Citrus Sinensis ID: 005677

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680---
MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDITNSR
cccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccEEEEccccccEEEEEEEEEccccHHHHHHHHHHHHccccEEccccccccHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEccccEEEEEEEEEcccccHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHcccEEEEccEEEccccEEEEEEEEEEEccEEEEEEEccccccccccccccEEEEcccccccccccHHHHHHHHHHHHccccccccEEEEcccccccEEEEEEEEEEccccEEEEEEEEcccccccccccEEEEEEEEEEcccccccEEEEEEEEccEEEEEEEEEEccccccccccEEEEEEEEEEEccccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEccccccEEcccccccccccccccccEEEEEEEEEEcccccccccEEEEEEEEEEEccccccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEccccccccEEccccccccccccccccccEEEEEEEEEEEEEEEcccccEEEEEcccccccEEEEEEEEEEEEcccccccccccccccccccc
cccccccEEEEccccccccccccccccHHHHHHccccccHHHEcccccccccccHHcHcHHHHHHHcccccccEEcccccccccHHHcHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccEEEEEEcccccEEEEEEEEEEcccccHHHHHHHHHccccHHHHccccccccHHHHHHHHHHHHHccccccEEEEEccccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHccccEccHHHHHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEcccEEEEEEEEEEccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEEEEccccEEEEEEEEcccccccccccEEEEEEEEEccccccccEEEEEEEEccEEEEEEEEEccccEccccccccEEEEEEEccEcccccccccccccccEEEEEccEEEEcEEcccccEEEEEEEEEEEEEccccccccccccccccccccccccccEEEEEEccccccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEEEEccccEEEEEEEcccccccccccHHEEccccccEccccccccccccEEEEEEEEEEEEEcccccccccccccccccEEEEEEEcccccccccccccEEHcccccccccc
mplrnddvrfissplkippfrpeppvpffaQTLTKSKNSLSHLIYSlnestrstepFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLslnqssaefpaqselsTQLQqkaqqphsvsrsdeERVLISEVLVrnkdgeelerkDLETEALTALKACRANSALTVREVQEDVHRIIDsgyfcscmpvavdtrdGIRLVfqvepnqefhglvceganvlptkfvedafrdgygkvvNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRfldrktgeptkgktrpeTILRQLTTKKGQVYSMLQGKRDVETVLTMGImedvsiipqpagdtgkvdLIMNVverpsggfsagggissgitsgplsglIGSFAYshrnvfgrnqKLNIslergqidsifrinytdpwiegddkrtsrtimvqnsrtpgthvhgnqpdnssltigrvtagmefsrpirpkwsgtvglifqhsgardekgnpiikdfysspltasgktnDEMLIAKFEsvytgsgdqgsSMFVFNMeqglpvwpewlffnRVNARARKGVEIGPARLLLSLsgghvvgnfspheafaiggtnsvrgyeegavgsgrsyvvgsgeisfpmvcddyqisvlygsksenILKLYHCMFMMLKSAcncashelaegtditnsr
mplrnddvrfissplkippfrpePPVPFFAQTLTKSKNSLSHLIYSLnestrstepFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKaqqphsvsrsdeervlisevlvrnkdgeelerkdlETEALTALkacransaltvreVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAfrdgygkvvnirrlDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAevnnisirfldrktgeptkgktrpetilrqlttkkgqvysmlqgKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRinytdpwiegddkrtsRTIMVQnsrtpgthvhgnqpdnssLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHsgardekgnpiIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHElaegtditnsr
MPLRNDDVRFISSPLKIppfrpeppvpffAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPsggfsagggissgitsgplsgligsFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARlllslsggHVVGNFSPHEAFAIGGTNSVRGYEEgavgsgrsyvvgsgEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDITNSR
****************************F***********SHLIYSL**********TRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASL************************************************************ALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLD****************LRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVV***********************GLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEG********************************IGRVTAGMEFSRPIRPKWSGTVGLIFQHSG*******PIIKDFYS***********EMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASH************
**********************************************************************************************************************************RSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDI****
MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQ******************************ERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDITNSR
**L*NDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDIT***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSKSENILKLYHCMFMMLKSACNCASHELAEGTDITNSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query683 2.2.26 [Sep-21-2011]
Q9C5J8732 Outer envelope protein 80 yes no 0.919 0.857 0.734 0.0
Q6H7M7665 Outer envelope protein 80 yes no 0.732 0.751 0.792 0.0
A2X208665 Outer envelope protein 80 N/A no 0.732 0.751 0.792 0.0
Q43715809 Protein TOC75, chloroplas N/A no 0.651 0.550 0.240 7e-20
P0C891158 Outer envelope protein 80 N/A no 0.172 0.746 0.328 1e-17
Q84Q83817 Protein TOC75, chloroplas no no 0.553 0.462 0.231 6e-17
Q9STE8818 Protein TOC75-3, chloropl no no 0.550 0.459 0.240 1e-16
Q9K1H0797 Outer membrane protein as yes no 0.430 0.368 0.240 3e-06
Q5IZC8396 Protein TOC75-4, chloropl no no 0.127 0.219 0.319 0.0004
>sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1 Back     alignment and function desciption
 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/663 (73%), Positives = 542/663 (81%), Gaps = 35/663 (5%)

Query: 1   MPLRNDDVRFISSPLKIPPFRPEPPVPF----------FAQTLTKSKNSLSHLIYSLN-- 48
           M   NDDVRF SS ++I    P+               F   L+ ++NSL+ ++ SL   
Sbjct: 1   MHCHNDDVRFSSSSIRIHSPSPKEQHSLLTNLQSCSKTFVSHLSNTRNSLNQMLQSLKNR 60

Query: 49  -----ESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTG---------AVDTL--VNF 92
                 S R     T+ L S  + + GKS  I  + +  T           V+T+  ++ 
Sbjct: 61  HTPPPRSVRRPNLPTQMLNSVTQLMIGKSSPISLSLIQSTQFNWSESRDENVETIRGLSS 120

Query: 93  PLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQP--HSVSRSDEERVLISEVLVRNKDGE 150
           PLLC ASLSL +     P +S  S + +   QQ   HSVSR+ EERVLISEVLVR KDGE
Sbjct: 121 PLLCCASLSLTR-----PNESTQSVEGKDTVQQQKGHSVSRNAEERVLISEVLVRTKDGE 175

Query: 151 ELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVF 210
           ELERKDLE EAL ALKACRANSALT+REVQEDVHRII+SGYFCSC PVAVDTRDGIRL+F
Sbjct: 176 ELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCSCTPVAVDTRDGIRLMF 235

Query: 211 QVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGM 270
           QVEPNQEF GLVCE ANVLP+KF+ +AFRDG+GKV+NI+RL+E ITSINGWYMERGLFG+
Sbjct: 236 QVEPNQEFRGLVCENANVLPSKFIHEAFRDGFGKVINIKRLEEAITSINGWYMERGLFGI 295

Query: 271 VSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSM 330
           VS ++ LSGGI+RLQVAEAEVNNISIRFLDRKTGEPTKGKT PETILRQLTTKKGQVYSM
Sbjct: 296 VSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPETILRQLTTKKGQVYSM 355

Query: 331 LQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGP 390
           LQGKRDV+TVL MGIMEDVSIIPQPAGD+GKVDLIMN VERPSGGFSAGGGISSGITSGP
Sbjct: 356 LQGKRDVDTVLAMGIMEDVSIIPQPAGDSGKVDLIMNCVERPSGGFSAGGGISSGITSGP 415

Query: 391 LSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNS 450
           LSGLIGSFAYSHRN+FGRNQKLN+SLERGQIDSIFRINYTDPWIEGDDKRTSR+IMVQNS
Sbjct: 416 LSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNS 475

Query: 451 RTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKD 510
           RTPG  VHGNQPDNSSLTIGRVTAG+E+SRP RPKW+GT GLIFQH+GARDE+GNPIIKD
Sbjct: 476 RTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKD 535

Query: 511 FYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARA 570
           FYSSPLTASGK +DE ++AK ES+YTGSGDQGS+MF FNMEQGLPV PEWL FNRV  RA
Sbjct: 536 FYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRA 595

Query: 571 RKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEIS 630
           RKG+ IGPAR L SLSGGHVVG FSPHEAF IGGTNSVRGYEEGAVGSGRSYVVGSGE+S
Sbjct: 596 RKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELS 655

Query: 631 FPM 633
           FP+
Sbjct: 656 FPV 658
Plays an essential role during early stages of plastid development.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2 Back     alignment and function description
>sp|A2X208|OEP80_ORYSI Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1 Back     alignment and function description
>sp|Q43715|TOC75_PEA Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1 Back     alignment and function description
>sp|P0C891|OEP80_PEA Outer envelope protein 80, chloroplastic (Fragments) OS=Pisum sativum GN=OEP80 PE=1 SV=1 Back     alignment and function description
>sp|Q84Q83|TOC75_ORYSJ Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2 Back     alignment and function description
>sp|Q9STE8|TC753_ARATH Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1 Back     alignment and function description
>sp|Q9K1H0|BAMA_NEIMB Outer membrane protein assembly factor BamA OS=Neisseria meningitidis serogroup B (strain MC58) GN=bamA PE=1 SV=1 Back     alignment and function description
>sp|Q5IZC8|TC754_ARATH Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query683
255544822700 sorting and assembly machinery (sam50) p 0.910 0.888 0.796 0.0
18419973732 outer envelope protein [Arabidopsis thal 0.919 0.857 0.734 0.0
297808025732 hypothetical protein ARALYDRAFT_909999 [ 0.912 0.851 0.744 0.0
356547291677 PREDICTED: outer envelope protein of 80 0.878 0.886 0.740 0.0
359478392673 PREDICTED: outer envelope protein of 80 0.865 0.878 0.762 0.0
356557629677 PREDICTED: outer envelope protein of 80 0.875 0.883 0.741 0.0
224075788682 predicted protein [Populus trichocarpa] 0.849 0.850 0.740 0.0
357454321672 Outer envelope protein of 80 kDa [Medica 0.871 0.885 0.738 0.0
449448734757 PREDICTED: outer envelope protein 80, ch 0.780 0.704 0.782 0.0
449502616757 PREDICTED: LOW QUALITY PROTEIN: outer en 0.780 0.704 0.782 0.0
>gi|255544822|ref|XP_002513472.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] gi|223547380|gb|EEF48875.1| sorting and assembly machinery (sam50) protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  988 bits (2554), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/639 (79%), Positives = 548/639 (85%), Gaps = 17/639 (2%)

Query: 1   MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRK 60
           MP +ND VRF SS LKIP   P       A  L+ +K S ++ I SL   TRS    +R 
Sbjct: 1   MP-QNDTVRFTSSSLKIPLLPPPQQQ-QQAPQLSYTKISFTNFIDSL--ITRSKIHISRS 56

Query: 61  LQSFAEHLYGKSVRICSTCLSMTGAVDTLVN-----FPLLCSASLSLNQSSAEFPAQSEL 115
           + S  +        +C   LS+  + DT+++      P+LCSASLSL Q     P +SE 
Sbjct: 57  VNSPRKLTL---PLLCFASLSLPQSKDTVISESHTQSPILCSASLSLTQ-----PGESEN 108

Query: 116 STQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALT 175
               Q+ +    S SR DEERVLISEVLVRNKDGEELERKDLE EA+ ALKACRANSALT
Sbjct: 109 IVTQQKGSGGGLSGSRHDEERVLISEVLVRNKDGEELERKDLEAEAVAALKACRANSALT 168

Query: 176 VREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVE 235
           VREVQEDVHRIIDSGYFCSC PVAVDTRDGIRLVFQVEPNQEFHGLVCEGA+VLPTKF++
Sbjct: 169 VREVQEDVHRIIDSGYFCSCTPVAVDTRDGIRLVFQVEPNQEFHGLVCEGASVLPTKFLQ 228

Query: 236 DAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNIS 295
           DAFR+GYGKVVNIR LD+VITSINGWYMERGLFG+VSGVEILSGGI+RLQVAEAEVNNIS
Sbjct: 229 DAFREGYGKVVNIRHLDDVITSINGWYMERGLFGLVSGVEILSGGILRLQVAEAEVNNIS 288

Query: 296 IRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQP 355
           IRFLDRKTGEPTKGKT+PETILRQLTTKKGQVYSMLQGKRDV+TVLTMGIMEDVSIIPQP
Sbjct: 289 IRFLDRKTGEPTKGKTKPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIIPQP 348

Query: 356 AGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNIS 415
           AGDTGKVDL+MNVVERPSGGFSAGGGISSGITSGPLSGLIGSF YSHRNVFGRNQKLNIS
Sbjct: 349 AGDTGKVDLVMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFTYSHRNVFGRNQKLNIS 408

Query: 416 LERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAG 475
           LERGQIDSIFRINYTDPWI+GDDKRTSRTIMVQNSRTPG  VH  QP NSSLTIGRVTAG
Sbjct: 409 LERGQIDSIFRINYTDPWIQGDDKRTSRTIMVQNSRTPGNLVHSYQPGNSSLTIGRVTAG 468

Query: 476 MEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVY 535
           +EFSRP+RPKWSGT GLIFQH+GA DEKGNPIIKD YSSPLTASGKT+D ML+AKFESVY
Sbjct: 469 VEFSRPLRPKWSGTAGLIFQHAGAHDEKGNPIIKDHYSSPLTASGKTHDNMLLAKFESVY 528

Query: 536 TGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFS 595
           TGSGD GSSMFV N+EQGLP+WPEWLFFNRVNARARKGVEIGPA  LLSLSGGHVVGNFS
Sbjct: 529 TGSGDHGSSMFVLNVEQGLPLWPEWLFFNRVNARARKGVEIGPALFLLSLSGGHVVGNFS 588

Query: 596 PHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMV 634
           PHEAFAIGGTNSVRGYEEGAVGS RSY VGSGEISFP++
Sbjct: 589 PHEAFAIGGTNSVRGYEEGAVGSARSYAVGSGEISFPLM 627

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|18419973|ref|NP_568378.1| outer envelope protein [Arabidopsis thaliana] gi|75168961|sp|Q9C5J8.1|OEP80_ARATH RecName: Full=Outer envelope protein 80, chloroplastic; AltName: Full=Chloroplastic outer envelope protein of 80 kDa; Short=AtOEP80; AltName: Full=Protein TOC75-V; Short=AtToc75-V gi|13430586|gb|AAK25915.1|AF360205_1 unknown protein [Arabidopsis thaliana] gi|14532858|gb|AAK64111.1| unknown protein [Arabidopsis thaliana] gi|332005348|gb|AED92731.1| outer envelope protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297808025|ref|XP_002871896.1| hypothetical protein ARALYDRAFT_909999 [Arabidopsis lyrata subsp. lyrata] gi|297317733|gb|EFH48155.1| hypothetical protein ARALYDRAFT_909999 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356547291|ref|XP_003542049.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|359478392|ref|XP_002285507.2| PREDICTED: outer envelope protein of 80 kDa, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|356557629|ref|XP_003547118.1| PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224075788|ref|XP_002304768.1| predicted protein [Populus trichocarpa] gi|222842200|gb|EEE79747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357454321|ref|XP_003597441.1| Outer envelope protein of 80 kDa [Medicago truncatula] gi|355486489|gb|AES67692.1| Outer envelope protein of 80 kDa [Medicago truncatula] Back     alignment and taxonomy information
>gi|449448734|ref|XP_004142120.1| PREDICTED: outer envelope protein 80, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449502616|ref|XP_004161694.1| PREDICTED: LOW QUALITY PROTEIN: outer envelope protein 80, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query683
TAIR|locus:2183164732 OEP80 "outer envelope protein 0.875 0.816 0.697 7.7e-222
TAIR|locus:2081423362 AT3G44160 "AT3G44160" [Arabido 0.335 0.632 0.348 6e-35
TAIR|locus:2102767818 TOC75-III "translocon at the o 0.469 0.392 0.201 1e-09
UNIPROTKB|Q74AT3765 yaeT "Outer membrane protein a 0.222 0.198 0.230 1.1e-05
TIGR_CMR|GSU_2268765 GSU_2268 "outer membrane prote 0.222 0.198 0.230 1.1e-05
TAIR|locus:2183164 OEP80 "outer envelope protein of 80 kDa" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2142 (759.1 bits), Expect = 7.7e-222, P = 7.7e-222
 Identities = 432/619 (69%), Positives = 483/619 (78%)

Query:    33 LTKSKNSLSHLIYSL-NEST---RSTE-PF--TRKLQSFAEHLYGKSVRICSTCLSMTGA 85
             L+ ++NSL+ ++ SL N  T   RS   P   T+ L S  + + GKS  I  + +  T  
Sbjct:    43 LSNTRNSLNQMLQSLKNRHTPPPRSVRRPNLPTQMLNSVTQLMIGKSSPISLSLIQSTQF 102

Query:    86 ---------VDTL--VNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDE 134
                      V+T+  ++ PLLC ASLSL + +    +     T  QQK    HSVSR+ E
Sbjct:   103 NWSESRDENVETIRGLSSPLLCCASLSLTRPNESTQSVEGKDTVQQQKG---HSVSRNAE 159

Query:   135 ERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCS 194
             ERVLISEVLVR KDGEELERKDLE EAL ALKACRANSALT+REVQEDVHRII+SGYFCS
Sbjct:   160 ERVLISEVLVRTKDGEELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFCS 219

Query:   195 CMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEV 254
             C PVAVDTRDGIRL+FQVEPNQEF GLVCE ANVLP+KF+ +AFRDG+GKV+NI+RL+E 
Sbjct:   220 CTPVAVDTRDGIRLMFQVEPNQEFRGLVCENANVLPSKFIHEAFRDGFGKVINIKRLEEA 279

Query:   255 ITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPE 314
             ITSINGWYMERGLFG+VS ++ LSGGI+RLQVAEAEVNNISIRFLDRKTGEPTKGKT PE
Sbjct:   280 ITSINGWYMERGLFGIVSDIDTLSGGIVRLQVAEAEVNNISIRFLDRKTGEPTKGKTSPE 339

Query:   315 TILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPXX 374
             TILRQLTTKKGQVYSMLQGKRDV+TVL MGIMEDVSIIPQPAGD+GKVDLIMN VERP  
Sbjct:   340 TILRQLTTKKGQVYSMLQGKRDVDTVLAMGIMEDVSIIPQPAGDSGKVDLIMNCVERPSG 399

Query:   375 XXXXXXXXXXXXXXXXXXXXXXXFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWI 434
                                    FAYSHRN+FGRNQKLN+SLERGQIDSIFRINYTDPWI
Sbjct:   400 GFSAGGGISSGITSGPLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWI 459

Query:   435 EGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIF 494
             EGDDKRTSR+IMVQNSRTPG  VHGNQPDNSSLTIGRVTAG+E+SRP RPKW+GT GLIF
Sbjct:   460 EGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIF 519

Query:   495 QHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGL 554
             QH+GARDE+GNPIIKDFYSSPLTASGK +DE ++AK ES+YTGSGDQGS+MF FNMEQGL
Sbjct:   520 QHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGL 579

Query:   555 PVWPEWLFFNRVNARARKGVEIGPARXXXXXXXXHVVGNFSPHEAFAIGGTNSVRGYEEX 614
             PV PEWL FNRV  RARKG+ IGPAR        HVVG FSPHEAF IGGTNSVRGYEE 
Sbjct:   580 PVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEG 639

Query:   615 XXXXXXXXXXXXXEISFPM 633
                          E+SFP+
Sbjct:   640 AVGSGRSYVVGSGELSFPV 658
GO:0003674 "molecular_function" evidence=ND
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0019867 "outer membrane" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009536 "plastid" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009658 "chloroplast organization" evidence=IMP
GO:0010207 "photosystem II assembly" evidence=RCA
TAIR|locus:2081423 AT3G44160 "AT3G44160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102767 TOC75-III "translocon at the outer envelope membrane of chloroplasts 75-III" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q74AT3 yaeT "Outer membrane protein assembly factor BamA" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2268 GSU_2268 "outer membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2X208OEP80_ORYSINo assigned EC number0.79240.73200.7518N/Ano
Q6H7M7OEP80_ORYSJNo assigned EC number0.79240.73200.7518yesno
Q9C5J8OEP80_ARATHNo assigned EC number0.73450.91940.8579yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
OEP80
OEP80 (OUTER ENVELOPE PROTEIN OF 80 KDA); AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75 ; Plays an essential role during early stages of plastid development (732 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
TIC110
TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110); Encodes a protein thoug [...] (1016 aa)
   •• • 0.999
TOC34
TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding; Outer membra [...] (313 aa)
      • 0.998
TOC159
TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159); transmembrane receptor; [...] (1503 aa)
      • 0.992
TIC55
TIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55); 2 iron, 2 sulfur cluster [...] (539 aa)
    • • 0.986
TOC33
TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ pro [...] (297 aa)
      • 0.966
TIC20
TIC20 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20); Tic20 is believed to func [...] (274 aa)
      • 0.962
TIC40
TIC40; chloroplast protein import (Tic40) (447 aa)
      • 0.927
TOC120
ATTOC120; GTP binding; component of TOC complex, plastid protein import machinery. ; GTPase inv [...] (1089 aa)
      • 0.921
TOC132
TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132); transmembrane recept [...] (1206 aa)
      • 0.921
ATOEP16-1
ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1); P-P-bond-hydrolysis-driven protein transmembra [...] (148 aa)
      • 0.879

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
TIGR00992718 TIGR00992, 3a0901s03IAP75, chloroplast envelope pr 2e-52
COG4775766 COG4775, COG4775, Outer membrane protein/protectiv 3e-39
pfam01103317 pfam01103, Bac_surface_Ag, Surface antigen 7e-35
TIGR03303741 TIGR03303, OM_YaeT, outer membrane protein assembl 1e-23
PLN03138796 PLN03138, PLN03138, Protein TOC75; Provisional 9e-16
pfam0724478 pfam07244, Surf_Ag_VNR, Surface antigen variable n 2e-04
>gnl|CDD|130065 TIGR00992, 3a0901s03IAP75, chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information 
 Score =  192 bits (489), Expect = 2e-52
 Identities = 133/565 (23%), Positives = 218/565 (38%), Gaps = 68/565 (12%)

Query: 138 LISEVLVRNKDGEELERKDLETEALTALKACRANSALTVR-EVQEDVHRIIDSGYFCSCM 196
           L  E+ V    G   E+ D E +          +  L       E V  I D     +  
Sbjct: 109 LQKELEVLATCGM-FEKVDYEGKT-------TQDGRLGTTISFAESVWAIADRFRCINVG 160

Query: 197 PVAVDTRDGIRLVFQVEPNQEFHGL--------VCEGAN-VLPTKFVEDAFRDGYG-KVV 246
            +       + +  +V+   EF           + E    +LP + V++ F   YG  +V
Sbjct: 161 LMPQSKPLEMDVDMEVKEKPEFTRRLEIRYKRRIAEARPCLLPQEVVDETFGMLYGQGIV 220

Query: 247 NIRRLDEVITSINGWYMERGL-FGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGE 305
           + R L E+   +  WY   G     V     L+   +  +V E ++ N+ I+F D K G 
Sbjct: 221 SARLLQEIRDRVQEWYHNEGYACAQVVNFGNLNTDEVVCEVVEGDITNLQIQFFD-KLGN 279

Query: 306 PTKGKTRPETILRQLTT--KKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVD 363
             +G TR   + R+L    K G V+++  GK  ++ + ++G+  ++ + P+P  +  + +
Sbjct: 280 VVEGNTRDPVVTRELPKQLKPGDVFNIEAGKTALQNINSLGLFSNIEVNPRP-DEMNEGE 338

Query: 364 LIMNV----VERPSGGFSAGGGISSGITSGPLS---GLIGSFAYSHRNVFGRNQKLNISL 416
           +I+ +    +E+ S   S    I  G    P        G+  + HRN+ G N+ L  S+
Sbjct: 339 IIVEIKLKELEQKSAEVSTEWSIVPGRGGRPTLASSQPGGTITFEHRNLQGLNRSLGGSV 398

Query: 417 ERG-----QIDSIFRINYTDPWIEGDD--KRTSRTIMVQNSRTPGTHVHGNQPDNS--SL 467
                   Q D +F++ YT P+++G D  +  + T    NSR       G    N   S+
Sbjct: 399 TTSNFLNPQDDLLFKVEYTHPYLDGVDNPRNRTYTASCFNSRKLSPVFTGGPGVNEVPSI 458

Query: 468 TIGRVTAGMEFSRPIR------PKWSGTVGLIFQHS------GARDEKGNPIIKDFYSSP 515
            + R       +                       S      G R     PI       P
Sbjct: 459 WVDRAGVKANITENFARQSKFTYGLVMEEIFTRDESRHINANGQRSLPSGPI--SADGPP 516

Query: 516 LTASGKTNDEMLIAKF----ESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARAR 571
            T SG   D M   +     ++    +G    S   F ++QGL V   + FFNR      
Sbjct: 517 TTLSGTGVDRMAFLQANITRDNTNFVNGPTVGSRVRFQVDQGLGVGSGFPFFNRHQLTYT 576

Query: 572 K-----GVEIG-----PARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRS 621
           K      VE+G     P  L+L    G  VG+   ++AF +GG  SVRGY  G +G+ R+
Sbjct: 577 KFIQLNWVELGAGKSPPPVLVLHGHYGGCVGDLPSYDAFILGGPYSVRGYNMGELGAARN 636

Query: 622 YVVGSGEISFPMVCDDYQISVLYGS 646
               + EI  P+        V +GS
Sbjct: 637 IFEATAEIRIPIKATHVYAFVEHGS 661

Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the TOC IAP75 protein [Transport and binding proteins, Amino acids, peptides and amines]. Length = 718
>gnl|CDD|227116 COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|216300 pfam01103, Bac_surface_Ag, Surface antigen Back     alignment and domain information
>gnl|CDD|234165 TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional Back     alignment and domain information
>gnl|CDD|219346 pfam07244, Surf_Ag_VNR, Surface antigen variable number repeat Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 683
PLN03138796 Protein TOC75; Provisional 100.0
TIGR00992718 3a0901s03IAP75 chloroplast envelope protein transl 100.0
COG4775766 Outer membrane protein/protective antigen OMA87 [C 100.0
PRK11067803 outer membrane protein assembly factor YaeT; Provi 100.0
TIGR03303741 OM_YaeT outer membrane protein assembly complex, Y 100.0
COG0729594 Outer membrane protein [Cell envelope biogenesis, 100.0
COG2831554 FhaC Hemolysin activation/secretion protein [Intra 100.0
TIGR03303 741 OM_YaeT outer membrane protein assembly complex, Y 99.89
PF01103323 Bac_surface_Ag: Surface antigen; InterPro: IPR0001 99.87
PRK11067 803 outer membrane protein assembly factor YaeT; Provi 99.87
PF03865404 ShlB: Haemolysin secretion/activation protein ShlB 99.86
COG4775 766 Outer membrane protein/protective antigen OMA87 [C 99.85
KOG2602457 consensus Predicted cell surface protein homologou 99.8
PF0847976 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 98.71
PF0724478 Surf_Ag_VNR: Surface antigen variable number repea 98.69
PF0724478 Surf_Ag_VNR: Surface antigen variable number repea 98.58
PLN03138796 Protein TOC75; Provisional 98.5
TIGR00992718 3a0901s03IAP75 chloroplast envelope protein transl 98.23
COG2831554 FhaC Hemolysin activation/secretion protein [Intra 98.06
COG0729594 Outer membrane protein [Cell envelope biogenesis, 97.0
PF0847976 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013 96.24
PF0847869 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013 90.31
PRK05529255 cell division protein FtsQ; Provisional 81.82
>PLN03138 Protein TOC75; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-57  Score=510.09  Aligned_cols=510  Identities=19%  Similarity=0.305  Sum_probs=406.7

Q ss_pred             ccCCCCccccCccccceEEEEEEEeCCCCccChhhHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHcCCCceEeEEEE-
Q 005677          122 KAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAV-  200 (683)
Q Consensus       122 ~~~~~~~~~i~~~~~~~I~~V~~~G~~N~~~~~~~L~~~~~~~l~~~~~g~~~~~~~l~~d~~~L~~~GYf~a~V~~~~-  200 (683)
                      +.-+++.+...--++++|++|+|.|.  +.-..-.+++.+.+.| .+++|..|+...|++|+++|++.|||+ .|.+.+ 
T Consensus       133 ~~~~~~~~~~~~~~~~~vs~v~~~~~--~~~~~~~~e~~l~~~i-~~kpG~v~trsqLq~dv~~I~~tG~F~-~V~~~v~  208 (796)
T PLN03138        133 VNITVPLSKLSGFKRYKVSEIEFFDR--RRNTTVGTEDSFFEMV-TLRPGGVYTKAQLQKELETLASCGMFE-KVDLEGK  208 (796)
T ss_pred             ccceEechhcCCcceEEEEEEEEecc--ccCCCcchHHHHHHHH-hcCCCCccCHHHHHHHHHHHHhcCCce-EEEEEEE
Confidence            34455666778889999999999882  1111112333333345 589999999999999999999999999 887654 


Q ss_pred             -eCCCcEEEEEEEeeCCc--eEEEE------------EecccCCChhHHHHhhccCC-----------------------
Q 005677          201 -DTRDGIRLVFQVEPNQE--FHGLV------------CEGANVLPTKFVEDAFRDGY-----------------------  242 (683)
Q Consensus       201 -~~~~~v~v~~~V~eG~~--~~~I~------------~~G~~~~~~~~L~~~~~~~~-----------------------  242 (683)
                       ..++.+.|+|.|+||+.  +++|+            |+||+.+++.+|.+.+..++                       
T Consensus       209 ~~~dg~v~V~~~i~Eg~~~~I~~I~~i~~~~~~~~~~~~GN~~fs~~el~~~~~~~e~~~~~~~~~a~~~~Lp~~v~~e~  288 (796)
T PLN03138        209 TKPDGTLGLTISFTESTWQSADSFRCINVGLMSQSKPIEMDEDMTDKEKMEYYRSQEKDYKRRIRKARPCLLPKSVRREV  288 (796)
T ss_pred             eCCCCeEEEEEEEEeCCceeeeeeeecccccccccceeeCCcccCHHHHHHHhhccccccccccccccccccchHHHHHH
Confidence             35678999999999997  45888            99999988888777665433                       


Q ss_pred             ------CccccHHHHHHHHHHHHHHHHHCCc-eeEeecEEEeeCcEEEEEEEEEEEeeEEEEEcccCCCCCCCCCCCHHH
Q 005677          243 ------GKVVNIRRLDEVITSINGWYMERGL-FGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPET  315 (683)
Q Consensus       243 ------G~~~~~~~l~~~~~~I~~~y~~~GY-~a~V~~~~~~~~g~v~l~V~e~~I~~I~I~~~~~~~Gn~~~~~t~~~v  315 (683)
                            ...|+.++|++++++|+++|.++|| +++|.+...++++.|+++|.|+.+..|+|++.++. |++.+.+|++++
T Consensus       289 f~~~~~~gklN~e~Lq~die~I~~~Y~d~GYafa~V~~~~~id~g~Vtl~V~EG~i~~I~V~~~dri-g~~i~GNTrD~V  367 (796)
T PLN03138        289 LGMLRDQGKVSARLLQRIRDRVQKWYHDEGYACAQVVNFGNLNTNEVVCEVVEGDITKVVIQFQDKL-GNVVEGNTQLPI  367 (796)
T ss_pred             HhhhccCCcCCHHHHHHHHHHHHHHHHhCCCceEEEecccccCCceEEEEEecccEEEEEEEecccc-cccccCCccCeE
Confidence                  1259999999999999999999999 89999877777788999999999999999865532 332334579999


Q ss_pred             HHHHcc--cCCCCCCChHhHHHHHHHHHhCCCccceeeeeecC-CCCCeEEEEEEEEE--cCCeeEEEeeeecCCCCCC-
Q 005677          316 ILRQLT--TKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPA-GDTGKVDLIMNVVE--RPSGGFSAGGGISSGITSG-  389 (683)
Q Consensus       316 I~r~l~--~~~G~~~~~~~l~~~~~~L~~lg~F~~V~i~~~~~-~~~g~v~l~i~V~E--~~~~~~~~g~gy~s~~~~~-  389 (683)
                      |+|+|.  +++|++||..++++++++|+++|+|++|++.+.|. ..++.++|+|+|+|  +++..++++++|+...+.. 
T Consensus       368 IRREL~~~lkeGd~fN~~~l~~slqRL~~LGlFedV~V~~~Pg~~~p~~VdL~V~VkE~e~~t~~ls~g~g~~~G~g~~P  447 (796)
T PLN03138        368 IDRELPKQLRQGHIFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGGIVVEIKLKELEPKSAEVSTEWSIVPGRGGRP  447 (796)
T ss_pred             EeeecccccCCCcccCHHHHHHHHHHHHhCCCCceeEEEeccCCCCCCeEEEEEEEEEccCCceeEecccccccccCCCC
Confidence            999997  59999999999999999999999999999999885 46899999999999  5556666666665421100 


Q ss_pred             --CCcccEEEEEEEEccCCcCCcEEEEEEEe-----cceeeEEEEEEEccccCC--CCCceEEEEEEEeeecCCcccCCC
Q 005677          390 --PLSGLIGSFAYSHRNVFGRNQKLNISLER-----GQIDSIFRINYTDPWIEG--DDKRTSRTIMVQNSRTPGTHVHGN  460 (683)
Q Consensus       390 --~~~G~~~~~~l~~~NlfG~g~~l~~~~~~-----~~~~~~~~l~y~~P~~~~--~~~~~s~~~~~~~~~~~~~i~~~~  460 (683)
                        ...|+.+.++|+|+||+|+|+++.++++.     ++....+.++|++||+.+  ++.++++++++|.++....+|.+.
T Consensus       448 sl~S~g~~Gtvs~~~~NL~G~g~~L~~~v~~s~~~~g~~d~~f~lsytdPWi~g~~d~~rts~~~~~f~~r~~s~vf~~~  527 (796)
T PLN03138        448 TLASIQPGGTVSFEHRNIQGLNRSILGSVTSSNLLNPQDDLSFKLEYVHPYLDGVYNPRNRTFRASCFNSRKLSPVFTGG  527 (796)
T ss_pred             ccccccceeEEEEeccccccccceEEEEEEeecccCCccceEEEEEeecccccCCCCcccccEEEEEEecCcCCceeeCC
Confidence              13567889999999999999999999998     357889999999999988  555689999999888765555543


Q ss_pred             C--CCCCceEEEEEEEEEEEEeecCCCeEEEEEEEEEEEEeecCCCCceec-------------------------cccC
Q 005677          461 Q--PDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIK-------------------------DFYS  513 (683)
Q Consensus       461 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gl~~~~~~~~~~~~~~~~~-------------------------~~~~  513 (683)
                      .  .........+.++++.+++|+...+.+++++.|+++...|..+.....                         +...
T Consensus       528 ~~~~~~~~~~~~R~G~~~~~~rp~~~~~~~s~g~~~q~v~~~d~~g~~~~~~~~~~~~~~~~~~g~plT~S~~g~D~l~~  607 (796)
T PLN03138        528 PGVDEVPPIWVDRAGFKANITENFTRQSKFTYGLVVEEITTRDETSHICTHGQRVLPSGGLSADGPPTTLSGTGIDRMAF  607 (796)
T ss_pred             CCcccCCcceEeecccceEeecccCCCCceEEEEEEEEEEeecCCCCccccccccccccccccCCCceeeccCCcchhhh
Confidence            1  122344578899999999999888778999999999887766532210                         1122


Q ss_pred             CceeeccccCCceeEEEeeEEEccCCCCCCceeEEeeeeccCcCCCcceEEEEEEEEEEEEEec----------CceEEE
Q 005677          514 SPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIG----------PARLLL  583 (683)
Q Consensus       514 ~~l~~~~d~rD~~~~P~~G~~~~~~G~~G~~~~~~~~e~~~~~~~~~~~f~k~~~~~~~y~~l~----------~~~l~l  583 (683)
                      +.+.+++|++|++..|+.|          .. +.+++||++|++.++..|+|+.+++++|+|+.          +.+|++
T Consensus       608 ~~~~~trd~~~~~~~pt~G----------~~-~~~~~EQ~lpvg~~~~~fNR~~~~~s~fipv~~~~~~~~~~~Pq~la~  676 (796)
T PLN03138        608 LQANITRDNTKFVNGAVVG----------DR-HIFQVDQGLGIGSKFPFFNRHQLTVTKFIQLNKVEKGAGKPPPPVLVL  676 (796)
T ss_pred             eeeeeEeccCCCCCCCCcc----------ce-EEEEeeeeccccCCCCceEEEEEEEEEEEeeccccccccCCCCcEEEE
Confidence            3446678888888888742          33 78899999999888899999999999999982          347999


Q ss_pred             EEeeeeeccCCCccCccccCCCCccccccCCCccccceEEEEeEEEEEecccCCceeEEEecCC
Q 005677          584 SLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVCDDYQISVLYGSK  647 (683)
Q Consensus       584 r~~~G~~~g~lP~~erF~lGG~~svRGy~~~~lgpG~~~~~~s~ElR~pl~~~~~g~g~~~g~~  647 (683)
                      ++++|++.|++|++|.|.|||++|||||.+++++.|++++.+++|||+|+......++++|+.+
T Consensus       677 ~~~aG~~~GdLPpYEAF~LGG~nSVRGY~eG~lg~gRs~l~asaEyRfPi~~~~g~~F~D~Gsd  740 (796)
T PLN03138        677 HGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILEVAAELRIPVRNTHVYAFAEHGTD  740 (796)
T ss_pred             EEeccceecCCCcHHhcccCCCCcccCcccCcccccceeEEEEEEEEeeeccceEEEEEEeccc
Confidence            9999999999999999999999999999999999899999999999999954211244555444

>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11067 outer membrane protein assembly factor YaeT; Provisional Back     alignment and domain information
>TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR03303 OM_YaeT outer membrane protein assembly complex, YaeT protein Back     alignment and domain information
>PF01103 Bac_surface_Ag: Surface antigen; InterPro: IPR000184 The protein sequences of d15 from various strains of Haemophilus influenzae are highly conserved, with only a small variable region identified near the carboxyl terminus of the protein [] Back     alignment and domain information
>PRK11067 outer membrane protein assembly factor YaeT; Provisional Back     alignment and domain information
>PF03865 ShlB: Haemolysin secretion/activation protein ShlB/FhaC/HecB; InterPro: IPR005565 Haemolysin (HlyA) and related toxins are secreted across both the cytoplasmic and outer membranes of Gram-negative bacteria in a process which proceeds without a periplasmic intermediate Back     alignment and domain information
>COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2602 consensus Predicted cell surface protein homologous to bacterial outer membrane proteins [General function prediction only] Back     alignment and domain information
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) Back     alignment and domain information
>PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus Back     alignment and domain information
>PF07244 Surf_Ag_VNR: Surface antigen variable number repeat; InterPro: IPR010827 This motif is found primarily in bacterial surface antigens, normally as variable number repeats at the N terminus Back     alignment and domain information
>PLN03138 Protein TOC75; Provisional Back     alignment and domain information
>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family Back     alignment and domain information
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion] Back     alignment and domain information
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO) Back     alignment and domain information
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain) Back     alignment and domain information
>PRK05529 cell division protein FtsQ; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
3mc8_A316 Potra1-3 Of The Periplasmic Domain Of Omp85 From An 1e-29
2x8x_X235 Structure Of The N-Terminal Domain Of Omp85 From Th 8e-27
>pdb|3MC8|A Chain A, Potra1-3 Of The Periplasmic Domain Of Omp85 From Anabaena Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 17/276 (6%)
Query: 110 PAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACR 169
           PA +  +T   +    P++   + E RVL+SEVLVR + G+     +LET+    ++  +
Sbjct: 35  PAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLT--PELETQVYNVIR-TQ 91
Query: 170 ANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCE---GA 226
                T  ++QED++ I  +G+F +      DT  G+R+ F V+PN     +  +   G 
Sbjct: 92  PGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEIQANPGT 151
Query: 227 NV---LPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERG--LFGMVSGVEILSGGI 281
           NV   LP    ++ FR  YGK++N+R L E I  +   Y ++G  L  +V   ++   G+
Sbjct: 152 NVPSVLPQATADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQVSENGV 211
Query: 282 IRLQVAEAEVNNISIRFLDRK------TGEPTKGKTRPETILRQLTTKKGQVYSMLQGKR 335
           + LQVAE  V NIS+RF +++       G+P +G+T+   I R++  K GQV++    ++
Sbjct: 212 VTLQVAEGVVENISVRFRNKEGQDVNEQGQPIRGRTQDYIITREVELKPGQVFNRNTVQK 271
Query: 336 DVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVER 371
           D++ V   G+ EDV++   P  D  KV++++NVVER
Sbjct: 272 DLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVER 307
>pdb|2X8X|X Chain X, Structure Of The N-Terminal Domain Of Omp85 From The Thermophilic Cyanobacterium Thermosynechococcus Elongatus Length = 235 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query683
3mc9_A316 ALR2269 protein; polypeptide transport associated, 8e-47
2x8x_X235 TLR1789 protein, OMP85; chaperone, TOC75, protein 3e-45
2qdz_A554 TPSB transporter FHAC; beta barrel, potra domain, 3e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
3q6b_A189 Outer membrane protein assembly complex, YAET Pro; 4e-06
3efc_A395 OMP85, outer membrane protein assembly factor YAET 8e-04
>3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A Length = 316 Back     alignment and structure
 Score =  167 bits (424), Expect = 8e-47
 Identities = 87/285 (30%), Positives = 151/285 (52%), Gaps = 17/285 (5%)

Query: 104 QSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALT 163
            +    PA +  +T   +    P++   + E RVL+SEVLVR + G+     +LET+   
Sbjct: 29  TTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQL--TPELETQVYN 86

Query: 164 ALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVC 223
            ++  +     T  ++QED++ I  +G+F +      DT  G+R+ F V+PN     +  
Sbjct: 87  VIR-TQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEI 145

Query: 224 EG------ANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERG--LFGMVSGVE 275
           +        +VLP    ++ FR  YGK++N+R L E I  +   Y ++G  L  +V   +
Sbjct: 146 QANPGTNVPSVLPQATADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQ 205

Query: 276 ILSGGIIRLQVAEAEVNNISIRFLDRK------TGEPTKGKTRPETILRQLTTKKGQVYS 329
           +   G++ LQVAE  V NIS+RF +++       G+P +G+T+   I R++  K GQV++
Sbjct: 206 VSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQPIRGRTQDYIITREVELKPGQVFN 265

Query: 330 MLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSG 374
               ++D++ V   G+ EDV++   P  D  KV++++NVVER   
Sbjct: 266 RNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSLE 310
>2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} Length = 235 Back     alignment and structure
>2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A Length = 554 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A Length = 189 Back     alignment and structure
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} Length = 395 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query683
2qdz_A554 TPSB transporter FHAC; beta barrel, potra domain, 100.0
3mc9_A316 ALR2269 protein; polypeptide transport associated, 99.95
2x8x_X235 TLR1789 protein, OMP85; chaperone, TOC75, protein 99.95
2qdf_A335 OMP85, outer membrane protein assembly factor YAET 99.93
3efc_A395 OMP85, outer membrane protein assembly factor YAET 99.92
3efc_A395 OMP85, outer membrane protein assembly factor YAET 99.91
2qdf_A335 OMP85, outer membrane protein assembly factor YAET 99.83
3q6b_A189 Outer membrane protein assembly complex, YAET Pro; 99.81
3q6b_A189 Outer membrane protein assembly complex, YAET Pro; 99.47
2qdz_A554 TPSB transporter FHAC; beta barrel, potra domain, 99.21
2x8x_X235 TLR1789 protein, OMP85; chaperone, TOC75, protein 99.17
3mc9_A316 ALR2269 protein; polypeptide transport associated, 98.97
>2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A Back     alignment and structure
Probab=100.00  E-value=6.3e-39  Score=365.81  Aligned_cols=436  Identities=12%  Similarity=0.053  Sum_probs=316.4

Q ss_pred             Eee---CCceE--EEEEecccCCChhHHHHhhccCCCccccHHHHHHHHHHHHHHHHHCCc-eeEeec-EEEeeCcEEEE
Q 005677          212 VEP---NQEFH--GLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGL-FGMVSG-VEILSGGIIRL  284 (683)
Q Consensus       212 V~e---G~~~~--~I~~~G~~~~~~~~L~~~~~~~~G~~~~~~~l~~~~~~I~~~y~~~GY-~a~V~~-~~~~~~g~v~l  284 (683)
                      ..|   |++++  +|.|+|+..+++++|++.+..++|++|+.+.|++++++|+++|+++|| +++|.. .+.+.++.|+|
T Consensus        50 ~~e~~~g~~~~i~~I~~~G~~~~~~~~l~~~~~~~~G~~~~~~~l~~~~~~i~~~y~~~GY~~a~v~~~~~~~~~g~l~i  129 (554)
T 2qdz_A           50 KPDATSGHTVTVHAVDLDFGVEGRLFDPAPLVQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDGVLKL  129 (554)
T ss_dssp             ---CBCCCSSSSCCEEEECCSSSCCCSCSTTSTTSSSSCBCSTTHHHHHHHHHHHHHHTTCTTCEEEEEEEEEETTEEEE
T ss_pred             CccccCCceEEEEEEEEECCccCCHHHHHHHhHhhcCCCCCHHHHHHHHHHHHHHHHHcCceeeeEEcccccccCCEEEE
Confidence            468   99875  999999999998999899999999999999999999999999999999 788764 44556789999


Q ss_pred             EEEEEEEeeEEEEEcccCCCCCCCCCCCHHHHHH---HcccCCCCCCChHhHHHHHHHHHhCCCccceeeeeecCCCCCe
Q 005677          285 QVAEAEVNNISIRFLDRKTGEPTKGKTRPETILR---QLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGK  361 (683)
Q Consensus       285 ~V~e~~I~~I~I~~~~~~~Gn~~~~~t~~~vI~r---~l~~~~G~~~~~~~l~~~~~~L~~lg~F~~V~i~~~~~~~~g~  361 (683)
                      .|.|++|++|.|.      |+   .++++.+|++   .+++++|++|+.++|++++++|++++  ..|.+++.|+..++.
T Consensus       130 ~v~eG~i~~I~i~------G~---~~~~~~~l~~~~~~~~~~~G~~~n~~~le~~~~~L~~~~--~~v~~~~~p~~~~g~  198 (554)
T 2qdz_A          130 KVEWGRIKGWLID------GK---PLEGTRDRMMVFSAMPGWQDKVLNVFDIDQAIYNINNGG--KTGNITIVPADEYGY  198 (554)
T ss_dssp             EEECCEEEEEEET------TE---ECCSHHHHHHHHHHSTTCTTCBCCHHHHHHHHHHHCSSS--EEEEEEEEECSSTTE
T ss_pred             EEEeEEEEEEEEC------CC---CccchhhhhhhhhhccccCCCcCCHHHHHHHHHHHhcCc--hhceEEEecCCCCCe
Confidence            9999999999998      98   7889999999   99999999999999999999999999  778888888767899


Q ss_pred             EEEEEEEEEcCCeeEEEeeeecC--CCCCCCCcccEEEEEEEEccCCcCCcEEEEEEEecc-------eeeEEEEEEEcc
Q 005677          362 VDLIMNVVERPSGGFSAGGGISS--GITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQ-------IDSIFRINYTDP  432 (683)
Q Consensus       362 v~l~i~V~E~~~~~~~~g~gy~s--~~~~~~~~G~~~~~~l~~~NlfG~g~~l~~~~~~~~-------~~~~~~l~y~~P  432 (683)
                      ++|+|+|+|+++..+.++++...  ...   ..++.+.+.+.++|++|.|+++++++..+.       ..+.+.++|+.|
T Consensus       199 ~~l~v~v~e~~~~~~~~g~~~~g~g~~~---tg~~~~~~~~~~~n~~g~gd~l~~~~~~~~~~~~~~~~~~~~~~~y~~P  275 (554)
T 2qdz_A          199 SYLDLQLQRRALPRVSLGMDNSGPGTPE---NGRYKYNASVTANDLLGLNDTLGLYIGNRYYRDAGHDAERNYDLMYSVP  275 (554)
T ss_dssp             EEEEEEEEECCSCEEEEEEEECSCSSSC---SSCEEEEEEEEEECSSSSSCEEEEEEEEECCSCCSSCEEEEEEEEEEEE
T ss_pred             eEEEEEEeeCCcEEEEEEEcCCCCCCCC---ccceEEEEEEEeCCCCCCCcEEEEEEEecCccccCCCCceEEEEEEEEE
Confidence            99999999988866655554422  110   234789999999999999999999999985       678999999999


Q ss_pred             ccCCCCCceEEEEEEEeeecCCcccCCCCCCCCceEEEEEEEEEEEEeec--CCCeEEEEEEEEEEEEeecCCCC--c--
Q 005677          433 WIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPI--RPKWSGTVGLIFQHSGARDEKGN--P--  506 (683)
Q Consensus       433 ~~~~~~~~~s~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~gl~~~~~~~~~~~~~--~--  506 (683)
                      |..     +.+.+++.+++....+ .+. .....|...+.++++.+++|+  ...+++++++++.+.+..+....  .  
T Consensus       276 ~~~-----~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (554)
T 2qdz_A          276 LGR-----TRLDLQTGYSTYRNLL-KTR-YGQYQSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLAGTRLDV  348 (554)
T ss_dssp             ETT-----EEEEEEEEEEEEECCC-SSS-SCCCCCEEEEEEEEEEEEEEEECCSSEEEEEEEEEEEEEEEEECCTTSCCC
T ss_pred             Eec-----CeEEEEEEEeEEEEEc-cCC-cceEEEEeeEEEEEEEEEEEEEECCCeEEEEEEEEEEEEeeeeeCCcCccc
Confidence            873     2444444434322211 110 122356777888899999998  44666666666666554321111  0  


Q ss_pred             eeccccCCceeeccccCCc--eeEEEeeEEEccCCCCCCceeEEeeeeccCcCCCcceEEEEEEEEEEEEEe---cCc-e
Q 005677          507 IIKDFYSSPLTASGKTNDE--MLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEI---GPA-R  580 (683)
Q Consensus       507 ~~~~~~~~~l~~~~d~rD~--~~~P~~G~~~~~~G~~G~~~~~~~~e~~~~~~~~~~~f~k~~~~~~~y~~l---~~~-~  580 (683)
                      .......+.++++|++++.  .++++.+...   |   .. +............++..|.|+.+++++|+++   ... .
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---G---~~-~~a~~~~~~~~~~~~~~f~k~~~~~~~~~~~~~~~~~~~  421 (554)
T 2qdz_A          349 SSKHYSDVTVGMQYSTQRGANAYFGDLSFTR---G---VG-VNNGKYAAYDERGPQGNVSRFNGSLAWTRYMALAGQPIQ  421 (554)
T ss_dssp             EEEEEEEEEEEEEEEEECSSEEEEEEEEEEE---C---CC-C--------------CCCEEEEEEEEEEEEEEETTEEEE
T ss_pred             cCceEEEEEEEEEEEEEecCeEEEEEEEEEe---c---CC-CCCCcCcccccCCCcceEEEEEEEEEEEEEccccCCCEE
Confidence            1112334556777887765  5556544332   1   10 0100000000112467999999999999997   333 5


Q ss_pred             EEEEEeeeeeccCCCccCccccCCCCccccccCCCccccceEEEEeEEEEEeccc------CCce------eEEEecCCC
Q 005677          581 LLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMVC------DDYQ------ISVLYGSKS  648 (683)
Q Consensus       581 l~lr~~~G~~~g~lP~~erF~lGG~~svRGy~~~~lgpG~~~~~~s~ElR~pl~~------~~~g------~g~~~g~~~  648 (683)
                      +.+++.+|++.+++|++|+|++||.++||||++++++||+.++.+++|||||+..      ..+.      +|.+|+...
T Consensus       422 ~~~~~~~q~~~~~lp~~e~f~lGG~~sVRGy~~~~l~pGd~g~~~~~El~~~~~~~~~~~~~~~~~~~F~D~G~v~~~~~  501 (554)
T 2qdz_A          422 WASQLGFQYSRQQLLNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQFSLLGKQASVAPFVGADVGALKSNHP  501 (554)
T ss_dssp             EEEEEEEEECSSCSSSSEECCSCCCCCCTTCCCCCSCCSSCSSCCEESEEEEEEEEEEECCSSCEEEEEEEEEEEECSSS
T ss_pred             EEEEEEeEecCCCCCcHHhEecCCCCeECCcccccccCCCccEEEEEEEEeeccccccCccceEEEEEEEEEEEEecCCC
Confidence            7777888888778999999999999999999999998899999999999999711      1222      677776543


Q ss_pred             Ccc--cccccccceeeecccccccccccc
Q 005677          649 ENI--LKLYHCMFMMLKSACNCASHELAE  675 (683)
Q Consensus       649 ~~~--~k~~~~~~~~~~~~~~~~~~~~~~  675 (683)
                      +..  .....+++++|.++...+++|+|-
T Consensus       502 ~~~~~~~~g~G~Glr~~~~~~~l~l~~a~  530 (554)
T 2qdz_A          502 DARTIRMAGLAAGVRFDLPYARMSFTYSK  530 (554)
T ss_dssp             SCCEEEEEEEEEEEEECCSSEEEEEEEEE
T ss_pred             CCCCCEEEEEEEEEEEecCcEEEEEEEEe
Confidence            311  222355667776655555555553
>3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A Back     alignment and structure
>2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} Back     alignment and structure
>2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A Back     alignment and structure
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} Back     alignment and structure
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane, ME protein; 3.30A {Escherichia coli} Back     alignment and structure
>2qdf_A OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A Back     alignment and structure
>3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A Back     alignment and structure
>3q6b_A Outer membrane protein assembly complex, YAET Pro; potra fold, insertion of outer membrane proteins, protein BI; 1.50A {Escherichia coli} PDB: 3og5_A Back     alignment and structure
>2qdz_A TPSB transporter FHAC; beta barrel, potra domain, membrane, protein transport; 3.15A {Bordetella pertussis} PDB: 3njt_A Back     alignment and structure
>2x8x_X TLR1789 protein, OMP85; chaperone, TOC75, protein targeting; 1.97A {Thermosynechococcus elongatus} Back     alignment and structure
>3mc9_A ALR2269 protein; polypeptide transport associated, potra, outer bacterial MEM protein membrane transport, beta barrel biogenesis, membran; 2.20A {Nostoc SP} PDB: 3mc8_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00