CCCCEEEEECCCC----CCEEEECCCCCCCC-----CCE---------EE-----ECC--CEEEEECCCCEEEEEECCCC
T ss_conf             8877599980789----95873267799974-----501---------69-----769--86999679996999999998


Q ss_pred             CEEEEEECCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             87799748999976617850589985239996
Q 005484          610 SILTSIDLPAPPTHALVCEDFSNDGLTDVILM  641 (694)
Q Consensus       610 ~il~s~~Lp~pP~ap~iv~DfngDG~nDiIVv  641 (694)
                      ++|=+.+||....++||.=..  ||.-=|+|+
T Consensus       518 e~LW~~~~~~~~~~~P~ty~~--~G~qYv~i~  547 (582)
T d1flga_         518 KELWKFQTGSGIVSPPITWEQ--DGEQYLGVT  547 (582)
T ss_dssp             CEEEEEECSSCCCSCCEEEEE--TTEEEEEEE
T ss_pred             CEEEEEECCCCCCCCCEEEEE--CCEEEEEEE
T ss_conf             686798899996216779998--999999999