Citrus Sinensis ID: 005552

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccEEEEcccccccccEEccccEEEEEcccccccEEEEEEEccccccccEEEEEEccccccccccEEEEEEcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHccEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEccccccccccccccEEEEEEEcccccEEEEEEccccccEEEEcccccccccEEEEEcccccccccccccccHHHHHHHHccccccccEEEEEccEEEEEEEcccccc
ccEEEEcccccccccccEccccHHccccHHHcccccccEEEEcccccccEHcccccccccccccccccccccccccHcccccccccccEEccccccccccccccccEEEEEEEccccEEEEEEEccccccccccEEEEEccccccccccEEEEEEccccccEEEEEEEccccccccccccccccEEEcccHHHcccccccccccccccccccccccEEEccccccccccccccccHHHccEEEEcHHHHHccccccccccccEccccccccccHHHEcccccccccEccccHHHHHHHHHHHHHHHHcccccEEEEccHHHHcccccccccccccccccccccccccccccccHHHHHHHcccHHHccEEEEcccccccccEccccccccccHHHccccHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccEcccccccEEcccHcccccHHHHHHHHHHHHHHHHcccccccHccccccEEEcccccccccccccccEEEEEEEccccccEEEEEEcccccEEEEcccccccEEEEEEEccccccccccccccccccHccccccccccccEEEEcccEEEEEEEcccccc
mellqftsspllhgsskfinspefyksklsnlkkpptttfrccnhpnktshfansKAFENVTKNLVIRASKSAELETavikkpqsqrfqvskgyptpfgatlrdggvnfsIFSSNAVSATLCLITLsdlqenkvteEIALDSFANKTGDVWHVFLKGDfkdmlygykfdgkfspqeghyfdptkivldPYAKAVISraqfgvlgpdencwpqmaclvptpedefdwegdlplkypqrdlIIYEVHVrgftrhessktehpgtylGVVEKLDHLkgefynysgcgntfncnhpVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRgsslwdsvnvygipiegdllttgtplrspplidlisndpilRGVKLIAEAWdtgglyqvgifphwgiwsewngKYRDIVRQFIKGTDGFAGAFAEclcgspnlyqgggrkpwnsinfvcahdgfsladlvsynqkhnlangednndgethnnswncgqegeFANILVKKLRRRQMRNFFLCLMVsqgvpmismgdeyghtkggnnntychdndinyfrwdkkeesksdfFRFCCLLTKFRHeceslglsdfptadrlqwhghapglpdwsdksRFVAFTLIDSVKGEIYVAFNashlpviislpkrpgyrweplvdtskpepfdflssdlpakEIAIKqyapfldanlypmlSYSSIILLLSPDENA
mellqftsspllhgsskfiNSPEFYKSKLSNLKKPPTTTFRCCNHPNKtshfanskafENVTKNLVIRASKSAELETAvikkpqsqrfqvskGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTrhessktehpgtyLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLangednndGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHApglpdwsdkSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANlypmlsyssiilllspDENA
**************************************TFRCCNH*****HFANSKAFENVTKNLVIRA********************VSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRH******HPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQK*****************SWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLL******
*******SSP**********************************************************************************GYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIIL*LSP****
MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFT********HPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
*ELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFA********************************QRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNL**********THNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MELLQFTSSPLLHGSSKFINSPEFYKSKLSNLKKPPTTTFRCCNHPNKTSHFANSKAFENVTKNLVIRASKSAELETAVIKKPQSQRFQVSKGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGKFSPQEGHYFDPTKIVLDPYAKAVISRAQFGVLGPDENCWPQMACLVPTPEDEFDWEGDLPLKYPQRDLIIYEVHVRGFTRHESSKTEHPGTYLGVVEKLDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query691 2.2.26 [Sep-21-2011]
O04196783 Isoamylase 1, chloroplast yes no 0.597 0.527 0.814 0.0
Q9M0S5764 Isoamylase 3, chloroplast no no 0.589 0.532 0.457 1e-105
P0A4Y4721 Glycogen operon protein G yes no 0.393 0.377 0.486 1e-74
P0A4Y5721 Glycogen operon protein G yes no 0.393 0.377 0.486 1e-74
P45178659 Glycogen operon protein G yes no 0.487 0.511 0.357 6e-61
A4WFL4657 Glycogen debranching enzy yes no 0.390 0.410 0.414 2e-60
A8AQY2657 Glycogen debranching enzy yes no 0.390 0.410 0.410 5e-58
Q6CZK1658 Glycogen debranching enzy yes no 0.520 0.547 0.355 1e-57
Q8ZLG6658 Glycogen debranching enzy no no 0.470 0.493 0.371 2e-57
C0Q0L1658 Glycogen debranching enzy no no 0.470 0.493 0.371 2e-57
>sp|O04196|ISOA1_ARATH Isoamylase 1, chloroplastic OS=Arabidopsis thaliana GN=ISA1 PE=1 SV=1 Back     alignment and function desciption
 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/414 (81%), Positives = 377/414 (91%), Gaps = 1/414 (0%)

Query: 274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
           KGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWVTEMHVDGFRFDL SIM+R SSLWD+ N
Sbjct: 367 KGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAAN 426

Query: 334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWS 393
           VYG  +EGDLLTTGTP+  PP+ID+ISNDPILRGVKLIAEAWD GGLYQVG+FPHWGIWS
Sbjct: 427 VYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWS 486

Query: 394 EWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADL 453
           EWNGK+RD+VRQFIKGTDGF+GAFAECLCGSPNLYQGG RKPW+SINF+CAHDGF+LADL
Sbjct: 487 EWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGG-RKPWHSINFICAHDGFTLADL 545

Query: 454 VSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVP 513
           V+YN K+NLANGE+NNDGE HN SWNCG+EG+FA+I VK+LR+RQMRNFF+ LMVSQGVP
Sbjct: 546 VTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVP 605

Query: 514 MISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLS 573
           MI MGDEYGHTKGGNNNTYCHDN +NYFRWDKKEE+ SDFFRFC +L KFR ECESLGL+
Sbjct: 606 MIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLN 665

Query: 574 DFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGY 633
           DFPTA RLQWHG AP +P+WS+ SRFVAF+L+DSVK EIYVAFN SHL  ++SLP RPGY
Sbjct: 666 DFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGY 725

Query: 634 RWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSP 687
           RWEP VDTSKP P+D ++ DLP +E A+KQY  FLDAN+YPMLSYSSIILLLSP
Sbjct: 726 RWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDANVYPMLSYSSIILLLSP 779
Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 6EC: 8
>sp|Q9M0S5|ISOA3_ARATH Isoamylase 3, chloroplastic OS=Arabidopsis thaliana GN=ISA3 PE=1 SV=2 Back     alignment and function description
>sp|P0A4Y4|GLGX_MYCTU Glycogen operon protein GlgX homolog OS=Mycobacterium tuberculosis GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P0A4Y5|GLGX_MYCBO Glycogen operon protein GlgX homolog OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|P45178|GLGX_HAEIN Glycogen operon protein GlgX homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A4WFL4|GLGX_ENT38 Glycogen debranching enzyme OS=Enterobacter sp. (strain 638) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|A8AQY2|GLGX_CITK8 Glycogen debranching enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q6CZK1|GLGX_ERWCT Glycogen debranching enzyme OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|Q8ZLG6|GLGX_SALTY Glycogen debranching enzyme OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=glgX PE=3 SV=1 Back     alignment and function description
>sp|C0Q0L1|GLGX_SALPC Glycogen debranching enzyme OS=Salmonella paratyphi C (strain RKS4594) GN=glgX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query691
139867053791 isoamylase-type starch-debranching enzym 0.603 0.527 0.868 0.0
359484905748 PREDICTED: isoamylase 1, chloroplastic-l 0.655 0.605 0.793 0.0
296090473 809 unnamed protein product [Vitis vinifera] 0.655 0.559 0.793 0.0
147821468512 hypothetical protein VITISV_027248 [Viti 0.655 0.884 0.793 0.0
224087162 826 predicted protein [Populus trichocarpa] 0.654 0.547 0.749 0.0
224142633 801 predicted protein [Populus trichocarpa] 0.655 0.565 0.789 0.0
449463916 810 PREDICTED: isoamylase 1, chloroplastic-l 0.655 0.559 0.768 0.0
356527718 796 PREDICTED: isoamylase 1, chloroplastic-l 0.654 0.567 0.784 0.0
449507370 810 PREDICTED: isoamylase 1, chloroplastic-l 0.655 0.559 0.768 0.0
27728145 793 isoamylase isoform 1 [Solanum tuberosum] 0.596 0.519 0.837 0.0
>gi|139867053|dbj|BAF52941.1| isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] Back     alignment and taxonomy information
 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/418 (86%), Positives = 388/418 (92%)

Query: 274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
           KGEFYNYSGCGNTFNC+HPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTR SSLWD+ N
Sbjct: 374 KGEFYNYSGCGNTFNCSHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDATN 433

Query: 334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWS 393
           V+G PIEGDLLTTGTPL SPPLIDLISNDPILRGVKLIAEAWD GGLYQVG FPHWGIWS
Sbjct: 434 VFGAPIEGDLLTTGTPLGSPPLIDLISNDPILRGVKLIAEAWDAGGLYQVGTFPHWGIWS 493

Query: 394 EWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADL 453
           EWNGKYRD VRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGF+LADL
Sbjct: 494 EWNGKYRDTVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFTLADL 553

Query: 454 VSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVP 513
           V+Y  KHNL+NGEDNNDGE HNNSWNCGQEGEF +  VKKLR+RQMRN FL LMVSQGVP
Sbjct: 554 VTYTNKHNLSNGEDNNDGENHNNSWNCGQEGEFVSTSVKKLRKRQMRNLFLSLMVSQGVP 613

Query: 514 MISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLS 573
           MI MGDEYGHTKGGNNNTYCHDN +NYF+WDKKEES SDFFRFCCL+TKFR ECESLGL 
Sbjct: 614 MIYMGDEYGHTKGGNNNTYCHDNYLNYFQWDKKEESSSDFFRFCCLVTKFRQECESLGLD 673

Query: 574 DFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGY 633
           DFPT++RLQWHGH PG+PDWS+ SRFVAFTL+DSVKGEIYVAFN SHLP  I+LP+RPGY
Sbjct: 674 DFPTSERLQWHGHFPGMPDWSETSRFVAFTLVDSVKGEIYVAFNMSHLPFTITLPERPGY 733

Query: 634 RWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDANLYPMLSYSSIILLLSPDENA 691
           RWEPLVDTSKP PFDFL+ DLP ++IAI+QYA FLDAN+YPMLSYSSIILL +PD+NA
Sbjct: 734 RWEPLVDTSKPIPFDFLTPDLPGRDIAIQQYAHFLDANMYPMLSYSSIILLRTPDQNA 791

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359484905|ref|XP_002265964.2| PREDICTED: isoamylase 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296090473|emb|CBI40669.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147821468|emb|CAN70034.1| hypothetical protein VITISV_027248 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224087162|ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|222854066|gb|EEE91613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224142633|ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|222866093|gb|EEF03224.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449463916|ref|XP_004149676.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356527718|ref|XP_003532455.1| PREDICTED: isoamylase 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|449507370|ref|XP_004163012.1| PREDICTED: isoamylase 1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|27728145|gb|AAN15317.1| isoamylase isoform 1 [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query691
TAIR|locus:2061216783 ISA1 "isoamylase 1" [Arabidops 0.574 0.507 0.809 5.7e-277
TAIR|locus:2122343764 ISA3 "isoamylase 3" [Arabidops 0.435 0.393 0.514 1.6e-115
UNIPROTKB|Q8EGU6750 glgX "Glycogen isoamylase GlgX 0.277 0.256 0.497 2.2e-83
TIGR_CMR|SO_1495750 SO_1495 "glycogen operon prote 0.277 0.256 0.497 2.2e-83
UNIPROTKB|P15067657 glgX [Escherichia coli K-12 (t 0.457 0.480 0.344 2.3e-76
UNIPROTKB|Q9KKS1656 VC_A1029 "Glycogen operon prot 0.405 0.426 0.392 5.1e-68
TIGR_CMR|VC_A1029656 VC_A1029 "glycogen operon prot 0.405 0.426 0.392 5.1e-68
TAIR|locus:2014500882 DBE1 "debranching enzyme 1" [A 0.409 0.320 0.309 7.2e-60
UNIPROTKB|Q81KP1713 BAS4597 "Putative pullulanase" 0.257 0.249 0.266 9.3e-17
TIGR_CMR|BA_4953713 BA_4953 "pullulanase, putative 0.257 0.249 0.266 9.3e-17
TAIR|locus:2061216 ISA1 "isoamylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1849 (655.9 bits), Expect = 5.7e-277, Sum P(2) = 5.7e-277
 Identities = 322/398 (80%), Positives = 361/398 (90%)

Query:   274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
             KGEFYNYSGCGNTFNCNHPVVRQFI+DCLRYWVTEMHVDGFRFDL SIM+R SSLWD+ N
Sbjct:   367 KGEFYNYSGCGNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFDLGSIMSRSSSLWDAAN 426

Query:   334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGLYQVGIFPHWGIWS 393
             VYG  +EGDLLTTGTP+  PP+ID+ISNDPILRGVKLIAEAWD GGLYQVG+FPHWGIWS
Sbjct:   427 VYGADVEGDLLTTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWS 486

Query:   394 EWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADL 453
             EWNGK+RD+VRQFIKGTDGF+GAFAECLCGSPNLYQGG RKPW+SINF+CAHDGF+LADL
Sbjct:   487 EWNGKFRDVVRQFIKGTDGFSGAFAECLCGSPNLYQGG-RKPWHSINFICAHDGFTLADL 545

Query:   454 VSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVP 513
             V+YN K+NLANGE+NNDGE HN SWNCG+EG+FA+I VK+LR+RQMRNFF+ LMVSQGVP
Sbjct:   546 VTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVP 605

Query:   514 MISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLS 573
             MI MGDEYGHTKGGNNNTYCHDN +NYFRWDKKEE+ SDFFRFC +L KFR ECESLGL+
Sbjct:   606 MIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLN 665

Query:   574 DFPTADRLQWHGHAPGLPDWSDKSRFVAFTLIDSVKGEIYVAFNASHLPVIISLPKRPGY 633
             DFPTA RLQWHG AP +P+WS+ SRFVAF+L+DSVK EIYVAFN SHL  ++SLP RPGY
Sbjct:   666 DFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGY 725

Query:   634 RWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLDAN 671
             RWEP VDTSKP P+D ++ DLP +E A+KQY  FLDAN
Sbjct:   726 RWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLDAN 763
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004556 "alpha-amylase activity" evidence=ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0010021 "amylopectin biosynthetic process" evidence=IMP
GO:0010368 "chloroplast isoamylase complex" evidence=IDA
GO:0019156 "isoamylase activity" evidence=IDA;IMP
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2122343 ISA3 "isoamylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EGU6 glgX "Glycogen isoamylase GlgX" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1495 SO_1495 "glycogen operon protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P15067 glgX [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KKS1 VC_A1029 "Glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_A1029 VC_A1029 "glycogen operon protein GlgX" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TAIR|locus:2014500 DBE1 "debranching enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KP1 BAS4597 "Putative pullulanase" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4953 BA_4953 "pullulanase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04196ISOA1_ARATH3, ., 2, ., 1, ., 6, 80.81400.59760.5274yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.680.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 1e-173
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 1e-136
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 1e-127
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 5e-89
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 5e-78
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 2e-37
cd02856130 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early 5e-36
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 1e-35
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 4e-34
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 1e-33
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 2e-29
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 6e-26
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 7e-25
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 2e-19
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 4e-17
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 4e-13
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 5e-12
cd11234101 cd11234, E_set_GDE_N, N-terminal Early set domain 1e-11
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 1e-09
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 2e-08
cd0286097 cd02860, E_set_Pullulanase, Early set domain assoc 3e-08
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 9e-08
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 3e-07
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 3e-07
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 3e-07
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 1e-06
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 3e-06
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 2e-05
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 4e-05
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 5e-05
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 8e-05
PLN02877970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 2e-04
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 2e-04
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 3e-04
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 4e-04
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 7e-04
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 0.001
TIGR02103898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 0.002
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 0.003
PLN02877 970 PLN02877, PLN02877, alpha-amylase/limit dextrinase 0.004
TIGR02103 898 TIGR02103, pullul_strch, alpha-1,6-glucosidases, p 0.004
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 0.004
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information 
 Score =  501 bits (1294), Expect = e-173
 Identities = 157/298 (52%), Positives = 189/298 (63%), Gaps = 23/298 (7%)

Query: 270 LDHLKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLW 329
           LD     + NY+GCGNT N NHPVV + I+D LRYWVTEMHVDGFRFDLAS++ R     
Sbjct: 157 LDPDGPYYLNYTGCGNTLNTNHPVVLRLILDSLRYWVTEMHVDGFRFDLASVLGRDPD-- 214

Query: 330 DSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTGGL-YQVGIFPH 388
                            G P  +PPL++ I+ DP+L GVKLIAE WD GG  YQVG FP 
Sbjct: 215 -----------------GFPDPNPPLLEAIAQDPVLSGVKLIAEPWDIGGGGYQVGNFPP 257

Query: 389 WGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGF 448
              W+EWN +YRD VR+F +G  G  G FA  L GS +L+   GR P  S+NF+ AHDGF
Sbjct: 258 G--WAEWNDRYRDDVRRFWRGDGGLVGDFATRLAGSSDLFGHDGRSPSASVNFITAHDGF 315

Query: 449 SLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMV 508
           +LADLVSYN+KHN ANGE+N DG   N SWNCG EG   +  +  LRRRQMRN    L++
Sbjct: 316 TLADLVSYNEKHNEANGENNRDGHNDNLSWNCGVEGPTDDPEILALRRRQMRNLLATLLL 375

Query: 509 SQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHE 566
           SQG PM+  GDE+G T+ GNNN YC DN+I++  WD  E   SD FRF   L   R  
Sbjct: 376 SQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWLDWDLLEA-DSDLFRFVRRLIALRKA 432

Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Length = 433
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|199886 cd02856, E_set_GDE_Isoamylase_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|199893 cd11234, E_set_GDE_N, N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase) Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase Back     alignment and domain information
>gnl|CDD|233729 TIGR02103, pullul_strch, alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 691
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
PLN02960897 alpha-amylase 100.0
PLN03244872 alpha-amylase; Provisional 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK09505683 malS alpha-amylase; Reviewed 99.97
PRK09441479 cytoplasmic alpha-amylase; Reviewed 99.95
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 99.87
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 99.84
PLN00196428 alpha-amylase; Provisional 99.84
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.82
PLN02361401 alpha-amylase 99.82
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.81
PRK13840495 sucrose phosphorylase; Provisional 99.81
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 99.78
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 99.78
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 99.77
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.76
PLN02784894 alpha-amylase 99.6
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.58
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.54
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.53
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 99.34
PF14872 811 GHL5: Hypothetical glycoside hydrolase 5 99.25
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 99.07
PRK14511879 maltooligosyl trehalose synthase; Provisional 99.02
TIGR02401825 trehalose_TreY malto-oligosyltrehalose synthase. T 98.91
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 98.89
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.86
PRK05402 726 glycogen branching enzyme; Provisional 98.82
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 98.79
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.79
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.53
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 98.37
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 97.11
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 96.91
PRK145071693 putative bifunctional 4-alpha-glucanotransferase/m 96.75
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 96.28
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 94.49
PLN03244 872 alpha-amylase; Provisional 94.28
smart0063281 Aamy_C Aamy_C domain. 93.69
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 93.63
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 93.39
PRK12568 730 glycogen branching enzyme; Provisional 89.17
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 88.25
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 86.68
cd02857116 CD_pullulan_degrading_enzymes_N_term CD and pullul 85.91
PF02903120 Alpha-amylase_N: Alpha amylase, N-terminal ig-like 81.74
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information 
Probab=100.00  E-value=6.3e-93  Score=812.48  Aligned_cols=546  Identities=42%  Similarity=0.766  Sum_probs=458.7

Q ss_pred             CCCCCCCCeEEeCCcEEEEEEcCCCCeEEEEeeeCCCccCCceeeEeecccccCCCCCeEEEEEcCCCCCceEEEEEcCc
Q 005552           92 KGYPTPFGATLRDGGVNFSIFSSNAVSATLCLITLSDLQENKVTEEIALDSFANKTGDVWHVFLKGDFKDMLYGYKFDGK  171 (691)
Q Consensus        92 ~g~~~~lGa~~~~~g~~F~vwAP~A~~V~L~l~~~~~~~~~~~~~~~~m~~~~~~~~gvW~~~v~g~~~g~~Y~y~i~g~  171 (691)
                      +|.|.+|||++.++||+|+||||+|++|+|+||+..+   ..+..+++|.   ++++|||+++|+++.+|++|+|+|+|+
T Consensus         1 ~g~~~~LGa~~~~~g~~F~vwap~A~~V~L~l~~~~~---~~~~~~~~m~---~~~~gvW~~~v~~~~~g~~Y~yrv~g~   74 (688)
T TIGR02100         1 PGMPFPLGATWDGQGVNFALFSANAEKVELCLFDAQG---EKEEARLPLP---ERTDDIWHGYLPGAQPGQLYGYRVHGP   74 (688)
T ss_pred             CCCCcCCCeEEeCCcEEEEEECCCCCEEEEEEEcCCC---CceeeEEecc---cCCCCEEEEEECCCCCCCEEEEEEeee
Confidence            3789999999999999999999999999999996432   1234567885   467899999999999999999999998


Q ss_pred             cCCCCCCccCCCccccCccccceecccccCC-------CCC--------CCCCCCCceecccCCCCCCCCCCC-CCCCCC
Q 005552          172 FSPQEGHYFDPTKIVLDPYAKAVISRAQFGV-------LGP--------DENCWPQMACLVPTPEDEFDWEGD-LPLKYP  235 (691)
Q Consensus       172 ~~~~~g~~~~~~~~~~DPYA~~~~~~~~~~~-------~~~--------~~~~~~~~~~~v~~~~~~~~W~~~-~~~~~~  235 (691)
                      +.|..|++|++.+.++||||+++..+..++.       ..+        .+.......|+|++  .+|.|+++ ..+..+
T Consensus        75 ~~~~~g~~f~~~~~~~DPYA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d--~~~~w~~~~~~p~~~  152 (688)
T TIGR02100        75 YDPENGHRFNPNKLLLDPYAKALDGDLIWDDALFGYRIGHPDQDLSFDERDSAPGMPKAVVVD--PDFDWGGDEQRPRTP  152 (688)
T ss_pred             eCCCCCcccCcCceecCcCceeecCCCcccccccccccccccccccccccccccccCceEEeC--CCCCCCCcccCCCCC
Confidence            8899999999999999999999986533211       000        00000112567776  36999987 455678


Q ss_pred             CCCceEEEEeecCccc-cCCCCCCCCcchhccccc--cccc---------------------------------------
Q 005552          236 QRDLIIYEVHVRGFTR-HESSKTEHPGTYLGVVEK--LDHL---------------------------------------  273 (691)
Q Consensus       236 ~~~~vIYElHVr~Ft~-~~~~~~~~~Gtf~g~~ek--LdyL---------------------------------------  273 (691)
                      ++++||||+|||+||. +++++...+|||+|++++  ||||                                       
T Consensus       153 ~~d~iIYE~hvr~Ft~~~~~~~~~~~Gtf~Gi~~~~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~  232 (688)
T TIGR02100       153 WEDTIIYEAHVKGFTQLHPDIPEELRGTYAGLAHPAMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFF  232 (688)
T ss_pred             ccccEEEEEEhHHhcCCCCCCCcccccCHHHHhccchhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCccccc
Confidence            8999999999999998 444445678999999996  9999                                       


Q ss_pred             ---------------------------------------C--------------------------CccccccCccCcCC
Q 005552          274 ---------------------------------------K--------------------------GEFYNYSGCGNTFN  288 (691)
Q Consensus       274 ---------------------------------------~--------------------------g~y~n~sg~g~dln  288 (691)
                                                             .                          +.|.++++||++||
T Consensus       233 a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~~~~~g~gn~ln  312 (688)
T TIGR02100       233 APEPRYLASGQVAEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYYINDTGTGNTLN  312 (688)
T ss_pred             ccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCceecCCCCcccccc
Confidence                                                   0                          22334678999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHhccccEEEEeccccccccCcccccccccCcccccccccCCCCCCChhHHHHHhcCCCCCCc
Q 005552          289 CNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGV  368 (691)
Q Consensus       289 ~~~p~vr~~iid~l~yWl~eygVDGFRfD~~~~i~~~~~~w~~~~~~g~~~~~~~~~~g~~~~~~~~~~~i~~dp~~~~~  368 (691)
                      +++|+||+||+++++||++||||||||||+|..|.+....+..                    ..++.+++.++|+++++
T Consensus       313 ~~~p~vr~~i~d~l~~W~~e~gIDGfR~D~a~~l~~~~~~~~~--------------------~~~~~~~i~~d~~~~~~  372 (688)
T TIGR02100       313 LSHPRVLQMVMDSLRYWVTEMHVDGFRFDLATTLGRELYGFDM--------------------LSGFFTAIRQDPVLAQV  372 (688)
T ss_pred             CCCHHHHHHHHHHHHHHHHHcCCcEEEEechhhhccccCCCcc--------------------cHHHHHHHHhCcccCCe
Confidence            9999999999999999999999999999999999764211111                    13477888888899999


Q ss_pred             EEEeecCCCC-CcccccCCCCCcccceecCcccHHHHHHHcCCCCcHHHHHHHHcCCCccccCCCCCCCceEEEeecCCC
Q 005552          369 KLIAEAWDTG-GLYQVGIFPHWGIWSEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDG  447 (691)
Q Consensus       369 ~liaE~w~~~-~~~~~~~fp~~g~~~~wn~~f~d~~r~~~~g~~~~~~~~~~~l~g~~~~~~~~~~~p~~~vnyl~nHD~  447 (691)
                      +||||.|+.+ +.+++++||.  .+++||+.|++.+|+|++|+.+....|+..|+++.++|....+.|.++||||+|||+
T Consensus       373 ~ligE~W~~~~~~~~~~~~~~--~~~~~Nd~frd~ir~f~~g~~~~~~~~~~~l~gs~~~~~~~~~~~~~~iNyv~~HD~  450 (688)
T TIGR02100       373 KLIAEPWDIGPGGYQVGNFPP--GWAEWNDRYRDDMRRFWRGDAGMIGELANRLTGSSDLFEHNGRRPWASINFVTAHDG  450 (688)
T ss_pred             EEEEeeecCCCCcccccCCCC--ceEEecHHHHHHHHHHHcCCCCcHHHHHHHHhCCHhhccccCCCcCEEEEEEeCCCC
Confidence            9999999986 5667777874  679999999999999999998889999999999988887666678999999999999


Q ss_pred             CchhhhhhhccccccccCCCCCCCCCCCCCCccCCCCchhhHHHHHHHHHHHHHHHHHHHhcCCceeEecCCccccCCCC
Q 005552          448 FSLADLVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGVPMISMGDEYGHTKGG  527 (691)
Q Consensus       448 ~rl~d~~~~~~k~n~~~G~~~~dg~~~n~sw~~g~~g~~~~~~~~~~r~~~~k~a~a~lltspGiP~iy~G~E~g~~~~g  527 (691)
                      +||+|+++|+.|||.+||+.|+||+++|+|||||.||++.+..+.++|.+++|++++++||+||+||||||||||+++.|
T Consensus       451 ~tl~D~~~~~~khn~~nge~n~dg~~~N~S~n~g~eG~~~~~~~~~~r~~~~r~~~a~l~~s~GiP~i~~GdE~g~t~~G  530 (688)
T TIGR02100       451 FTLRDLVSYNEKHNEANGENNRDGHNDNYSWNCGVEGPTDDPAINALRRRQQRNLLATLLLSQGTPMLLAGDEFGRTQQG  530 (688)
T ss_pred             chHHHHHHhhccchhhccccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCceeeecHhhccCCCC
Confidence            99999999999999999999999999999999999999999888889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccccCcccccchhHHHHHHHHHHHHHhCccCCCCCCCCC-------cceEe---ccCCCCCCCCCC-C
Q 005552          528 NNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDFPTA-------DRLQW---HGHAPGLPDWSD-K  596 (691)
Q Consensus       528 ~~n~y~~~~~~~~~~W~~~~~~~~~l~~f~r~Li~LRk~~paL~~g~~~~~-------~~i~~---~~~~~~~~~~~~-~  596 (691)
                      ++|+||+++++++|+|+..+.+ .++++|+|+||+|||+||+|+.+.+...       ..|+|   +|..+..++|+. .
T Consensus       531 ~~n~y~~~~~~~~~dW~~~~~~-~~l~~~~k~Li~lRk~~~~l~~~~~~~~~~~~~~~~~v~~~~~~G~~~~~~~w~~~~  609 (688)
T TIGR02100       531 NNNAYCQDNEIGWVDWSLDEGD-DELLAFTKKLIALRKAHPVLRRERFFDGRNEADGLKDVTWLNADGEPMTEEDWENPE  609 (688)
T ss_pred             CCCCccCCCcccccCccccccc-HHHHHHHHHHHHHHHhCchhcccccccCCcccCCCCceEEeCCCCCcCChhhcCCCC
Confidence            9999999999999999977666 8999999999999999999999877642       46999   777888888976 4


Q ss_pred             CcEEEEEEEccC-------CCEEEEEEeCCCCcEEEEcCCCCCCceEEEecCCCCCCCCCcCCCCchhHHHhhhcCCCCC
Q 005552          597 SRFVAFTLIDSV-------KGEIYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAIKQYAPFLD  669 (691)
Q Consensus       597 ~~vlaf~r~~~~-------~~~llVv~N~~~~~~~v~lp~~~g~~w~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (691)
                      .++++|.+....       .+.++|++|.+.+.+++.||..+ ..|+++++|.......+.                ...
T Consensus       610 ~~~l~~~l~~~~~~~~~~~~~~~~v~~N~~~~~~~~~lP~~~-~~w~~~~dt~~~~~~~~~----------------~~~  672 (688)
T TIGR02100       610 TRLLCMVLSDMDPGGDPGADDSLLLLLNAGPEPVPFKLPGGG-GRWELVLDTADEEAPGIH----------------LDA  672 (688)
T ss_pred             CCEEEEEEeCCccCCCCCCCCeEEEEECCCCCCeEEECCCCC-CcEEEEecCCCCCCcccc----------------ccC
Confidence            689999997532       14799999999999999999753 589999999653321110                022


Q ss_pred             CceEEeeCCeEEEEEe
Q 005552          670 ANLYPMLSYSSIILLL  685 (691)
Q Consensus       670 ~~~~~l~p~s~~Vl~~  685 (691)
                      ...+.|+|+|++||++
T Consensus       673 ~~~~~v~~~s~~vl~~  688 (688)
T TIGR02100       673 GQEAELPARSVLLLRR  688 (688)
T ss_pred             CCEEEEcCCEEEEEeC
Confidence            4579999999999974

This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain Back     alignment and domain information
>PF02903 Alpha-amylase_N: Alpha amylase, N-terminal ig-like domain; InterPro: IPR004185 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 4e-72
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 1e-58
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 4e-43
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 6e-20
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 7e-16
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 8e-07
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 8e-07
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 9e-07
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 1e-06
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure 
Iteration: 1

 Score =  269 bits (688), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 165/400 (41%), Positives = 214/400 (53%), Gaps = 54/400 (13%)
Query: 274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
           K  + +++G GNT N +HP V Q ++D LRYWVTEMHVDGFRFDLA+ + R     + +N
Sbjct: 320 KRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELYSVNMLN 379
Query: 334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIW 392
            + I ++                     DPIL  VKLIAE WD G G YQVG FP+   W
Sbjct: 380 TFFIALQ--------------------QDPILSQVKLIAEPWDVGQGGYQVGNFPYQ--W 417
Query: 393 SEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLAD 452
           +EWNGKYRD +R+F +G        A  L GSP++Y G  + P+ SIN+V +HDGF+L D
Sbjct: 418 AEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLED 477
Query: 453 LVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGV 512
           LVSYNQKHN ANG +N DG   N SWNCG EG   +  V   R +Q RNF + L+VSQG 
Sbjct: 478 LVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGT 537
Query: 513 PMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTK-------FRH 565
           PMI  GDE   T+ GNNN +C DN+I +F W+  +E KS F  F   + +       FR 
Sbjct: 538 PMILGGDELSRTQRGNNNAFCQDNEITWFDWN-LDERKSKFLEFVKKMIQFYRAHPAFRR 596
Query: 566 ECESLG--LSDFPTADRLQW--HGHAPGLPDWSDKSRFVAFTLIDSVKGEI--------- 612
           E    G  L   P  D   +   G       WS  ++ V F L  SV  EI         
Sbjct: 597 ERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIAD 656
Query: 613 ---YVAFNASHLPVIISLPKRPGYRWEPLVDTS----KPE 645
               +  NA+   V +  PK    +WE ++ +     KPE
Sbjct: 657 DSFLIILNANPNNVKVKFPKG---KWELVISSYLREIKPE 693
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query691
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 0.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 2e-54
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 0.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 2e-58
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 0.0
1bf2_A 750 Isoamylase; hydrolase, glycosidase, debranching en 1e-47
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 1e-130
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 1e-46
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 1e-127
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 6e-51
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 1e-126
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 3e-43
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 1e-121
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 5e-49
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 1e-117
4aio_A 884 Limit dextrinase; hydrolase, pullulanase, glycosid 3e-44
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 1e-112
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 2e-41
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-92
2fhf_A 1083 Pullulanase; multiple domain, beta-alpha-barrel, a 1e-30
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 1e-07
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 6e-06
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 4e-07
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 9e-06
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 7e-07
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 2e-06
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 2e-06
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 8e-05
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 3e-04
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 9e-05
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 1e-04
3aml_A755 OS06G0726400 protein; starch-branching, transferas 1e-04
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-04
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-04
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 3e-04
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 3e-04
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 4e-04
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 4e-04
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 4e-04
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 6e-04
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 8e-04
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 8e-04
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
 Score =  547 bits (1411), Expect = 0.0
 Identities = 157/412 (38%), Positives = 204/412 (49%), Gaps = 50/412 (12%)

Query: 274 KGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVN 333
           K  + +++G GNT N +HP V Q ++D LRYWVTEMHVDGFRFDLA+ + R     +   
Sbjct: 320 KRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAALARELYSVN--- 376

Query: 334 VYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGIW 392
                                    +  DPIL  VKLIAE WD G G YQVG FP+   W
Sbjct: 377 -----------------MLNTFFIALQQDPILSQVKLIAEPWDVGQGGYQVGNFPYQ--W 417

Query: 393 SEWNGKYRDIVRQFIKGTDGFAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLAD 452
           +EWNGKYRD +R+F +G        A  L GSP++Y G  + P+ SIN+V +HDGF+L D
Sbjct: 418 AEWNGKYRDSIRRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLED 477

Query: 453 LVSYNQKHNLANGEDNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCLMVSQGV 512
           LVSYNQKHN ANG +N DG   N SWNCG EG   +  V   R +Q RNF + L+VSQG 
Sbjct: 478 LVSYNQKHNEANGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGT 537

Query: 513 PMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGL 572
           PMI  GDE   T+ GNNN +C DN+I +F W+  E  KS F  F   + +F     +   
Sbjct: 538 PMILGGDELSRTQRGNNNAFCQDNEITWFDWNLDER-KSKFLEFVKKMIQFYRAHPAFRR 596

Query: 573 SDFPTADR-----------LQWHGHAPGLPDWSDKSRFVAFTLIDSVKGE---------- 611
             +    +               G       WS  ++ V F L  SV  E          
Sbjct: 597 ERYFQGKKLFGMPLKDVTFYTLEGREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIAD 656

Query: 612 --IYVAFNASHLPVIISLPKRPGYRWEPLVDTSKPEPFDFLSSDLPAKEIAI 661
               +  NA+   V +  PK     WE ++ +   E           KE+ I
Sbjct: 657 DSFLIILNANPNNVKVKFPKGK---WELVISSYLREIKPEERIIEGEKELEI 705
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 691
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 1e-60
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 1e-09
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 4e-35
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 5e-08
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 5e-28
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 8e-14
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 4e-26
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 2e-20
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 3e-20
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 5e-19
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 5e-18
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 7e-15
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 2e-14
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 1e-13
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 3e-13
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 2e-12
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 2e-12
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 3e-12
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 1e-11
d1bf2a2113 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amylo 1e-11
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 3e-11
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 3e-06
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 1e-10
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 6e-10
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 3e-06
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 9e-10
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 1e-09
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 2e-08
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 3e-08
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 8e-08
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 2e-07
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 5e-07
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 8e-07
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 2e-06
d2bhua197 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydro 6e-06
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 9e-06
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 9e-06
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 2e-05
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 7e-05
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 7e-05
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 2e-04
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 2e-04
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 2e-04
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 0.003
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 0.004
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

 Score =  208 bits (530), Expect = 1e-60
 Identities = 100/309 (32%), Positives = 136/309 (44%), Gaps = 16/309 (5%)

Query: 277 FYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDS----V 332
           FY+ +G G  FN  + V +  IVD L YW   M VDGFRFDLAS++              
Sbjct: 173 FYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCLNGAYTASAP 232

Query: 333 NVYGIPIEGDLLTTGTPLRSPPLIDLISNDPILRGVKLIAEAWDTG-GLYQVGIFPHWGI 391
           N        D   +   +        +       G+ L AE W  G   YQ+G FP    
Sbjct: 233 NCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQG-- 290

Query: 392 WSEWNGKYRDIVRQFIKGTDG---FAGAFAECLCGSPNLYQGGGRKPWNSINFVCAHDGF 448
           WSEWNG +RD +RQ          +    A    GS NL+Q  GR PWNSINF+  HDG 
Sbjct: 291 WSEWNGLFRDSLRQAQNELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGM 350

Query: 449 SLADLVSYNQKHNLANGE--DNNDGETHNNSWNCGQEGEFANILVKKLRRRQMRNFFLCL 506
           +L D+ S N  +N        ++ G + N SW+ G        +    +RR  R      
Sbjct: 351 TLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTGAAV---DQRRAARTGMAFE 407

Query: 507 MVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHE 566
           M+S G P++  GDEY  T   NNN Y  D+  N+  +    +   +F+ F   L  FR  
Sbjct: 408 MLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQS-NFYTFAQRLIAFRKA 466

Query: 567 CESLGLSDF 575
             +L  S +
Sbjct: 467 HPALRPSSW 475
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 113 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Length = 97 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query691
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 99.97
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 99.97
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 99.97
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 99.97
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 99.96
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 99.95
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 99.95
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 99.95
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 99.94
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 99.94
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 99.91
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 99.9
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.89
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.89
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.85
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.71
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.67
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 99.48
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 98.89
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 98.63
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 98.63
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 98.56
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.46
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.42
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 98.42
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 97.92
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 97.82
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 97.73
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 97.43
d2fhfa4118 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 97.2
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 97.1
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 97.06
d1iv8a2653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 96.99
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 94.95
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 94.9
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 93.35
d1j0ha1123 Neopullulanase, N-terminal domain {Bacillus stearo 93.04
d1ea9c1121 Maltogenic amylase, N-terminal domain N {Bacillus 92.9
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 92.58
d1wzla1120 Maltogenic amylase, N-terminal domain N {Thermoact 91.78
d1ji1a1122 Maltogenic amylase, N-terminal domain N {Thermoact 91.23
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 91.01
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 89.74
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 88.98
d1e43a190 Bacterial alpha-Amylase {Bacillus licheniformis [T 82.6
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 82.37
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 82.25
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 82.15
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 81.16
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Isoamylase, central domain
species: Pseudomonas amyloderamosa [TaxId: 32043]

Probab=100.00  E-value=0  Score=344.99  Aligned_cols=342  Identities=35%  Similarity=0.567  Sum_probs=247.3

Q ss_pred             CCCCCCCCCCCCCCEEEEEEECCCCCCC-CCCCCCCCCHHCCCCCCCCC-------------------------------
Q ss_conf             9999999999987039998415742269-99998874320201112465-------------------------------
Q 005552          226 WEGDLPLKYPQRDLIIYEVHVRGFTRHE-SSKTEHPGTYLGVVEKLDHL-------------------------------  273 (691)
Q Consensus       226 W~~~~~~~~~~~~~iIYElhVr~Ft~~~-~~~~~~~Gtf~gi~ekLdyL-------------------------------  273 (691)
                      |....+|.+.++++||||||||+|+.+. +.+...+|||+|+++|||||                               
T Consensus         4 ~~~~~~~~~~~~d~viYei~v~~f~~~~~~~~~~~~Gd~~Gi~~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~   83 (475)
T d1bf2a3           4 QSTGTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQ   83 (475)
T ss_dssp             CCCCCCCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTC
T ss_pred             CCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             98999989887551899988247336799988666678999985159999749998994997718776666665556676


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q 005552          274 --------------------------------------------------------------------------------  273 (691)
Q Consensus       274 --------------------------------------------------------------------------------  273 (691)
                                                                                                      
T Consensus        84 ~y~GY~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIrVilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (475)
T d1bf2a3          84 NYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATY  163 (475)
T ss_dssp             CCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88998846677867653568777999999999999998557689997023422377764234787676422367644543


Q ss_pred             ----CCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----8931--0366866867899999999999999999993560299992552012468654354225865456655689
Q 005552          274 ----KGEF--YNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRGSSLWDSVNVYGIPIEGDLLTTG  347 (691)
Q Consensus       274 ----~g~y--~~~sg~g~dln~~np~Vr~~iid~l~yWi~e~gVDGFR~Da~~~i~~~~~~w~~~~~~~~~~~~~~~~~g  347 (691)
                          .+.+  ..+.+++++||+.||+|++++++++++|++++||||||+|++.+|.+..  +........+.........
T Consensus       164 ~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~gvDGfR~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  241 (475)
T d1bf2a3         164 YELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSC--LNGAYTASAPNCPNGGYNF  241 (475)
T ss_dssp             BCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBCC--SSSSCCTTSTTCTTCSCCB
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCHHH--HCCCHHCCCCCCCCCCCCH
T ss_conf             34688862111577765751010168888889998732221487547872175412233--2021000576576652104


Q ss_pred             CCC-CCHH---HHHHHHCCC--CCCCCEEEEECCCCCC-CCCCCCCCCCCCCCEECCCCCHHHHHHHCCC---CCCHHHH
Q ss_conf             989-9936---799974299--9887489940378898-6433678888534134371008999978199---9928889
Q 005552          348 TPL-RSPP---LIDLISNDP--ILRGVKLIAEAWDTGG-LYQVGIFPHWGIWSEWNGKYRDIVRQFIKGT---DGFAGAF  417 (691)
Q Consensus       348 ~~~-~~~~---~~~~i~~dp--~~~~~~liaE~w~~~~-~~~~~~fp~~~~~~~wn~~f~~~~~~~~~g~---~~~~~~~  417 (691)
                      ... ....   ....+..++  ......+++|.|+.+. ....+.|+.  .+..|+..+.+.++.+....   .......
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (475)
T d1bf2a3         242 DAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQ--GWSEWNGLFRDSLRQAQNELGSMTIYVTQD  319 (475)
T ss_dssp             CTTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCCCTTCSCT--TCEEECHHHHHHHHHHHHCBTTBCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHHHCCHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             444200443046666543210256663300251113665211467751--067752246899999841566301567665


Q ss_pred             HHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99981998642599999986177753389986444663012342126999--9999999877766888830238999999
Q 005552          418 AECLCGSPNLYQGGGRKPWNSINFVCAHDGFSLADLVSYNQKHNLANGED--NNDGETHNNSWNCGQEGEFANILVKKLR  495 (691)
Q Consensus       418 ~~~l~gs~~~~~~~~~~~~~~infi~nHD~~rl~d~~~~~~k~n~~~g~~--~~dg~~~~~sw~~g~~g~~~~~~~~~~~  495 (691)
                      +..+.+....+...++.+...+||+++||+.++.+++.+..+++......  ..++...+++|+.+..+.+...   ..+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~hd~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  396 (475)
T d1bf2a3         320 ANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTSTNYSWDQGMSAGTGAA---VDQ  396 (475)
T ss_dssp             HHHHTTCHHHHGGGTCCGGGEEECSCCSSSCCHHHHTTCSSCCCCCCTTSCCCCCCCSCCCCCCTTTTTTSCCH---HHH
T ss_pred             HHHCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH---HHH
T ss_conf             55403532332015767777776777502226888765100215765133355777655654334766775205---899


Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99999999999860893168157765567899999777899865336476223310699999999999975745899998
Q 005552          496 RRQMRNFFLCLMVSQGVPMISMGDEYGHTKGGNNNTYCHDNDINYFRWDKKEESKSDFFRFCCLLTKFRHECESLGLSDF  575 (691)
Q Consensus       496 ~~~~k~a~a~llt~pGiP~Iy~GdE~G~~~~g~~n~y~~~~~~~~~~W~~~~~~~~~l~~~~k~Li~LRk~~paL~~g~~  575 (691)
                      .+++|++++++||+||+||||||||+|+++.|++|+|++++.+++++|+..+.+ .++++|+|+||+|||++|+|+.+.|
T Consensus       397 ~~~~r~~~~~llt~pGiP~iyyGdE~g~~~~g~~~~y~~~~~~~~~~~~~~~~~-~~l~~~~~~Li~lR~~~paLr~~~~  475 (475)
T d1bf2a3         397 RRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSSANWLTYSWTTDQ-SNFYTFAQRLIAFRKAHPALRPSSW  475 (475)
T ss_dssp             HHHHHHHHHHHHHSSSEEEEETTGGGTCCCTTCSCCTTCCSTTTSCCCCCCHHH-HHHHHHHHHHHHHHHHCGGGSCSSC
T ss_pred             HHHHHHHHHHHHHHCCCHHEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHCCHHHCCCCC
T ss_conf             999999999999825633014177548467897665458986675588755034-7999999999999853853278989
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d2fhfa4 b.71.1.1 (A:966-1083) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha1 b.1.18.2 (A:1-123) Neopullulanase, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ea9c1 b.1.18.2 (C:1-121) Maltogenic amylase, N-terminal domain N {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzla1 b.1.18.2 (A:1-120) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure