Citrus Sinensis ID: 005805

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670------
MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRGRPQEQPTSSLPHSFISFRLVLKILLVASIAVTWQYYFG
ccEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHccEEEEEEEEEccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEcccccccccccccccHHccccccccccccccccccccccccEEEEEEEEEcccccccccEEEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccEEEEccccccEEEEEcccccccEEEEcccccccccccccccccccccccccccccccEEEEEEEEccccccccEEEEEccccccccccccccccccccEEEEEEEEEccEEEEEEEEEEEEEccccccccccccEEEEccccccccccEEEEEEEEccccEEEEEEEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHEEEEccc
ccEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEEEEccccccccccccccccHHHHHHHHHccccEEEEEEccccccHHHccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHEEEHcccccccccccccEEEccccccEEEEcccccccccccccHHHHHcccccccHHHHHcccccEEcccEcEEEEEEEEcccccccccEEEEEEEEEEEEEcccHccccccccccccccccccHHHHcccccccccccccccEEEEEcccccccccccccccHHHHcccccccccccccccEEEccccccEEEEEcccccccccccccccHHHccccccccEEEEcccccccccccccEEEEEEEEcccccccEEEEEEEcccccccccccccccccccEEEEEEEEccEEEEEEEEEEEEEEcccccccccccEEEEEccccccccccEEEEEEEEccccEEEEEEEEEcHHHEEEcccccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcc
MAILLSRRSNLLAVVVLLLCQLFLYATvsssgsvlkqgggeefseelllkpfpdrkvlahfhfqsraphssshgrhhhlFPKAIAQLVKKFRVKEMELSFTQGRWRYeqwggfdplssnnakppgvelwavfdvpqSLVDVYWRNLTHTLSGLFCASinflessttysapeltfkpsfgnlrygtlpreavctenltpwlkllpcrdkaglsalmdrpsiyrgfyhsqrlrltssesgsdevdsgigldqTLTVVlqpsswrtgktysvetniqpswsissifgrnipgkcviakssnvylqldnglvgELKNLERENAKYVANTfesegfqsnhafkisvtpdkvfeevdnlhgksTSVIYGFSvekysdsqpfdlgltwkipvvwscqqaplhasrflmgsgnergaiaisleptesseglptshiidgrcelrvdifqVVPWYIKVYFHTLQVFVDKQPRAMADVVDkirvspskdkvspgVMEMILklpcgsksaafslefdkgflhideyppdanqgfdipsalisfpsfnarmnfsedeflnnspilskfqetspvlsytevlliplttpdfsmpynvITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKlrgrpqeqptsslphsfiSFRLVLKILLVASIAVTWQYYFG
maillsrrSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLqpsswrtgktysvetniqpswsissifgRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTfesegfqsnhAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISleptesseglptSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMAdvvdkirvspskdkvspgVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILrsraghkagwiSQLLSRLSAKLRGRPqeqptsslphsfiSFRLVLKILLVASIAVTWQYYFG
MAIllsrrsnllavvvlllcqlflYATVSSSGSVLKQgggeefseelllKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTssesgsdevdsgIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRGRPQEQPTSSLPHSFISFRLVLKILLVASIAVTWQYYFG
***LLSRRSNLLAVVVLLLCQLFLYATVSSSG*V***********ELLLKPFPDRKVLAHFHF************HHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR****************IGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLM*************************HIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIR**********GVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLS*******************HSFISFRLVLKILLVASIAVTWQYYF*
*******RSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPH**SHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPL****AKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWR********TNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIP***SCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNAR************PILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVD*****************SQLLSR**************************VLKILLVASIAVTWQYYFG
MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQS***********HHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRL***********SGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEP********TSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAK************LPHSFISFRLVLKILLVASIAVTWQYYFG
*AILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRT*KTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNA************SPILSK*QETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRG*************FISFRLVLKILLVASIAVTWQYYFG
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAILLSRRSNLLAVVVLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRGRPQEQPTSSLPHSFISFRLVLKILLVASIAVTWQYYFG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query676 2.2.26 [Sep-21-2011]
Q8BXQ2582 GPI transamidase componen yes no 0.791 0.919 0.326 2e-77
Q969N2578 GPI transamidase componen yes no 0.794 0.929 0.325 5e-77
O94380545 GPI transamidase componen yes no 0.781 0.968 0.285 1e-51
P38875610 GPI transamidase componen yes no 0.786 0.872 0.275 2e-49
>sp|Q8BXQ2|PIGT_MOUSE GPI transamidase component PIG-T OS=Mus musculus GN=Pigt PE=1 SV=2 Back     alignment and function desciption
 Score =  291 bits (744), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 203/622 (32%), Positives = 303/622 (48%), Gaps = 87/622 (13%)

Query: 37  QGGGEEFSEELLLKPFPDRKVLAHFHFQSR--APHSSSHGRHHHLFPKAIAQLVKKFRVK 94
           +G  +   EEL++ P P   V A F F++R  +        H+ LFPKA+ QL+ K+ ++
Sbjct: 28  EGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLR 87

Query: 95  EMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLF 154
           E+ LSFTQG WR   WG   P       P G ELW  F    + VD  WR L++ LSG+F
Sbjct: 88  ELHLSFTQGFWRTRYWG--PPFLQ---APSGAELWVWFQDTVTDVDKSWRELSNVLSGIF 142

Query: 155 CASINFLESSTTYSAPELTFKP-SFGN------LRYGTLPREAVCTENLTPWLKLLPCRD 207
           CAS+NF++++ T + P  +FKP    N      LRY  LPRE VCTENLTPW KLLPC  
Sbjct: 143 CASLNFIDATNTVT-PTASFKPLGLANDTDDYFLRYAVLPREVVCTENLTPWKKLLPCSS 201

Query: 208 KAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGKTY 267
           KAGLS L+    ++   YHSQ + +      +        L QTL+VV    ++ TG+  
Sbjct: 202 KAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFD--AFITGQG- 258

Query: 268 SVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFE 327
                 +  WS+  +F R +   C +A  S VY+ +                        
Sbjct: 259 ------KKDWSLFRMFSRTLTEACPLASQSLVYVDI------------------------ 288

Query: 328 SEGF-QSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVV 386
             G+ Q N   ++S  P   +++V     K+ +V   F     ++S+  ++ L WK P  
Sbjct: 289 -TGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPD 347

Query: 387 WSCQQAP-LHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPW 445
                 P LHA R++ G G ++G ++  L  +      P            V +  VVPW
Sbjct: 348 NEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFP------------VLLLDVVPW 395

Query: 446 YIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEF 505
           Y+++Y HTL +      +   +    I   P++D+  P ++EM+++LP  S +   S++F
Sbjct: 396 YLRLYVHTLTI----TSKGKENKPSYIHYQPAQDRQQPHLLEMLIQLPANSVTKV-SIQF 450

Query: 506 DKGFLHIDEYPPDANQGFDIPSALIS--FPSFNARMNFSEDEFLNNSPILSKFQETSP-- 561
           ++  L   EY PD N GF +  +++S   PS  A      +     SP+ +     S   
Sbjct: 451 ERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWE----GSPLFNTLFPVSDGS 506

Query: 562 ---VLSYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRA 618
              V  YTE LL+ L TPDFSMPYNVI +TCTV A+ +GS  N+L R    EE       
Sbjct: 507 SYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEE------- 559

Query: 619 GHKAGWISQLLSRLSAKLRGRP 640
             K+G +++ L+ L  + RG P
Sbjct: 560 -PKSGGLAKRLANLIRRARGVP 580
Component of the GPI transamidase complex. Essential for transfer of GPI to proteins, particularly for formation of carbonyl intermediates.
Mus musculus (taxid: 10090)
>sp|Q969N2|PIGT_HUMAN GPI transamidase component PIG-T OS=Homo sapiens GN=PIGT PE=1 SV=1 Back     alignment and function description
>sp|O94380|GPI16_SCHPO GPI transamidase component PIG-T homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi16 PE=3 SV=1 Back     alignment and function description
>sp|P38875|GPI16_YEAST GPI transamidase component GPI16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI16 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query676
225436886665 PREDICTED: GPI transamidase component PI 0.927 0.942 0.686 0.0
225436888664 PREDICTED: GPI transamidase component PI 0.926 0.942 0.689 0.0
255560115672 GPI-anchor transamidase, putative [Ricin 0.955 0.961 0.652 0.0
297829264647 GPI transamidase component Gpi16 subunit 0.924 0.965 0.650 0.0
356559118670 PREDICTED: GPI transamidase component PI 0.917 0.925 0.649 0.0
449525439669 PREDICTED: GPI transamidase component PI 0.973 0.983 0.643 0.0
356506668662 PREDICTED: GPI transamidase component PI 0.912 0.932 0.655 0.0
18397852644 GPI transamidase component Gpi16 subunit 0.924 0.970 0.645 0.0
30680143643 GPI transamidase component Gpi16 subunit 0.923 0.970 0.644 0.0
6642651639 unknown protein [Arabidopsis thaliana] 0.917 0.970 0.642 0.0
>gi|225436886|ref|XP_002273696.1| PREDICTED: GPI transamidase component PIG-T-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/629 (68%), Positives = 518/629 (82%), Gaps = 2/629 (0%)

Query: 50  KPFPDRKVLAHFHFQSRAPHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQ 109
           KP  DRKVLAHFHF+S+AP + ++G HH LFPKA+ QLV+KFR++EMELSFTQGRW YE+
Sbjct: 37  KPLADRKVLAHFHFESKAPPTRTYGHHHRLFPKALYQLVQKFRIREMELSFTQGRWNYER 96

Query: 110 WGGFDPLSSNNAKPPGVELWAVFDVPQSLVDVYWRNLTHTLSGLFCASINFLESSTTYSA 169
           WGGFDP+SS+NAKPPGVELWAVFDVP  LVD  W+NLTHTLSGLFCASINFLESST YSA
Sbjct: 97  WGGFDPISSSNAKPPGVELWAVFDVPHDLVDASWKNLTHTLSGLFCASINFLESSTAYSA 156

Query: 170 PELTFKPSFGNLRYGTLPREAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQR 229
           P+  F+P  G+LRYG+LPREAVCTENLTPWLKLLPCRDKAGL+ALMDRPSIYRGFYHSQR
Sbjct: 157 PDWGFQPFSGSLRYGSLPREAVCTENLTPWLKLLPCRDKAGLAALMDRPSIYRGFYHSQR 216

Query: 230 LRLTSSESGSDEVDSGIGLDQTLTVVLQPS-SWRTGKTYSVETNIQPSWSISSIFGRNIP 288
           LRL+S+E GS E++SGI LDQTLTVVLQP+ S R   TYS ++ +QPSWS+SSIFGR + 
Sbjct: 217 LRLSSTEFGSTELESGIALDQTLTVVLQPTTSQRASMTYSSDSVLQPSWSLSSIFGRKVS 276

Query: 289 GKCVIAKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFE 348
           G+CV+AKSSNVY+Q++ GLV ELKNL  E+    A     E   +N  F++S+ P++V +
Sbjct: 277 GRCVLAKSSNVYVQVERGLVSELKNLHAEDEGSGAGNVTFEKTWNNPGFELSIAPNRVIK 336

Query: 349 EVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKIPVVWSCQQAPLHASRFLMGSGNERG 408
           EV+ LH +++ V+Y + ++ YS+S+PFDLG TWK PVVWS  QAPLHASRFLMGSGNERG
Sbjct: 337 EVNILHDETSIVLYEYLIDNYSNSEPFDLGFTWKFPVVWSSPQAPLHASRFLMGSGNERG 396

Query: 409 AIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADV 468
           AIAISL+ TE S+GL  +  I+  C LR ++FQVVPWY++VYFHTLQVFVD +P+++ D 
Sbjct: 397 AIAISLKATEPSDGLWVADTIENSCMLRFNVFQVVPWYVRVYFHTLQVFVDGKPQSVTDF 456

Query: 469 VDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSA 528
           ++++R+SPS+DKVSPGVMEM LKLPC  KS   +LEFDKGFLHIDEYPPDANQGFDIPSA
Sbjct: 457 IERMRISPSEDKVSPGVMEMALKLPCCVKSVTLTLEFDKGFLHIDEYPPDANQGFDIPSA 516

Query: 529 LISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITIT 588
           +ISFP F+A M+F +D+ LN SP+LSKFQE SPVL YTEVLL+PLTTPDFSMPYNVITIT
Sbjct: 517 VISFPDFHASMHFLKDDSLNKSPLLSKFQEKSPVLCYTEVLLVPLTTPDFSMPYNVITIT 576

Query: 589 CTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLRGRPQE-QPTSS 647
           CTVFALYFGSLLNVLRRRV EEER L+ +   K G + QLLS+L AKLRG+  E   T S
Sbjct: 577 CTVFALYFGSLLNVLRRRVGEEERFLKRKDSKKTGRLGQLLSKLFAKLRGKSWEPTQTQS 636

Query: 648 LPHSFISFRLVLKILLVASIAVTWQYYFG 676
              S IS +L+ K++LVA IA  WQYY G
Sbjct: 637 ASSSLISSKLIFKVILVAGIAAGWQYYSG 665

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225436888|ref|XP_002273727.1| PREDICTED: GPI transamidase component PIG-T-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255560115|ref|XP_002521075.1| GPI-anchor transamidase, putative [Ricinus communis] gi|223539644|gb|EEF41226.1| GPI-anchor transamidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297829264|ref|XP_002882514.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] gi|297328354|gb|EFH58773.1| GPI transamidase component Gpi16 subunit family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356559118|ref|XP_003547848.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] Back     alignment and taxonomy information
>gi|449525439|ref|XP_004169725.1| PREDICTED: GPI transamidase component PIG-T-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356506668|ref|XP_003522098.1| PREDICTED: GPI transamidase component PIG-T-like [Glycine max] Back     alignment and taxonomy information
>gi|18397852|ref|NP_566299.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|15292901|gb|AAK92821.1| unknown protein [Arabidopsis thaliana] gi|22136838|gb|AAM91763.1| unknown protein [Arabidopsis thaliana] gi|332640982|gb|AEE74503.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30680143|ref|NP_850530.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] gi|332640983|gb|AEE74504.1| GPI transamidase component Gpi16 subunit-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|6642651|gb|AAF20232.1|AC012395_19 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query676
TAIR|locus:2098485644 AT3G07140 "AT3G07140" [Arabido 0.579 0.608 0.614 1.3e-130
UNIPROTKB|E2RDR1579 PIGT "Uncharacterized protein" 0.352 0.411 0.389 8.3e-76
MGI|MGI:1926178582 Pigt "phosphatidylinositol gly 0.368 0.427 0.386 1.7e-75
RGD|1307156580 Pigt "phosphatidylinositol gly 0.368 0.429 0.386 1.7e-75
UNIPROTKB|Q969N2578 PIGT "GPI transamidase compone 0.352 0.411 0.393 2.5e-75
UNIPROTKB|F1P2G6574 PIGT "Uncharacterized protein" 0.353 0.416 0.387 3e-75
UNIPROTKB|F1N4W0578 PIGT "Uncharacterized protein" 0.352 0.411 0.393 3.5e-74
UNIPROTKB|F1SD35578 LOC100626091 "Uncharacterized 0.352 0.411 0.385 1.4e-73
ZFIN|ZDB-GENE-090313-46634 pigt "phosphatidylinositol gly 0.331 0.353 0.422 3.4e-73
FB|FBgn0030035633 CG11190 [Drosophila melanogast 0.384 0.410 0.326 5.4e-56
TAIR|locus:2098485 AT3G07140 "AT3G07140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1281 (456.0 bits), Expect = 1.3e-130, P = 1.3e-130
 Identities = 253/412 (61%), Positives = 319/412 (77%)

Query:   265 KTYSVETNIQPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVG-ELKNLERENAKYVA 323
             +T SVE+N+QPSWS+SS+FGR + G+CV+AKSSNVYLQL+ GL+G E KN++ E      
Sbjct:   247 ETTSVESNMQPSWSLSSLFGRQVVGRCVLAKSSNVYLQLE-GLLGYESKNVDTE------ 299

Query:   324 NTFESEGFQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKI 383
                E+     N  F++S+ P++V  E       S S ++ F ++K SDS+PFDLGLTWK 
Sbjct:   300 --IEAHQLWKNAEFELSLKPERVIRE-------SCSFLFIFDIDKSSDSEPFDLGLTWKR 350

Query:   384 PVVWSCQQAPLHASRFLMGSGNERGAIAISLEPTESSEGLPTSHIIDGRCELRVDIFQVV 443
             P  WSCQQAPLH+SRFLMGSGNERGAIAI L+ TES E L    + +G+C ++ +IFQ+ 
Sbjct:   351 PSKWSCQQAPLHSSRFLMGSGNERGAIAILLKATESQEKLSGRDLTNGQCTIKANIFQIF 410

Query:   444 PWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMILKLPCGSKSAAFSL 503
             PWYIKVY+HTLQ+FVD+Q +  ++V+ KI VSPS DKVS G+MEM+L+LPC  KS A S+
Sbjct:   411 PWYIKVYYHTLQIFVDQQQKTDSEVLKKINVSPSTDKVSSGMMEMMLELPCEVKSVAISI 470

Query:   504 EFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVL 563
             E+DKGFLHIDEYPPDANQGFDIPSALISFP  +A ++F E+  L+NSP+LS  +E S V 
Sbjct:   471 EYDKGFLHIDEYPPDANQGFDIPSALISFPDHHASLDFQEE--LSNSPLLSSLKEKSLVR 528

Query:   564 SYTEVLLIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAG 623
             SYTEVLL+PLTTPDFSMPYNVITITCT+FALYFGSLLNVLRRR+ EEER L+S+AG K G
Sbjct:   529 SYTEVLLVPLTTPDFSMPYNVITITCTIFALYFGSLLNVLRRRIGEEERFLKSQAGKKTG 588

Query:   624 WISQLLSRLSAKLRGRPQEQPTSS-LPHSFISFRLVLKILLVASIAVTWQYY 674
              + QLLSR++AK+RGRP E P+SS    S +S +L+LKI+LVA  A  WQY+
Sbjct:   589 GLKQLLSRITAKIRGRPIEAPSSSEAESSVLSSKLILKIILVAGAAAAWQYF 640
GO:0003923 "GPI-anchor transamidase activity" evidence=ISS
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0016021 "integral to membrane" evidence=IEA
GO:0042765 "GPI-anchor transamidase complex" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0042732 "D-xylose metabolic process" evidence=RCA
UNIPROTKB|E2RDR1 PIGT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1926178 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307156 Pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q969N2 PIGT "GPI transamidase component PIG-T" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2G6 PIGT "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N4W0 PIGT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SD35 LOC100626091 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090313-46 pigt "phosphatidylinositol glycan anchor biosynthesis, class T" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0030035 CG11190 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query676
pfam04113559 pfam04113, Gpi16, Gpi16 subunit, GPI transamidase 0.0
>gnl|CDD|217904 pfam04113, Gpi16, Gpi16 subunit, GPI transamidase component Back     alignment and domain information 
 Score =  543 bits (1401), Expect = 0.0
 Identities = 222/645 (34%), Positives = 313/645 (48%), Gaps = 109/645 (16%)

Query: 16  VLLLCQLFLYATVSSSGSVLKQGGGEEFSEELLLKPFPDRKVLAHFHFQS-RAPHSSSHG 74
           +LL   LFL A  SSSG        E++ E L L+P PD K+LA F+F+S   P SS   
Sbjct: 1   LLLFAYLFLVALASSSGLS------EDYHESLTLRPLPDSKLLASFNFRSENEPSSSFEE 54

Query: 75  RHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVFDV 134
           RH  LFP+++ Q+++    +E+ L FTQGRW  E WG   P +   +   GVE+WA  + 
Sbjct: 55  RHFRLFPRSLGQILQHANTRELHLRFTQGRWDAESWG-SRPWNGARSGGTGVEVWAWIEA 113

Query: 135 PQS-LVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSFGN------LRYGTLP 187
            Q    D  W+ LT+ LSGLFCAS+NF++S+ T   P  +F+P+         L YG+LP
Sbjct: 114 DQDEEADEKWKTLTNALSGLFCASLNFIDSTRTTR-PVFSFQPNGDGSNSNLHLLYGSLP 172

Query: 188 REAVCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIG 247
            E VCTENLTP+LKLLPC+ KAG+S+L+D   ++   + S  + +          +  + 
Sbjct: 173 GEVVCTENLTPFLKLLPCKGKAGISSLLDGHKLFDSSWQSMAIDVRPVCDDDQG-ECKLQ 231

Query: 248 LDQTLTVVL--------------QPSSWRTGKTYSVETNIQPSWSISSIFGRNIPGKCVI 293
           ++QT+ VVL              Q         + +    + SWS+S +FGR + G C +
Sbjct: 232 MEQTVDVVLDVERSKRPRLKPDTQKPCHSDDTCFPLGDTSEVSWSLSELFGRPLKGSCPL 291

Query: 294 AKSSNVYLQLDNGLVGELKNLERENAKYVANTFESEGFQSNHAFKISVTPDKVFEEVDNL 353
           A SS V LQ+                                    SV       EV   
Sbjct: 292 ADSSKVCLQVP--------------------------------ESRSVNVSPGAREVKGT 319

Query: 354 HGKSTSVIYGFSVEKYSDSQPFDLGLTWK-IPVVWSCQQAPLHASRFLMGSGNERGAIAI 412
            G   +    F ++   +S PFDL L W     V +  Q  L A R L G G ERG + I
Sbjct: 320 DGFIRT----FDLD---NSTPFDLKLPWPESTTVVTSDQPVLKAERSLTGHGQERGGLRI 372

Query: 413 SLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKI 472
                 SS    T   I          F+++PW+++VY HTLQ+ +D Q +   D+++KI
Sbjct: 373 IFTNPSSS----TVEFI---------YFEILPWFVRVYLHTLQIKIDGQQKPTKDLIEKI 419

Query: 473 RVSPSKDKVSPGVMEMILKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISF 532
              PS D+  P  +E+ + LP  S +   + +F+K  L   EYPPDAN+GFDIP+A+I+ 
Sbjct: 420 YYRPSVDRERPTQLELKMSLPPAS-TVTLTYDFEKSILRYTEYPPDANRGFDIPAAVITI 478

Query: 533 PSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVLLIPLTTPDFSMPYNVITITCTVF 592
              N                      TS     T  LL+PL TPDFSMPYNVI +T TV 
Sbjct: 479 LDEN---------------------RTSLYRIRTTSLLLPLPTPDFSMPYNVIILTSTVI 517

Query: 593 ALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKLR 637
           AL FGS+ N+L RR    E      A     W+ +L  ++  K+R
Sbjct: 518 ALAFGSIFNLLTRRFVTAEEAPVLGAQ---TWLGRLKEKIVRKIR 559

GPI (glycosyl phosphatidyl inositol) transamidase is a multi-protein complex. Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase that adds glycosylphosphatidylinositols (GPIs) to newly synthesised proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif. Length = 559

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 676
PF04113564 Gpi16: Gpi16 subunit, GPI transamidase component; 100.0
KOG2407575 consensus GPI transamidase complex, GPI16/PIG-T co 100.0
>PF04113 Gpi16: Gpi16 subunit, GPI transamidase component; InterPro: IPR007245 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex Back     alignment and domain information 
Probab=100.00  E-value=1.1e-158  Score=1332.57  Aligned_cols=519  Identities=45%  Similarity=0.821  Sum_probs=456.9

Q ss_pred             CCCCceeeeEEeeeCCCCcEEEEEEEEEc-cCCCCCCCcccccccHHHHHHhHhcCeeEEEEEeeeeeccCcccCCCCCC
Q 005805           38 GGGEEFSEELLLKPFPDRKVLAHFHFQSR-APHSSSHGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPL  116 (676)
Q Consensus        38 ~~~e~f~E~L~L~PLp~~~lla~F~F~~~-~~~~~~~~~h~~lFPrsl~qil~~~~v~ELhLsfTqGrW~~~~WG~p~p~  116 (676)
                      ..+|.|+|+|+|||||+|+++++|+|+++ ...+.+..+||++|||+|+||+++++++||||||||||||+++||. +|+
T Consensus        17 ~~~~~f~E~L~l~PL~~~~ll~~F~F~~~~~~~~~~~~~h~~~fP~~i~~il~~~~~~elhl~fTqG~W~~~~WG~-~p~   95 (564)
T PF04113_consen   17 SASESFTEELTLKPLPDGKLLASFNFTTESSSSNNDEYQHYTLFPRSIGQILQKYNVRELHLSFTQGRWDYESWGY-PPF   95 (564)
T ss_pred             cccCceeeEEEEEECCCCCEEEEEEEEeccCccccccccccccCCHHHHHHHHhcCceEEEEEEeeccCcccccCC-CCc
Confidence            45889999999999999999999999994 3345678899999999999999999999999999999999999998 889


Q ss_pred             CCCCCCCCceEEEEEEeCCc-hhHHHHHHHHHHHhhhhhhhccccccCCceeecCcccccCCC-----ceeEeecCCCCc
Q 005805          117 SSNNAKPPGVELWAVFDVPQ-SLVDVYWRNLTHTLSGLFCASINFLESSTTYSAPELTFKPSF-----GNLRYGTLPREA  190 (676)
Q Consensus       117 ~~~~~~~~GvELwA~~~~~~-~~~d~~W~~LtnaLSGLFCASLNfidst~t~~~P~~sf~p~~-----~~l~~a~LP~E~  190 (676)
                      +|.+++|+||||||||+++. +++|++|++|||+|||||||||||||+++|++ |.++|+|.+     .+++||+||+|+
T Consensus        96 ~g~~~~~~G~elwA~~~~~~~~~~d~~W~~Lt~~LsGlfCASLn~id~~~t~~-P~~~~~~~~~~~~~~~~~~~~LP~E~  174 (564)
T PF04113_consen   96 DGFKSGPTGAELWAWFEAPSDEEADERWKGLTNALSGLFCASLNFIDSTNTTS-PVFSFQPEGNGNNSLFLRYASLPREP  174 (564)
T ss_pred             cccccCCcceEEEEEecCCcchHHHHHHHHHHHHHHHHhhhcccccCCCcEEC-cceeeccCCCCCCcceEEeeeCCCCC
Confidence            99999999999999999974 55999999999999999999999999999887 999999987     489999999999


Q ss_pred             ccccCcchhhhccCCCCCcccccccCCCccccccceeeeEEEEeccCCCCCCcceEEEEEEEEEEEcCCCccCCc-----
Q 005805          191 VCTENLTPWLKLLPCRDKAGLSALMDRPSIYRGFYHSQRLRLTSSESGSDEVDSGIGLDQTLTVVLQPSSWRTGK-----  265 (676)
Q Consensus       191 VCTENLTP~lKLLPCk~kaGLasLLd~~~lf~s~yhS~~i~v~~~c~~~~~~~~~l~l~qtv~~Vld~~~~~~~~-----  265 (676)
                      |||||||||+||||||+|+||++|||||++||+.||||+|||++.|++..|. |+++|+|++++|+|+.++++++     
T Consensus       175 vCTENLTP~~KLLPc~~~~GLasLL~~~~lf~s~yhS~~i~v~~~c~~~~~~-~~~~l~~~~~~V~d~~~~~~~~p~~~~  253 (564)
T PF04113_consen  175 VCTENLTPWLKLLPCKGKAGLASLLDPHKLFDSNYHSLSIDVRTICDDSTCS-CSLELEQTLTVVLDPPRSLRRRPVPGD  253 (564)
T ss_pred             cccccchhhHHhCCCCccCCHHHHcCchhhhcCCceeEEEEEEecCCCCCCc-eEEEEEeEEEEEECchhhcCCCCCccc
Confidence            9999999999999999999999999999999999999999999999988777 9999999999999999887655     


Q ss_pred             --------------ccCCCCCCCCCeeeecccCCCCCCCCCCcc-CceEEEEcCCCccccccchhccccccccccccccc
Q 005805          266 --------------TYSVETNIQPSWSISSIFGRNIPGKCVIAK-SSNVYLQLDNGLVGELKNLERENAKYVANTFESEG  330 (676)
Q Consensus       266 --------------~~~~~~~~~~~wSL~~lFgr~i~g~CplA~-sS~V~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  330 (676)
                                    .++.++..+.+|||++||||+++|+||+|+ +|+|||+++.+.                       
T Consensus       254 ~l~cd~~k~~~~~~c~pl~~~~~~dWSl~~lFGr~i~g~CplA~~sS~V~v~v~~~~-----------------------  310 (564)
T PF04113_consen  254 ELRCDTSKPYDAWQCFPLGDSSEQDWSLSSLFGRKIPGSCPLADESSKVYVDVPEEW-----------------------  310 (564)
T ss_pred             ccccccCCCcccceeeecCCCCCCCeeHHHHhCCCCCCCCccCCCCceEEEecCCce-----------------------
Confidence                          123345667899999999999999999999 999999987532                       


Q ss_pred             cccCcceeeecCCCcceeeeccccCCCCceEEeeeecCCCCCCcceeeeeccc-ccccccCCCceEEEEEeecccccccc
Q 005805          331 FQSNHAFKISVTPDKVFEEVDNLHGKSTSVIYGFSVEKYSDSQPFDLGLTWKI-PVVWSCQQAPLHASRFLMGSGNERGA  409 (676)
Q Consensus       331 ~~~~~~f~~~~~p~~v~~e~~~~~~~~~~~~~~ydl~~~s~~~~~dl~~~~~~-p~~~~~~~ppl~a~R~ltG~GqerGg  409 (676)
                             ++...+..  .+.    .......++|++.+.   .++||.++|+. +..+..++|||||+|+++||||+|||
T Consensus       311 -------~v~~~~~~--~~~----~~~~~~~~~y~l~~~---~~~dl~l~~~~~~~~~~~~~ppL~a~R~LtG~GQerGg  374 (564)
T PF04113_consen  311 -------SVSPEPGA--DEQ----KTSSDNLNCYDLSES---SPFDLYLPWKNSSIVWSLPPPPLYASRSLTGYGQERGG  374 (564)
T ss_pred             -------EEeccCCc--eEE----eccCCcEEEEEcCCC---CCCCeEeeccCCCccccCCCCceEEEEEEcCCCcCCCe
Confidence                   12222111  111    123456789999864   58999999975 33456689999999999999999999


Q ss_pred             EEEEEecCCCCCCCCCccccCCCceeEEEEEEeecceeeEeeeEEEEEEcCCcccccccceeEEecCCCCCCCCceEEEE
Q 005805          410 IAISLEPTESSEGLPTSHIIDGRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSKDKVSPGVMEMI  489 (676)
Q Consensus       410 l~~~i~N~~~~~~~~~~~~~~~~~~v~v~y~E~lPWf~r~ylHTL~v~~~g~~~~~~~~i~~~~y~Pa~dR~rP~~LEl~  489 (676)
                      |+++|+|++             +.+++|+|||+||||||||+|||++++++......++|+.++|+||+||+||++||+.
T Consensus       375 l~~~i~N~~-------------~~~v~i~y~E~lPWf~r~YlhTL~v~~~~~~~~~~~~i~~~~y~Pa~dr~rp~~lE~~  441 (564)
T PF04113_consen  375 LRTVITNPS-------------DTPVEIVYFESLPWFMRPYLHTLKVEVDGQPKPESDVIKSIYYSPAKDRKRPTHLELV  441 (564)
T ss_pred             EEEEEECCC-------------CCceEEEEEEeccceeeeeEEEEEEEEecCccccccceeeEeeccccccCCCceEEEE
Confidence            999999997             5699999999999999999999999999777777889999999999999999999999


Q ss_pred             EEecCCCeEEEEEEeecccceecccCCCCCCCCcccCcceeeeccccccccCcccccccCCcccccCCCCCCeEEecccc
Q 005805          490 LKLPCGSKSAAFSLEFDKGFLHIDEYPPDANQGFDIPSALISFPSFNARMNFSEDEFLNNSPILSKFQETSPVLSYTEVL  569 (676)
Q Consensus       490 l~lP~~~St~~ls~~FdK~fL~~~EYPPDANrGFdIpsAvIt~~~~~~~~~~~~~~~~~~spl~~~~~~~~~~~iyT~~L  569 (676)
                      ++|||+ |+++|+|||||+||||+|||||||||||||||||++++..                     +...+++||++|
T Consensus       442 l~lP~~-st~~~s~~f~K~~L~~~EyPpDAnrGfdi~~avi~~~~~~---------------------~~~~~~~~T~~l  499 (564)
T PF04113_consen  442 LTLPPN-STVTLSIDFDKAFLRYTEYPPDANRGFDIPSAVITVLDPN---------------------SSSPYRIYTESL  499 (564)
T ss_pred             EEECCC-ceEEEEEEEEeeeechhhCCCCcccCcccCceEEEeecCC---------------------CCccEEEecccc
Confidence            999998 9999999999999999999999999999999999986421                     234689999999


Q ss_pred             cccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhhhhcCcchhhHHHHHHHHHHHH
Q 005805          570 LIPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSRAGHKAGWISQLLSRLSAKL  636 (676)
Q Consensus       570 Ll~LPTPDFSMPYNVI~lTsTViAL~FGsi~NlltRr~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  636 (676)
                      ||+||||||||||||||||||||||+||+|||+||||+..+|...+..+.++   +++++++|++|+
T Consensus       500 Lv~LptPDFSMPyNVI~lt~Tv~Al~FG~i~nlltrr~~~~~~~~~~~~~~~---~~kL~~~i~~~~  563 (564)
T PF04113_consen  500 LVSLPTPDFSMPYNVIILTCTVMALAFGSIFNLLTRRFVTEEEAEKSKAQSK---LRKLKRKIKKKI  563 (564)
T ss_pred             cccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhH---HHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999766555443332212   245665555554

Gpi16, Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase adds glycosylphosphatidylinositols (GPIs) to newly synthesized proteins. Gpi16 is an essential N-glycosylated transmembrane glycoprotein. Gpi16 is largely found on the lumenal side of the ER. It has a single C-terminal transmembrane domain and a small C-terminal, cytosolic extension with an ER retrieval motif [].; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
>KOG2407 consensus GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query676
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 71.0 bits (173), Expect = 9e-13
 Identities = 100/647 (15%), Positives = 179/647 (27%), Gaps = 186/647 (28%)

Query: 73  HGRHHHLFPKAIAQLVKKFRVKEMELSFTQGRWRYEQWGGFDPLSSNNAKPPGVELWAVF 132
           H  HHH+           F   E +  +             D LS    +   V+ +   
Sbjct: 1   HHHHHHM----------DFETGEHQYQYK------------DILSVF--EDAFVDNFDCK 36

Query: 133 DVPQSLVDVYWR-------------NLTHTLSGLFCASINFLESSTTYSAPELTFKPSFG 179
           DV      +  +             + T  L     +     +        E   + ++ 
Sbjct: 37  DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK----QEEMVQKFVEEVLRINYK 92

Query: 180 NLRYGTLPREAVCTENLTPWL---KLLPCRDKAGLSALMDRPSIYRGFYHSQR------L 230
            L         + TE   P +     +  RD+     L +   ++   Y+  R      L
Sbjct: 93  FLM------SPIKTEQRQPSMMTRMYIEQRDR-----LYNDNQVFAK-YNVSRLQPYLKL 140

Query: 231 R--LTSSESGSDEV---DSGIGLDQTLTV-VLQPSS----------WRT-GKTYSVETNI 273
           R  L       + +     G G    + + V               W       S ET +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSG-KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 274 QPSWSISSIFGRNIPGKCVIAKSSNVYLQLDNGLVGELKNLERENAKY---------VAN 324
           +    +      N   +     SSN+ L++ + +  EL+ L +    Y         V N
Sbjct: 200 EMLQKLLYQIDPNWTSRS--DHSSNIKLRIHS-IQAELRRLLKSK-PYENCLLVLLNVQN 255

Query: 325 TFESEGFQSNHAFKISV-TPDK-VFEEVDNLHGKSTSVI---YGFSVE-------KYSDS 372
                 F  N + KI + T  K V + +        S+       + +       KY D 
Sbjct: 256 AKAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 373 QPFDLGLTWKIPVVWSCQQAPLHASRF--LMGSGNERGAIAISLEPTESSEGLPTSHIID 430
           +P DL      P        P   S     +  G          +  +       + II 
Sbjct: 314 RPQDL------PRE-VLTTNPRRLSIIAESIRDGLAT------WDNWKHVNCDKLTTII- 359

Query: 431 GRCELRVDIFQVVPWYIKVYFHTLQVFVDKQPRAMADVVDKIRVSPSK------DKVSPG 484
              E  +++ +  P   +  F  L VF              I   P+         V   
Sbjct: 360 ---ESSLNVLE--PAEYRKMFDRLSVFPP-------SA--HI---PTILLSLIWFDVIKS 402

Query: 485 VMEMILKLPCGSKSAAF-----------SLEFD-------KGFLH---IDEY-PPDANQG 522
            + +++       S              S+  +       +  LH   +D Y  P     
Sbjct: 403 DVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 523 FDIPSALIS--FPSF------NARMNFSEDEF----LNNSPILSKFQETSPVLSYTEVLL 570
            D+    +   F S       N         F    L+   +  K +  S   + +  +L
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521

Query: 571 IPLTTPDFSMPYNVITITCTVFALYFGSLLNVLRRRVDEEERILRSR 617
             L    F  PY  I      +     ++L+ L +    EE ++ S+
Sbjct: 522 NTLQQLKFYKPY--ICDNDPKYERLVNAILDFLPK---IEENLICSK 563
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00