Citrus Sinensis ID: 005818
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 676 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM5 | 669 | Probable rhamnose biosynt | yes | no | 0.982 | 0.992 | 0.840 | 0.0 | |
| Q9LH76 | 664 | Probable rhamnose biosynt | no | no | 0.980 | 0.998 | 0.823 | 0.0 | |
| Q9LPG6 | 667 | Probable rhamnose biosynt | no | no | 0.980 | 0.994 | 0.815 | 0.0 | |
| Q8VDR7 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.483 | 0.921 | 0.479 | 3e-87 | |
| Q54WS6 | 434 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.467 | 0.728 | 0.469 | 1e-85 | |
| O95455 | 350 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.483 | 0.934 | 0.470 | 6e-85 | |
| A6QLW2 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.483 | 0.921 | 0.467 | 1e-84 | |
| Q5UR12 | 323 | Putative dTDP-D-glucose 4 | N/A | no | 0.460 | 0.962 | 0.466 | 1e-76 | |
| P37777 | 361 | dTDP-glucose 4,6-dehydrat | no | no | 0.467 | 0.875 | 0.415 | 4e-66 | |
| P27830 | 355 | dTDP-glucose 4,6-dehydrat | N/A | no | 0.471 | 0.898 | 0.415 | 1e-65 |
| >sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/665 (84%), Positives = 606/665 (91%), Gaps = 1/665 (0%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
YTPKNILITGAAGFIASHV NRLI +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNFKF+K
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ASADLV+ +L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAF+ +LHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRV DVA DICKLF+++P+ IKFV+NRPFNDQRYFLD QKLK+LGW
Sbjct: 244 VGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGWS 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKINNS 364
ER TWEEGL+KTM WY NP+WWGDVSGALLPHPR M P D + ++
Sbjct: 304 ERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSEK 363
Query: 365 -SQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ 423
SQ+ MVV + +SN + QKP LKFLIYG+TGWIGGLL KIC+K+GI +EYGKGRLE+RS
Sbjct: 364 PSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSS 423
Query: 424 LLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNY 483
LL DIQ+VKPTHVFN+AGVTGRPNVDWCE+HK ETIR NV GTLTLADVCRE+GLLMMN+
Sbjct: 424 LLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNF 483
Query: 484 ATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 543
ATGCIFEYD KHPEG+GIGFKEED PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS
Sbjct: 484 ATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 543
Query: 544 SDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNE 603
SDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPIS+EMAKRNL GIWNFTNPGVVSHNE
Sbjct: 544 SDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNE 603
Query: 604 ILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVF 663
ILEMY+ YI+P FKW NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELLSIKESLIK +
Sbjct: 604 ILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAY 663
Query: 664 EPNKK 668
PNKK
Sbjct: 664 GPNKK 668
|
Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/668 (82%), Positives = 608/668 (91%), Gaps = 5/668 (0%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT Y PKNILITGAAGFIASHV NRL+ +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNF
Sbjct: 1 MAT-YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+++L+TE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +L
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEV HVYNIGT +ERRVIDVA DI KLF ++PD+ I++VENRPFNDQRYFLD QKLK+
Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK 360
LGW ER WEEGL+KTM+WY NP+WWGDVSGALLPHPR M P + DG D K
Sbjct: 300 LGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPG-DRHSDGSDEH---K 355
Query: 361 INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN 420
+ +Q+ VV +K+ S K LKFLIYG+TGW+GGLL K+CEK+GIP+EYGKGRLE+
Sbjct: 356 NADGNQTFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLED 415
Query: 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480
R+ L+ADI+++KP+HVFNAAG+TGRPNVDWCE+HK ETIR NV GTLTLADVCREN LLM
Sbjct: 416 RASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLM 475
Query: 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
MN+ATGCIFEYDA HPEG+GIGFKEEDKPNFTGSFYSKTKAMVEELL+E+DNVCTLRVRM
Sbjct: 476 MNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRM 535
Query: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS 600
PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTNPGVVS
Sbjct: 536 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVS 595
Query: 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK 660
HNEILEMYK+YI+P FKW+NF LEEQAKVIVAPRSNNE+D +KL KEFPE+LSIK+SLIK
Sbjct: 596 HNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIK 655
Query: 661 NVFEPNKK 668
VFEPNK+
Sbjct: 656 YVFEPNKR 663
|
Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/666 (81%), Positives = 602/666 (90%), Gaps = 3/666 (0%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
T Y PKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCS+LKNL+PS SPNFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+KGD+AS DLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+T
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
GQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
ITTRGNNVYGPNQFPEK+IPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHK
Sbjct: 184 ITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 243
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLG 302
GE+GHVYN+GTK+ERRVIDVA DICKLF +P++ I+FVENRPFNDQRYFLD QKLK+LG
Sbjct: 244 GEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLG 303
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKIN 362
W ER WE+GL+KTM WY NP+WWGDVSGALLPHPR M P G++ + +
Sbjct: 304 WQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRLSDGSSEKKDVSS 361
Query: 363 NSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS 422
N+ Q+ VV K+ S K LKFLIYG+TGW+GGLL K+CEK+GI +EYGKGRLE+R+
Sbjct: 362 NTVQTFTVV-TPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRA 420
Query: 423 QLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMN 482
L+ADI+++KPTHVFNAAG+TGRPNVDWCE+HKPETIR NV GTLTLADVCREN LLMMN
Sbjct: 421 SLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMN 480
Query: 483 YATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 542
+ATGCIFEYDA HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPI
Sbjct: 481 FATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPI 540
Query: 543 SSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHN 602
SSDLNNPRNFITKISRYNKVV+IPNSMT+LDELLPIS+EMAKRNL GIWNFTNPGVVSHN
Sbjct: 541 SSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHN 600
Query: 603 EILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNV 662
EILEMYK YI+PGFKW+NFT+EEQAKVIVA RSNNE+D SKL KEFPE+LSIKESL+K V
Sbjct: 601 EILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYV 660
Query: 663 FEPNKK 668
FEPNK+
Sbjct: 661 FEPNKR 666
|
Involved in the synthesis of pectinaceous rhamnogalacturonan I, the major component of Arabidopsis mucilage. Required for the normal seed coat epidermal development. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2 | Back alignment and function description |
|---|
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 218/336 (64%), Gaps = 9/336 (2%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + EKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G +++
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF---DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KGE G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE 253
Query: 248 VYNIGTKKERRVIDVATDICKLF-----SLNPDTQIKFVENRPFNDQRYFLDVQKLKQLG 302
+YNIGT E V+ +A ++ +L ++ + +V +RP ND RY + +K+ LG
Sbjct: 254 IYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLG 313
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
W +V WEEG++KT++WY N W + AL P P
Sbjct: 314 WKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
|
Mus musculus (taxid: 10090) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1 | Back alignment and function description |
|---|
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 220/360 (61%), Gaps = 44/360 (12%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILITG AGFI SH+ L + KI+VLDKLDYCSN+ NL NFKF KG++
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNILD 71
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
++L+ I EKID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++K+FI
Sbjct: 72 SELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKKFI 130
Query: 130 HVSTDEVYGE--------TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
+VSTDEVYG + ++E S L PTNPYSA+KAGAE LV +Y +S+ LP
Sbjct: 131 YVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKLP 190
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
VI TR NN+YGP Q+PEK+IPKFI L + K IHG G N R+YLY +D+ AFD IL
Sbjct: 191 VIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDIILR 250
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ------------------------ 277
KGE+G+VYNIGT E +DVA I + S+N +
Sbjct: 251 KGEIGNVYNIGTDFEISNLDVAKKIINI-SINLNNNNNNNNNNNNNNNNNNNNNNNNNNN 309
Query: 278 ----------IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWW 327
I ++++RPFND RY ++ KL LGW + ++WEEG++KT WY +N ++W
Sbjct: 310 DFNIMDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
|
Dictyostelium discoideum (taxid: 44689) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 220/336 (65%), Gaps = 9/336 (2%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE 253
Query: 248 VYNIGTKKERRVIDVATDICKLF-SLNPDTQ----IKFVENRPFNDQRYFLDVQKLKQLG 302
+YNIGT E V+ +A ++ +L N +++ + +V +RP ND RY + +K+ LG
Sbjct: 254 IYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLG 313
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
W +V W+EG++KT++WY N W +V AL P P
Sbjct: 314 WRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
|
Homo sapiens (taxid: 9606) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/336 (46%), Positives = 220/336 (65%), Gaps = 9/336 (2%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGE 253
Query: 248 VYNIGTKKERRVIDVATDICKLF-SLNPDTQ----IKFVENRPFNDQRYFLDVQKLKQLG 302
+YNIGT E V+ +A ++ +L N +++ + +V++RP ND RY + +K+ LG
Sbjct: 254 IYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLG 313
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
W +V W+EG++KT++WY N W + AL P P
Sbjct: 314 WRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
|
Bos taurus (taxid: 9913) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 206/317 (64%), Gaps = 6/317 (1%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
KNIL+TG GFI S+ N + Y I V D DYC++++N+ + + K IKGD+
Sbjct: 2 KNILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCASVENVEWNNRT---KLIKGDI 58
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ DL+ L +IDTI+HFAA +HVDNSF NS FT+ N++GTHVLLE ++ G++K
Sbjct: 59 RNFDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLKL 118
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F H+STDEVYGE D + E S L PTNPY+ATKAGAE +V +Y SY LP+I R
Sbjct: 119 FFHMSTDEVYGEIDTTDT--SREVSLLCPTNPYAATKAGAEHIVKSYFLSYKLPIIIARC 176
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
NNVYG NQ+PEKLIPKFI + GK L I G G++ R++++ DVA+A D +++ G +G
Sbjct: 177 NNVYGRNQYPEKLIPKFICSLLDGKKLHIQGTGNSRRNFIHAIDVADAVDLVINNGVIGE 236
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYE-R 306
YNIG E V+DVA +C + +N + Q+++V +R FND RY + K+K LGW + R
Sbjct: 237 TYNIGVTNEHSVLDVAQILCDIAGVNLENQLEYVPDRLFNDFRYNITNDKIKSLGWEQSR 296
Query: 307 VTWEEGLQKTMKWYISN 323
+++ L + WY N
Sbjct: 297 KDFKKELVELFDWYKVN 313
|
Acanthamoeba polyphaga (taxid: 5757) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P37777|RMLB_SHIFL dTDP-glucose 4,6-dehydratase OS=Shigella flexneri GN=rfbB PE=3 SV=2 | Back alignment and function description |
|---|
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 200/339 (58%), Gaps = 23/339 (6%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
A + I + D +MH AA++HVD S F + NI GT+VLLEA + + +
Sbjct: 62 AVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDE 121
Query: 125 IK---RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ N+EA L P++PYSA+KA ++ LV A+
Sbjct: 122 KKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I T +N YGP FPEKLIP IL A++GK LPI+G G +R +LY ED A
Sbjct: 182 KRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-LNPD-----TQIKFVENRPFND 288
A T++ +G+ G YNIG E++ IDV IC L + P QI +V +RP +D
Sbjct: 242 ALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDW 326
+RY +D K+ ++LGW + T+E G++KT++WY++N +W
Sbjct: 302 RRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNW 340
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Shigella flexneri (taxid: 623) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P27830|RMLB2_ECOLI dTDP-glucose 4,6-dehydratase 2 OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3 | Back alignment and function description |
|---|
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 199/344 (57%), Gaps = 25/344 (7%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F K D+
Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----IT 122
+ + + D +MH AA++HVD S F + NI GT+ LLEA + +T
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 123 GQIK---RFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
K RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
YGLP + T +N YGP FPEKLIP IL A+ GK LP++G+G +R +LY ED A A
Sbjct: 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALY 237
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDTQ---------IKFVENRPFN 287
+ G+VG YNIG ER+ +DV IC+L L P+ I FV +RP +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGH 297
Query: 288 DQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV 330
D RY +D K+ ++LGW + T+E G++KT++WY++N WW V
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Escherichia coli (strain K12) (taxid: 83333) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 676 | ||||||
| 283488505 | 681 | rhamnose synthase [Gossypium hirsutum] | 0.988 | 0.980 | 0.855 | 0.0 | |
| 225461808 | 675 | PREDICTED: probable rhamnose biosyntheti | 0.986 | 0.988 | 0.852 | 0.0 | |
| 211906526 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.977 | 0.991 | 0.852 | 0.0 | |
| 283488503 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.982 | 0.995 | 0.849 | 0.0 | |
| 356549610 | 669 | PREDICTED: probable rhamnose biosyntheti | 0.979 | 0.989 | 0.849 | 0.0 | |
| 356544142 | 669 | PREDICTED: probable rhamnose biosyntheti | 0.979 | 0.989 | 0.849 | 0.0 | |
| 356525600 | 668 | PREDICTED: probable rhamnose biosyntheti | 0.974 | 0.986 | 0.843 | 0.0 | |
| 356556634 | 668 | PREDICTED: probable rhamnose biosyntheti | 0.974 | 0.986 | 0.846 | 0.0 | |
| 297839725 | 669 | RHM1/ROL1 [Arabidopsis lyrata subsp. lyr | 0.982 | 0.992 | 0.848 | 0.0 | |
| 357140549 | 667 | PREDICTED: probable rhamnose biosyntheti | 0.980 | 0.994 | 0.839 | 0.0 |
| >gi|283488505|gb|ADB24774.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/673 (85%), Positives = 617/673 (91%), Gaps = 5/673 (0%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MA YTPKNILITGAAGFIASHVCNRLI NYP+YKIVVLDKLDYCS+LKNL+PSR SPNF
Sbjct: 1 MANKYTPKNILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSSLKNLDPSRSSPNF 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KFIKGD+ASADLVHFIL TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 61 KFIKGDIASADLVHFILQTEFIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQIKRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 121 VTGQIKRFIHVSTDEVYGETDEDAMVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYG NQFPEKLIPKFILLAM GK LPIHGDGSNVRSYLYCEDVAEAF+ IL
Sbjct: 181 PVITTRGNNVYGTNQFPEKLIPKFILLAMNGKILPIHGDGSNVRSYLYCEDVAEAFEVIL 240
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
H+GEVGHVYNIGTKKERRVIDVA DIC+LF+L+P++QIKFVENRPFNDQRYFLD QKLK
Sbjct: 241 HRGEVGHVYNIGTKKERRVIDVARDICRLFNLDPESQIKFVENRPFNDQRYFLDDQKLKS 300
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTT---- 356
LGWYER TWEEGL+KTM+WY+SNPDWWGDVSGALLPHPR M P IE + + DT+
Sbjct: 301 LGWYERTTWEEGLKKTMEWYVSNPDWWGDVSGALLPHPRMLMLPGIERQFNAPDTSNSGL 360
Query: 357 -FMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415
N +QSRM+V + K N QKP LKFLIYGRTGWIGGLL K+CEK+GIPFEYGK
Sbjct: 361 GSAPVTNKFNQSRMLVPSPKHNIPSQKPSLKFLIYGRTGWIGGLLGKLCEKQGIPFEYGK 420
Query: 416 GRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE 475
GRLE RSQLL DIQ VKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLAD+CRE
Sbjct: 421 GRLEQRSQLLDDIQTVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADICRE 480
Query: 476 NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCT 535
+ LLM+NYATGCIFEYDA HP GTG+GFKEEDKPNFTGSFYSKTKA+VEELL+E+DNVCT
Sbjct: 481 HDLLMINYATGCIFEYDATHPLGTGVGFKEEDKPNFTGSFYSKTKAVVEELLREFDNVCT 540
Query: 536 LRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTN 595
LRVRMPISSDL+NPRNFITKI+RYNKVV+I NSMTILDELLP+S+EMAKRNL GIWNFTN
Sbjct: 541 LRVRMPISSDLSNPRNFITKITRYNKVVDISNSMTILDELLPVSIEMAKRNLRGIWNFTN 600
Query: 596 PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIK 655
PGVVSHNEIL+MYK YIDP F W NF+L+EQAKVIVAPRSNNELDASKLK EFPELLSIK
Sbjct: 601 PGVVSHNEILQMYKDYIDPNFNWVNFSLQEQAKVIVAPRSNNELDASKLKNEFPELLSIK 660
Query: 656 ESLIKNVFEPNKK 668
+SLIK VFEPN+K
Sbjct: 661 DSLIKYVFEPNRK 673
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225461808|ref|XP_002285634.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/672 (85%), Positives = 618/672 (91%), Gaps = 5/672 (0%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT +TPKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCSNLKNL PS+ SPNF
Sbjct: 1 MAT-HTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ SADLV+F+L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+GKPLPIHGDGSNVRSYLYCEDVAEAF+ IL
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVIL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
H+GEVGHVYNIGTKKERRVIDVA D+C LFS++P+T IKFVENRPFNDQRYFLD QKLK
Sbjct: 240 HRGEVGHVYNIGTKKERRVIDVAKDVCNLFSMDPETSIKFVENRPFNDQRYFLDDQKLKI 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAP-AIEGKVDG---HDTT 356
LGW ER TW+EGL+KTM+WYI+NP+WWGDVSGALLPHPR M P IE DG D+T
Sbjct: 300 LGWSERTTWQEGLKKTMEWYINNPNWWGDVSGALLPHPRMLMMPGGIERHFDGSEDSDST 359
Query: 357 FMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKG 416
+N +Q+RMVV KS SS +KP LKFL+YGRTGWIGGLL K+CEK+GIP+EYG+G
Sbjct: 360 ASPVSSNLNQTRMVVPVPKSVSSPRKPSLKFLLYGRTGWIGGLLGKLCEKQGIPYEYGRG 419
Query: 417 RLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN 476
RLE+R+ LLADIQNVKPTHVFNAAGVTGRPNVDWCE+HKPETIR NV GTLTLADVCRE+
Sbjct: 420 RLEDRASLLADIQNVKPTHVFNAAGVTGRPNVDWCESHKPETIRANVAGTLTLADVCREH 479
Query: 477 GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTL 536
GLLMMN+ATGCIFEYDA HPEG+GIGFKEED PNF GSFYSKTKAMVEELLKE+DNVCTL
Sbjct: 480 GLLMMNFATGCIFEYDAAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEELLKEFDNVCTL 539
Query: 537 RVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNP 596
RVRMPISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPIS+EMAKRN GIWNFTNP
Sbjct: 540 RVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNP 599
Query: 597 GVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKE 656
GVVSHNEILEMYK+YIDP FKW NFTLEEQAKVIVA RSNNE+DASKLK EFPELL IK+
Sbjct: 600 GVVSHNEILEMYKSYIDPNFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLPIKD 659
Query: 657 SLIKNVFEPNKK 668
SLIK VFEPN+K
Sbjct: 660 SLIKYVFEPNQK 671
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906526|gb|ACJ11756.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/666 (85%), Positives = 615/666 (92%), Gaps = 5/666 (0%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
YTPKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCSNLKNL PS+ SPNFKF+K
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+GK LPIHGDGSNVRSYLYCEDVAEAF+ ILHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRVIDVA DICKLFS++P+T IKFVENRPFNDQRYFLD +KLK LGW
Sbjct: 244 VGHVYNIGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDEKLKNLGWS 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIE--GKVDGHDTTFMLKIN 362
E+ WEEGL+KT++WY NP+WWGDVSGALLPHPR M P +G T+F +
Sbjct: 304 EQTVWEEGLKKTIEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDSEEGKGTSFA---S 360
Query: 363 NSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS 422
+Q+RMVV K++SS QKP LKFLIYGRTGWIGGLL ++CEK+GIPFEYG+GRLE+RS
Sbjct: 361 GPNQTRMVVPTFKTSSSTQKPALKFLIYGRTGWIGGLLGQLCEKQGIPFEYGRGRLEDRS 420
Query: 423 QLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMN 482
L+ADIQN+KPTHVFNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLADVCRE+GLLMMN
Sbjct: 421 SLMADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLMMN 480
Query: 483 YATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 542
+ATGCIFEYDA HPEG+GIG+KEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI
Sbjct: 481 FATGCIFEYDAGHPEGSGIGYKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 540
Query: 543 SSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHN 602
SSDLNNPRNFITKI+RYNKVVNIPNSMTILDELLPIS+EMAKRNL+GIWNFTNPGVVSHN
Sbjct: 541 SSDLNNPRNFITKIARYNKVVNIPNSMTILDELLPISIEMAKRNLNGIWNFTNPGVVSHN 600
Query: 603 EILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNV 662
EILEMYKAYIDP F+W NFTLEEQAKVIVAPRSNNE+DASKLK EFP+LL IKESLIK V
Sbjct: 601 EILEMYKAYIDPKFQWVNFTLEEQAKVIVAPRSNNEMDASKLKNEFPDLLPIKESLIKYV 660
Query: 663 FEPNKK 668
FEPNK+
Sbjct: 661 FEPNKR 666
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|283488503|gb|ADB24773.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/670 (84%), Positives = 618/670 (92%), Gaps = 6/670 (0%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT YTPKNILITGAAGFIASHV NRL+ NYP+YKIVVLDKLDYCSNLKNL PS+ S NF
Sbjct: 1 MAT-YTPKNILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSQSSRNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+GK LPIHGDG+NVRSYLYCEDVAEAF+ IL
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGTNVRSYLYCEDVAEAFEVIL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEVGHVYN+GTKKERRVIDVA DICKLFS++ +T IKFVENRPFNDQRYFLD QKLK
Sbjct: 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDSETSIKFVENRPFNDQRYFLDDQKLKN 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIE--GKVDGHDTTFM 358
LGW ER WE+GL+KT++WY NPDWWGDVSGALLPHPR M P +G DT++
Sbjct: 300 LGWSERTVWEDGLKKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRQFDSEEGKDTSY- 358
Query: 359 LKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRL 418
I++ SQ++MVV SKS+ S QKP LKFLIYGRTGWIGGLL ++C+K+GIPFEYGKGRL
Sbjct: 359 --ISSPSQTQMVVPTSKSSVSSQKPALKFLIYGRTGWIGGLLGQLCDKQGIPFEYGKGRL 416
Query: 419 ENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478
E+RS L ADI+N+KPTHVFNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLADVCRE+GL
Sbjct: 417 EDRSSLTADIRNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGL 476
Query: 479 LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 538
LMMN+ATGCIFEYDA HP+G+GIGFKEEDKPNFTGSFYSKTKAMVEELLKEY+NVCTLRV
Sbjct: 477 LMMNFATGCIFEYDAGHPQGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYNNVCTLRV 536
Query: 539 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGV 598
RMPISSDLNNPRNFITKISRY+KVVNIPNSMTILDELLPIS+EMAKRNL+GIWNFTNPGV
Sbjct: 537 RMPISSDLNNPRNFITKISRYSKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGV 596
Query: 599 VSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESL 658
VSHNEILEMYK YIDP F+W NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELL IKESL
Sbjct: 597 VSHNEILEMYKKYIDPKFQWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLPIKESL 656
Query: 659 IKNVFEPNKK 668
IK VFEPNK+
Sbjct: 657 IKYVFEPNKR 666
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549610|ref|XP_003543185.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/673 (84%), Positives = 616/673 (91%), Gaps = 11/673 (1%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT +TPKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCSNLKNL PS+ SPNF
Sbjct: 1 MAT-HTPKNILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLIPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+GKPLPIHGDGSNVRSYLYCEDVAEAF+ IL
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFELIL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEVGHVYNIGTKKERRVIDVA D+C+LF ++P+T IKFVENRPFNDQRYFLD +KLK
Sbjct: 240 HKGEVGHVYNIGTKKERRVIDVAKDMCRLFKMDPETSIKFVENRPFNDQRYFLDDEKLKI 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAP-AIEGKVDGHD----T 355
LGW ER TWEEGL+KTM WYI+NPDWWGDVSGALLPHPR M P +E DG D
Sbjct: 300 LGWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGLERHFDGSDEEKPA 359
Query: 356 TFMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415
+++ S+ +RMVV SK+ +S QKP LKFLIYGRTGWIGGLL K+CEK+GIP+EYGK
Sbjct: 360 SYV-----STNTRMVVPTSKNVNSSQKPALKFLIYGRTGWIGGLLGKLCEKQGIPYEYGK 414
Query: 416 GRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE 475
GRLE+RS L+ADIQNVKPTH+FNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLADV RE
Sbjct: 415 GRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVSRE 474
Query: 476 NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCT 535
+GLLM+NYATGCIFEYDA HPEG+GIGFKEED+PNF GSFYSKTKAMVEELLKEYDNVCT
Sbjct: 475 HGLLMINYATGCIFEYDAAHPEGSGIGFKEEDRPNFFGSFYSKTKAMVEELLKEYDNVCT 534
Query: 536 LRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTN 595
LRVRMPISSDL+NPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTN
Sbjct: 535 LRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTN 594
Query: 596 PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIK 655
PG VSHNEILEMY+ YIDP FKW NF LEEQAKVI+A RSNNE+DASKLK EFPELLSIK
Sbjct: 595 PGAVSHNEILEMYRDYIDPSFKWANFNLEEQAKVIIAARSNNEMDASKLKNEFPELLSIK 654
Query: 656 ESLIKNVFEPNKK 668
ESLIK VFEPNKK
Sbjct: 655 ESLIKYVFEPNKK 667
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544142|ref|XP_003540514.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/673 (84%), Positives = 616/673 (91%), Gaps = 11/673 (1%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT +TPKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCSNLKNL PS+ SPNF
Sbjct: 1 MAT-HTPKNILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLIPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+GKPLPIHGDGSNVRSYLYCEDVAEAF+ IL
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVIL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEVGHVYNIGTKKERRVIDVA DIC+LF ++P+T IKFVENRPFNDQRYFLD +KLK
Sbjct: 240 HKGEVGHVYNIGTKKERRVIDVAKDICRLFKMDPETSIKFVENRPFNDQRYFLDDEKLKI 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAP-AIEGKVDGHDT---- 355
LGW ER TWEEGL+KTM WYI+NPDWWGDVSGALLPHPR M P +E DG D
Sbjct: 300 LGWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGLERHFDGSDEEKPP 359
Query: 356 TFMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415
+++ S+ +RMVV SK+ +S QKP LKFL+YGRTGWIGGLL K+CEK+ IP+EYGK
Sbjct: 360 SYV-----STNTRMVVPTSKNVNSSQKPALKFLLYGRTGWIGGLLGKLCEKQEIPYEYGK 414
Query: 416 GRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE 475
GRLE+RS L+ADIQNVKPTH+FNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLADV RE
Sbjct: 415 GRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVSRE 474
Query: 476 NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCT 535
+G+LM+NYATGCIFEYD HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELLKEYDNVCT
Sbjct: 475 HGILMINYATGCIFEYDKAHPEGSGIGFKEEDKPNFIGSFYSKTKAMVEELLKEYDNVCT 534
Query: 536 LRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTN 595
LRVRMPISSDL+NPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTN
Sbjct: 535 LRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTN 594
Query: 596 PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIK 655
PG VSHNEILEMY+ YIDP FKWTNF LEEQAKVI+APRSNNE+DASKLK EFPELLSIK
Sbjct: 595 PGAVSHNEILEMYRDYIDPSFKWTNFNLEEQAKVIIAPRSNNEMDASKLKNEFPELLSIK 654
Query: 656 ESLIKNVFEPNKK 668
ESLIK VFEPNKK
Sbjct: 655 ESLIKYVFEPNKK 667
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525600|ref|XP_003531412.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/669 (84%), Positives = 615/669 (91%), Gaps = 10/669 (1%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
YTPKNILITGAAGFIASHV NRL+ +YP+YKIVVLDKLDYCS+LKNL PS+ SPNFKF+K
Sbjct: 4 YTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSSLKNLLPSKSSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGET+EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETEEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+GK LPIHGDGSNVRSYLYCEDVAEAF+ +LHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMQGKNLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRV+DVA DIC+LFS++P+T IKFVENRPFNDQRYFLD QKLK LGW
Sbjct: 244 VGHVYNIGTKKERRVVDVAKDICRLFSMDPETCIKFVENRPFNDQRYFLDDQKLKDLGWS 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPA-----IEGKVDGHDTTFML 359
ER TWEEGL+KTM WYI+NPDWWGDV+GALLPHPR M P EG +G +F
Sbjct: 304 ERTTWEEGLKKTMDWYINNPDWWGDVTGALLPHPRMLMMPGGLERHFEGSEEGKPASF-- 361
Query: 360 KINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE 419
SS +R+VV +SK+ SS+QK FLIYGRTGWIGGLL K+CEK+GIP+EYGKGRLE
Sbjct: 362 ---GSSNTRIVVPSSKNTSSQQKHPFMFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLE 418
Query: 420 NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479
+RS LLAD+QNVKPTHVFNAAGVTGRPNVDWCE+HK ETIRTNV GTLT+ADVCRE+G+L
Sbjct: 419 DRSSLLADLQNVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTMADVCREHGIL 478
Query: 480 MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 539
M+NYATGCIFEY+A HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELL++YDNVCTLRVR
Sbjct: 479 MINYATGCIFEYNATHPEGSGIGFKEEDKPNFIGSFYSKTKAMVEELLRDYDNVCTLRVR 538
Query: 540 MPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVV 599
MPISSDL+NPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTNPGVV
Sbjct: 539 MPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLKGIWNFTNPGVV 598
Query: 600 SHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLI 659
SHNEILEMY+ YIDP FKW+NFTLEEQAKVIVAPRSNNE+DASKLK EFPELLSIKESLI
Sbjct: 599 SHNEILEMYRDYIDPNFKWSNFTLEEQAKVIVAPRSNNEMDASKLKTEFPELLSIKESLI 658
Query: 660 KNVFEPNKK 668
K VFEPNKK
Sbjct: 659 KYVFEPNKK 667
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556634|ref|XP_003546628.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1188 bits (3073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/669 (84%), Positives = 612/669 (91%), Gaps = 10/669 (1%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
YTPKNILITGAAGFIASHV NRL+ +YP+YKIVVLDKLDYCSNLKNL PS+ SPNFKF+K
Sbjct: 4 YTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ SADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGET+EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETEEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+GK LPIHGDGSNVRSYLYCEDVAEAF+ +LHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMQGKNLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRVIDVA DIC+LFS++P+ IKFVENRPFNDQRYFLD QKLK LGW
Sbjct: 244 VGHVYNIGTKKERRVIDVAKDICRLFSMDPEICIKFVENRPFNDQRYFLDDQKLKDLGWS 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPA-----IEGKVDGHDTTFML 359
ER TWEEGL+KTM WYI+NPDWWGDV+GALLPHPR M P EG + +F
Sbjct: 304 ERTTWEEGLKKTMDWYINNPDWWGDVTGALLPHPRMLMMPGGLDRHFEGSEEEKPASF-- 361
Query: 360 KINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE 419
SS +RMVV SK+ SS+ K KFLIYGRTGWIGGLL K+CEK+GIP+EYGKGRLE
Sbjct: 362 ---GSSNTRMVVPPSKNTSSQHKHPFKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLE 418
Query: 420 NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479
+RS L+AD+QNVKPTHVFNAAGVTGRPNVDWCE+HK ETIRTNVVGTLT+ADVCRE+G+L
Sbjct: 419 DRSSLMADLQNVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVVGTLTMADVCREHGIL 478
Query: 480 MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 539
M+NYATGCIFEY+A HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELL+EYDNVCTLRVR
Sbjct: 479 MVNYATGCIFEYNATHPEGSGIGFKEEDKPNFIGSFYSKTKAMVEELLREYDNVCTLRVR 538
Query: 540 MPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVV 599
MPISSDL+NPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTNPGVV
Sbjct: 539 MPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVV 598
Query: 600 SHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLI 659
SHNEILEMY+ YIDP FKW NFTLEEQAKVIVAPRSNNE+DASKLK EFPELLSIKESLI
Sbjct: 599 SHNEILEMYRDYIDPNFKWANFTLEEQAKVIVAPRSNNEMDASKLKTEFPELLSIKESLI 658
Query: 660 KNVFEPNKK 668
K VFEPNKK
Sbjct: 659 KYVFEPNKK 667
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839725|ref|XP_002887744.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] gi|297333585|gb|EFH64003.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/665 (84%), Positives = 606/665 (91%), Gaps = 1/665 (0%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
YTPKNILITGAAGFIASHV NRLI +YP Y IVVLDKLDYCSNLKNLNPS+ SPNFKF+K
Sbjct: 4 YTPKNILITGAAGFIASHVANRLIRSYPHYNIVVLDKLDYCSNLKNLNPSKQSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ASADLV+ +L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAF+ ILHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRV DVA DICKLFS++P+ IKFVENRPFNDQRYFLD QKLK+LGW
Sbjct: 244 VGHVYNIGTKKERRVNDVARDICKLFSMDPEANIKFVENRPFNDQRYFLDDQKLKKLGWS 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKINNS 364
ER TWEEGL+KTM+WY NP+WWGDVSGALLPHPR M P D + ++
Sbjct: 304 ERTTWEEGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSEK 363
Query: 365 -SQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ 423
SQ+ MVV + +S+ + QKP LKFLIYG+TGWIGGLL KICEK+GI +EYGKGRLE+RS
Sbjct: 364 PSQTHMVVPSPRSSGTPQKPSLKFLIYGKTGWIGGLLGKICEKQGIAYEYGKGRLEDRSS 423
Query: 424 LLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNY 483
LL DIQ+VKPTHVFN+AGVTGRPNVDWCE+HK ETIR NV GTLTLADVCRE+GLLMMN+
Sbjct: 424 LLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNF 483
Query: 484 ATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 543
ATGCIFEYD KHPEG+GIGFKEED PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS
Sbjct: 484 ATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 543
Query: 544 SDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNE 603
SDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISVEMAKRNL GIWNFTNPGVVSHNE
Sbjct: 544 SDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISVEMAKRNLKGIWNFTNPGVVSHNE 603
Query: 604 ILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVF 663
ILEMY+ YI+P FKW NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELLSIKESLIK F
Sbjct: 604 ILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAF 663
Query: 664 EPNKK 668
EPNKK
Sbjct: 664 EPNKK 668
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357140549|ref|XP_003571828.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1183 bits (3061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/668 (83%), Positives = 610/668 (91%), Gaps = 5/668 (0%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT YTPK+ILITGAAGFIASHV NR++ NYP+YKIVVLDKLDYCSNLKNL P+ SPNF
Sbjct: 1 MATPYTPKSILITGAAGFIASHVTNRIVRNYPDYKIVVLDKLDYCSNLKNLLPASSSPNF 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+F+L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 61 KFVKGDIASADLVNFLLVTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 121 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+GKPLPIHGDGSNVRSYLYCEDVAEAF+ IL
Sbjct: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVIL 240
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
H+GEVGHVYNIGTK+ER V DVA D+CKLF+L D I++V+NRPFNDQRYFLD KLK
Sbjct: 241 HRGEVGHVYNIGTKRERTVTDVAKDVCKLFNLEADKVIQYVDNRPFNDQRYFLDDAKLKS 300
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK 360
LGW ER WEEGL+KTM+WY++N D+WGDVSGALLPHPRT M P EG + ML
Sbjct: 301 LGWSERTRWEEGLRKTMEWYVANSDYWGDVSGALLPHPRTLMMPGCEG---SEEIKGMLN 357
Query: 361 INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN 420
+ ++Q++M + + SN S Q LKFLIYGRTGWIGGLL KICEK+GIP EYGKGRLE
Sbjct: 358 LFTNNQTKM--KTTTSNGSSQTHSLKFLIYGRTGWIGGLLGKICEKQGIPHEYGKGRLEE 415
Query: 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480
RS L+ DIQ VKPTHVFNAAGVTGRPNVDWCE+HKP+TIRTNV GTLTLADVCRE+GLL+
Sbjct: 416 RSSLILDIQTVKPTHVFNAAGVTGRPNVDWCESHKPDTIRTNVAGTLTLADVCREHGLLV 475
Query: 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
MNYATGCIFEYDA HPEG+GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 476 MNYATGCIFEYDANHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 535
Query: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS 600
PISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISVEMAKRNL GIWNFTNPGVVS
Sbjct: 536 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISVEMAKRNLRGIWNFTNPGVVS 595
Query: 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK 660
HNEILEMYK Y+DP +KWTNFTLEEQAKVIVAPRSNNE+DA+KLKKEFPELLSIK+SL+K
Sbjct: 596 HNEILEMYKKYLDPSYKWTNFTLEEQAKVIVAPRSNNEMDATKLKKEFPELLSIKDSLVK 655
Query: 661 NVFEPNKK 668
VFEPN+K
Sbjct: 656 YVFEPNRK 663
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 676 | ||||||
| TAIR|locus:2202960 | 669 | RHM1 "rhamnose biosynthesis 1" | 0.983 | 0.994 | 0.840 | 3.50000000002e-313 | |
| TAIR|locus:2099372 | 664 | RHM3 "rhamnose biosynthesis 3" | 0.980 | 0.998 | 0.823 | 1.3e-308 | |
| TAIR|locus:2024902 | 667 | MUM4 "MUCILAGE-MODIFIED 4" [Ar | 0.979 | 0.992 | 0.817 | 2.1e-306 | |
| TAIR|locus:2015489 | 301 | NRS/ER "nucleotide-rhamnose sy | 0.437 | 0.983 | 0.796 | 1.5e-129 | |
| WB|WBGene00015298 | 631 | C01F1.3 [Caenorhabditis elegan | 0.464 | 0.497 | 0.369 | 2.7e-92 | |
| DICTYBASE|DDB_G0279465 | 434 | tgds "putative dTDP-D-glucose | 0.390 | 0.608 | 0.540 | 4e-85 | |
| MGI|MGI:1923605 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.482 | 0.918 | 0.483 | 2.8e-82 | |
| RGD|1306544 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.482 | 0.918 | 0.477 | 2e-81 | |
| UNIPROTKB|O95455 | 350 | TGDS "dTDP-D-glucose 4,6-dehyd | 0.482 | 0.931 | 0.471 | 8.5e-81 | |
| UNIPROTKB|A6QLW2 | 355 | TGDS "dTDP-D-glucose 4,6-dehyd | 0.482 | 0.918 | 0.468 | 2.2e-80 |
| TAIR|locus:2202960 RHM1 "rhamnose biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3004 (1062.5 bits), Expect = 3.5e-313, P = 3.5e-313
Identities = 564/671 (84%), Positives = 613/671 (91%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MA+ YTPKNILITGAAGFIASHV NRLI +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNF
Sbjct: 1 MAS-YTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+ +L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAF+ +L
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEVGHVYNIGTKKERRV DVA DICKLF+++P+ IKFV+NRPFNDQRYFLD QKLK+
Sbjct: 240 HKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKK 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGK-VDG-HDTTFM 358
LGW ER TWEEGL+KTM WY NP+WWGDVSGALLPHPR M P G+ DG D +
Sbjct: 300 LGWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRHFDGSEDNSLA 357
Query: 359 LKINNS-SQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR 417
++ SQ+ MVV + +SN + QKP LKFLIYG+TGWIGGLL KIC+K+GI +EYGKGR
Sbjct: 358 ATLSEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGR 417
Query: 418 LENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG 477
LE+RS LL DIQ+VKPTHVFN+AGVTGRPNVDWCE+HK ETIR NV GTLTLADVCRE+G
Sbjct: 418 LEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHG 477
Query: 478 LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537
LLMMN+ATGCIFEYD KHPEG+GIGFKEED PNFTGSFYSKTKAMVEELLKEYDNVCTLR
Sbjct: 478 LLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537
Query: 538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPG 597
VRMPISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPIS+EMAKRNL GIWNFTNPG
Sbjct: 538 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPG 597
Query: 598 VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKES 657
VVSHNEILEMY+ YI+P FKW NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELLSIKES
Sbjct: 598 VVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKES 657
Query: 658 LIKNVFEPNKK 668
LIK + PNKK
Sbjct: 658 LIKYAYGPNKK 668
|
|
| TAIR|locus:2099372 RHM3 "rhamnose biosynthesis 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2961 (1047.4 bits), Expect = 1.3e-308, P = 1.3e-308
Identities = 550/668 (82%), Positives = 608/668 (91%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
MAT Y PKNILITGAAGFIASHV NRL+ +YP+YKIVVLDKLDYCSNLKNLNPS+ SPNF
Sbjct: 1 MAT-YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNF 59
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KF+KGD+ASADLV+++L+TE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
Sbjct: 60 KFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+TGQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL
Sbjct: 120 VTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
PVITTRGNNVYGPNQFPEKLIPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +L
Sbjct: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300
HKGEV HVYNIGT +ERRVIDVA DI KLF ++PD+ I++VENRPFNDQRYFLD QKLK+
Sbjct: 240 HKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK 299
Query: 301 LGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK 360
LGW ER WEEGL+KTM+WY NP+WWGDVSGALLPHPR M P + DG D K
Sbjct: 300 LGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPG-DRHSDGSDEH---K 355
Query: 361 INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN 420
+ +Q+ VV +K+ S K LKFLIYG+TGW+GGLL K+CEK+GIP+EYGKGRLE+
Sbjct: 356 NADGNQTFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLED 415
Query: 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480
R+ L+ADI+++KP+HVFNAAG+TGRPNVDWCE+HK ETIR NV GTLTLADVCREN LLM
Sbjct: 416 RASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLM 475
Query: 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
MN+ATGCIFEYDA HPEG+GIGFKEEDKPNFTGSFYSKTKAMVEELL+E+DNVCTLRVRM
Sbjct: 476 MNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRM 535
Query: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVS 600
PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPIS+EMAKRNL GIWNFTNPGVVS
Sbjct: 536 PISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVS 595
Query: 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIK 660
HNEILEMYK+YI+P FKW+NF LEEQAKVIVAPRSNNE+D +KL KEFPE+LSIK+SLIK
Sbjct: 596 HNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIK 655
Query: 661 NVFEPNKK 668
VFEPNK+
Sbjct: 656 YVFEPNKR 663
|
|
| TAIR|locus:2024902 MUM4 "MUCILAGE-MODIFIED 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2940 (1040.0 bits), Expect = 2.1e-306, P = 2.1e-306
Identities = 545/667 (81%), Positives = 604/667 (90%)
Query: 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
T Y PKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCS+LKNL+PS SPNFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+KGD+AS DLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+T
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
GQI+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
ITTRGNNVYGPNQFPEK+IPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHK
Sbjct: 184 ITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 243
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLG 302
GE+GHVYN+GTK+ERRVIDVA DICKLF +P++ I+FVENRPFNDQRYFLD QKLK+LG
Sbjct: 244 GEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLG 303
Query: 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKV-DGHDTTFMLKI 361
W ER WE+GL+KTM WY NP+WWGDVSGALLPHPR M P G++ DG +
Sbjct: 304 WQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRLSDGSSEKKDVS- 360
Query: 362 NNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENR 421
+N+ Q+ VV K+ S K LKFLIYG+TGW+GGLL K+CEK+GI +EYGKGRLE+R
Sbjct: 361 SNTVQTFTVV-TPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDR 419
Query: 422 SQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMM 481
+ L+ADI+++KPTHVFNAAG+TGRPNVDWCE+HKPETIR NV GTLTLADVCREN LLMM
Sbjct: 420 ASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMM 479
Query: 482 NYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541
N+ATGCIFEYDA HPEG+GIGFKEEDKPNF GSFYSKTKAMVEELL+E+DNVCTLRVRMP
Sbjct: 480 NFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMP 539
Query: 542 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSH 601
ISSDLNNPRNFITKISRYNKVV+IPNSMT+LDELLPIS+EMAKRNL GIWNFTNPGVVSH
Sbjct: 540 ISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH 599
Query: 602 NEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKN 661
NEILEMYK YI+PGFKW+NFT+EEQAKVIVA RSNNE+D SKL KEFPE+LSIKESL+K
Sbjct: 600 NEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKY 659
Query: 662 VFEPNKK 668
VFEPNK+
Sbjct: 660 VFEPNKR 666
|
|
| TAIR|locus:2015489 NRS/ER "nucleotide-rhamnose synthase/epimerase-reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 239/300 (79%), Positives = 268/300 (89%)
Query: 369 MVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADI 428
MV A+ S+SS FLIYG+TGWIGGLL K+CE +GI + YG GRL++R ++ADI
Sbjct: 1 MVADANGSSSSS----FNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADI 56
Query: 429 QNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCI 488
++VKP+HVFNAAGVTGRPNVDWCE+HK ETIRTNV GTLTLAD+CRE GL+++NYATGCI
Sbjct: 57 ESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCI 116
Query: 489 FEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN 548
FEYD+ HP G+GIGFKEED PNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL N
Sbjct: 117 FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTN 176
Query: 549 PRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMY 608
PRNFITKI+RY KVV+IPNSMTILDELLPIS+EMAKRNL+GI+NFTNPGVVSHNEILEMY
Sbjct: 177 PRNFITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMY 236
Query: 609 KAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFEPNKK 668
+ YIDP F W NFTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIKESLIK VFEPNKK
Sbjct: 237 RDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKK 296
|
|
| WB|WBGene00015298 C01F1.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 119/322 (36%), Positives = 186/322 (57%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS-RLSPNFKF 62
VYTPKN++ITG GFI S+ N + +P V +DKL S+ +N+ S R SP +K
Sbjct: 2 VYTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKL 61
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ D+ + + + +IDT++HFAA + + E +NN+ LE +
Sbjct: 62 VLTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 123 GQIKRFIHVSTDEVYGETD-EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
G+IKRF+H+STDEVYG++D + G E S+L+P NPY+ATK E V AY Y LP
Sbjct: 122 GKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLP 181
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
++T R NN+YGPNQ+ K++P+FI +A I G G +RS+L+ +D + +
Sbjct: 182 IVTARMNNIYGPNQWDVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCE 241
Query: 242 KGEVGHVYNIGTKKERRVIDVATDI-----CKLFSLNPDTQIKFVENRPFNDQRYFLDVQ 296
KGE+ +YN+GT E+ V D+A I +L + + K + +RP+ND RY + ++
Sbjct: 242 KGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISIE 301
Query: 297 KLKQ-LGWYERVTWEEGLQKTM 317
K K LGW ++++G++ T+
Sbjct: 302 KAKNDLGWEPTTSFDDGMRHTV 323
|
|
| DICTYBASE|DDB_G0279465 tgds "putative dTDP-D-glucose 4,6-dehydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 713 (256.0 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 148/274 (54%), Positives = 188/274 (68%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ILITG AGFI SH+ L + KI+VLDKLDYCSN+ NL NFKF KG++
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
++L+ I EKID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++K+
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 128 FIHVSTDEVYG----ETDED---AV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
FI+VSTDEVYG E ++D ++ ++E S L PTNPYSA+KAGAE LV +Y +S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 180 LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
LPVI TR NN+YGP Q+PEK+IPKFI L + K IHG G N R+YLY +D+ AFD I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN 273
L KGE+G+VYNIGT E +DVA I + S+N
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI-SIN 281
|
|
| MGI|MGI:1923605 Tgds "TDP-glucose 4,6-dehydratase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 163/337 (48%), Positives = 222/337 (65%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + EKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G +++
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQ----IKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++ + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V WEEG++KT++WY N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
|
|
| RGD|1306544 Tgds "TDP-glucose 4,6-dehydratase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 161/337 (47%), Positives = 221/337 (65%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL P N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + +EKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ ++++
Sbjct: 78 CDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-YEARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQ----IKFVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N D++ + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V WEEG++KT++WY N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
|
|
| UNIPROTKB|O95455 TGDS "dTDP-D-glucose 4,6-dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 159/337 (47%), Positives = 223/337 (66%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQIK----FVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++++ +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT++WY N W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
|
|
| UNIPROTKB|A6QLW2 TGDS "dTDP-D-glucose 4,6-dehydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 158/337 (46%), Positives = 223/337 (66%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KFI+GD+
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V + TEKID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++++
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 128 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
+NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 247 HVYNIGTKKERRVIDVATDICKLFS-LNPDTQIK----FVENRPFNDQRYFLDVQKLKQL 301
+YNIGT E V+ +A ++ +L N +++++ +V++RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGL 312
Query: 302 GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 338
GW +V W+EG++KT++WY N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SYM5 | RHM1_ARATH | 4, ., 2, ., 1, ., - | 0.8406 | 0.9822 | 0.9925 | yes | no |
| Q9LH76 | RHM3_ARATH | 4, ., 2, ., 1, ., - | 0.8233 | 0.9807 | 0.9984 | no | no |
| Q9LPG6 | RHM2_ARATH | 4, ., 2, ., 1, ., - | 0.8153 | 0.9807 | 0.9940 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 676 | |||
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 0.0 | |
| PLN02778 | 298 | PLN02778, PLN02778, 3,5-epimerase/4-reductase | 0.0 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 1e-173 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-137 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 1e-123 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 9e-85 | |
| PRK10084 | 352 | PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; | 1e-83 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 3e-69 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 8e-62 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-61 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-57 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 7e-55 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 7e-54 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 1e-50 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-46 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 5e-46 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 2e-44 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 8e-44 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-43 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 2e-39 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-38 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 3e-36 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 5e-33 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 2e-29 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 5e-29 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 2e-28 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 6e-27 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 3e-25 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 4e-25 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 4e-24 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 5e-24 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-23 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 2e-23 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 5e-23 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 7e-23 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 3e-22 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 6e-22 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 6e-21 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 6e-21 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 1e-20 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 3e-19 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 8e-19 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 2e-18 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-18 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 2e-17 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 2e-17 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 1e-15 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 2e-15 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 2e-15 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 6e-15 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 9e-15 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 9e-15 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 2e-14 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 6e-14 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 4e-13 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 6e-13 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-12 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 4e-12 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-12 | |
| TIGR03589 | 324 | TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd | 9e-12 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 3e-11 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 4e-11 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 1e-10 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-10 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-10 | |
| TIGR01472 | 343 | TIGR01472, gmd, GDP-mannose 4,6-dehydratase | 4e-10 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 4e-10 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 5e-10 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-09 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 3e-09 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 4e-09 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 5e-09 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 6e-09 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 6e-09 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 8e-09 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-08 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 2e-08 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 4e-08 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-08 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 4e-07 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 2e-06 | |
| cd05261 | 248 | cd05261, CAPF_like_SDR_e, capsular polysaccharide | 2e-06 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 2e-06 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 4e-05 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 8e-05 | |
| PRK08125 | 660 | PRK08125, PRK08125, bifunctional UDP-glucuronic ac | 1e-04 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 2e-04 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 5e-04 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 5e-04 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 6e-04 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 6e-04 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 8e-04 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.001 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.001 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 0.003 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 1429 bits (3700), Expect = 0.0
Identities = 573/664 (86%), Positives = 613/664 (92%), Gaps = 3/664 (0%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
Y PKNILITGAAGFIASHV NRLI NYP+YKIVVLDKLDYCSNLKNLNPS+ SPNFKF+K
Sbjct: 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVK 63
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ASADLV+++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK+TGQ
Sbjct: 64 GDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
I+RFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT
Sbjct: 124 IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TRGNNVYGPNQFPEKLIPKFILLAM+GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHKGE
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
VGHVYNIGTKKERRVIDVA DICKLF L+P+ IKFVENRPFNDQRYFLD QKLK+LGW
Sbjct: 244 VGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQ 303
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKINNS 364
ER +WEEGL+KTM+WY SNPDWWGDVSGALLPHPR M P + + ++
Sbjct: 304 ERTSWEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGVRLFDGSEEIK---LSSSG 360
Query: 365 SQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQL 424
SQ+ +VV + SS KP LKFLIYGRTGWIGGLL K+CEK+GI +EYGKGRLE+RS L
Sbjct: 361 SQTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSL 420
Query: 425 LADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA 484
LADI+NVKPTHVFNAAGVTGRPNVDWCE+HK ETIR NVVGTLTLADVCRENGLLMMN+A
Sbjct: 421 LADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFA 480
Query: 485 TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISS 544
TGCIFEYDAKHPEG+GIGFKEEDKPNFTGSFYSKTKAMVEELL+EYDNVCTLRVRMPISS
Sbjct: 481 TGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNVCTLRVRMPISS 540
Query: 545 DLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEI 604
DL+NPRNFITKISRYNKVVNIPNSMT+LDELLPIS+EMAKRNL GIWNFTNPGVVSHNEI
Sbjct: 541 DLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEI 600
Query: 605 LEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFE 664
LEMYK YIDPGFKW+NFTLEEQAKVIVAPRSNNE+DASKLKKEFPELLSIKESLIK VFE
Sbjct: 601 LEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYVFE 660
Query: 665 PNKK 668
PNKK
Sbjct: 661 PNKK 664
|
Length = 668 |
| >gnl|CDD|178377 PLN02778, PLN02778, 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Score = 582 bits (1503), Expect = 0.0
Identities = 242/293 (82%), Positives = 262/293 (89%)
Query: 376 SNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTH 435
SN + LKFLIYG+TGWIGGLL K+C+++GI F YG GRLENR+ L ADI VKPTH
Sbjct: 1 SNGTAGSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTH 60
Query: 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKH 495
VFNAAGVTGRPNVDWCE+HK ETIR NVVGTLTLADVCRE GL++ NYATGCIFEYD H
Sbjct: 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAH 120
Query: 496 PEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITK 555
P G+GIGFKEED PNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL+NPRNFITK
Sbjct: 121 PLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITK 180
Query: 556 ISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPG 615
I+RY KVVNIPNSMTILDELLPIS+EMAKRNL+GI+NFTNPGVVSHNEILEMY+ YIDP
Sbjct: 181 ITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPS 240
Query: 616 FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVFEPNKK 668
F W NFTLEEQAKVIVAPRSNNELD +KLK+EFPELL IKESLIK VFEPNKK
Sbjct: 241 FTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNKK 293
|
Length = 298 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 495 bits (1277), Expect = e-173
Identities = 158/319 (49%), Positives = 218/319 (68%), Gaps = 5/319 (1%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
IL+TG AGFI S+ L+ YP+YKI+ LDKL Y NL+NL SP ++F+KGD+
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A+LV + EKID ++HFAA++HVD S + F + N+ GT+ LLEA + G KR
Sbjct: 61 CDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGV-KR 119
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F+H+STDEVYG+ +D E S L PT+PYSA+KA A++LV AY R+YGLPV+ TR
Sbjct: 120 FVHISTDEVYGDLLDDG--EFTETSPLAPTSPYSASKAAADLLVRAYHRTYGLPVVITRC 177
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+N YGP QFPEKLIP FIL A+ GKPLPI+GDG NVR +LY ED A A + +L KG VG
Sbjct: 178 SNNYGPYQFPEKLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELVLEKGRVGE 237
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYER 306
+YNIG E +++ I +L ++ I +V++RP +D+RY +D K++ +LGW +
Sbjct: 238 IYNIGGGNELTNLELVKLILELLG-KDESLITYVKDRPGHDRRYAIDSSKIRRELGWRPK 296
Query: 307 VTWEEGLQKTMKWYISNPD 325
V++EEGL+KT++WY+ N
Sbjct: 297 VSFEEGLRKTVRWYLENRW 315
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 405 bits (1043), Expect = e-137
Identities = 142/327 (43%), Positives = 203/327 (62%), Gaps = 5/327 (1%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
IL+TG AGFI S+ ++ +P+ +V LDKL Y NL+NL SP ++F++GD+
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+LV + + D ++HFAA++HVD S F + N+ GT+ LLEA + R
Sbjct: 61 CDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F H+STDEVYG+ D E + P++PYSA+KA +++LV AY R+YGLP TR
Sbjct: 121 FHHISTDEVYGDLGLDDDAFT-ETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRC 179
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+N YGP QFPEKLIP I+ A+ GKPLP++GDG +R +LY ED A D +L KG++G
Sbjct: 180 SNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPD---TQIKFVENRPFNDQRYFLDVQKL-KQLGW 303
YNIG ER ++V IC+L + I FVE+RP +D+RY +D K+ ++LGW
Sbjct: 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGW 299
Query: 304 YERVTWEEGLQKTMKWYISNPDWWGDV 330
+ T+E GL+KT+ WY+ N WW +
Sbjct: 300 RPQETFETGLRKTVDWYLDNEWWWEPL 326
|
Length = 340 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 367 bits (945), Expect = e-123
Identities = 146/321 (45%), Positives = 204/321 (63%), Gaps = 6/321 (1%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
IL+TG AGFI S+ ++ +P+ +++VLDKL Y NL+NL +P ++F+KGD+
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+LV + + D ++HFAA++HVD S F + N+ GT+ LLEA + RF
Sbjct: 61 DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120
Query: 129 IHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
H+STDEVYG+ DA E + L P++PYSA+KA ++ LV AY R+YGLP + TR
Sbjct: 121 HHISTDEVYGDLEKGDAFT---ETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRC 177
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+N YGP QFPEKLIP I A+ GKPLP++GDG VR +LY ED A +L KG VG
Sbjct: 178 SNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGE 237
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYER 306
YNIG ER ++V I +L + D I VE+RP +D+RY +D K+K +LGW +
Sbjct: 238 TYNIGGGNERTNLEVVETILELLGKDED-LITHVEDRPGHDRRYAIDASKIKRELGWAPK 296
Query: 307 VTWEEGLQKTMKWYISNPDWW 327
T+EEGL+KT++WY+ N WW
Sbjct: 297 YTFEEGLRKTVQWYLDNEWWW 317
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (691), Expect = 9e-85
Identities = 142/344 (41%), Positives = 200/344 (58%), Gaps = 25/344 (7%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ILITG AGFI S + +I + +VV+DKL Y NL +L P S F F K D+
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----IT 122
+ + + D +MH AA++HVD S F + NI GT+ LLEA + +T
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 123 GQIK---RFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
K RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
YGLP + T +N YGP FPEKLIP IL A+ GKPLP++G+G +R +LY ED A A
Sbjct: 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDTQ---------IKFVENRPFN 287
+ G+VG YNIG ER+ +DV IC+L L P+ I FV +RP +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGH 297
Query: 288 DQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV 330
D RY +D K+ ++LGW + T+E G++KT++WY++N WW V
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
|
Length = 355 |
| >gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 1e-83
Identities = 138/339 (40%), Positives = 198/339 (58%), Gaps = 23/339 (6%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICD 61
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQ 124
+ I + D +MH AA++HVD S F + NI GT+VLLEA + +
Sbjct: 62 RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDED 121
Query: 125 IK---RFIHVSTDEVYGETDE-DAVVGNH------EASQLLPTNPYSATKAGAEMLVMAY 174
K RF H+STDEVYG+ D V + E + P++PYSA+KA ++ LV A+
Sbjct: 122 KKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R+YGLP I T +N YGP FPEKLIP IL A++GKPLPI+G G +R +LY ED A
Sbjct: 182 LRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDT-----QIKFVENRPFND 288
A ++ +G+ G YNIG E++ +DV IC L + P QI +V +RP +D
Sbjct: 242 ALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHD 301
Query: 289 QRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDW 326
+RY +D K+ ++LGW + T+E G++KT++WY++N +W
Sbjct: 302 RRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTEW 340
|
Length = 352 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 227 bits (582), Expect = 3e-69
Identities = 116/317 (36%), Positives = 173/317 (54%), Gaps = 18/317 (5%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+L+TG AGFI SH+ RL+ ++++VLD L +NL + PN KFI+GD+
Sbjct: 1 RVLVTGGAGFIGSHLVERLLER--GHEVIVLDNLS-TGKKENLPEVK--PNVKFIEGDIR 55
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+LV F E +D + H AAQ V S + + + N+ GT LLEA + G +KRF
Sbjct: 56 DDELVEFAF--EGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKRF 112
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
++ S+ VYG+ +H + P +PY+ +K E+ + R YGLP ++ R
Sbjct: 113 VYASSSSVYGDPPYLPKDEDHPPN---PLSPYAVSKYAGELYCQVFARLYGLPTVSLRYF 169
Query: 189 NVYGPNQFPEK----LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
NVYGP Q P +IP FI A+KG+P I+GDG R + Y EDV EA G
Sbjct: 170 NVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGA 229
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
G VYNIGT K V ++A I ++ L + + + RP + + D+ K K+ LGW
Sbjct: 230 GGEVYNIGTGKRTSVNELAELIREI--LGKELEPVYAPPRPGDVRHSLADISKAKKLLGW 287
Query: 304 YERVTWEEGLQKTMKWY 320
+V++EEGL+ T++W+
Sbjct: 288 EPKVSFEEGLRLTVEWF 304
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 8e-62
Identities = 92/246 (37%), Positives = 135/246 (54%), Gaps = 16/246 (6%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG GFI SH+ RL+ E + L ++LN R+ +F +GD+
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYE-----VIVLGRRRRSESLNTGRI----RFHEGDLTD 51
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
D + +L + D ++H AAQ+ V SF + +F + N+ GT LLEA + G +KRF+
Sbjct: 52 PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFV 110
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
S+ EVYG+ + + E + L P +PY+A K AE LV AY R+YGL + R N
Sbjct: 111 FASSSEVYGDVADPPI---TEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFN 167
Query: 190 VYGP---NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
VYGP + F +IP I ++GKP+ + GDG+ R +LY +DVA A L + G
Sbjct: 168 VYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGG 227
Query: 247 HVYNIG 252
+YNIG
Sbjct: 228 EIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 207 bits (529), Expect = 1e-61
Identities = 107/328 (32%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
IL+TG AGFI SH+ RL+ + + LD L++ L +F+ D+
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAA--GHDVRGLD------RLRDGLDPLL-SGVEFVVLDL 51
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNS-FGNSFEFTKNNIYGTHVLLEACKITGQIK 126
DLV L D ++H AAQ+ V +S + EF N+ GT LLEA + G +K
Sbjct: 52 TDRDLVDE-LAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VK 109
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
RF+ S+ V + + + P NPY +K AE L+ AY R YGLPV+ R
Sbjct: 110 RFVFASSVSVVYGDPPPLPI-DEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILR 168
Query: 187 GNNVYGPNQFPEK---LIPKFILLAMKGKPLP-IHGDGSNVRSYLYCEDVAEAFDTILHK 242
NVYGP P+ ++ FI +KG+P+ I GDGS R ++Y +DVA+A L
Sbjct: 169 PFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228
Query: 243 GEVGHVYNIGT-KKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQRYFLDVQKLK 299
+ G V+NIG+ E V ++A + + I ++ R + LD+ K +
Sbjct: 229 PDGG-VFNIGSGTAEITVRELAEAVAEAVGS-KAPLIVYIPLGRRGDLREGKLLDISKAR 286
Query: 300 Q-LGWYERVTWEEGLQKTMKWYISNPDW 326
LGW +V+ EEGL T++W + +
Sbjct: 287 AALGWEPKVSLEEGLADTLEWLLKKLEL 314
|
Length = 314 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 1e-57
Identities = 107/324 (33%), Positives = 163/324 (50%), Gaps = 17/324 (5%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK-NLNPSRLSPNFKFIKGDV 67
N+L+TGA GFI SH+ RL+ +++ LD Y S L + + F FI GDV
Sbjct: 1 NVLVTGADGFIGSHLTERLLRE--GHEVRALD--IYNSFNSWGLLDNAVHDRFHFISGDV 56
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A V L +K D + H AA + S+ + + N++GT +LEA + KR
Sbjct: 57 RDASEV--EYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLY-RKR 113
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+H ST EVYG + + +H + P +PYSA+K GA+ L +YGRS+GLPV R
Sbjct: 114 VVHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIR 173
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-V 245
N YGP Q +IP I G+ L GDGS R + + +D A F IL E V
Sbjct: 174 PFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIEAV 233
Query: 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND-----QRYFLDVQKLK- 299
G + N G+ +E + + A ++ L I + ++R + +R D++K K
Sbjct: 234 GEIINNGSGEEISIGNPAVELIVE-ELGEMVLIVYDDHREYRPGYSEVERRIPDIRKAKR 292
Query: 300 QLGWYERVTWEEGLQKTMKWYISN 323
LGW + + +GL++T++W+
Sbjct: 293 LLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 7e-55
Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 44/298 (14%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR---------LENRSQLLADIQNVKPTHV 436
K LI G TG +G L ++ +++G G GR L + + I++ KP +
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEV-IGTGRSRASLFKLDLTDPDAVEEAIRDYKPDVI 59
Query: 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHP 496
N A T + R NV+ LA +E G +++ +T +F
Sbjct: 60 INCAAYTRVDKCESDPE---LAYRVNVLAPENLARAAKEVGARLIHISTDYVF------- 109
Query: 497 EGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISS---DLNNPRNF 552
+G +KEED PN Y K+K + E + LR N
Sbjct: 110 DGKKGPYKEEDAPNPLN-VYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVEWM 168
Query: 553 ITKI---SRYNKVVNIPNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMY 608
+ N V + S T +L +E+ +RN L+GI++ +N G +S E ++
Sbjct: 169 LRLAAERKEVNVVHDQIGSPTYAADLADAILELIERNSLTGIYHLSNSGPISKYEFAKLI 228
Query: 609 -------KAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEF-PELLSIKESL 658
I P + + +N+ LD SKL++ + KE+L
Sbjct: 229 ADALGLPDVEIKP-------ITSSEYPLPARRPANSSLDCSKLEELGGIKPPDWKEAL 279
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 7e-54
Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 49/246 (19%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG AGFI SH+ RL+ +++VV+D+LD
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERG--HEVVVIDRLDV------------------------- 33
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
++H AA V S+ N E + N+ GT LLEA + G +KRF+
Sbjct: 34 ---------------VVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFV 77
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+ S+ VYG + E + P +PY +K AE L+ +YG SYGLPV+ R N
Sbjct: 78 YASSASVYGSPEGLPEE---EETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLAN 134
Query: 190 VYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG-EVG 246
VYGP Q P + ++ FI A++GKPL + G G+ R +++ +DV A L E G
Sbjct: 135 VYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGG 194
Query: 247 HVYNIG 252
VYNIG
Sbjct: 195 GVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 1e-50
Identities = 101/330 (30%), Positives = 162/330 (49%), Gaps = 43/330 (13%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+C+RL+ + ++++ +D + +N+ PNF+FI+ DV
Sbjct: 1 KRILITGGAGFLGSHLCDRLLED--GHEVICVDNF-FTGRKRNIEHLIGHPNFEFIRHDV 57
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ L ++D I H A + N + K N+ GT +L K G R
Sbjct: 58 -----TEPLYL--EVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVG--AR 108
Query: 128 FIHVSTDEVYGETDEDAVV--------GNHEASQLLPTNP------YSATKAGAEMLVMA 173
+ ST EVYG D V GN NP Y K AE L MA
Sbjct: 109 VLLASTSEVYG----DPEVHPQPESYWGN--------VNPIGPRSCYDEGKRVAETLCMA 156
Query: 174 YGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
Y R +G+ V R N YGP P +++ FI+ A++G+P+ ++GDG+ RS+ Y D
Sbjct: 157 YHRQHGVDVRIARIFNTYGPRMHPNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSD 216
Query: 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY 291
+ E +++ G N+G +E ++++A + KL ++I F+ + +R
Sbjct: 217 LVEGLIRLMNSDYFGGPVNLGNPEEFTILELAELVKKL--TGSKSEIVFLPLPEDDPKRR 274
Query: 292 FLDVQKLK-QLGWYERVTWEEGLQKTMKWY 320
D+ K K LGW +V EEGL++T++++
Sbjct: 275 RPDISKAKELLGWEPKVPLEEGLRRTIEYF 304
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 1e-46
Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 32/321 (9%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-SPNFKFIKGDV 67
+LI G GFI SH+ + L+ P ++ V D+ ++ P L +IKGD
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGP--QVRVFDR--------SIPPYELPLGGVDYIKGDY 50
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVLLEACKITGQIK 126
+ + L IDT++H A+ T+ S N + N + T LLEAC G I
Sbjct: 51 ENRADLESAL--VGIDTVIHLASTTNPATSNKNPILDIQTN-VAPTVQLLEACAAAG-IG 106
Query: 127 RFIHVSTD-EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ I S+ VYG ++ + E+ LP + Y +K E + Y YGL
Sbjct: 107 KIIFASSGGTVYGVPEQLPIS---ESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVL 163
Query: 186 RGNNVYGPNQFPEK---LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
R +N YGP Q P+ +IP + ++G+P+ I GDG ++R Y+Y +D+ EA +L
Sbjct: 164 RISNPYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRS 223
Query: 243 GEVGHVYNIGTKKE---RRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
+ V+NIG+ +I + Q+ + R + + LD+ + +
Sbjct: 224 KGLEEVFNIGSGIGYSLAELIAEIEKVTGR-----SVQVIYTPARTTDVPKIVLDISRAR 278
Query: 300 -QLGWYERVTWEEGLQKTMKW 319
+LGW +++ E+GL+KT +W
Sbjct: 279 AELGWSPKISLEDGLEKTWQW 299
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 5e-46
Identities = 95/341 (27%), Positives = 145/341 (42%), Gaps = 36/341 (10%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL---DYCSNLKNLNPSRLSPNFKFIKGD 66
+LITG AGFI S++ + ++++ D L NL L +R +F+ GD
Sbjct: 3 VLITGGAGFIGSNLARFFLKQ--GWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + L E ID I+H AAQ V S + + N GT +LEA +
Sbjct: 61 IRNRN--DLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118
Query: 127 RFIHVSTDEVYG---------ETD-----EDAVVGNHEASQLLPTN----PYSATKAGAE 168
FI ST++VYG E + S+ P + Y A+K A+
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178
Query: 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMKGKPLPIHG-DGSNVR 224
V YGR +GL + R + GP QF + + F+ A+ GKPL I G G VR
Sbjct: 179 QYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQVR 238
Query: 225 SYLYCEDVAEAFDTILHKGE--VGHVYNIGTKKERRV-IDVATDICKLFSLNPDTQIKFV 281
L+ D+ + + G V+NIG +E V + +C+ +
Sbjct: 239 DVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLELIALCEEI-TGRKMESYKD 297
Query: 282 ENRPFNDQRYF-LDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
ENRP DQ ++ D++K+K+ GW E L + W
Sbjct: 298 ENRPG-DQIWYISDIRKIKEKPGWKPERDPREILAEIYAWI 337
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 2e-44
Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 40/340 (11%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN-FKFIKGD 66
+L+TG AG+I SH +L+ +++VVLD NL N + L FKF +GD
Sbjct: 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLD------NLSNGHKIALLKLQFKFYEGD 52
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ L+ + KID ++HFAA V S N ++ NN+ GT L+EA TG +K
Sbjct: 53 LLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VK 111
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+FI ST VYGE + E S L P NPY +K +E ++ ++ V+ R
Sbjct: 112 KFIFSSTAAVYGEPTTSPIS---ETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILR 168
Query: 187 GNNVYGPN------QFPEK---LIPKFILLAMKGK--PLPIHG------DGSNVRSYLYC 229
NV G Q LIP A GK L I G DG+ +R Y++
Sbjct: 169 YFNVAGACPDGTLGQRYPGATLLIP-VAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHV 227
Query: 230 EDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP 285
+D+A+ A L +G +++N+G+ V++V K+ D ++ R
Sbjct: 228 DDLADAHVLALKY-LKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGR--DIPVEIAPRRA 284
Query: 286 FNDQRYFLDVQKLKQ-LGWY-ERVTWEEGLQKTMKWYISN 323
+ D K +Q LGW E+ ++ W+
Sbjct: 285 GDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQR 324
|
Length = 329 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 8e-44
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 42/345 (12%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRL--SPNFKFI 63
IL+TGAAGFI HV RL+ ++V +D L+ Y LK L S FKF+
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLER--GDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFV 58
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
KGD+ + + + + D ++H AAQ V S N + +NI G LLE C+ G
Sbjct: 59 KGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG 118
Query: 124 QIKRFIHVSTDEVYGE------TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
+K ++ S+ VYG +++D V +H P + Y+ATK E++ Y
Sbjct: 119 -VKHLVYASSSSVYGLNTKMPFSEDDRV--DH------PISLYAATKKANELMAHTYSHL 169
Query: 178 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
YG+P R VYGP P+ + F ++GKP+ + DG+ R + Y +D+ E
Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVV 229
Query: 238 TILHKGEVGH------------------VYNIGTKKERRVIDVATDICKLFSLNPDTQIK 279
L + VYNIG +++D + K +L +
Sbjct: 230 RALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEK--ALGKKAKKN 287
Query: 280 FVENRPFNDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISN 323
++ + + + D+ KL + LG+ + + EEG+++ ++WY N
Sbjct: 288 YLPMQKGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWYKEN 332
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 97/347 (27%), Positives = 155/347 (44%), Gaps = 51/347 (14%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-----SPNFKFI 63
IL+TG AG+I SH +L+ + +++V+LD NL N + L F+
Sbjct: 1 KILVTGGAGYIGSHTVRQLLES--GHEVVILD------NLSNGSREALPRGERITPVTFV 52
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+GD+ +L+ + KID ++HFA V S ++ +NN+ GT LLEA + G
Sbjct: 53 EGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG 112
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-YGLPV 182
+K+FI S+ VYGE + E S L P NPY +K +E ++ ++
Sbjct: 113 -VKKFIFSSSAAVYGEPSSIPIS---EDSPLGPINPYGRSKLMSEQILRDLQKADPDWSY 168
Query: 183 ITTRGNNVYG----------PNQFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRS 225
+ R NV G P LIP +A+ K L I G DG+ VR
Sbjct: 169 VILRYFNVAGAHPSGDIGEDPPGITH-LIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRD 227
Query: 226 YLYCEDVAE----AFDTILHKGEVGHVYNIGTKKE---RRVIDVATDICKLFSLNPDTQI 278
Y++ D+A+ A + +L+ G HVYN+G + VI+ + D +
Sbjct: 228 YIHVMDLADAHLAALEYLLNGGGS-HVYNLGYGQGFSVLEVIEAFKKVS-----GKDFPV 281
Query: 279 KFVENRPFNDQRYFLDVQKLKQ-LGWY-ERVTWEEGLQKTMKWYISN 323
+ RP + D K+++ LGW + EE ++ +W N
Sbjct: 282 ELAPRRPGDPASLVADASKIRRELGWQPKYTDLEEIIKDAWRWESRN 328
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 2e-39
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 34/323 (10%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
IL+TG AGFI SH+ +RL+ ++VV+D L +N+ P + F+F+K D+
Sbjct: 1 RILVTGGAGFIGSHLVDRLLEE--GNEVVVVDNL-SSGRRENIEPEFENKAFRFVKRDLL 57
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + DT+ H AA V + + N+ T+ +LEA + G +KR
Sbjct: 58 DTAD---KVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRI 113
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
+ S+ VYGE V+ E LP + Y A+K AE L+ AY +G R
Sbjct: 114 VFASSSTVYGEAK---VIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFA 170
Query: 189 NVYGPNQ-------FPEKLIPKFILLAMKGKP--LPIHGDGSNVRSYLYCEDVAEAFDTI 239
N+ GP F KL K P L + GDG +SYLY D +A
Sbjct: 171 NIVGPRSTHGVIYDFINKL---------KRNPNELEVLGDGRQRKSYLYVSDCVDAMLLA 221
Query: 240 LHKGEVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKF---VENRPFNDQRYFLDV 295
K G +++N+G V ++A + + L P + K+ + LD+
Sbjct: 222 WEKSTEGVNIFNLGNDDTISVNEIAEIVIEELGLKP--RFKYSGGDRGWKGDVPYMRLDI 279
Query: 296 QKLKQLGWYERVTWEEGLQKTMK 318
+KLK LGW R EE ++KT++
Sbjct: 280 EKLKALGWKPRYNSEEAVRKTVR 302
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 1e-38
Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---SRLSP-NFKFIK 64
+L+TG AG+I SH L+ Y +VVLD NL N + R+ +F +
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEA--GYDVVVLD------NLSNGHREALPRIEKIRIEFYE 52
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ + + KID ++HFAA V S ++ NN+ GT LLEA + G
Sbjct: 53 GDIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHG- 111
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+K F+ S+ VYGE + + E + L PTNPY TK E ++ ++ GL +
Sbjct: 112 VKNFVFSSSAAVYGEPETVPI---TEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVI 168
Query: 185 TRGNNVYG--PN-------QFPEKLIPKFILLAMKGK--PLPIHG------DGSNVRSYL 227
R N G P+ Q P LIP ++L G+ L I G DG+ VR Y+
Sbjct: 169 LRYFNPAGAHPSGLIGEDPQIPNNLIP-YVLQVALGRREKLAIFGDDYPTPDGTCVRDYI 227
Query: 228 YCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN 283
+ D+A+ A + + + G +YN+GT + V++V K+ +
Sbjct: 228 HVVDLADAHVLALEKLENGGGS-EIYNLGTGRGYSVLEVVEAFEKVS--GKPIPYEIAPR 284
Query: 284 RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
R + D K ++ LGW + E+ + W
Sbjct: 285 RAGDPASLVADPSKAREELGWKPKRDLEDMCEDAWNWQ 322
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 3e-36
Identities = 91/307 (29%), Positives = 135/307 (43%), Gaps = 28/307 (9%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-------LDYCSNLKNLNPSRLSPNFKF 62
+L+TGA GFI SH+ L+ E + VL LD P + +
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTS-------PPEVKDKIEV 53
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
+ GD+ D V + + D + H AA + S+ + N+ GT +L+A +
Sbjct: 54 VTGDIRDPDSVRKAM--KGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDL 111
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
G +++ +H ST EVYG V E L +PYSA+K GA+ L +++ RS+ PV
Sbjct: 112 G-VEKVVHTSTSEVYGTAQ---YVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPV 167
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-H 241
R N YGP Q +IP I GK G S R + Y D F I
Sbjct: 168 TIIRPFNTYGPRQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAES 227
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQ--RYFLDVQK 297
VG V NIG+ E + D I ++ + + +I+ E RP + R + D K
Sbjct: 228 DKTVGEVINIGSNFEISIGDTVKLIAEI--MGSEVEIETDEERLRPEKSEVERLWCDNSK 285
Query: 298 LKQL-GW 303
+K+L GW
Sbjct: 286 IKELTGW 292
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 5e-33
Identities = 82/323 (25%), Positives = 126/323 (39%), Gaps = 38/323 (11%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL------SPNFKF 62
LITG G S++ L+ Y++ + + N R+
Sbjct: 1 RALITGITGQDGSYLAEFLLEK--GYEVHGI-----VRRSSSFNTDRIDHLYINKDRITL 53
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GD+ + + + + D I H AAQ+HV SF + + N GT LLEA +I
Sbjct: 54 HYGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRIL 113
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
G RF S+ E YG+ E + E + P +PY+ +K A+ + Y +YGL
Sbjct: 114 GLDARFYQASSSEEYGKVQE---LPQSETTPFRPRSPYAVSKLYADWITRNYREAYGLFA 170
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMK---GKPLPIH-GDGSNVRSYLYCEDVAEAFDT 238
+ R N GP + + K + G + G+ R + D EA+
Sbjct: 171 VNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVEAYWL 230
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFL----- 293
+L +GE Y I T + V + F + T VE D RYF
Sbjct: 231 LLQQGE-PDDYVIATGETHSVREFVE---LAFEESGLTGDIEVE----IDPRYFRPTEVD 282
Query: 294 ----DVQKLKQ-LGWYERVTWEE 311
D K ++ LGW V++EE
Sbjct: 283 LLLGDPSKAREELGWKPEVSFEE 305
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLD----KLDYCSNLKNLNPSRLSPNFKFI 63
K IL+TG AG I S + R I + K++V D KL ++ L +FI
Sbjct: 3 KTILVTGGAGSIGSELV-RQILKFGPKKLIVFDRDENKLH--ELVRELRSRFPHDKLRFI 59
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GDV + + D + H AA HV + N E K N+ GT +++A I
Sbjct: 60 IGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAA-IEN 118
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPV 182
+++F+ +STD+ AV N P N ATK AE L++A
Sbjct: 119 GVEKFVCISTDK--------AV--N-------PVNVMGATKRVAEKLLLAKNEYSSSTKF 161
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI-HGDGSNVRSYLYCEDVAEAFDTILH 241
T R NV G ++P F KG PL + D + + + EA D +L
Sbjct: 162 STVRFGNVLGSRG---SVLPLFKKQIKKGGPLTVTDPD---MTRFFM--TIPEAVDLVLQ 213
Query: 242 KGEVGH---VYNIGTKKERRVIDVATDICKLFSLNP--DTQIKFVENRP 285
+G ++ + +++D+A + +L P D I F RP
Sbjct: 214 ACILGDGGGIFLLDMGPPVKILDLAEALIELLGYEPYEDIPIFFTGLRP 262
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 5e-29
Identities = 78/292 (26%), Positives = 119/292 (40%), Gaps = 44/292 (15%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL----KNLNPSRLSPNFKFI 63
K +L+TG G I S +C +++ P+ +I++ + +Y L L +F
Sbjct: 251 KTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEY--KLYLIDMELREKFPELKLRFY 307
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GDV D V + K+D + H AA HV N E K N+ GT + EA G
Sbjct: 308 IGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG 367
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP-- 181
+K+F+ +STD+ + PTN ATK AE L A R+
Sbjct: 368 -VKKFVLISTDKA-----------------VNPTNVMGATKRLAEKLFQAANRNVSGTGT 409
Query: 182 -VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
R NV G +IP F +G PL + D R + + EA +L
Sbjct: 410 RFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV-TDPDMTR---FFMTIPEAVQLVL 462
Query: 241 HKGEVGH-----VYNIGTKKERRVIDVATDICKLFSLNPDTQ--IKFVENRP 285
G + V ++G + ++ID+A + +L P IK + RP
Sbjct: 463 QAGAIAKGGEIFVLDMG--EPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRP 512
|
Length = 588 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 43/340 (12%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +L+TG GF S + L + LD + + N +GD+
Sbjct: 5 KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNK---ISSTRGDI 61
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + + + + + H AAQ V S+ + E + N+ GT LLEA + TG +K
Sbjct: 62 RDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKA 121
Query: 128 FIHVSTDEVYGETD------EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
++V++D+ Y + E+ +G H+ PYS++K AE+++ +Y S+ P
Sbjct: 122 VVNVTSDKCYENKEWGWGYRENDPLGGHD--------PYSSSKGCAELIISSYRNSFFNP 173
Query: 182 ---------VITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
+ + R NV G + E +++P I G+ + I + +R + + +
Sbjct: 174 ENYGKHGIAIASARAGNVIGGGDWAEDRIVPDCIRAFEAGERVIIRNPNA-IRPWQHVLE 232
Query: 232 -------VAEAFDTILHKGEVGHVYNIGTKKE--RRVIDVATDICKLFSLNPDTQIKFVE 282
+AE E +N G E V+++ + + + + +
Sbjct: 233 PLSGYLLLAEKL--YERGEEYAEAWNFGPDDEDAVTVLELVEAMARYWGEDARWDLD--G 288
Query: 283 NRPFNDQRYF-LDVQKLK-QLGWYERVTWEEGLQKTMKWY 320
N ++ LD K K LGW R EE L+ T+ WY
Sbjct: 289 NSHPHEANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWY 328
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 6e-27
Identities = 75/289 (25%), Positives = 114/289 (39%), Gaps = 50/289 (17%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD----KLDYCSNLKNLNPSRLSPNFKFIKG 65
+L+TG G I S +C +++ P+ KI++ KL + L P +F G
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPK-KIILFSRDEFKLY--EIRQELRQEYNDPKLRFFIG 57
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
DV + + + +DT+ H AA HV N E K N+ GT + EA I +
Sbjct: 58 DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPMEAIKTNVLGTENVAEAA-IENGV 116
Query: 126 KRFIHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP--- 181
++F+ +STD+ V PTN ATK AE L A R G
Sbjct: 117 EKFVLISTDKAVN------------------PTNVMGATKRLAEKLFQAANRESGSGKTR 158
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R NV G +IP F G P+ + R + + EA +L
Sbjct: 159 FSVVRFGNVLGSRG---SVIPLFKKQIANGGPVTV-THPDMTR---FFMTIPEAVQLVLQ 211
Query: 242 KGEVGH-----VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP 285
G +G V ++G +++D+A + D +IK RP
Sbjct: 212 AGAMGKGGEIFVLDMG--PPVKIVDLAKA------MIGDIEIKITGLRP 252
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-25
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 28/313 (8%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+++TG AGF+ SH+ +RL+ ++V+D + +N+ +PNF+ I+ DV
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGD--SVIVVDNF-FTGRKENVMHHFSNPNFELIRHDV-- 176
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
V ILL ++D I H A + N + K N+ GT +L K G RF+
Sbjct: 177 ---VEPILL--EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFL 229
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 183
ST EVYG+ + V + + NP Y K AE L M Y R + V
Sbjct: 230 LTSTSEVYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANVEVR 285
Query: 184 TTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R N YGP + +++ F+ A++ +PL ++GDG RS+ + D+ E ++
Sbjct: 286 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 345
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ- 300
VG +N+G E ++++A + + +++P+ +I+F N + + D+ K K+
Sbjct: 346 GEHVGP-FNLGNPGEFTMLELAKVVQE--TIDPNAKIEFRPNTEDDPHKRKPDITKAKEL 402
Query: 301 LGWYERVTWEEGL 313
LGW +V+ +GL
Sbjct: 403 LGWEPKVSLRQGL 415
|
Length = 442 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-25
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 36/317 (11%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I++TG AGF+ SH+ ++LIG E ++V+D + +NL +P F+ I+ DV
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDE--VIVIDNF-FTGRKENLVHLFGNPRFELIRHDV-- 177
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
V ILL ++D I H A + N + K N+ GT +L K G RF+
Sbjct: 178 ---VEPILL--EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFL 230
Query: 130 HVSTDEVYGETDE----DAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYG 179
ST EVYG+ E + GN NP Y K AE L M Y R G
Sbjct: 231 LTSTSEVYGDPLEHPQKETYWGN--------VNPIGERSCYDEGKRTAETLAMDYHRGAG 282
Query: 180 LPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
+ V R N YGP + +++ F+ ++ +P+ ++GDG RS+ Y D+ +
Sbjct: 283 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLV 342
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297
++ VG +N+G E ++++A + + +++ I+F N + + D+ K
Sbjct: 343 ALMEGEHVGP-FNLGNPGEFTMLELAEVVKE--TIDSSATIEFKPNTADDPHKRKPDISK 399
Query: 298 LK-QLGWYERVTWEEGL 313
K L W +++ EGL
Sbjct: 400 AKELLNWEPKISLREGL 416
|
Length = 436 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 4e-24
Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 49/330 (14%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG G + S + VL + Y N+ L D+
Sbjct: 2 ILVTGHRGLVGSAIVR------------VLARRGYE-NVVFRTSKEL---------DLTD 39
Query: 70 ADLVHFILLTEKIDTIMHFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ V EK D ++H AA+ + ++ F N + +V+ A G +K
Sbjct: 40 QEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADF-LRDNLLINDNVI-HAAHRFG-VK 96
Query: 127 RFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTN-PYSATKAGAEMLVMAYGRSYGL 180
+ + + + +Y + DE ++ PTN Y+ K L AY + YG
Sbjct: 97 KLVFLGSSCIYPDLAPQPIDESDLL----TGPPEPTNEGYAIAKRAGLKLCEAYRKQYGC 152
Query: 181 PVITTRGNNVYGPN-QFPEK-------LIPKFILLAMKG-KPLPIHGDGSNVRSYLYCED 231
I+ N+YGP+ F + LI KF ++G K + + G G+ R +LY +D
Sbjct: 153 DYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDD 212
Query: 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY 291
+A A +L + + N+G+ E + ++A I ++ + I F ++P R
Sbjct: 213 LARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEVVGFKGE--IVFDTSKPDGQPRK 270
Query: 292 FLDVQKLKQLGWYERVTWEEGLQKTMKWYI 321
LDV KL+ LGW+ E+G+++T +WY+
Sbjct: 271 LLDVSKLRALGWFPFTPLEQGIRETYEWYL 300
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 5e-24
Identities = 95/347 (27%), Positives = 155/347 (44%), Gaps = 36/347 (10%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNF-KFIKG 65
+L+TG +G+I SH C +L+ N + +V+LD L C++ +++ P RL F++G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEG 57
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ + L+ IL IDT++HFA V S E+ NN+ GT L+ A + +
Sbjct: 58 DIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-V 116
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-------- 177
K I S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 117 KNLIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPDWSIAL 174
Query: 178 --YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVRSYL 227
Y PV G+ P P L+P +A+ + L I G DG+ VR Y+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI 234
Query: 228 YCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN 283
+ D+A+ A + + +K V H+YN+G V+DV K + F
Sbjct: 235 HVMDLADGHVAAMEKLANKPGV-HIYNLGAGVGSSVLDVVNAFSK--ACGKPVNYHFAPR 291
Query: 284 RPFNDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGD 329
R + Y+ D K ++L W T +E Q T W +P + D
Sbjct: 292 REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
Length = 338 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 85/331 (25%), Positives = 132/331 (39%), Gaps = 51/331 (15%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+L+TGA GFI + ++L+ E +I V N +N PS + + D
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIAV-------RNAENAEPSVVL--AELPDIDSF 51
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ L +D ++H AA+ HV D ++ K N T L A G +K
Sbjct: 52 TD-------LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG-VK 103
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
RF+ +S+ +V GE A E P + Y +K AE ++ G S G+ V+ R
Sbjct: 104 RFVFLSSVKVNGEGTVGAPF--DETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILR 161
Query: 187 GNNVYGP----NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT-ILH 241
VYGP N + + L +G PLP G N RS + +++ +A I
Sbjct: 162 PPMVYGPGVRGN------FARLMRLIDRGLPLPP-GAVKNRRSLVSLDNLVDAIYLCISL 214
Query: 242 KGEVGHVY------NIGTKKERRVIDVATDICKLFSLNPDTQIKF---------VENRPF 286
+ + T + I A P ++F V R F
Sbjct: 215 PKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKLLGKRAVIQRLF 274
Query: 287 NDQRYFLDVQKLKQ-LGWYERVTWEEGLQKT 316
+Y D +K + LGW ++ EEGLQ+T
Sbjct: 275 GSLQY--DPEKTQNELGWRPPISLEEGLQET 303
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 43/336 (12%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I++TG AGFI S++ L I+V+D L KNL +++ +I D
Sbjct: 2 IIVTGGAGFIGSNLVKAL-NERGITDILVVDNLSNGEKFKNLVGLKIA---DYIDKDDFK 57
Query: 70 ADLVHFILLTEKIDTIMHFAA---QTHVDNSF--GNSFEFTKNNIYGTHVLLEACKITGQ 124
+ KI+ I H A T D + N++++TK LL C
Sbjct: 58 DWVRKGDEN-FKIEAIFHQGACSDTTETDGKYMMDNNYQYTKE-------LLHYCLEKKI 109
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
RFI+ S+ VYG + E L P N Y +K + +G+ V+
Sbjct: 110 --RFIYASSAAVYGNGSLG-FAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQVVG 166
Query: 185 TRGNNVYGPNQFPEK----LIPKFILLAMKGKPLPI------HGDGSNVRSYLYCEDVAE 234
R NVYGP ++ + ++ G+ + + + DG +R ++Y +DV +
Sbjct: 167 LRYFNVYGPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDVVK 226
Query: 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ----- 289
L V ++N+GT + R D+A+ K I+++ F +
Sbjct: 227 VNLFFLENPSVSGIFNVGTGRARSFNDLASATFKALGKEVK--IEYI---DFPEDLRGKY 281
Query: 290 RYFL--DVQKLKQLGWYERVTW-EEGLQKTMKWYIS 322
+ F D+ KL+ G+ + EEG++ +K Y++
Sbjct: 282 QSFTEADISKLRAAGYTKEFHSLEEGVKDYVKNYLA 317
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 81/347 (23%), Positives = 132/347 (38%), Gaps = 51/347 (14%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
++L+TG +GF + +L+ Y + D L PN +F+KGD+
Sbjct: 1 SVLVTGGSGFFGERLVKQLLERGGTY-VRSFDIAPPGEALSAWQH----PNIEFLKGDIT 55
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V L D + H AA G + + N+ GT +L+AC+ G +++F
Sbjct: 56 DRNDVEQAL--SGADCVFHTAAIVP---LAGPRDLYWEVNVGGTQNVLDACQRCG-VQKF 109
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPT--NPYSATKAGAEMLVMAYGRSYGLPVITTR 186
++ S+ V + E P + Y+ TKA AE++V+ L R
Sbjct: 110 VYTSSSSVIFGGQN--IHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALR 167
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI---LHKG 243
++GP + L+P A KG + G G+N+ + Y ++A A L KG
Sbjct: 168 PAGIFGPGD--QGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKG 225
Query: 244 E--VGHVYNIG----------------------TKKER------RVIDVATDICKLFSLN 273
+ G Y I K R + +++ F L
Sbjct: 226 KTISGQTYFITDAEPHNMFELLRPVWKALGFGSRPKIRLSGPLAYCAALLSELV-SFMLG 284
Query: 274 PDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWY 320
P R YF + K LG+ R + EEGL +T+ WY
Sbjct: 285 PYFVFSPFYVRALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLNWY 331
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 7e-23
Identities = 83/341 (24%), Positives = 128/341 (37%), Gaps = 51/341 (14%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD- 66
+ L+TGA GFI SH+ RL + + D + ++ + + +F D
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAE--GHYVRGAD------WKSPEHMTQPTDDDEFHLVDL 52
Query: 67 --VASADLVHFILLTEKIDTIMHFAA---------QTHVDNSFGNSFEFTKNNIYGTHVL 115
+ + TE +D + H AA H + N+ N +
Sbjct: 53 REMENCLKA-----TEGVDHVFHLAADMGGMGYIQSNHAVIMYNNT---LINFN-----M 99
Query: 116 LEACKITGQIKRFIHVSTDEVYGET--DEDAVVGNHEASQLLPTNP---YSATKAGAEML 170
LEA +I G ++RF+ S+ VY E E VV E P P Y K E L
Sbjct: 100 LEAARING-VERFLFASSACVYPEFKQLETTVVRLRE-EDAWPAEPQDAYGWEKLATERL 157
Query: 171 VMAYGRSYGLPVITTRGNNVYGP----NQFPEKLIPKF---ILLAMKGKPLPIHGDGSNV 223
Y YG+ R +N+YGP + EK + A G I GDG
Sbjct: 158 CQHYNEDYGIETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQT 217
Query: 224 RSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN 283
RS+ Y +D E ++ + + G N+G+ + + ++A + +I
Sbjct: 218 RSFTYIDDCVEGLRRLM-ESDFGEPVNLGSDEMVSMNELAEMVLSF--SGKPLEIIHHTP 274
Query: 284 RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
P + D LK+ LGW EEGL+ T W
Sbjct: 275 GPQGVRGRNSDNTLLKEELGWEPNTPLEEGLRITYFWIKEQ 315
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 3e-22
Identities = 94/348 (27%), Positives = 145/348 (41%), Gaps = 42/348 (12%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-----KNLNPSRLSPNFKF 62
+ IL+TG AG+I SH +L+ YK+VV+D LD S K L N F
Sbjct: 6 RTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDL-GDNLVF 62
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
K D+ + + + + + D ++HFA V S + NN+ GT LLE
Sbjct: 63 HKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH 122
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLP 181
G K+ + S+ VYG+ +E E L TNPY TK E + +
Sbjct: 123 G-CKKLVFSSSATVYGQPEEVPCT---EEFPLSATNPYGRTKLFIEEICRDIHASDPEWK 178
Query: 182 VITTRGNNVYG----------PNQFPEKLIPKFILLAMKGKP-LPIHG------DGSNVR 224
+I R N G P P L+P +A+ +P L + G DG+ VR
Sbjct: 179 IILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR 238
Query: 225 SYLYCEDVAE----AFDTILHKGEVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQI- 278
Y++ D+A+ A + ++G YN+GT K V+ ++ F +I
Sbjct: 239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVL----EMVAAFEKASGKKIP 294
Query: 279 -KFVENRPFNDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNP 324
K RP + + + +K K+LGW + +E + W NP
Sbjct: 295 LKLAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342
|
Length = 352 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 6e-22
Identities = 87/358 (24%), Positives = 147/358 (41%), Gaps = 69/358 (19%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+ L+ G +GF+ H+ +L+ + V D L+PS S +F GD+
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRG-NPTVHVFDIRP----TFELDPSS-SGRVQFHTGDLT 54
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ + + + H A+ H S N + K N+ GT ++EAC+ G +K+
Sbjct: 55 DPQDLEKAFNEKGPNVVFHTASPDH--GS--NDDLYYKVNVQGTRNVIEACRKCG-VKKL 109
Query: 129 IHVST-DEVYGETDEDAVVGNHEASQ---LLPTNPYSATKAGAEMLVM-AYGRSYGLPVI 183
++ S+ V+ D + N + S + Y+ TKA AE LV+ A GL
Sbjct: 110 VYTSSASVVFNGQD----IINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTC 165
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA-------EAF 236
R ++GP +L+P + A GK GDG+N+ + Y E+VA +A
Sbjct: 166 ALRPAGIFGPGD--RQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADAL 223
Query: 237 DTILHK----GEV----------------------GHVYNIGTKKERRVI----DVATDI 266
+ H GE G+ K R V +
Sbjct: 224 LSSSHAETVAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEWT 283
Query: 267 CKLFSLNP-DT--QIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
CK+ P T ++ + RYF +++K K+ LG+ VT EEG+++T++W+
Sbjct: 284 CKVLGKEPTFTPFRVALL-----CSTRYF-NIEKAKKRLGYTPVVTLEEGIERTLQWF 335
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 94.8 bits (235), Expect = 6e-21
Identities = 92/335 (27%), Positives = 147/335 (43%), Gaps = 25/335 (7%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLKNLNPSRLSPN-- 59
V PK LITG AGFI S + L+ + ++ LD Y NL ++ S
Sbjct: 12 VLAPKRWLITGVAGFIGSGLLEELL--FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWS 69
Query: 60 -FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 118
F FI+GD+ + +D ++H AA V S + NI G +L A
Sbjct: 70 RFIFIQGDIRK--FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTA 127
Query: 119 CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
+ + F + ++ YG+ + + E P +PY+ TK E+ + RSY
Sbjct: 128 AR-DAHVSSFTYAASSSTYGDHPDLPKI---EERIGRPLSPYAVTKYVNELYADVFARSY 183
Query: 179 GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
I R NV+G Q P +IP++IL +K +P+ I+GDGS R + Y E+V +
Sbjct: 184 EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ 243
Query: 235 A---FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIK----FVENRPFN 287
A T VYN+ + ++ I +L + Q + + + R +
Sbjct: 244 ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD 303
Query: 288 DQRYFLDVQKLKQLGWYE-RVTWEEGLQKTMKWYI 321
+ D+ K+K YE +EGL++T+KWYI
Sbjct: 304 VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI 338
|
Length = 348 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 6e-21
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 25/247 (10%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TGA GF+ S++ L+ + +V D L + ++GD+
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDA-VLLDG-------LPVEVVEGDLTD 52
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF--EFTKNNIYGTHVLLEACKITGQIKR 127
A + + + D + H AA T S E + N+ GT +L+A G ++R
Sbjct: 53 AASLAAAM--KGCDRVFHLAAFT----SLWAKDRKELYRTNVEGTRNVLDAALEAG-VRR 105
Query: 128 FIHVSTDEVYGETDEDAV--VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+H S+ G + + N Y +K AE+ V+ GL V+
Sbjct: 106 VVHTSSIAALGGPPDGRIDETTPWNERPFP--NDYYRSKLLAELEVLEAAAE-GLDVVIV 162
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245
+ V+GP +L + GK LP + G S++ DVAE + KG
Sbjct: 163 NPSAVFGPGDEGPTSTGLDVLDYLNGK-LPAYPPGG--TSFVDVRDVAEGHIAAMEKGRR 219
Query: 246 GHVYNIG 252
G Y +G
Sbjct: 220 GERYILG 226
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 78/321 (24%), Positives = 119/321 (37%), Gaps = 58/321 (18%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITGA G + + L Y+++ + K D+
Sbjct: 1 KILITGATGMLGRALVRLLKERG--YEVIGTGR----------------SRASLFKLDLT 42
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
D V + K D I++ AA T VD + + N+ L A K G R
Sbjct: 43 DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVG--ARL 100
Query: 129 IHVSTDEV-------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
IH+STD V Y E D P N Y +K E+ V+ Y
Sbjct: 101 IHISTDYVFDGKKGPYKEEDAPN-----------PLNVYGKSKLLGEVAVLNANPRY--- 146
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA-FDTIL 240
+ R + +YG + E + + LA + K + + D + S Y D+A+A + I
Sbjct: 147 -LILRTSWLYGELKNGENFVEWMLRLAAERKEVNVVHDQ--IGSPTYAADLADAILELIE 203
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--------RPFNDQRYF 292
G +Y++ + A I L PD +IK + + RP N
Sbjct: 204 RNSLTG-IYHLSNSGPISKYEFAKLIADALGL-PDVEIKPITSSEYPLPARRPANSS--- 258
Query: 293 LDVQKLKQLGWYERVTWEEGL 313
LD KL++LG + W+E L
Sbjct: 259 LDCSKLEELGGIKPPDWKEAL 279
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 3e-19
Identities = 84/337 (24%), Positives = 138/337 (40%), Gaps = 47/337 (13%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I++TG AGFI S++ L I+V+D L NL I +
Sbjct: 1 IIVTGGAGFIGSNLVKALNERG-ITDILVVDNLRDGHKFLNLADLV-------IADYIDK 52
Query: 70 ADLVHFILLTE--KIDTIMHFAA---QTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D + + KI+ I H A T D + +NN + LL+ C +
Sbjct: 53 EDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEY-----MMENNYQYSKRLLDWC--AEK 105
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLP-- 181
FI+ S+ YG D G E +L P N Y +K + V L
Sbjct: 106 GIPFIYASSAATYG----DGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQ 161
Query: 182 VITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPL------PIHGDGSNVRSYLYCED 231
V+ R NVYGP ++ + + G + DG +R ++Y +D
Sbjct: 162 VVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD 221
Query: 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ-- 289
V + +L G G ++N+GT + R D+A + K +L D +I+++ P +
Sbjct: 222 VVDVNLWLLENGVSG-IFNLGTGRARSFNDLADAVFK--ALGKDEKIEYIPM-PEALRGR 277
Query: 290 -RYFL--DVQKLKQLGWY-ERVTWEEGLQKTMKWYIS 322
+YF D+ KL+ G+Y T EEG++ ++W ++
Sbjct: 278 YQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLLA 314
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 8e-19
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 38/297 (12%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLS-PNFKFIKGDV 67
+ +TG GF+ H+ RL+ N +K++VL + + + L + ++GD+
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN--GFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDL 58
Query: 68 ASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+L L K+D ++H AA + + NI GT +LE
Sbjct: 59 TQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNE---DAWRTNIDGTEHVLELAARLD 115
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
I+RF +VST V G + + Q NPY +KA AE LV A L V
Sbjct: 116 -IQRFHYVSTAYVAGNREGNIRETELNPGQNFK-NPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 184 ----------TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
T R + G + LLA G+ LP+ G+ + + + VA
Sbjct: 174 RPSIVVGDSKTGRIEKIDGLYEL-------LNLLAKLGRWLPMPGNKGARLNLVPVDYVA 226
Query: 234 EAFDTILHKGEV-GHVYNI--GTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN 287
+A + K E G ++++ T + R I D+ K L+P + + N
Sbjct: 227 DAIVYLSKKPEANGQIFHLTDPTPQTLREI---ADLFKSAFLSP--GLLVLLMNEPN 278
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 39/208 (18%)
Query: 12 ITGAAGFIASHVCNRLIGNYPEYKIVVL----------DKLDY-CSNLKNLNPSRLSPNF 60
+TGA GF+ + +L+ + PE KI L ++L + +
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60
Query: 61 KFIKGDVASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 115
+ GD++ +L F L E++D I+H AA + F + + N+ GT +
Sbjct: 61 IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVN----FVEPYSDLRATNVLGTREV 116
Query: 116 LEACKITGQIKRFIHVST-----------DEVYGETDEDAVVGNHEASQLLPTNPYSATK 164
L K + F HVST +E + DED A N Y+ +K
Sbjct: 117 LRLAK-QMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDE-----PALLGGLPNGYTQSK 170
Query: 165 AGAEMLVMAYGRSYGLPVITTRGNNVYG 192
AE LV GLPV+ R + + G
Sbjct: 171 WLAEQLVREAAG--GLPVVIYRPSIITG 196
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 3e-18
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TG GF+ H+ L+ ++ V D L++ + + +I+GDV
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQ---VITYIEGDVTDK 57
Query: 71 DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-----NIYGTHVLLEACKITGQI 125
+ L + D ++H AA V FG + ++ N+ GT +L+AC G +
Sbjct: 58 QDLRRAL--QGSDVVIHTAAIIDV---FG---KAYRDTIMKVNVKGTQNVLDACVKAG-V 108
Query: 126 KRFIHVSTDEVYGETDE-DAVVGNHEAS--QLLPTNPYSATKAGAEMLVM-AYGRSY--G 179
+ ++ S+ EV G +V E + + +PY +KA AE LV+ A G + G
Sbjct: 109 RVLVYTSSMEVVGPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKNG 168
Query: 180 LPVITT--RGNNVYGP-NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
+ T R ++G + F L P + L G GD + + +Y +VA A
Sbjct: 169 GRLYTCALRPAGIFGEGDPF---LFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWAH 225
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 78/320 (24%), Positives = 120/320 (37%), Gaps = 61/320 (19%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITGA G + + + L E++++ D+ L D+
Sbjct: 2 KILITGANGQLGTELRRAL---PGEFEVIATDR-------AEL--------------DIT 37
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
D V ++ + D +++ AA T VD + N G L A G R
Sbjct: 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RL 95
Query: 129 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+H+STD V Y ETD P N Y +K E V A G +
Sbjct: 96 VHISTDYVFDGEKGGPYKETDTPN-----------PLNVYGRSKLAGEEAVRAAGPRH-- 142
Query: 181 PVITTRGNNVYG--PNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
+ R + VYG N F + + LA +GK L + D S Y ED+A+A
Sbjct: 143 --LILRTSWVYGEYGNNFVK----TMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILE 194
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNP-DTQIKFVENRPFNDQRYF---LD 294
+L K + G VY++ E + A I + ++ + P +R LD
Sbjct: 195 LLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLD 254
Query: 295 VQKLKQLGWYERVTWEEGLQ 314
+KL++ W E L+
Sbjct: 255 TKKLEKAFGLSLPEWREALK 274
|
Length = 281 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 2e-17
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 30/280 (10%)
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GD+ A + + K + + H AAQ V S+ + E + N+ GT LLEA +
Sbjct: 57 HFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI 116
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---- 178
G +K ++V++D+ Y DE V G E L +PYS++KA AE+++ +Y S+
Sbjct: 117 GSVKAVVNVTSDKCY-RNDE-WVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVA 174
Query: 179 ---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVR---------- 224
G+ + + R NV G + E +LIP I K + I + R
Sbjct: 175 NFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDA-TRPWQHVLEPLS 233
Query: 225 SYLYCEDVAEAFDTILHKGEVGHVYNIG--TKKERRVIDVATDICKLFSLNPDTQIKFVE 282
YL +AE + E +N G RV+++ D + + + +
Sbjct: 234 GYLL---LAEKL--FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD 288
Query: 283 NRPFNDQRYF-LDVQK-LKQLGWYERVTWEEGLQKTMKWY 320
++ R LD K LGW+ R EE + +T+ WY
Sbjct: 289 LNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWY 328
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 1e-15
Identities = 44/252 (17%), Positives = 72/252 (28%), Gaps = 76/252 (30%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+L+TG +G I + L + K++V+ + D
Sbjct: 1 VLVTGGSGGIGGAIARWLA-SRGSPKVLVVSRRDV------------------------- 34
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACKITGQI 125
++H AA + N+ GT LLEA + +
Sbjct: 35 ---------------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKA 79
Query: 126 K---RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G 179
K RFI +S+ Y+A+KA + L + G
Sbjct: 80 KRLGRFILISSVAGLFG--------------APGLGGYAASKAALDGLAQQWASEGWGNG 125
Query: 180 LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
LP G + P+ IL + + E+VA A
Sbjct: 126 LPATAVACGTWAGSGMAKGPVAPEEILG--NRRHG---------VRTMPPEEVARALLNA 174
Query: 240 LHKGEVGHVYNI 251
L + + G Y I
Sbjct: 175 LDRPKAGVCYII 186
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 38/323 (11%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+LITG AG I SH+ L+ +++VV+D ++L PN ++G +
Sbjct: 1 MKVLITGGAGQIGSHLIEHLLER--GHQVVVIDNFA-TGRREHLPD---HPNLTVVEGSI 54
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A LV + K D ++H AA + D + +E T N+ G +++A K G +KR
Sbjct: 55 ADKALVDKLFGDFKPDAVVHTAA-AYKDPD--DWYEDTLTNVVGGANVVQAAKKAG-VKR 110
Query: 128 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTNP----YSATK-AGAEMLVMAYGRSYGLP 181
I+ T YG + + + +H P P Y+ +K AG L ++ G+
Sbjct: 111 LIYFQTALCYGLKPMQQPIRLDH------PRAPPGSSYAISKTAGEYYLELS-----GVD 159
Query: 182 VITTRGNNVYGPNQF--PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
+T R NV GP P +P F GK + R +++ +D+A D
Sbjct: 160 FVTFRLANVTGPRNVIGP---LPTFYQRLKAGKKCFV---TDTRRDFVFVKDLARVVDKA 213
Query: 240 LHKGEVGH-VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL 298
L G GH Y+ + ++ + ++ + + L +++ VE P + LD +
Sbjct: 214 L-DGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVVELGPDDVPSILLDPSRT 272
Query: 299 KQ-LGWYERVTWEEGLQKTMKWY 320
Q GW E E + + WY
Sbjct: 273 FQDFGWKEFTPLSETVSAALAWY 295
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 72/312 (23%), Positives = 116/312 (37%), Gaps = 73/312 (23%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEY-KIVVL-------------------DKLDYCSN 47
K++LITGA GF+ + +L+ + P+ KI +L D N
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 48 LKNLNPSRLSPNFKFIKGDVASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSFE 103
L L S++ P I+GD++ +L L E+++ I+H AA +F +
Sbjct: 61 LNPLFESKIVP----IEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATV----TFDERLD 112
Query: 104 FT-KNNIYGTHVLLEACKITGQIKRFIHVST----------DEVYGETDEDAVVGNHEAS 152
N+ GT LLE K ++K F+HVST +E D +
Sbjct: 113 EALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADP-EKLIDIL 171
Query: 153 QLLPT---------------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP 197
+L+ N Y+ TKA AE LV+ LP++ R + V + P
Sbjct: 172 ELMDDLELERATPKLLGGHPNTYTFTKALAERLVLKER--GNLPLVIVRPSIVGATLKEP 229
Query: 198 -------EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE-----AFDTILHKGEV 245
L KG ++ D + V + + VA A + + K
Sbjct: 230 FPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPRE 289
Query: 246 GHVYNIGTKKER 257
VY+ G+
Sbjct: 290 LEVYHCGSSDVN 301
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 6e-15
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNS---FEFTKNNIYGTHVLLEACKI 121
D+ V EK ++ AA+ V N +F + N+ +++A
Sbjct: 33 LDLTRQADVEAFFAKEKPTYVILAAAK--VGGIHANMTYPADFIRENLQIQTNVIDAAYR 90
Query: 122 TGQIKRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTNP-YSATKAGAEMLVMAYG 175
G +K+ + + + +Y + E A+ PTN Y+ K + AY
Sbjct: 91 HG-VKKLLFLGSSCIYPKFAPQPIPETAL---LTGP-PEPTNEWYAIAKIAGIKMCQAYR 145
Query: 176 RSYGLPVITTRGNNVYGPN-QF-PEK------LIPKFILLAMKGKPLPIH-GDGSNVRSY 226
YG I+ N+YGP+ F PE LI +F G P + G GS +R +
Sbjct: 146 IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREF 205
Query: 227 LYCEDVAEAFDTILHK-GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP 285
L+ +D+A+A ++ + HV N+G+ E + ++A + + + + ++ + ++P
Sbjct: 206 LHVDDLADAVVFLMRRYSGAEHV-NVGSGDEVTIKELAELVKE--VVGFEGELVWDTSKP 262
Query: 286 FNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISN 323
R +D KL+ LGW + + ++GLQ+T KWY+ N
Sbjct: 263 DGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300
|
Length = 306 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 9e-15
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVL----------DKLDYCSNLKNLNPSRL-- 56
+L+TGA GF+ +++ L+ KI L ++L NLK +
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLI--DNLKEYGLNLWDE 58
Query: 57 --SPNFKFIKGDVASADLV----HFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY 110
K + GD++ +L + L E++D I+H A N E N+
Sbjct: 59 LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANV---NWVYPYEELKPANVL 115
Query: 111 GTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA----VVGNHEASQLLPTNPYSATKAG 166
GT LL+ TG++K VST V+ + +A + SQ N Y +K
Sbjct: 116 GTKELLKLAA-TGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWV 174
Query: 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG 211
AE L+ + GLPV R N++G ++ F +KG
Sbjct: 175 AEKLLREA-ANRGLPVAIIRPGNIFGDSETGIGNTDDFFWRLLKG 218
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 9e-15
Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 41/253 (16%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
ILI G FI + L+ + + V ++ L + I GD
Sbjct: 1 MKILIIGGTRFIGKALVEELLAA--GHDVTVFNR--------GRTKPDLPEGVEHIVGDR 50
Query: 68 ASADLVHFILLTEKIDTIMHFAAQT--HVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D + +L E D ++ A T V+ L+A K G++
Sbjct: 51 NDRDALEELLGGEDFDVVVDTIAYTPRQVER------------------ALDAFK--GRV 90
Query: 126 KRFIHVSTDEVYG----ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
K++I +S+ VY E + +A L Y K AE +++ + P
Sbjct: 91 KQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLI---EAAAFP 147
Query: 182 VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241
R +YGP + +L F +G+P+ + GDG ++ +++ +D+A A
Sbjct: 148 YTIVRPPYIYGPGDYTGRL-AYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAG 206
Query: 242 KGE-VGHVYNIGT 253
+ +G ++NI
Sbjct: 207 NPKAIGGIFNITG 219
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-14
Identities = 56/245 (22%), Positives = 91/245 (37%), Gaps = 23/245 (9%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TGAAG + + RL + + LD+ P P ++++ D+
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRR---------PPGSPPKVEYVRLDIRD 51
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
E D ++H A N+ GT +L+AC G + R +
Sbjct: 52 PAAADVFRERE-ADAVVHLAFILDPPRDGAERHRI---NVDGTQNVLDACAAAG-VPRVV 106
Query: 130 HVSTDEVYG-ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRG 187
S+ VYG D A + + P YS KA E L+ + R + L V R
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRP 166
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+ GP + + LP+ G +L+ +DVA A + G G
Sbjct: 167 ATILGPG------TRNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAGATG- 219
Query: 248 VYNIG 252
++N+
Sbjct: 220 IFNVA 224
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 6e-14
Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 31/247 (12%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+LITGA+GF+ + RL+ + P +++++D + PS +P I GD+A
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVPNERLILIDV------VSPKAPSG-APRVTQIAGDLA 54
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKITGQIKR 127
L+ L + D + H AA V F+ + N+ GT LLEA + G R
Sbjct: 55 VPALIE-ALANGRPDVVFHLAA--IVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPR 111
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY-------GRSYGL 180
F+ S+ VYG V +H A L P + Y A KA E+L+ Y GR+ L
Sbjct: 112 FVFTSSLAVYG-LPLPNPVTDHTA--LDPASSYGAQKAMCELLLNDYSRRGFVDGRTLRL 168
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKP--LPIHGDGSNVRSYLYCEDVAEAFDT 238
P + R PN+ I + G+ LP +R +L + VA A
Sbjct: 169 PTVCVRPGR---PNKAASAFASTIIREPLVGEEAGLP---VAEQLRYWL--KSVATAVAN 220
Query: 239 ILHKGEV 245
+H E+
Sbjct: 221 FVHAAEL 227
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 4e-13
Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 61/355 (17%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
K +LI G GFI H+ R++ ++++ +D L P F +GD
Sbjct: 1 MKKVLILGVNGFIGHHLSKRIL-ETTDWEVYGMDM-----QTDRLGDLVNHPRMHFFEGD 54
Query: 67 VASA-DLVHFILLTEKIDTIMHFAA----QTHVDNSFGNSFE--FTKNNIYGTHVLLEAC 119
+ + + + + +K D I+ A T+V FE F N ++ A
Sbjct: 55 ITINKEWIEYHV--KKCDVILPLVAIATPATYVKQPL-RVFELDFEAN----LPIVRSAV 107
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNP----YSATKAGAEMLVMA 173
K K + ST EVYG ++ + EAS L+ P N Y+ +K + ++ A
Sbjct: 108 KYG---KHLVFPSTSEVYGMCPDEEF--DPEASPLVYGPINKPRWIYACSKQLMDRVIWA 162
Query: 174 YGRSYGLPV--------ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225
YG GL I +++Y P + +++ +F+ ++G+P+ + GS R+
Sbjct: 163 YGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRA 222
Query: 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGT-KKERRVIDVATDICKLFSLNPD-----T 276
+ +D +A I+ + G +YNIG K V ++A + +L + P+
Sbjct: 223 FTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAK 282
Query: 277 QIKFVENRPFNDQRY---FLDVQK--------LKQLGWYERVTWEEGLQKTMKWY 320
++K VE + Y + DVQ +++LGW + T ++ L++ + Y
Sbjct: 283 KVKLVETT--SGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAY 335
|
Length = 347 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 6e-13
Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 26/276 (9%)
Query: 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRL--ENRSQLLADIQNVKPTHVFNAAGV 442
+K LI G G +G L + + + L + +L I+ +P V NAA
Sbjct: 1 MKILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAY 60
Query: 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIG 502
T VD E+ N G LA E G +++ +T +F+ + P
Sbjct: 61 T---AVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGP------ 111
Query: 503 FKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISSDLNNPRNFITKISRYNK 561
+KE D PN + Y ++K EE ++ LR NN + ++++ K
Sbjct: 112 YKETDTPNPL-NVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGK 170
Query: 562 VVNIPN----SMTILDELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGF 616
+ + + S T ++L +E+ ++ G+++ N G S E + I
Sbjct: 171 ELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAK----AIFEEA 226
Query: 617 KWTNFTLE---EQAKVIVAPR-SNNELDASKLKKEF 648
+E A R +N+ LD KL+K F
Sbjct: 227 GVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAF 262
|
Length = 281 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 33/173 (19%)
Query: 388 LIYGRTGWIGGLLSKICEKKGIP-----------------FEYGKGRLENRSQLLADIQN 430
L+ G TG+IG L + ++G + +G L + L +
Sbjct: 2 LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLAE 61
Query: 431 VKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA-TGCIF 489
V+P V + A +G V + IR NV+GTL L + R G+ +A + ++
Sbjct: 62 VQPDAVIHLAAQSG---VGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVY 118
Query: 490 EYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR 537
+ E+ S Y+ K E L++ Y LR
Sbjct: 119 ------GDVADPPITEDTPLGPL-SPYAAAKLAAERLVEAYARAYGLRAVILR 164
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 31/290 (10%)
Query: 58 PNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
P GD+ + + IL + D I + AAQ+HV SF + GT LLE
Sbjct: 55 PRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLE 114
Query: 118 ACKITGQIK-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
A +I G+ K RF ST E+YG E E + P +PY+ K A + + Y
Sbjct: 115 AIRILGEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRSPYAVAKLYAYWITVNYRE 171
Query: 177 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM----KGKPLPIH-GDGSNVRSYLYCED 231
SYGL N P + E + + I A+ G ++ G+ R + + +D
Sbjct: 172 SYGLFACNGILFNHESPLR-GETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKD 230
Query: 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFN---- 287
EA +L + E Y I T + V + ++ ++ + + V+ + +
Sbjct: 231 YVEAMWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTG 289
Query: 288 ------DQRYF--LDVQKL--------KQLGWYERVTWEEGLQKTMKWYI 321
D RYF +V L ++LGW V+ EE +++ ++ +
Sbjct: 290 KIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADL 339
|
Length = 345 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 9e-12
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 29/183 (15%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILI GA GFI + L+ +++ +L + + ++GD+
Sbjct: 1 ILILGATGFIGRALARELLEQ--GHEVTLLVRNTKRLS------KEDQEPVAVVEGDLRD 52
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
D + + +D ++H A +F + ++ GT +LEA K G +K FI
Sbjct: 53 LDSLSDAVQ--GVDVVIHLAGAPRDTR------DFCEVDVEGTRNVLEAAKEAG-VKHFI 103
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+S+ YG+ HE ++ P++PY A KA E ++ R LP R
Sbjct: 104 FISSLGAYGDL--------HEETEPSPSSPYLAVKAKTEAVL----REASLPYTIVRPGV 151
Query: 190 VYG 192
+YG
Sbjct: 152 IYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 9e-12
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K+ILITG G +RL+ NY KI++ + + +P +F GDV
Sbjct: 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDV 62
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + L +D ++H AA V + N FE + NI G +++A I +KR
Sbjct: 63 RDKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAA-IDNGVKR 119
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA---YGRSYGLPVIT 184
+ +STD +A+ P N Y ATK ++ L +A S G
Sbjct: 120 VVALSTD---------------KAAN--PINLYGATKLASDKLFVAANNISGSKGTRFSV 162
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCED----VAEAFDTI 239
R NV G ++P F L +G LPI D R ++ E V ++ +
Sbjct: 163 VRYGNVVGSRG---SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLE-R 217
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP 285
+ GE+ V I + K + D+A ++ P+ K V RP
Sbjct: 218 MLGGEI-FVPKIPSMK---ITDLAE------AMAPECPHKIVGIRP 253
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 3e-11
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 43/214 (20%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVL----------DKL-----DYCSNLKNLNP 53
+L+TGA GF+ +++ L+ + K++ L ++L Y ++L
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60
Query: 54 SRLSPNFKFIKGDVASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNI 109
R+ + GD++ L + L E +DTI+H A + + E N+
Sbjct: 61 ERIEV----VAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYS---ELRGANV 113
Query: 110 YGTHVLLEACKITGQIKRFIHVSTDEVY------GETDEDAVVGNHEASQLLPTNPYSAT 163
GT +L +G+ K +VST V T++DA V Y+ +
Sbjct: 114 LGTREVLRLA-ASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPP----PGLAGGYAQS 168
Query: 164 KAGAEMLVMAYGRSYGLPVITTR-----GNNVYG 192
K AE+LV GLPV R GN+ G
Sbjct: 169 KWVAELLV-REASDRGLPVTIVRPGRILGNSYTG 201
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 4e-11
Identities = 83/327 (25%), Positives = 132/327 (40%), Gaps = 39/327 (11%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
I ITGA GFIASH+ RL + I+ D K KN + S +F D+
Sbjct: 24 ICITGAGGFIASHIARRL--KAEGHYIIASDWK-------KNEHMSEDMFCHEFHLVDLR 74
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFG----NSFEFTKNNIYGTHVLLEACKITGQ 124
+ + + +T+ +D + + AA G N NN + +LEA +I G
Sbjct: 75 VME--NCLKVTKGVDHVFNLAADM---GGMGFIQSNHSVIMYNNTMISFNMLEAARING- 128
Query: 125 IKRFIHVSTDEVYGE-TDEDAVVGNHEASQ--LLPTNPYSATKAGAEMLVMAYGRSYGLP 181
+KRF + S+ +Y E + V E+ P + Y K E L Y + +G+
Sbjct: 129 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIE 188
Query: 182 VITTRGNNVYGP----NQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAF 236
R +N+YGP EK F A+ + GDG RS+ + ++ E
Sbjct: 189 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV 248
Query: 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN----RPFNDQRYF 292
L K + NIG+ + + ++A L N IK + R N
Sbjct: 249 -LRLTKSDFREPVNIGSDEMVSMNEMAEIA--LSFENKKLPIKHIPGPEGVRGRNSDNTL 305
Query: 293 LDVQKLKQLGWYERVTWEEGLQKTMKW 319
+ ++LGW + ++GL+ T W
Sbjct: 306 I----KEKLGWAPTMRLKDGLRITYFW 328
|
Length = 370 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYK-IVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
L+TG GF+ H+ L+ E K I VLDK +++ S+ I+GD+
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFG--NSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + + ++H AA V FG N E + N+ GT +LEAC +KR
Sbjct: 63 LSFLF--RACQGVSVVIHTAAIVDV---FGPPNYEELEEVNVNGTQAVLEACVQNN-VKR 116
Query: 128 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTN--PYSATKAGAEMLVM-AYGRSY--GLP 181
++ S+ EV G + E + T+ PY+++K AE +V+ A G G
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGY 176
Query: 182 VITT--RGNNVYG 192
++T R +YG
Sbjct: 177 LVTCALRPMYIYG 189
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 61.9 bits (150), Expect = 2e-10
Identities = 49/299 (16%), Positives = 96/299 (32%), Gaps = 49/299 (16%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG-----------------IPFEYGKGRLENRSQLLADI 428
+ L+ G G+IG L + G E+ L +R L+ ++
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDR-DLVDEL 60
Query: 429 QNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATG 486
P V + A + P D + E + NV GTL L + R G+ + +
Sbjct: 61 AKGVPDAVIHLAAQSSVP--DSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVS 118
Query: 487 CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRV--- 538
++ P E+ P + Y +K E+LL+ Y V LR
Sbjct: 119 VVYGDPPPLP------IDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNV 172
Query: 539 ---RMPISSDLNNPRNFITKISRYNKVVNIPNSMTI------LDELLPISVEMAKRNLSG 589
FI ++ + ++ I + +D++ + + G
Sbjct: 173 YGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG 232
Query: 590 IWNFTNPGV-VSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKE 647
++N + ++ E+ E + + + + + LD SK +
Sbjct: 233 VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKL---LDISKARAA 288
|
Length = 314 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 30/226 (13%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVL----------DKLDYCSNLKNLNPSRLS 57
+N+L+TGA GF+ +++ L+ + K++ L +L+ +L +
Sbjct: 1 RNVLLTGATGFLGAYLLLELLD-RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSA 59
Query: 58 PNFKFIKGDVASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTH 113
+ + GD+A DL + L E +D I+H AA + E N+ GT
Sbjct: 60 DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTA 116
Query: 114 VLLEACKITGQIKRFIHVSTDEVY-------GETDEDAVVGNHEASQLLPTNPYSATKAG 166
+L TG+ K +VS+ V D D + Q Y +K
Sbjct: 117 EVLRLA-ATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQ-GLAGGYGRSKWV 174
Query: 167 AEMLV-MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG 211
AE LV A R GLPV R + G ++ F+ + G
Sbjct: 175 AEKLVREAGDR--GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLG 218
|
Length = 382 |
| >gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 4e-10
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 59 NFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLE 117
K GD+ + + I+ K I + AAQ+HV SF E+T + GT LLE
Sbjct: 56 RMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSF-EIPEYTADVDGIGTLRLLE 114
Query: 118 ACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
A + G IK +F ST E+YG+ E + +E + P +PY+A K A + + Y
Sbjct: 115 AVRTLGLIKSVKFYQASTSELYGKVQE---IPQNETTPFYPRSPYAAAKLYAHWITVNYR 171
Query: 176 RSYGL 180
+YGL
Sbjct: 172 EAYGL 176
|
Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 4e-10
Identities = 76/257 (29%), Positives = 109/257 (42%), Gaps = 37/257 (14%)
Query: 4 VYTPKNILITGAAGFIASHVCNRLIG-NYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKF 62
++ K +LITG G + V R + + E +I D+ K N S+L KF
Sbjct: 1 MFKDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKL----KF 56
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GDV D + T +D I H AA V + + E K N+ GT +LEA I
Sbjct: 57 YIGDVR--DYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAA-IA 113
Query: 123 GQIKRFIHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR---SY 178
+KR + +STD+ VY P N +KA E +++A R S
Sbjct: 114 NGVKRVVCLSTDKAVY------------------PINAMGISKAMMEKVMVAKSRNVDSS 155
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
+ TR NV +IP F+ L GKPL I D + R + ED A D
Sbjct: 156 KTVICGTRYGNVMASRG---SVIPLFVDLIKAGKPLTI-TDPNMTRFMMTLED---AVDL 208
Query: 239 ILHKGEVGHVYNIGTKK 255
+L+ E G+ +I +K
Sbjct: 209 VLYAFEHGNNGDIFVQK 225
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 5e-10
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIV-VLDKLDYCSNLKN-LNPSRLSPNFKFIKGDV 67
+L+TGA GFIASH+ +L+ YK+ + L + LK L + + +F+ D
Sbjct: 2 VLVTGATGFIASHIVEQLLKA--GYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDD 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+A + + +D ++H A+ + + GT +LEA K G +KR
Sbjct: 60 LTAPNA-WDEALKGVDYVIHVASPFPFTG-PDAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117
Query: 128 FIHVST------------DEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAE 168
+ S+ +V+ E D + + ++ + Y A+K AE
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSN------GLDAYIASKTLAE 166
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 60/257 (23%), Positives = 87/257 (33%), Gaps = 57/257 (22%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK--G 65
+ + GA GFI +V NRL +++V P R + + G
Sbjct: 1 MVVTVFGATGFIGRYVVNRLA--KRGSQVIV--------------PYRCEAYARRLLVMG 44
Query: 66 DVASADLVHFILLT-EKIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHV-----LL 116
D+ V F L E I A D N G +E + HV L
Sbjct: 45 DLGQVLFVEFDLRDDESIR-----KALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLA 99
Query: 117 EACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
+A K G ++R IH+S G D + + Y +KA E V R
Sbjct: 100 KAAKEAG-VERLIHISA---LG-ADAN------------SPSKYLRSKAEGEEAV----R 138
Query: 177 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
R + V+G ++ + +F L P+ G G +Y DVAEA
Sbjct: 139 EAFPEATIVRPSVVFGRE---DRFLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAI 195
Query: 237 DTILHKGEV-GHVYNIG 252
L E G Y +
Sbjct: 196 ARALKDPETEGKTYELV 212
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 23/227 (10%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG---IPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGV 442
+ LI G G +G L + +G + + L + L ++ ++P V N A
Sbjct: 1 RILITGANGQLGRELVQQLSPEGRVVVALTRSQLDLTDPEALERLLRAIRPDAVVNTAAY 60
Query: 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIG 502
T +VD E+ + N + LA +G +++ +T +F+ + K P
Sbjct: 61 T---DVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRP------ 111
Query: 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNK- 561
++E+D N + Y ++K E+ ++ L VR RNF+ + R
Sbjct: 112 YREDDATN-PLNVYGQSKLAGEQAVRAA-GPNALIVRTSWLYGGGGGRNFVRTMLRLAGR 169
Query: 562 ------VVNIPNSMTILDELLPISVEMAKRN--LSGIWNFTNPGVVS 600
V + S T +L + + +R G+++ N G S
Sbjct: 170 GEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS 216
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 4e-09
Identities = 63/284 (22%), Positives = 96/284 (33%), Gaps = 39/284 (13%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVL----DKLDYCSNLKNLN--PSRLSPNFKFI 63
+L+TGA+GF+ASHV +L+ YK+ K+ ++L +L+ P RL
Sbjct: 1 VLVTGASGFVASHVVEQLLER--GYKVRATVRDPSKVKKVNHLLDLDAKPGRLE------ 52
Query: 64 KGDVASADLVHFILLTEKI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+A ADL E I + H A + N E K I GT L+A
Sbjct: 53 ---LAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPN--EVIKPAIGGTLNALKAAA 107
Query: 121 ITGQIKRFIHVST--------DEVYGETDEDAVVGNHE--ASQLLPTNPYSATKAGAEML 170
+KRF+ S+ V G ++ E + Y+A+K AE
Sbjct: 108 AAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKA 167
Query: 171 VMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMK---GKPLPIHG-DGSNVRSY 226
+ + +IT G E P AM G Y
Sbjct: 168 AWKFADENNIDLITVIPTLTIGTIFDSE--TPSSSGWAMSLITGNEGVSPALALIPPGYY 225
Query: 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF 270
++ D+ A L Y I T + + K +
Sbjct: 226 VHVVDICLAHIGCLELPIARGRY-ICTAGNFDWNTLLKTLRKKY 268
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-----PSRLSPNF 60
K LITG G S++ L+ Y++ + + N + L+ P
Sbjct: 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARM 62
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLEAC 119
K GD++ A + L K D + + AAQ+HV SF ++T + + G LLEA
Sbjct: 63 KLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMP-DYTADVVATGALRLLEAV 121
Query: 120 KITGQIK----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
++ GQ ++ + E+YG T E + P +PY+ K A + Y
Sbjct: 122 RLHGQETGRQIKYYQAGSSEMYGSTPPP----QSETTPFHPRSPYAVAKVAAHWYTVNYR 177
Query: 176 RSYGL 180
+YGL
Sbjct: 178 EAYGL 182
|
Length = 340 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 68/328 (20%), Positives = 109/328 (33%), Gaps = 63/328 (19%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
ILITGA G + + +L R+ + D+
Sbjct: 2 ILITGANGQLGRELVQQL-----------------------SPEGRVVVALTRSQLDLTD 38
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ + +L + D +++ AA T VD + + + N L A G R +
Sbjct: 39 PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLV 96
Query: 130 HVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG-RSYGL 180
H+STD V Y E D P N Y +K E V A G +
Sbjct: 97 HISTDYVFDGEGKRPYREDDATN-----------PLNVYGQSKLAGEQAVRAAGPNAL-- 143
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
++ T +YG + + LA +G+ L + D + S Y +D+A +L
Sbjct: 144 -IVRTSW--LYGGGG-GRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALL 197
Query: 241 -HKGEVGHVYNIGTKKE-------RRVIDVATDICKLFSLNPDTQIKFVE-NRPFNDQRY 291
VY++ + + + + A L I E RP Y
Sbjct: 198 QRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAY 257
Query: 292 -FLDVQKLKQLGWYERVTWEEGLQKTMK 318
LD KL + W E L+ +K
Sbjct: 258 SVLDNTKLVKTLGTPLPHWREALRAYLK 285
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 57/288 (19%), Positives = 102/288 (35%), Gaps = 51/288 (17%)
Query: 388 LIYGRTGWIGGLLSKICEKKG---IPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444
L+ G G +G L+++ ++G + + + L + + A ++ +P V NAA T
Sbjct: 2 LVTGANGQLGRELTRLLAERGVEVVALDRPELDLTDPEAVAALVREARPDVVVNAAAYT- 60
Query: 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFK 504
VD E+ N +G LA+ C G +++ +T +F+ P ++
Sbjct: 61 --AVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTDYVFDGAKGGP------YR 112
Query: 505 EEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP--ISSDLNNPRNFITKISRYNKV 562
E+D Y +TK E+ + N L +R NF+ + R +
Sbjct: 113 EDDPTGPLN-VYGRTKLAGEQAVLAA-NPRHLILRTAWVYG---EYGNNFVKTMLR---L 164
Query: 563 VNIPNSMTILDELL--PISVE-------------MAKRNLSGIWNFTNPGVVSHNEILEM 607
+ + ++D+ L P S + L+G ++ G S +
Sbjct: 165 AAERDELRVVDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYDFARA 224
Query: 608 YKAYIDPGFKWTNFTLEE------QAKVIVAPRSNNE-LDASKLKKEF 648
I F A R N LD SKL+ F
Sbjct: 225 ----I---FDEAGADGGRVRPIPTAEYPTPARRPANSVLDTSKLEATF 265
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 8e-09
Identities = 87/367 (23%), Positives = 151/367 (41%), Gaps = 67/367 (18%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL---NPSRLSPNFKF- 62
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L + S +F
Sbjct: 14 PLTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVPWSGRIQFH 70
Query: 63 ---IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
IK D L+ + D ++ AA + + +N +++ C
Sbjct: 71 RINIKHDSRLEGLI------KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC 124
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ-----LLPTN--------------PY 160
KR IH ST EVYG+T + +H Q +L + Y
Sbjct: 125 SENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSY 182
Query: 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPN-QF------PEKLIPKFILLA----- 208
+ K E L+ A G GL R N GP F P + +P+ +LA
Sbjct: 183 ACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR--VLACFSNN 240
Query: 209 -MKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV--GHVYNIGTKKE----RRVID 261
++ +PL + G + R+++Y +D EA ++ GH++N+G R++ +
Sbjct: 241 LLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 300
Query: 262 VATDICKLFSLNPDTQIKFVE--NRPF-------NDQRYFLDVQKLKQLGWYERVTWEEG 312
+ T++ S P + V+ ++ F +D+R KQLGW + + +
Sbjct: 301 MMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL 360
Query: 313 LQKTMKW 319
L+ T+ +
Sbjct: 361 LESTLTY 367
|
Length = 386 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 51/271 (18%), Positives = 85/271 (31%), Gaps = 65/271 (23%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD- 66
IL+TGA GF+ V L+ +++ N + + L+ + + GD
Sbjct: 1 MKILVTGATGFVGGAVVRELLARG--HEVRAA-----VRNPEAA--AALAGGVEVVLGDL 51
Query: 67 -------VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
+ + +L++ +D F A A
Sbjct: 52 RDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQV---------------TAVVRAAEAAG 96
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
+K + +S V+G AS + KA E A RS G
Sbjct: 97 AG---VKHGVSLS------------VLGADAASPS----ALARAKAAVE----AALRSSG 133
Query: 180 LPVITTRGNNVYGPNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDVAEAF-D 237
+P T R Y FI A G P+ G G S + +DVAEA
Sbjct: 134 IPYTTLRRAAFYLGA------GAAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAA 185
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICK 268
+ G Y + + + ++A+ +
Sbjct: 186 ALDAPATAGRTYELAGPEALTLAELASGLDY 216
|
Length = 275 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 40/289 (13%)
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE--FTK-NNIYGTHVLLEA 118
F GD + + +L + + D ++HFA Q S + +T+ NN+ GT LL A
Sbjct: 70 FYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNVIGTLNLLFA 129
Query: 119 CKITGQIKRFIHVSTDEVYGETDED------AVVGNHEASQLL-PTNP---YSATKAGAE 168
K + + T YG + D + N L P Y +K
Sbjct: 130 IKEFDPDCHLVKLGTMGEYGTPNIDIPEGYITIEHNGRRDTLPYPKQAGSWYHLSKVHDS 189
Query: 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP-----------------KFILLAMKG 211
+M +++G+ + VYG + +F + A G
Sbjct: 190 HNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYDGVFGTVLNRFCVQAAIG 249
Query: 212 KPLPIHGDGSNVRSYLYCED----VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDIC 267
PL ++G G R ++ D + A + GE V+N T++ V ++A +
Sbjct: 250 HPLTVYGKGGQTRGFISIRDTVQCLELALENPAKAGEY-RVFNQFTEQ-FSVGELAEMVA 307
Query: 268 KLFS-LNPDTQIKFVENRPFNDQRYFLDVQ--KLKQLGWYERVTWEEGL 313
+ S L D +++ + N + ++ + + KL LG E E L
Sbjct: 308 EAGSKLGLDVKVEHLPNPRVEAEEHYYNAKNTKLLDLG-LEPHYLSESL 355
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 74/327 (22%), Positives = 108/327 (33%), Gaps = 70/327 (21%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TGA G + + L ++V LD+ + D+
Sbjct: 1 ILVTGANGQLGRELTRLLAER--GVEVVALDRPE---------------------LDLTD 37
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ V ++ + D +++ AA T VD + N G L EAC G I
Sbjct: 38 PEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLI 95
Query: 130 HVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG-RSYGL 180
H+STD V Y E D P N Y TK E V+A R
Sbjct: 96 HISTDYVFDGAKGGPYREDDP-----------TGPLNVYGRTKLAGEQAVLAANPRHL-- 142
Query: 181 PVITTRGNNVYGP--NQFPEKLIPKFIL-LAMKGKPLPIHGD--GSNVRSYLYCEDVAEA 235
++ T VYG N F K +L LA + L + D GS + + +
Sbjct: 143 -ILRTAW--VYGEYGNNF-----VKTMLRLAAERDELRVVDDQLGSPTSARDLADALLAL 194
Query: 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-----SLNPDTQIKFVE--NRPFND 288
L + Y++ E D A I + P ++ RP N
Sbjct: 195 IRKRLRGPALAGTYHLAGSGETSWYDFARAIFDEAGADGGRVRPIPTAEYPTPARRPANS 254
Query: 289 QRYFLDVQKLKQLGWYERVTWEEGLQK 315
LD KL+ W E L +
Sbjct: 255 V---LDTSKLEATFGIPLPDWREALAE 278
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 5e-08
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 20/126 (15%)
Query: 422 SQLLADIQNVK----PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG 477
+LL V V + A + G V + E TNVVGTL L + R+ G
Sbjct: 16 RRLLERGHEVVVIDRLDVVVHLAALVG---VPASWDNPDEDFETNVVGTLNLLEAARKAG 72
Query: 478 LLMMNYA-TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---- 532
+ YA + ++ G+ +EE P S Y +K E LL+ Y
Sbjct: 73 VKRFVYASSASVY------GSPEGLPEEEETPPRPL-SPYGVSKLAAEHLLRSYGESYGL 125
Query: 533 -VCTLR 537
V LR
Sbjct: 126 PVVILR 131
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70
L+TGA GF+ S V L+ E +++V D NL+ L+ ++GD+
Sbjct: 4 LVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-RNLEGLDVEI-------VEGDLRDP 55
Query: 71 DLVHFILLTEKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + + H AA + D E N+ GT LL A G ++R
Sbjct: 56 ASLRKAV--AGCRALFHVAADYRLWAPDPE-----EMYAANVEGTRNLLRAALEAG-VER 107
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTN---PYSATKAGAEMLVMAYGRSYGLPVIT 184
++ S+ G D E + + Y +K AE + GLPV+
Sbjct: 108 VVYTSSVATLG-VRGDGTPA-DETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVI 165
Query: 185 TRGNNVYGPNQFPEKLIP--KFILLAMKGKPLPIHGD-GSNVRSYLYCEDVAEAFDTILH 241
+ GP K P + I+ + GK +P + D G N+ ++ +DVAE L
Sbjct: 166 VNPSTPIGP--RDIKPTPTGRIIVDFLNGK-MPAYVDTGLNL---VHVDDVAEGHLLALE 219
Query: 242 KGEVGHVYNIG 252
+G +G Y +G
Sbjct: 220 RGRIGERYILG 230
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 27/243 (11%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+ +TGA GFI S V L+ +++V L + D + L + +GD+
Sbjct: 3 VFVTGATGFIGSAVVRELVAA--GHEVVGLARSD--AGAAKLEAAGAQV----HRGDLED 54
Query: 70 ADLVHFILLTE--KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
D IL + D ++H A + F N + + + L EA + TG K
Sbjct: 55 LD----ILRKAAAEADAVIHLAF----THDFDNFAQACEVDRRAIEALGEALRGTG--KP 104
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
I+ S + G T EA PT A +A +E + +
Sbjct: 105 LIYTSGIWLLGPTGGQEED--EEAPDDPPT---PAARAVSEAAALELAERGVRASVVRLP 159
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
V+G +P I +A + GDG N ++ +D A + L KG+ G
Sbjct: 160 PVVHGRGD--HGFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGS 217
Query: 248 VYN 250
VY+
Sbjct: 218 VYH 220
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 55/242 (22%), Positives = 83/242 (34%), Gaps = 67/242 (27%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
ILITGA GFI ++ RL + I D+ +
Sbjct: 1 MKILITGAKGFIGKNLIARL-KEQKDDDIFFYDR------------------------ES 35
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ--- 124
++L F+ D I H A N + EF N+ T LL+A G+
Sbjct: 36 DESELDDFLQ---GADFIFHLAGV----NRPKDEAEFESGNVGLTERLLDALTRNGKKPP 88
Query: 125 --IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
+ I + D NPY +K AE L+ Y R G PV
Sbjct: 89 ILLSSSIQAALD-----------------------NPYGKSKLAAEELLQEYARETGAPV 125
Query: 183 ITTRGNNVYG----PNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
R NV+G PN + F + P+ I+ + + + +Y +DV +
Sbjct: 126 YIYRLPNVFGKWCRPNY--NSAVATFCYNIARDLPIQINDPAAEL-TLVYIDDVVDELIQ 182
Query: 239 IL 240
+L
Sbjct: 183 LL 184
|
This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 115 LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 174
LL+A ++R I++S+ VYG+ + V E S P+ AE ++A
Sbjct: 83 LLDALAQLPAVQRVIYLSSTGVYGDQQGEWVD---ETSPPNPSTESGRALLEAEQALLAL 139
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
G P R +YGP + + + +G P G+ R ++ +D+
Sbjct: 140 GS---KPTTILRLAGIYGPG----RHPLRRLA---QGTGRPPAGNAPTNR--IHVDDLVG 187
Query: 235 AFDTILHKGEVGHVYNI 251
A L + G VYN+
Sbjct: 188 ALAFALQRPAPGPVYNV 204
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 72/355 (20%), Positives = 128/355 (36%), Gaps = 68/355 (19%)
Query: 7 PKNILITGAAGF----IASHVCNRLIGNYPEYKIVVLDKL-----DYCSNLKNLNPSRLS 57
K +++ G G+ A H+ R Y++ ++D L D+ L +L P S
Sbjct: 47 KKKVMVIGGDGYCGWATALHLSKR------GYEVAIVDNLCRRLFDHQLGLDSLTPIA-S 99
Query: 58 PN-------------FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFE- 103
+ + GD+ + + + + D ++HF Q S +
Sbjct: 100 IHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRA 159
Query: 104 -FTK-NNIYGTHVLLEACKITGQIKRFIHVSTDEVYG----ETDEDAVVGNH---EASQL 154
FT+ NN+ GT +L A K + + T YG + +E + H +
Sbjct: 160 VFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLP 219
Query: 155 LPTNP---YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPN----QFPEKLIPK---- 203
P Y +K + +++G+ VYG E+LI +
Sbjct: 220 YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD 279
Query: 204 ---------FILLAMKGKPLPIHGDGSNVRSYLYCEDVAE----AFDTILHKGEVGHVYN 250
F + A G PL ++G G R +L D A GE V+N
Sbjct: 280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEF-RVFN 338
Query: 251 IGTKKERRVIDVATDICKLFS-LNPDTQIKFVENRPFNDQRYFLDVQ--KLKQLG 302
T ++ V ++A + K L D ++ V N + ++ + + KL +LG
Sbjct: 339 QFT-EQFSVNELAKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCELG 392
|
Length = 442 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 26/198 (13%)
Query: 447 NVDWCETHKP-ETIR-TNVVGTLTLADVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGF 503
NV+W P E ++ NV+GT L + L +++ T +F + +
Sbjct: 99 NVNW---VYPYEELKPANVLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESD 155
Query: 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDN----VCTLRVRMPISSD----LNNPRNFITK 555
+ N + Y ++K + E+LL+E N V +R I D + N +F +
Sbjct: 156 DMLESQNGLPNGYIQSKWVAEKLLREAANRGLPVAIIRPGN-IFGDSETGIGNTDDFFWR 214
Query: 556 ----ISRYNKVVNIPN--SMTILDELLPISVEMAKRNLSGIWNF--TNPGVVSHNEILEM 607
+ ++ +D + V++A + + NP ++S N++L+
Sbjct: 215 LLKGCLQLGIYPISGAPLDLSPVDWVARAIVKLALNESNEFSIYHLLNPPLISLNDLLDA 274
Query: 608 YKAYIDPGFKWTNFTLEE 625
+ G+ + EE
Sbjct: 275 LEEK---GYSIKEVSYEE 289
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 62/217 (28%), Positives = 83/217 (38%), Gaps = 67/217 (30%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRL--SPNFKFI 63
+LI G GFI +H+ RL+ NY Y LD S+ SR P F F+
Sbjct: 316 TRVLILGVNGFIGNHLTERLLRDDNYEVY------GLDIGSDAI----SRFLGHPRFHFV 365
Query: 64 KGDVASADLVHFILLTE-------KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 116
+GD++ +H +E K D ++ A E+T+N + V
Sbjct: 366 EGDIS----IH----SEWIEYHIKKCDVVLPLVA-------IATPIEYTRNPL---RVFE 407
Query: 117 ----EACKITGQI----KRFIHVSTDEVYG-----ETDEDA---VVGNHEASQLLPTNP- 159
E KI KR I ST EVYG DED +VG P N
Sbjct: 408 LDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVG--------PINKQ 459
Query: 160 ---YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 193
YS +K + ++ AYG GL R N GP
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGP 496
|
Length = 660 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 411 FEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLA 470
F++ KG LE+R L ++ + V + A G V + + + +N+VG L L
Sbjct: 55 FKFVKGDLEDREALRRLFKDHEFDAVIHLAAQAG---VRYSLENPHAYVDSNIVGFLNLL 111
Query: 471 DVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE 529
++CR G+ + YA + ++ + K P F E+D+ + S Y+ TK E +
Sbjct: 112 ELCRHFGVKHLVYASSSSVYGLNTKMP------FSEDDRVDHPISLYAATKKANELMAHT 165
Query: 530 Y 530
Y
Sbjct: 166 Y 166
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 37/164 (22%), Positives = 58/164 (35%), Gaps = 34/164 (20%)
Query: 388 LIYGRTGWIGGLL------------------SKICEKKGIPFEYGKGRLENRSQLLADIQ 429
L+ G TG++G L S G+P E +G L + + L A ++
Sbjct: 2 LVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLPVEVVEGDLTDAASLAAAMK 61
Query: 430 NVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIF 489
VF+ A T + E RTNV GT + D E G+ + + T I
Sbjct: 62 GCD--RVFHLAAFT-----SLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVH-TSSIA 113
Query: 490 EYDAKHPEGTGIGFKEED---KPNFTGSFYSKTKAMVEELLKEY 530
G G +E + Y ++K + E + E
Sbjct: 114 ALG-----GPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEA 152
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 53/278 (19%), Positives = 91/278 (32%), Gaps = 68/278 (24%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS--PNFKFIKGD 66
+ GA+G I V L + ++V + + S+L+ P + + D
Sbjct: 1 TAHVLGASGPIGREVARELRRRGWDVRLV------------SRSGSKLAWLPGVEIVAAD 48
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV---------LLE 117
A V I D I H A N Y ++
Sbjct: 49 AMDASSV--IAAARGADVIYHCA-----------------NPAYTRWEELFPPLMENVVA 89
Query: 118 ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG---AEM--LVM 172
A + G + + +YG + + ++ P P T+ G AEM ++
Sbjct: 90 AAEANG--AKLVLPGNVYMYGPQA-GSPI-----TEDTPFQP--TTRKGRIRAEMEERLL 139
Query: 173 AYGRSYGLPVITTRGNNVYGP---NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229
A + + R + YGP N + + ++GK G+ + Y
Sbjct: 140 AAHAKGDIRALIVRAPDFYGPGAINSWLGAALFA----ILQGKTAVFPGNLDTPHEWTYL 195
Query: 230 EDVAEAFDTILHK----GEVGHVYNIGTKKERRVIDVA 263
DVA A T+ + GE H+ G R +I +A
Sbjct: 196 PDVARALVTLAEEPDAFGEAWHLPGAGAITTRELIAIA 233
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 6e-04
Identities = 82/313 (26%), Positives = 126/313 (40%), Gaps = 82/313 (26%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVL------DKLDYCSNLKNLNPSRLSPNFKF 62
+TG GFI + +RL+ E + VL +L+ + R+ P
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLE--ALAAYWGADRVVP---- 55
Query: 63 IKGD-------VASADLVHFILLTEKIDTIMHFAA---QTHVDNSFGNSFEFTKNNIYGT 112
+ GD ++ AD+ ID ++H AA T + + N+ GT
Sbjct: 56 LVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDLTADEEA------QRAANVDGT 105
Query: 113 -HVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHE---------ASQLLPTNPYSA 162
+V+ A ++ F HVS+ AV G++E Q LPT PY
Sbjct: 106 RNVVELAERLQAAT--FHHVSS---------IAVAGDYEGVFREDDFDEGQGLPT-PYHR 153
Query: 163 TKAGAEMLVMAYGRSY-GLP--------VI----TTRGNNVYGPNQFPEKLIPKFILLAM 209
TK AE LV R GLP V+ T + + GP F K++ K LA
Sbjct: 154 TKFEAEKLV----REECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYF-FKVLAK---LAK 205
Query: 210 KGKPLPIHG-DG--SNVRSYLYCEDVAEAFDTILHK-GEVGHVYNIGTKKERRVIDVATD 265
LP+ G DG +N+ Y VA+A D ++HK G G +++ K +RV D+
Sbjct: 206 LPSWLPMVGPDGGRTNIVPVDY---VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNA 262
Query: 266 ICKLFSLNPDTQI 278
+ PD ++
Sbjct: 263 FARAAGAPPDARL 275
|
Length = 657 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 6e-04
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 56 LSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN-------N 108
L KFI+ DV + + +D + H A S+G S N N
Sbjct: 38 LPEGIKFIQADVRDLSQLEKAV--AGVDCVFHIA-------SYGMSGREQLNRELIEEIN 88
Query: 109 IYGTHVLLEACKITGQIKRFIHVSTDEVY--GETDEDAVVGNHEASQLLP----TNPYSA 162
+ GT +++ C + ++ R I+ ST V G+ + E+ LP + YS
Sbjct: 89 VRGTENIIQVC-VRRRVPRLIYTSTFNVIFGGQPIRNG----DESLPYLPLDLHVDHYSR 143
Query: 163 TKAGAEMLV-----MAYGRSYG-LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI 216
TK+ AE LV M + G L R +YGP + ++ +P+ + KG + +
Sbjct: 144 TKSIAEQLVLKANNMPLPNNGGVLRTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFMFV 201
Query: 217 HGDGSNVRSYLYCEDVAEA 235
+GD ++ +++ +++ +A
Sbjct: 202 YGDPKSLVEFVHVDNLVQA 220
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 40/161 (24%)
Query: 388 LIYGRTGWIGGLLSKI-------------CEKKGIPFEY-----GKGRLENRSQLLADIQ 429
LI G TG+IG L++ K+ + +G L + L +Q
Sbjct: 2 LILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAVQ 61
Query: 430 NVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIF 489
V V + AG R D+CE +V GT + + +E G+ + + +
Sbjct: 62 GV--DVVIHLAG-APRDTRDFCEV--------DVEGTRNVLEAAKEAGVKHFIFISS-LG 109
Query: 490 EYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY 530
Y H E E P+ Y KA E +L+E
Sbjct: 110 AYGDLHEE-------TEPSPSS---PYLAVKAKTEAVLREA 140
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 0.001
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 400 LSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETI 459
L + + F G R +R +L ++ VF+AA + +V E + E I
Sbjct: 43 LRQEYNDPKLRFFIGDVR--DRERLERAMEQHGVDTVFHAAALK---HVPLVEYNPMEAI 97
Query: 460 RTNVVGTLTLADVCRENG 477
+TNV+GT +A+ ENG
Sbjct: 98 KTNVLGTENVAEAAIENG 115
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 15/112 (13%)
Query: 423 QLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMN 482
Q LA+ + + + A V++ E + + TNV+GT + + ++ L +
Sbjct: 80 QELAE----EVDVIIHNAAT-----VNFVEPYS-DLRATNVLGTREVLRLAKQMKKLPFH 129
Query: 483 Y-ATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF---YSKTKAMVEELLKEY 530
+ +T + E +ED+P G Y+++K + E+L++E
Sbjct: 130 HVSTAYVNGERGGLLEEKPYKL-DEDEPALLGGLPNGYTQSKWLAEQLVREA 180
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 24/138 (17%)
Query: 411 FEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLA 470
++ G L + L P VF+ A N D + NV GT +
Sbjct: 46 VQFHTGDLTDPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYY-------KVNVQGTRNVI 98
Query: 471 DVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG--SFYSKTKAMVEEL 526
+ CR+ G+ L+ + +F G I +E P Y++TKA+ E+L
Sbjct: 99 EACRKCGVKKLVYTSSASVVF-------NGQDIINGDESLPYPDKHQDAYNETKALAEKL 151
Query: 527 LKEYDN------VCTLRV 538
+ + ++ C LR
Sbjct: 152 VLKANDPESGLLTCALRP 169
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 676 | |||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.98 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.98 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.97 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.97 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.97 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.97 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.97 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.96 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.95 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.94 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.94 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.94 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.94 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.94 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.93 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.92 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.92 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.92 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.92 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.91 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.91 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.9 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.89 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.89 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.88 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.88 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.88 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.88 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.88 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.87 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.86 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.86 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.84 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.84 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.84 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.83 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.83 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.83 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.83 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.82 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.82 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.81 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.81 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.81 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.81 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.81 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.81 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.8 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.8 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.8 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.79 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.78 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.78 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.78 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.78 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.77 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.77 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.77 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.77 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.76 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.76 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.75 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.75 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.74 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.74 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.74 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.74 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.74 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.74 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.73 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.73 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.73 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.73 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.73 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.72 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.72 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.72 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.72 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.72 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.71 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.71 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.71 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.71 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.71 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.71 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.71 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.71 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.7 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.7 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.7 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.7 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.69 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.69 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.69 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.69 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.68 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.68 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.68 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.68 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.68 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.68 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.68 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.68 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.68 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.67 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.67 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.67 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.66 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.66 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.65 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.65 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.65 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.65 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.65 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.64 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.64 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.64 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.64 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.63 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.63 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.62 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.62 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.61 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.61 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.6 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.6 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.6 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.6 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.6 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.59 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.59 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.59 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.59 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.59 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.58 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.58 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.58 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.58 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.57 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.57 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.57 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.57 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.57 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.56 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.56 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.56 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.56 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.55 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.55 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.55 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.54 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.54 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.54 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.54 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.54 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.53 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.53 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.53 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.53 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.52 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.52 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.52 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.52 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.52 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.52 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.51 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.51 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.5 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.5 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.5 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.49 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.48 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.48 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.48 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.48 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.48 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.48 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.47 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.46 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.46 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.46 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.46 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.45 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.45 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.45 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.45 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.45 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.44 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.44 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.44 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.44 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.43 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.43 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.43 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.43 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.42 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.42 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.42 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.42 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.41 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.41 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.41 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.41 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.4 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.4 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.39 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.38 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.38 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.38 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.37 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.36 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.36 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.36 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.36 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.35 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.35 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.34 |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-87 Score=748.24 Aligned_cols=663 Identities=87% Similarity=1.376 Sum_probs=547.0
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++++.|+|||||||||||++|++.|++++++++|+++++.........+.......+++++.+|+.|.+.+..++...++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 45677899999999999999999999998789999998753222222222222245799999999999998887766789
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
|+|||+|+....+.++.++.++++.|+.++.+|+++|++.+.+++|||+||..+||.....+..+..|+.+..|.++|+.
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~ 161 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSA 161 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHH
Confidence 99999999987666666777889999999999999999987689999999999999876544334466777778999999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
+|..+|.+++.+.++++++++++||++||||+..+..+++.++..+..+.++++++++.+.++|+|++|+++++..++++
T Consensus 162 sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~ 241 (668)
T PLN02260 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241 (668)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence 99999999999988889999999999999999876678888888888888899999999999999999999999999987
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
...+++||+++++++++.|+++.+++.+|.++...+...+.+++....+.+|++|+++|||+|+++++++|+++++|+++
T Consensus 242 ~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~ 321 (668)
T PLN02260 242 GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTS 321 (668)
T ss_pred CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 76788999999999999999999999999865544555555666666778999999999999999999999999999999
Q ss_pred CCCCcccccccCCCCCccCcCCCccCccCCCCccchhhccCCccccceeecccCCCCCCCCccEEEEEcCCcchhHHHHH
Q 005818 323 NPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSK 402 (676)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlitG~~G~iG~~l~~ 402 (676)
+..||..+.+++.+||+..+.++.... +..++..... +.................+..+||||||||+||||++|++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~mkiLVtGa~G~iG~~l~~ 398 (668)
T PLN02260 322 NPDWWGDVSGALLPHPRMLMMPGVRLF-DGSEEIKLSS--SGSQTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGK 398 (668)
T ss_pred ChhhhhccccccccCCCcccccccccc-cchhhhcccc--ccccccccccccccccCCCCCCceEEEECCCchHHHHHHH
Confidence 999999999999999999888876444 3333322100 1111111111122234445566899999999999999999
Q ss_pred HHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEE
Q 005818 403 ICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMN 482 (676)
Q Consensus 403 ~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~ 482 (676)
.|.++|++|.+..+|++|.+.+.+++...+||+||||||.++.+++++++.++..++++|+.|+.+|+++|++.++++|+
T Consensus 399 ~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~ 478 (668)
T PLN02260 399 LCEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMN 478 (668)
T ss_pred HHHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEE
Confidence 99999999977789999999999999988999999999988655677888899999999999999999999999999999
Q ss_pred eecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCce
Q 005818 483 YATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV 562 (676)
Q Consensus 483 ~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~ 562 (676)
+||++||++....+.+.+.++.|++.+..+.+.||.||+++|++++.+.+..++|+.+++.+..+++.+|+..+++....
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~ 558 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKV 558 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhheEEEEEEecccCCCCccHHHHHHhcccee
Confidence 99999997643222222335666666666669999999999999998888889999999987777788999999988776
Q ss_pred eccCCCccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChh
Q 005818 563 VNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642 (676)
Q Consensus 563 ~~~~~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 642 (676)
+..+.+..+++|++.+++.+++...+|+||+++++.+|+.||++.|++.++....+.++...++.....++|+...||++
T Consensus 559 ~~vp~~~~~~~~~~~~~~~l~~~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~ 638 (668)
T PLN02260 559 VNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDAS 638 (668)
T ss_pred eccCCCceehhhHHHHHHHHHHhCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHH
Confidence 66666788899999998888876667999999999999999999999988644336667666655345666765599999
Q ss_pred HHHhhCCCCCCHHHHHHHhhhccCCC
Q 005818 643 KLKKEFPELLSIKESLIKNVFEPNKK 668 (676)
Q Consensus 643 k~~~~~~~~~~~~~~l~~~~~~~~~~ 668 (676)
|+++.++.+++|+++|++++.+++++
T Consensus 639 k~~~~~~~~~~~~~~l~~~~~~~~~~ 664 (668)
T PLN02260 639 KLKKEFPELLSIKESLIKYVFEPNKK 664 (668)
T ss_pred HHHHhCccccchHHHHHHHHhhhhhh
Confidence 99987777789999999999888765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-55 Score=402.64 Aligned_cols=325 Identities=44% Similarity=0.784 Sum_probs=301.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|++|||||.||||+++++.++++++.++|+.+|..........+......++..++++|+.|.+.+.+++.+..+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999999988999999998877766666656667799999999999999999998779999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+-.+.+.+-.+|..+++.|+.||.+||+++++.....||+|+||..|||+-..... ..+|+++..|.+||++||+.+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~-~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDD-AFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCC-CcccCCCCCCCCCcchhhhhH
Confidence 9999999999999999999999999999999999873359999999999999775421 348999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCc
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~ 247 (676)
+.++++|.+.+|+|++|.|+++-|||.+.+..++|.++..++.|+++++.|+|.+.|+|+||+|-++|+..++++...|+
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE 239 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceeeecCCCCCCcccccCHHHHH-hCCCcccCCHHHHHHHHHHHHhhC
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDT---QIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
+|||+++...+-.|+.+.|++.+|.+.+. .+.++.++|....+|.+|.+|++ +|||.|+.+++++|+++++||.++
T Consensus 240 ~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N 319 (340)
T COG1088 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDN 319 (340)
T ss_pred eEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987653 57889999999999999999975 799999999999999999999999
Q ss_pred CCCccccccc
Q 005818 324 PDWWGDVSGA 333 (676)
Q Consensus 324 ~~~~~~~~~~ 333 (676)
..||+.+...
T Consensus 320 ~~Ww~~l~~~ 329 (340)
T COG1088 320 EWWWEPLKDG 329 (340)
T ss_pred hHHHhhhhcc
Confidence 9999986644
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-51 Score=371.62 Aligned_cols=317 Identities=68% Similarity=1.153 Sum_probs=297.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
...++||||||.||||++.++.+....+....+.++........+.+......++.+++++|+.+...+..++...++|.
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 34589999999999999999999999999999999998888888888888888999999999999999999998889999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+..+.+.++.++.+++..|+.++..|+++++..|++++|||+||..|||++.+.+... |.+.+.|.++|+++|
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~--E~s~~nPtnpyAasK 161 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVG--EASLLNPTNPYAASK 161 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccc--ccccCCCCCchHHHH
Confidence 999999999999999999999999999999999999998899999999999999999877643 888999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
+++|..++.|.+++++|++++|.++||||++.+..++++++..+..+++.++.|+|.+.|+|+|++|+++|+.+++++.+
T Consensus 162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~ 241 (331)
T KOG0747|consen 162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE 241 (331)
T ss_pred HHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCC-----CCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHH
Q 005818 245 VGHVYNIGTKKERRVIDVATDICKLFSL-----NPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKW 319 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~el~~~i~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~ 319 (676)
.+++|||++..+.+..|+++.+++.+.. +....+.+.+++|.+..++.++.+|+++|||+|+++|+++|+++++|
T Consensus 242 ~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~ 321 (331)
T KOG0747|consen 242 LGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEW 321 (331)
T ss_pred ccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHH
Confidence 8999999999999999999999988765 34455677889999999999999999999999999999999999999
Q ss_pred HhhC
Q 005818 320 YISN 323 (676)
Q Consensus 320 ~~~~ 323 (676)
|.++
T Consensus 322 y~~~ 325 (331)
T KOG0747|consen 322 YTKN 325 (331)
T ss_pred HHhh
Confidence 9875
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=349.68 Aligned_cols=301 Identities=31% Similarity=0.486 Sum_probs=263.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||+||||+|.+..|+++ +++|+++|+..+.....-. ...++++++|+.|.+.+.+++++.++|.|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~-----~~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALL-----KLQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhh-----hccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999998 8999999987643321111 0016899999999999999999999999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+||......+.++|.++++.|+.||.+|+++|++++ +++|||.||++|||.+...++ .|+.+..|.||||.||++.
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI---~E~~~~~p~NPYG~sKlm~ 149 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPI---SETSPLAPINPYGRSKLMS 149 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCccc---CCCCCCCCCCcchhHHHHH
Confidence 999999999999999999999999999999999999 999999999999999987554 8999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCC------C---CCChHHHHHHHHHCCC-Cceeec------CCCceEeeeeHHH
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQ------F---PEKLIPKFILLAMKGK-PLPIHG------DGSNVRSYLYCED 231 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~------~---~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~v~v~D 231 (676)
|++++.+.+.+++++++||..++.|... . ...+++.+++.+.... .+.++| +|.-.|+||||.|
T Consensus 150 E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~D 229 (329)
T COG1087 150 EEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229 (329)
T ss_pred HHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhH
Confidence 9999999999999999999999998532 1 2367888888776544 467776 5778899999999
Q ss_pred HHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccC
Q 005818 232 VAEAFDTILHK---GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERV 307 (676)
Q Consensus 232 ~a~ai~~~~~~---~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~ 307 (676)
+|+|++++++. .....+||+++|.-.|+.|+.+.+.+..|.+.+ .+..+.++.+...++.|.+|+++ |||+|++
T Consensus 230 LA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip--~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~ 307 (329)
T COG1087 230 LADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP--VEIAPRRAGDPAILVADSSKARQILGWQPTY 307 (329)
T ss_pred HHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCc--eeeCCCCCCCCceeEeCHHHHHHHhCCCccc
Confidence 99999999864 223368999999999999999999999997654 56678888888899999999985 9999999
Q ss_pred -CHHHHHHHHHHHHh
Q 005818 308 -TWEEGLQKTMKWYI 321 (676)
Q Consensus 308 -~~~~~l~~~~~~~~ 321 (676)
++++.++..++|..
T Consensus 308 ~~L~~ii~~aw~W~~ 322 (329)
T COG1087 308 DDLEDIIKDAWDWHQ 322 (329)
T ss_pred CCHHHHHHHHHHHhh
Confidence 99999999999998
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=365.54 Aligned_cols=312 Identities=27% Similarity=0.403 Sum_probs=253.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCC---CCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNP---SRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~---~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+.+|+|||||||||||++|++.|+++ +++|++++|...... ...+.. .....+++++.+|+.|.+.+..++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~-- 88 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC-- 88 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 45689999999999999999999999 688999987542111 100100 111246889999999999999888
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCCh
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 159 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 159 (676)
.++|+|||+|+......+..++....++|+.|+.+|+++|++.+ +++|||+||.+|||.....+. .|+.+..|.++
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~---~e~~~~~p~~~ 164 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPK---IEERIGRPLSP 164 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCC---CCCCCCCCCCh
Confidence 57999999999876655667788889999999999999999987 899999999999997543332 45566778899
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|+.+|..+|.+++.|.++++++++++||++||||+..+. .+++.++..+..++++.++++|.+.++|+|++|+|++
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a 244 (348)
T PRK15181 165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA 244 (348)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 999999999999999888899999999999999986433 4688888888888889999999999999999999999
Q ss_pred HHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCC----CcceeeecCCCCCCcccccCHHHHHh-CCCcccC
Q 005818 236 FDTILHKG---EVGHVYNIGTKKERRVIDVATDICKLFSLNP----DTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERV 307 (676)
Q Consensus 236 i~~~~~~~---~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~ 307 (676)
++.++... ..+++||+++++++|+.|+++.+.+.++... ...+...+.++.....+.+|.+|+++ |||+|++
T Consensus 245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~ 324 (348)
T PRK15181 245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEF 324 (348)
T ss_pred HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCC
Confidence 98877543 2568999999999999999999999887421 11122222333334456789999985 9999999
Q ss_pred CHHHHHHHHHHHHhhCC
Q 005818 308 TWEEGLQKTMKWYISNP 324 (676)
Q Consensus 308 ~~~~~l~~~~~~~~~~~ 324 (676)
+++++|+++++|++.+.
T Consensus 325 sl~egl~~~~~w~~~~~ 341 (348)
T PRK15181 325 DIKEGLKQTLKWYIDKH 341 (348)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998753
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=386.36 Aligned_cols=498 Identities=19% Similarity=0.155 Sum_probs=333.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH------HHHHHHHccCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA------DLVHFILLTEK 81 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~------~~~~~~~~~~~ 81 (676)
|+|||||||||||++|++.|++...+++|++++|.........+.......+++++.+|+.|+ +.+.. + .+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~-l--~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE-L--GD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH-h--cC
Confidence 479999999999999999999533378999999854222111111111125789999999985 34443 3 68
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|+|||+|+..... .......+.|+.++.+++++|++.+ +++|||+||..+||.......+. ....+..+.++|+
T Consensus 78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~-~~~~~~~~~~~Y~ 152 (657)
T PRK07201 78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFRED-DFDEGQGLPTPYH 152 (657)
T ss_pred CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccc-cchhhcCCCCchH
Confidence 99999999976543 2345678999999999999999987 89999999999998754322111 1112233457899
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--C-----hHHHHHHHHH-CCCCceeecCCCceEeeeeHHHHH
Q 005818 162 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--K-----LIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
.+|..+|+++++ ..+++++++||++|||+..... . ++..++.... ....+++++.+....+++|++|++
T Consensus 153 ~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva 229 (657)
T PRK07201 153 RTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVA 229 (657)
T ss_pred HHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHH
Confidence 999999999874 3589999999999999864211 0 1112222221 122234455666778999999999
Q ss_pred HHHHHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCC---Ccc-eeee-----cC-C-------------C----
Q 005818 234 EAFDTILHKGE-VGHVYNIGTKKERRVIDVATDICKLFSLNP---DTQ-IKFV-----EN-R-------------P---- 285 (676)
Q Consensus 234 ~ai~~~~~~~~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~---~~~-~~~~-----~~-~-------------~---- 285 (676)
+++..+++.+. .+++||+++++++++.|+++.+++.+|.+. ... ++.. .. . .
T Consensus 230 ~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (657)
T PRK07201 230 DALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPP 309 (657)
T ss_pred HHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCH
Confidence 99999987643 577999999999999999999999999865 111 0000 00 0 0
Q ss_pred ----CCCcccccCHHHHHh-C---CCcccCCHHHHHHHHHHHHhhCCCCcccccccCCCCCccCcCCCccCccCCCCccc
Q 005818 286 ----FNDQRYFLDVQKLKQ-L---GWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTF 357 (676)
Q Consensus 286 ----~~~~~~~~~~~k~~~-l---g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (676)
.......+|..++++ | |+... .+.+.+.+.++|+.++. .+.... .+
T Consensus 310 ~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~----------~~~~~~--~~------------- 363 (657)
T PRK07201 310 EVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL----------DPDRAR--RR------------- 363 (657)
T ss_pred HHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC----------Chhhhc--cc-------------
Confidence 001122445555543 3 32222 45566666555444431 110000 00
Q ss_pred hhhccCCccccceeecccCCCCCCCCccEEEEEcCCcchhHHHHHHHHHcCCce------------------------ee
Q 005818 358 MLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EY 413 (676)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~ 413 (676)
.......+++++||||+|+||.++++.|+++|++| .+
T Consensus 364 -------------------~~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 424 (657)
T PRK07201 364 -------------------DLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHA 424 (657)
T ss_pred -------------------CcccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEE
Confidence 00001223689999999999999999999999754 45
Q ss_pred ccccCCChHHHHHHhhcc-----CCCEEEECccccCCCCcchh---ccchhhHHhhhhhhHHHHHHHHH----HcC-CcE
Q 005818 414 GKGRLENRSQLLADIQNV-----KPTHVFNAAGVTGRPNVDWC---ETHKPETIRTNVVGTLTLADVCR----ENG-LLM 480 (676)
Q Consensus 414 ~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~~~~~~~~---~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~ 480 (676)
+.+|++|.++++++++.+ ++|+|||+||....+..... .++....+++|+.|+.++++++. +.+ .++
T Consensus 425 ~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~i 504 (657)
T PRK07201 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHV 504 (657)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEE
Confidence 678999999998888754 57999999996421111111 13456778999999998877653 333 478
Q ss_pred EEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHH
Q 005818 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKIS 557 (676)
Q Consensus 481 v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~ 557 (676)
|++||..++.. ....+.|+.||...+.+++.+. ...++++..++|+.+..+.. ..
T Consensus 505 v~isS~~~~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~--~~-- 562 (657)
T PRK07201 505 VNVSSIGVQTN------------------APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMI--AP-- 562 (657)
T ss_pred EEECChhhcCC------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccccc--Cc--
Confidence 88888776631 1223679999999999998863 23589999999999886521 10
Q ss_pred hcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 558 RYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 558 ~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
.... ........+++|+.++.++.+.
T Consensus 563 --~~~~-~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 563 --TKRY-NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred --cccc-cCCCCCCHHHHHHHHHHHHHhC
Confidence 0000 0113467899999999887654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=352.63 Aligned_cols=321 Identities=42% Similarity=0.741 Sum_probs=256.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|++|||||||||||++|++.|+++|+. .+++.++.........+.......+++++.+|++|.+.+.+++...++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999999533 2334454321111111111112246888999999999999999655799999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc--------CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT--------GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
|+|+......+.+++...++.|+.++.+|+++|++. ..+++||++||.++||..... ..+..|+.+..|.+
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~E~~~~~p~s 158 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST-DDFFTETTPYAPSS 158 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC-CCCcCCCCCCCCCC
Confidence 999987655555677889999999999999999863 226799999999999865322 11236777778889
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
.|+.+|..+|.+++.++++++++++++||+++|||+..+..+++.++..+..+.++++++++++.++|+|++|+++++..
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~ 238 (355)
T PRK10217 159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence 99999999999999998888999999999999999986667888888888888888888999999999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc----------ceeeecCCCCCCcccccCHHHHH-hCCCcccC
Q 005818 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT----------QIKFVENRPFNDQRYFLDVQKLK-QLGWYERV 307 (676)
Q Consensus 239 ~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~ 307 (676)
++++...+++||+++++++|+.|+++.+++.++...+. .+.+.+.++.....+.+|++|++ +|||+|++
T Consensus 239 ~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 318 (355)
T PRK10217 239 VATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQE 318 (355)
T ss_pred HHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcC
Confidence 99876667899999999999999999999998753211 12222333434455788999997 59999999
Q ss_pred CHHHHHHHHHHHHhhCCCCccc
Q 005818 308 TWEEGLQKTMKWYISNPDWWGD 329 (676)
Q Consensus 308 ~~~~~l~~~~~~~~~~~~~~~~ 329 (676)
+++++|+++++|+..+..||..
T Consensus 319 ~l~e~l~~~~~~~~~~~~~~~~ 340 (355)
T PRK10217 319 TFESGMRKTVQWYLANESWWKQ 340 (355)
T ss_pred cHHHHHHHHHHHHHhCHHHHhh
Confidence 9999999999999998776633
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=318.70 Aligned_cols=264 Identities=18% Similarity=0.182 Sum_probs=220.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
|+||||||+||||++.+.+|++.|++| .++++|+.|.+.++++|+..+||.|||+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~-- 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI-- 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc--
Confidence 589999999999999999999999854 67899999999999999999999999999998
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC-eeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATG-CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
.|..+.++|..+++.|+.||++|+++|++.|++.+++||| .|||.+...| ..|+.|..|.|+||+||++.|
T Consensus 79 -~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P-------I~E~~~~~p~NPYG~sKlm~E 150 (329)
T COG1087 79 -SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP-------ISETSPLAPINPYGRSKLMSE 150 (329)
T ss_pred -ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc-------cCCCCCCCCCCcchhHHHHHH
Confidence 8999999999999999999999999999999976666666 7888777777 788888899999999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCc--eeccCC-----------CccchhhH
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNK--VVNIPN-----------SMTILDEL 575 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~--~~~~~~-----------~~~~v~D~ 575 (676)
++++++.+..+++++++|.+|+.|.. ..+.+.+.++. ...+++ +|+||.|+
T Consensus 151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL 230 (329)
T COG1087 151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL 230 (329)
T ss_pred HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence 99999988899999999999998754 24445554543 222332 99999999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL 651 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~ 651 (676)
|++++.+++.- .+.+||++++..+|..|+++.+.++.|.+++++-.+.. .........|++|+++.++|.
T Consensus 231 A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR------~GDpa~l~Ad~~kA~~~Lgw~ 304 (329)
T COG1087 231 ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR------AGDPAILVADSSKARQILGWQ 304 (329)
T ss_pred HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCC------CCCCceeEeCHHHHHHHhCCC
Confidence 99999998753 22499999999999999999999999988777433321 222224556999998888777
Q ss_pred C---CHHHHHHHhhhc
Q 005818 652 L---SIKESLIKNVFE 664 (676)
Q Consensus 652 ~---~~~~~l~~~~~~ 664 (676)
| ++++-+++.-..
T Consensus 305 p~~~~L~~ii~~aw~W 320 (329)
T COG1087 305 PTYDDLEDIIKDAWDW 320 (329)
T ss_pred cccCCHHHHHHHHHHH
Confidence 3 677777776544
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=348.48 Aligned_cols=317 Identities=19% Similarity=0.253 Sum_probs=241.6
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-----ccCCCC------------CCCCCCeEEEEec
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-----LKNLNP------------SRLSPNFKFIKGD 66 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~~~------------~~~~~~v~~v~~D 66 (676)
..++|+||||||+||||++|++.|+++ +++|+++++...... ...... .....+++++.+|
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 121 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD 121 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence 356789999999999999999999999 678888775321110 000000 0012368899999
Q ss_pred CCCHHHHHHHHccCCCCEEEEccccCCcCCcCCC---hHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEecccccCCCCC
Q 005818 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGN---SFEFTKNNIYGTHVLLEACKITGQIK-RFIHVSTDEVYGETDE 142 (676)
Q Consensus 67 l~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~SS~~vyg~~~~ 142 (676)
++|++.+.++++..++|+|||+|+......+..+ +...++.|+.|+.+++++|+..+ ++ +||++||.++||....
T Consensus 122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~ 200 (442)
T PLN02572 122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNI 200 (442)
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCC
Confidence 9999999999976689999999987554333333 34567899999999999999987 65 8999999999996532
Q ss_pred CcCCC---C----CCC---CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--------------
Q 005818 143 DAVVG---N----HEA---SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------------- 198 (676)
Q Consensus 143 ~~~~~---~----~e~---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-------------- 198 (676)
...+. . .|+ .+..|.++|+.+|..+|.+++.|++++|++++++|++++|||+....
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~ 280 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG 280 (442)
T ss_pred CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence 11110 0 122 25668889999999999999999999999999999999999986431
Q ss_pred ---ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CC--ceEEEcCCCcccHHHHHHHHHHH---
Q 005818 199 ---KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG--HVYNIGTKKERRVIDVATDICKL--- 269 (676)
Q Consensus 199 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~--~~y~i~~~~~~s~~el~~~i~~~--- 269 (676)
..++.++..+..++++.++++|.+.|+|+||+|++++++.+++++. .+ .+||+++ +.+|+.|+++.+++.
T Consensus 281 ~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~ 359 (442)
T PLN02572 281 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEK 359 (442)
T ss_pred chhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHh
Confidence 3466677778888888889999999999999999999999998642 23 4899986 679999999999998
Q ss_pred hCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccC---CHHHHHHHHHHHHhhCC
Q 005818 270 FSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERV---TWEEGLQKTMKWYISNP 324 (676)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~---~~~~~l~~~~~~~~~~~ 324 (676)
+|.+.+......+........+..|.+|+++|||+|++ ++.+++.+++.||+++.
T Consensus 360 ~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~ 417 (442)
T PLN02572 360 LGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRV 417 (442)
T ss_pred hCCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence 87654322111111222223456789999999999998 89999999999998653
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=341.33 Aligned_cols=318 Identities=42% Similarity=0.725 Sum_probs=252.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++|+ ..|+.+++.................+++++.+|++|.+++.+++...++|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 4799999999999999999999953 245556553211111111111112457889999999999999996667999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc--------CCCceEEEEecccccCCCCCCc-------CCCCCCCC
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT--------GQIKRFIHVSTDEVYGETDEDA-------VVGNHEAS 152 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~v~~SS~~vyg~~~~~~-------~~~~~e~~ 152 (676)
+|+.........++...+++|+.|+.+++++|+.. +.+++|||+||.++||...... .....|+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 99986544445567789999999999999999874 2257999999999998642110 01135677
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
+..|.+.|+.+|..+|.+++.+++.++++++++|++.+|||+..+..+++.++..+..+..+.+++++.+.++|+|++|+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 78899999999999999999998888999999999999999976567888888888888888888999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc------eeeecCCCCCCcccccCHHHHHh-CCCcc
Q 005818 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ------IKFVENRPFNDQRYFLDVQKLKQ-LGWYE 305 (676)
Q Consensus 233 a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~k~~~-lg~~~ 305 (676)
+++++.++++...+++||++++++.++.++++.+++.+|...+.. +.+.+..+.....+.+|++|+++ |||+|
T Consensus 240 a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 319 (352)
T PRK10084 240 ARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKP 319 (352)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCC
Confidence 999999998766678999999999999999999999998532211 12223334444556789999985 99999
Q ss_pred cCCHHHHHHHHHHHHhhCCCC
Q 005818 306 RVTWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~~~~ 326 (676)
+++++++|+++++|++++.+|
T Consensus 320 ~~~l~~~l~~~~~~~~~~~~~ 340 (352)
T PRK10084 320 QETFESGIRKTVEWYLANTEW 340 (352)
T ss_pred cCCHHHHHHHHHHHHHhCHHH
Confidence 999999999999999987544
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=312.36 Aligned_cols=267 Identities=19% Similarity=0.174 Sum_probs=229.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--------------------------ceeeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI--------------------------PFEYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~--------------------------~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
|++|||||+||||++++++++++.. ++.++++|++|.+.+.++++..++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799999999999999999999873 34899999999999999999888999999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
+||-+ .|+.+-.+|..++++|+.||.+|||+++++.. |++|+||+.|||.-... .+..+|.+|..|.|+|
T Consensus 81 fAAES---HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~-----~~~FtE~tp~~PsSPY 152 (340)
T COG1088 81 FAAES---HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD-----DDAFTETTPYNPSSPY 152 (340)
T ss_pred echhc---cccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC-----CCCcccCCCCCCCCCc
Confidence 99998 69999999999999999999999999999974 89999999999864332 2246778899999999
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCC-----CccchhhHHHHHHHHH
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPN-----SMTILDELLPISVEMA 583 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 583 (676)
++||+.++.++++|.+.+|+++++.|.+|-|||.+ ++.+++.++++..+++ +|+||+|-|+++-.++
T Consensus 153 SASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl 232 (340)
T COG1088 153 SASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVL 232 (340)
T ss_pred chhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHH
Confidence 99999999999999999999999999999999973 4667778888777776 9999999999999999
Q ss_pred hcCCC-ceeEccCCCcccHHHHHHHHHhhcCCCCc-----ccccchHhhhhHhccCCC--ccccChhHHHhhCCCC--CC
Q 005818 584 KRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFK-----WTNFTLEEQAKVIVAPRS--NNELDASKLKKEFPEL--LS 653 (676)
Q Consensus 584 ~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~--~~~ld~~k~~~~~~~~--~~ 653 (676)
++... ++||+++++..+-.|+++.|++.+|...+ +..+. -+|.. -..+|.+|+++.++|. .+
T Consensus 233 ~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~--------DRpGHD~RYaid~~Ki~~eLgW~P~~~ 304 (340)
T COG1088 233 TKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE--------DRPGHDRRYAIDASKIKRELGWRPQET 304 (340)
T ss_pred hcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc--------CCCCCccceeechHHHhhhcCCCcCCC
Confidence 98754 59999999999999999999999998755 21111 12222 3467999986666665 59
Q ss_pred HHHHHHHhhhccCC
Q 005818 654 IKESLIKNVFEPNK 667 (676)
Q Consensus 654 ~~~~l~~~~~~~~~ 667 (676)
|++||++|+..+.+
T Consensus 305 fe~GlrkTv~WY~~ 318 (340)
T COG1088 305 FETGLRKTVDWYLD 318 (340)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987655
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=343.07 Aligned_cols=299 Identities=27% Similarity=0.452 Sum_probs=243.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
.|+|||||||||||++|++.|+++ +++|++++|...... ..........+++++.+|+.+.. + .++|+||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~-~~~~~~~~~~~~~~~~~Di~~~~-----~--~~~D~Vi 189 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRK-ENLVHLFGNPRFELIRHDVVEPI-----L--LEVDQIY 189 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccH-hHhhhhccCCceEEEECcccccc-----c--cCCCEEE
Confidence 478999999999999999999999 688888887532111 11111111246888999987653 3 5799999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC-----CCCCCCChhH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA-----SQLLPTNPYS 161 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~Y~ 161 (676)
|+|+.........++...++.|+.|+.+|+++|++.+ .+|||+||.+|||.....+. +|+ .+..|.+.|+
T Consensus 190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~---~E~~~~~~~p~~p~s~Yg 264 (436)
T PLN02166 190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQ---KETYWGNVNPIGERSCYD 264 (436)
T ss_pred ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCC---CccccccCCCCCCCCchH
Confidence 9999866544445778899999999999999999987 48999999999997654332 233 3566788899
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
.+|..+|++++.|+++++++++++|++++|||+... ..+++.++..+..++++.+++++.+.++|+|++|+++++..+
T Consensus 265 ~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~ 344 (436)
T PLN02166 265 EGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVAL 344 (436)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 999999999999998889999999999999998632 357778888888899899899999999999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHH
Q 005818 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMK 318 (676)
Q Consensus 240 ~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~ 318 (676)
++... .++||+++++.+|+.|+++.+++.+|.+.. +.+.+.++.......+|++|+++ |||+|+++++++|+++++
T Consensus 345 ~~~~~-~giyNIgs~~~~Si~ela~~I~~~~g~~~~--i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~ 421 (436)
T PLN02166 345 MEGEH-VGPFNLGNPGEFTMLELAEVVKETIDSSAT--IEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVS 421 (436)
T ss_pred HhcCC-CceEEeCCCCcEeHHHHHHHHHHHhCCCCC--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 98654 569999999999999999999999987543 44444444444556789999986 899999999999999999
Q ss_pred HHhhC
Q 005818 319 WYISN 323 (676)
Q Consensus 319 ~~~~~ 323 (676)
|++.+
T Consensus 422 ~~~~~ 426 (436)
T PLN02166 422 DFRNR 426 (436)
T ss_pred HHHHH
Confidence 99864
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=333.04 Aligned_cols=316 Identities=46% Similarity=0.814 Sum_probs=258.1
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+|||||||||||++++++|+++++.++|+++++.........+.......+++++.+|+.|++++.+++...++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 59999999999999999999986668999888643211111111111124688999999999999999865569999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+....+.+.+++...++.|+.++.+++++|+..+...++|++||..+||...... ...|+.+..|.+.|+.+|..+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~--~~~e~~~~~~~~~Y~~sK~~~e 158 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD--AFTETTPLAPSSPYSASKAASD 158 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC--CcCCCCCCCCCCchHHHHHHHH
Confidence 99876555556777889999999999999999864223899999999999765332 2356677778889999999999
Q ss_pred HHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCce
Q 005818 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHV 248 (676)
Q Consensus 169 ~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~ 248 (676)
.+++.++++.+++++++||+.+|||+..+..+++.++..+..+.++++++++++.++|+|++|+++++..++++...+++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 238 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGET 238 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCce
Confidence 99999988889999999999999998766678888889888888888889999999999999999999999987767789
Q ss_pred EEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCcccCCHHHHHHHHHHHHhhCCCCc
Q 005818 249 YNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDWW 327 (676)
Q Consensus 249 y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~~~~~~~~~~~~ 327 (676)
||+++++++++.|+++.+.+.+|.+.. .+.+.+..+.....+.+|++|++ .|||+|+++++++++++++||+++.-||
T Consensus 239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~ 317 (317)
T TIGR01181 239 YNIGGGNERTNLEVVETILELLGKDED-LITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWWW 317 (317)
T ss_pred EEeCCCCceeHHHHHHHHHHHhCCCcc-cccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999987532 22332333333344568999997 5999999999999999999999887666
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=335.08 Aligned_cols=308 Identities=23% Similarity=0.279 Sum_probs=243.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc---cccCCCC---CCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS---NLKNLNP---SRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~---~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
|+|||||||||||++|++.|+++ +++|++++|..... ....+.. .....+++++.+|++|.+.+.+++...+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 58999999999999999999999 67888888864311 1111100 0112468999999999999999996667
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC---ceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI---KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~---~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
+|+|||+|+........+++...++.|+.|+.+|+++|+..+ + .+|||+||.++||.....+ ..|+.+..|.+
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~---~~E~~~~~p~~ 154 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIP---QNETTPFYPRS 154 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCC---CCCCCCCCCCC
Confidence 899999999876555555667788899999999999999876 4 3899999999999754332 36777888999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ 234 (676)
+|+.||..+|.+++.+++++++++++.|+.++|||+.... ..+..++..+..++. ..+++++.+.++|+||+|+++
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~ 234 (343)
T TIGR01472 155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE 234 (343)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence 9999999999999999988899999999999999974321 234455556666653 445688999999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc-----------------ceeee--cCCCCCCcccccCH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT-----------------QIKFV--ENRPFNDQRYFLDV 295 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~-----------------~~~~~--~~~~~~~~~~~~~~ 295 (676)
+++.+++++. .+.|||++++++|+.|+++.+.+.+|.+... .+... +.++.....+..|.
T Consensus 235 a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 313 (343)
T TIGR01472 235 AMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDA 313 (343)
T ss_pred HHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCH
Confidence 9999998764 4689999999999999999999999865321 01111 12344445567899
Q ss_pred HHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 296 QKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 296 ~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
+|+++ |||+|+++++++|+++++++++
T Consensus 314 ~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 314 TKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 99985 9999999999999999998874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.42 Aligned_cols=312 Identities=22% Similarity=0.337 Sum_probs=238.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC---CCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS---RLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
.+.|+|||||||||||++|++.|++++ +++|++++|..... ..+... ....+++++.+|+.|.+.+.+++ .+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~--~~ 86 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI--KM 86 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHh--hc
Confidence 345789999999999999999999984 47888888753211 111110 12246999999999999999988 67
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCC------------CC
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVG------------NH 149 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~------------~~ 149 (676)
+|+|||+|+.........++.+.+..|+.++.+++++|++.+ ++|||+||.++||...+.+..+ ..
T Consensus 87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~ 164 (386)
T PLN02427 87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLK 164 (386)
T ss_pred CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccc
Confidence 999999999765433344566677899999999999999866 7999999999999754322100 01
Q ss_pred CCCC-------CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC-----------CChHHHHHHHHHCC
Q 005818 150 EASQ-------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----------EKLIPKFILLAMKG 211 (676)
Q Consensus 150 e~~~-------~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~-----------~~~~~~~~~~~~~~ 211 (676)
|+.. ..|.++|+.+|..+|++++.++++++++++++||++||||+... ..+++.++..+..+
T Consensus 165 e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (386)
T PLN02427 165 EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 244 (386)
T ss_pred ccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence 1111 12456899999999999999988889999999999999997521 23566667778888
Q ss_pred CCceeecCCCceEeeeeHHHHHHHHHHHHhcCC--CCceEEEcCC-CcccHHHHHHHHHHHhCCCCCcc---ee--eecC
Q 005818 212 KPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE--VGHVYNIGTK-KERRVIDVATDICKLFSLNPDTQ---IK--FVEN 283 (676)
Q Consensus 212 ~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~~~~---~~--~~~~ 283 (676)
+++.+++++.+.++|+||+|++++++.+++++. .+++||++++ +++|+.|+++.+.+.+|...... .. ..+.
T Consensus 245 ~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~ 324 (386)
T PLN02427 245 EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSS 324 (386)
T ss_pred CCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCc
Confidence 888888888999999999999999999998753 4679999987 58999999999999988521100 00 0111
Q ss_pred C------CCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 284 R------PFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 284 ~------~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
. .........|.+|+++ |||+|+++++++|+++++|+...
T Consensus 325 ~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~ 371 (386)
T PLN02427 325 KEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT 371 (386)
T ss_pred ccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence 1 1123455679999985 99999999999999999998763
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=338.59 Aligned_cols=302 Identities=27% Similarity=0.437 Sum_probs=241.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
.|+|||||||||||++|++.|+++ +++|+++++..... ...........+++++.+|+.++. + .++|+||
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~-~~~~~~~~~~~~~~~i~~D~~~~~-----l--~~~D~Vi 188 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGR-KENVMHHFSNPNFELIRHDVVEPI-----L--LEVDQIY 188 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccc-hhhhhhhccCCceEEEECCccChh-----h--cCCCEEE
Confidence 479999999999999999999999 67888887643211 111111122356889999997753 3 4799999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCC--CCCCCCCCCChhHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGN--HEASQLLPTNPYSATK 164 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~--~e~~~~~p~~~Y~~sK 164 (676)
|+|+.........++...++.|+.++.+|+++|++.+ + +|||+||..+|+.....+..+. .+..+..+.+.|+.+|
T Consensus 189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK 266 (442)
T PLN02206 189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 266 (442)
T ss_pred EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHH
Confidence 9999766544445778899999999999999999987 4 8999999999987654332111 1123455678899999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC--CCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
..+|++++.|+++++++++++|++++|||+.. ...+++.++..+..++++.+++++++.++|+|++|++++++.++++
T Consensus 267 ~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 267 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc
Confidence 99999999998888999999999999999853 2356778888888888899999999999999999999999999986
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHh
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYI 321 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~ 321 (676)
.. .++||+++++++|+.|+++.+++.++.+.. +.+.+..+.......+|++|+++ |||+|+++++++|+++++|++
T Consensus 347 ~~-~g~yNIgs~~~~sl~Elae~i~~~~g~~~~--i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~ 423 (442)
T PLN02206 347 EH-VGPFNLGNPGEFTMLELAKVVQETIDPNAK--IEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFR 423 (442)
T ss_pred CC-CceEEEcCCCceeHHHHHHHHHHHhCCCCc--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 53 569999999999999999999999986543 44444444344556789999985 999999999999999999998
Q ss_pred hC
Q 005818 322 SN 323 (676)
Q Consensus 322 ~~ 323 (676)
..
T Consensus 424 ~~ 425 (442)
T PLN02206 424 QR 425 (442)
T ss_pred Hh
Confidence 64
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=335.20 Aligned_cols=305 Identities=22% Similarity=0.402 Sum_probs=240.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCC-CHHHHHHHHccCCCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA-SADLVHFILLTEKIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~~~~~~~~~~~d~V 85 (676)
||+|||||||||||++|++.|++++ +++|++++|.... ...+ ....+++++.+|+. +.+.+.+++ .++|+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~~--~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~--~~~d~V 72 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTDR--LGDL---VNHPRMHFFEGDITINKEWIEYHV--KKCDVI 72 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHHH--HHHh---ccCCCeEEEeCCCCCCHHHHHHHH--cCCCEE
Confidence 3689999999999999999999874 5889998875321 1111 11246899999998 777887877 589999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC-C------CCCCC
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS-Q------LLPTN 158 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~-~------~~p~~ 158 (676)
||+|+.........++...++.|+.++.+|+++|++.+ ++|||+||..+||.....+. .|+. + ..|.+
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~---~ee~~~~~~~~~~~p~~ 147 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF---DPEASPLVYGPINKPRW 147 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc---CccccccccCcCCCccc
Confidence 99999866544556788889999999999999999876 79999999999997544322 2222 1 14667
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC--------CCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--------PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+|+.+|..+|+.++.++.+++++++++||+++|||+.. ...+++.++..+..+.++.+++++.+.++|+|++
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence 89999999999999999888999999999999999752 2357788888888898888888899999999999
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCC-CcccHHHHHHHHHHHhCCCCCcc-----eeee--cCC------CCCCccccc
Q 005818 231 DVAEAFDTILHKG---EVGHVYNIGTK-KERRVIDVATDICKLFSLNPDTQ-----IKFV--ENR------PFNDQRYFL 293 (676)
Q Consensus 231 D~a~ai~~~~~~~---~~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~~~~-----~~~~--~~~------~~~~~~~~~ 293 (676)
|++++++.+++++ ..+++||++++ ..+|+.|+++.+.+.++..+... +.+. +.. ......+..
T Consensus 228 D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (347)
T PRK11908 228 DGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVP 307 (347)
T ss_pred HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccC
Confidence 9999999999875 24789999987 47999999999999998654321 1111 100 011124456
Q ss_pred CHHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005818 294 DVQKLK-QLGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 294 ~~~k~~-~lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|.+|++ .|||+|+++++++|+++++|+++..
T Consensus 308 d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~ 339 (347)
T PRK11908 308 KIDNTMQELGWAPKTTMDDALRRIFEAYRGHV 339 (347)
T ss_pred ChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 788887 5999999999999999999998653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=295.90 Aligned_cols=304 Identities=32% Similarity=0.497 Sum_probs=260.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.+.++|+||||.||||+||++.|+.. +++|+++|.... ...+.+........++.+.-|+..+ ++ ..+|.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~hdv~~p-----l~--~evD~ 94 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFT-GRKENLEHWIGHPNFELIRHDVVEP-----LL--KEVDQ 94 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccc-cchhhcchhccCcceeEEEeechhH-----HH--HHhhh
Confidence 34689999999999999999999999 699999998653 3334445556677888888888765 44 67899
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC--CCCCCCChhHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA--SQLLPTNPYSA 162 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~--~~~~p~~~Y~~ 162 (676)
|+|+|+..++.....++...+..|+.|+.+++-.|+..+ +||+++||+.|||++...+..+.... .+..|...|..
T Consensus 95 IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyde 172 (350)
T KOG1429|consen 95 IYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDE 172 (350)
T ss_pred hhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhH
Confidence 999999998766667788899999999999999999988 99999999999999776655332222 45568889999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC--CCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHH
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~ 240 (676)
.|..+|.++.+|.++.|+.+.|.|+.++|||.. ...+.++.+..+++++.++.++|+|.|.|+|.+|+|++++++.++
T Consensus 173 gKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm 252 (350)
T KOG1429|consen 173 GKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM 252 (350)
T ss_pred HHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence 999999999999999999999999999999976 345788889999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHH
Q 005818 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKW 319 (676)
Q Consensus 241 ~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~ 319 (676)
+++..+ .+||++++..|+.|+++.+.+..+... .+.+....+.+......|++++++ |||.|++++.++|..++.|
T Consensus 253 ~s~~~~-pvNiGnp~e~Tm~elAemv~~~~~~~s--~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~ 329 (350)
T KOG1429|consen 253 ESDYRG-PVNIGNPGEFTMLELAEMVKELIGPVS--EIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTY 329 (350)
T ss_pred cCCCcC-CcccCCccceeHHHHHHHHHHHcCCCc--ceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHH
Confidence 987644 699999999999999999999986543 355556666666777889999985 9999999999999999999
Q ss_pred HhhC
Q 005818 320 YISN 323 (676)
Q Consensus 320 ~~~~ 323 (676)
+++.
T Consensus 330 fr~~ 333 (350)
T KOG1429|consen 330 FRER 333 (350)
T ss_pred HHHH
Confidence 9875
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=324.68 Aligned_cols=284 Identities=79% Similarity=1.274 Sum_probs=234.5
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhh
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRT 461 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 461 (676)
.+.||||||||+||||++|++.|+++|++|....+|+.|.+.+...++..+||+||||||.++.+++++++.++..++++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~ 86 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRA 86 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHH
Confidence 34579999999999999999999999999987788999999898888877889999999987544455677889999999
Q ss_pred hhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeec
Q 005818 462 NVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541 (676)
Q Consensus 462 Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 541 (676)
|+.|+.+|+++|++.+++++++||+++|++....|.+.+.++.||+.|..|.+.|+.||+++|++++.+.+.+++|+.+.
T Consensus 87 Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~~~lr~~~~ 166 (298)
T PLN02778 87 NVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMP 166 (298)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhccEEeeeccc
Confidence 99999999999999999999999999997654333333334677776766778999999999999999888889988776
Q ss_pred ccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCccccc
Q 005818 542 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNF 621 (676)
Q Consensus 542 r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~ 621 (676)
+..+...+..|+..++.+.+....+.+++|++|++++++.++++...|+||+++++.+|+.|+++.+++.+|.+.++..+
T Consensus 167 ~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~ 246 (298)
T PLN02778 167 ISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNF 246 (298)
T ss_pred CCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccc
Confidence 66543344578888888887766777999999999999999987666899999999999999999999999987655444
Q ss_pred chHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 622 TLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 622 ~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
...+.......++.+..||++|++++++.. +..+++++..+..+
T Consensus 247 ~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~ 291 (298)
T PLN02778 247 TLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPN 291 (298)
T ss_pred cHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHH
Confidence 443333445667777789999999999986 66677777755544
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=328.84 Aligned_cols=310 Identities=22% Similarity=0.275 Sum_probs=246.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc---cccCCCC--CCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS---NLKNLNP--SRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
++++||||||+||||++|++.|+++ +++|++++|..... ....+.. .....+++++.+|++|.+.+.+++...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 4578999999999999999999999 68888887754211 1111110 011346899999999999999998666
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-----eEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-----RFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-----~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
++|+|||+|+.........++...++.|+.|+.+|+++|+..+ ++ +||++||.++||.... +..|+.+..
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~----~~~E~~~~~ 157 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPP----PQSETTPFH 157 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCC----CCCCCCCCC
Confidence 7999999999876555556677788999999999999999876 44 8999999999998654 236777888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCCcee-ecCCCceEeeeeHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKPLPI-HGDGSNVRSYLYCED 231 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D 231 (676)
|.++|+.+|..+|.+++.++++++++++..|+.++|||+.... ..+..++..+..+..+.+ ++++++.++|+|++|
T Consensus 158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D 237 (340)
T PLN02653 158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD 237 (340)
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence 9999999999999999999998999999999999999975432 234445556667765554 488999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHHh-CCCcccCC
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLKQ-LGWYERVT 308 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~~~~~ 308 (676)
++++++.++++.. ++.||+++++++|+.|+++.+.+.+|.+....+.+.+ ..+.......+|.+|+++ |||+|+++
T Consensus 238 ~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~ 316 (340)
T PLN02653 238 YVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVG 316 (340)
T ss_pred HHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCC
Confidence 9999999998754 5789999999999999999999999864222222222 234444556789999975 99999999
Q ss_pred HHHHHHHHHHHHhhC
Q 005818 309 WEEGLQKTMKWYISN 323 (676)
Q Consensus 309 ~~~~l~~~~~~~~~~ 323 (676)
++++|+++++|+++.
T Consensus 317 l~~gi~~~~~~~~~~ 331 (340)
T PLN02653 317 FEQLVKMMVDEDLEL 331 (340)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998853
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=331.21 Aligned_cols=313 Identities=25% Similarity=0.375 Sum_probs=248.2
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
++++|+||||||+||||+++++.|+++ +++|++++|......... .......+++++.+|++|.+.+.+++...++|
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 77 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLF-ELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPE 77 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHH-HHHhhcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence 356789999999999999999999999 678888887643221100 00011235778999999999999999766799
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|||+|+......+..++...++.|+.++.+++++|+..+.+++||++||..+|+..... .+..|+.+..|.++|+.+
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~--~~~~e~~~~~p~~~Y~~s 155 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWV--WGYRETDPLGGHDPYSSS 155 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCC--CCCccCCCCCCCCcchhH
Confidence 999999976665666788889999999999999999876546899999999999875321 123566677788999999
Q ss_pred HHHHHHHHHHHHHHc-------CCCEEEEeeCCccCCCCC-CCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSY-------GLPVITTRGNNVYGPNQF-PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 164 K~~~E~~~~~~~~~~-------~l~~~ilR~~~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|..+|.+++.+++++ +++++++||+++|||+.. ...+++.+++.+..++.+.+ +++.++++|+|++|++++
T Consensus 156 K~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a 234 (349)
T TIGR02622 156 KACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSG 234 (349)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHH
Confidence 999999999887764 899999999999999863 24678899999988887765 678899999999999999
Q ss_pred HHHHHhcC-----CCCceEEEcCC--CcccHHHHHHHHHHHhCCCCCcceee--ecCCCCCCcccccCHHHHHh-CCCcc
Q 005818 236 FDTILHKG-----EVGHVYNIGTK--KERRVIDVATDICKLFSLNPDTQIKF--VENRPFNDQRYFLDVQKLKQ-LGWYE 305 (676)
Q Consensus 236 i~~~~~~~-----~~~~~y~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~-lg~~~ 305 (676)
++.++++. ..+++|||+++ +++++.|+++.+.+.++... ..+.. .+.++.......+|.+|+++ |||+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p 313 (349)
T TIGR02622 235 YLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDD-AEWEDDSDLNHPHEARLLKLDSSKARTLLGWHP 313 (349)
T ss_pred HHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCC-CceeeccCCCCCcccceeecCHHHHHHHhCCCC
Confidence 99887642 23579999975 68999999999998776321 12222 11233333456789999985 99999
Q ss_pred cCCHHHHHHHHHHHHhhC
Q 005818 306 RVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~ 323 (676)
+++++++|+++++|+++.
T Consensus 314 ~~~l~~gi~~~i~w~~~~ 331 (349)
T TIGR02622 314 RWGLEEAVSRTVDWYKAW 331 (349)
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999999999874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=304.13 Aligned_cols=307 Identities=21% Similarity=0.202 Sum_probs=232.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
++++|+|||||||||+||++.|+++ ||+|.+..|....... .-.......++.+.+.+||.|++++.+++ .+||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai--~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI--DGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH--hCCC
Confidence 5689999999999999999999999 5666666665433211 11122345667999999999999999999 8999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCC--CCcCCCCCCCCCCCC-----
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETD--EDAVVGNHEASQLLP----- 156 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~--~~~~~~~~e~~~~~p----- 156 (676)
+|||+|.++.++... ...+++++.|.|+.|++++|++...++|||++||.+....+. .......+|+...++
T Consensus 81 gVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~ 159 (327)
T KOG1502|consen 81 GVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC 159 (327)
T ss_pred EEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence 999999998875433 344899999999999999999988899999999966654432 222223344433322
Q ss_pred -CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 157 -TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 157 -~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
.++|..+|.++|+.+++++++.+++.+++.|+.|+||...+. +....+....++|..-.. ......|+||+|+|.
T Consensus 160 ~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~ 236 (327)
T KOG1502|consen 160 KKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVDVRDVAL 236 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEeHHHHHH
Confidence 258999999999999999999999999999999999998663 333445555566643222 223445999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceee-ecCC-CCCCcccccCHHHHHhCCCcccCCHHHH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKF-VENR-PFNDQRYFLDVQKLKQLGWYERVTWEEG 312 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~-~~~~~~~~~~~~k~~~lg~~~~~~~~~~ 312 (676)
|++.++|++...++|.+.+. ..++.|+++.+.+.++..+ ++. .+.. ......+.++++|+++||+....++++.
T Consensus 237 AHv~a~E~~~a~GRyic~~~-~~~~~ei~~~l~~~~P~~~---ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~l~e~ 312 (327)
T KOG1502|consen 237 AHVLALEKPSAKGRYICVGE-VVSIKEIADILRELFPDYP---IPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFRPLEET 312 (327)
T ss_pred HHHHHHcCcccCceEEEecC-cccHHHHHHHHHHhCCCCC---CCCCCCccccccccccccccHHHHhcccceecChHHH
Confidence 99999999999999977765 4669999999999886543 111 1111 1122334689999999996666699999
Q ss_pred HHHHHHHHhhCC
Q 005818 313 LQKTMKWYISNP 324 (676)
Q Consensus 313 l~~~~~~~~~~~ 324 (676)
+.++++++++..
T Consensus 313 ~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 313 LSDTVESLREKG 324 (327)
T ss_pred HHHHHHHHHHhc
Confidence 999999998753
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=322.42 Aligned_cols=303 Identities=24% Similarity=0.297 Sum_probs=238.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|.++ +++|++++|..... . .. ....++++.+|++|.+.+..++ .++|+||
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~-~---~~--~~~~~~~~~~Dl~d~~~~~~~~--~~~D~Vi 90 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEH-M---SE--DMFCHEFHLVDLRVMENCLKVT--KGVDHVF 90 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccc-c---cc--ccccceEEECCCCCHHHHHHHH--hCCCEEE
Confidence 589999999999999999999999 68888888753210 0 00 1113578899999999888887 6899999
Q ss_pred EccccCCcC-CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCc-CCCCCCC--CCCCCCChhHH
Q 005818 87 HFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA-VVGNHEA--SQLLPTNPYSA 162 (676)
Q Consensus 87 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~-~~~~~e~--~~~~p~~~Y~~ 162 (676)
|+|+..... ....++...+..|+.++.+|+++|++.+ +++|||+||.++|+...... ..+..|+ .+..|.++|+.
T Consensus 91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~ 169 (370)
T PLN02695 91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL 169 (370)
T ss_pred EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHH
Confidence 999875421 1223445667889999999999999887 89999999999999764321 1122333 36778899999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHC-CCCceeecCCCceEeeeeHHHHHHHHH
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMK-GKPLPIHGDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~ai~ 237 (676)
+|..+|++++.++++++++++++||+++|||+.... .+...++..+.. +.++.+++++++.++|+|++|++++++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~ 249 (370)
T PLN02695 170 EKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVL 249 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHH
Confidence 999999999999888899999999999999975321 245566666654 467888899999999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHH
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKT 316 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~ 316 (676)
.++++. .+++||+++++++|+.|+++.+.+..|.+.+. ...+. +.......+|++|+++ |||+|+++++++|+++
T Consensus 250 ~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i--~~~~~-~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~ 325 (370)
T PLN02695 250 RLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPI--KHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRIT 325 (370)
T ss_pred HHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCc--eecCC-CCCccccccCHHHHHHhcCCCCCCCHHHHHHHH
Confidence 988765 36789999999999999999999998865432 22221 2122345689999985 9999999999999999
Q ss_pred HHHHhhCC
Q 005818 317 MKWYISNP 324 (676)
Q Consensus 317 ~~~~~~~~ 324 (676)
++|+++..
T Consensus 326 ~~~~~~~~ 333 (370)
T PLN02695 326 YFWIKEQI 333 (370)
T ss_pred HHHHHHHH
Confidence 99998754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=349.23 Aligned_cols=310 Identities=23% Similarity=0.371 Sum_probs=245.8
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHH-HHHHHccC
Q 005818 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADL-VHFILLTE 80 (676)
Q Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~-~~~~~~~~ 80 (676)
|+...+|+|||||||||||++|++.|++++ +++|++++|..... ..+ ....+++++.+|++|... +.+++ .
T Consensus 310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~~--~~~---~~~~~~~~~~gDl~d~~~~l~~~l--~ 381 (660)
T PRK08125 310 CSAKRRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDAI--SRF---LGHPRFHFVEGDISIHSEWIEYHI--K 381 (660)
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchhh--hhh---cCCCceEEEeccccCcHHHHHHHh--c
Confidence 455677899999999999999999999863 68999998854211 111 112468999999998665 56677 6
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCC------C
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ------L 154 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~------~ 154 (676)
++|+|||+|+.........++...++.|+.++.+++++|++.+ ++|||+||.++||.....+. +|+.+ .
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~---~E~~~~~~~~p~ 456 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYF---DEDTSNLIVGPI 456 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCc---CccccccccCCC
Confidence 8999999999877655556777889999999999999999976 79999999999997543332 44432 1
Q ss_pred -CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC--------CCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 155 -LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--------PEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 155 -~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
.|.+.|+.+|..+|++++.|+++++++++++||+++|||+.. ...+++.++..+..++++.+++++.+.++
T Consensus 457 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd 536 (660)
T PRK08125 457 NKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRC 536 (660)
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeec
Confidence 355689999999999999998888999999999999999753 23567888888888888888899999999
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcceeeecC---C-----------CCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKK-ERRVIDVATDICKLFSLNPDTQIKFVEN---R-----------PFN 287 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~---~-----------~~~ 287 (676)
|+|++|++++++.+++++. .+++||+++++ .+|+.|+++.+.+.+|..+. .+...+. . ...
T Consensus 537 ~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (660)
T PRK08125 537 FTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPL-RDHFPPFAGFRVVESSSYYGKGYQD 615 (660)
T ss_pred eeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcc-cccCCcccccccccccccccccccc
Confidence 9999999999999998742 36799999985 79999999999999985321 1111000 0 011
Q ss_pred CcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhCCC
Q 005818 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPD 325 (676)
Q Consensus 288 ~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~ 325 (676)
.....+|.+|+++ |||+|+++++++|+++++|++++.+
T Consensus 616 ~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 616 VEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred ccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence 2234579999985 9999999999999999999997643
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=319.48 Aligned_cols=302 Identities=19% Similarity=0.220 Sum_probs=226.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
++++||||||+||||++|++.|+++ +++|++++|.........+.. .....+++++.+|++|.+.+.+++ .++|+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~ 84 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI--DGCDG 84 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH--hcCCE
Confidence 4678999999999999999999999 678888877542111000000 011236889999999999999998 68999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecc-cccCCCCCCcCCCCCCCC------CCCCC
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTD-EVYGETDEDAVVGNHEAS------QLLPT 157 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~-~vyg~~~~~~~~~~~e~~------~~~p~ 157 (676)
|||+|+... .++...+++|+.++.+++++|++.+ +++|||+||. ++||..........+|++ +..|.
T Consensus 85 Vih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~ 158 (342)
T PLN02214 85 VFHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK 158 (342)
T ss_pred EEEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccc
Confidence 999999642 4567889999999999999999987 8999999995 688754322111124442 34467
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
++|+.+|..+|++++.+++++|++++++||++||||+..+. ..+..++ ....+.... . +.+.++|+|++|+|++
T Consensus 159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~--~~~~~~~i~V~Dva~a 234 (342)
T PLN02214 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-Y--ANLTQAYVDVRDVALA 234 (342)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-C--CCCCcCeeEHHHHHHH
Confidence 88999999999999999888899999999999999986432 2222333 334454332 2 3457899999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQK 315 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~ 315 (676)
++.+++++..++.||+++ ...++.|+++.+++.++.. +......+..+.....+.+|++|+++|||+| .+++++|++
T Consensus 235 ~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p-~~lee~i~~ 311 (342)
T PLN02214 235 HVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY-PLPTKCKDEKNPRAKPYKFTNQKIKDLGLEF-TSTKQSLYD 311 (342)
T ss_pred HHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC-CCCCCCccccCCCCCccccCcHHHHHcCCcc-cCHHHHHHH
Confidence 999999876677999987 5789999999999998631 1111111222223345568999999999999 499999999
Q ss_pred HHHHHhhCC
Q 005818 316 TMKWYISNP 324 (676)
Q Consensus 316 ~~~~~~~~~ 324 (676)
+++|+++..
T Consensus 312 ~~~~~~~~~ 320 (342)
T PLN02214 312 TVKSLQEKG 320 (342)
T ss_pred HHHHHHHcC
Confidence 999999753
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=298.45 Aligned_cols=268 Identities=22% Similarity=0.240 Sum_probs=221.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee---ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY---GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRT 461 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~---~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 461 (676)
|+|||||++|++|+.|++.|. .+++|.. -..|++|++.+.+++...+||+|||+|+++ +++.++.+++..+.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt---~vD~aE~~~e~A~~v 76 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYT---AVDKAESEPELAFAV 76 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhhCCCEEEECcccc---ccccccCCHHHHHHh
Confidence 469999999999999999998 5567643 357999999999999999999999999999 999999999999999
Q ss_pred hhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHc-cCeEEEEeee
Q 005818 462 NVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRM 540 (676)
Q Consensus 462 Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~-~~~~~l~~~~ 540 (676)
|..|+.+++++|++.|.++||+||++||.+....| ..|+++..|.+.||+||+.+|+.++++ .+...+|+.+
T Consensus 77 Na~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~-------Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtsw 149 (281)
T COG1091 77 NATGAENLARAAAEVGARLVHISTDYVFDGEKGGP-------YKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSW 149 (281)
T ss_pred HHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCC-------CCCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeee
Confidence 99999999999999999999999999997655444 445557778899999999999999887 6777888888
Q ss_pred cccCCCCChHHHHHHHHhcCcee----ccCCCccchhhHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCC
Q 005818 541 PISSDLNNPRNFITKISRYNKVV----NIPNSMTILDELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPG 615 (676)
Q Consensus 541 ~r~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~ 615 (676)
+....--++...+.++++.+..+ ++.++|+++.|+|+++..++.... .|+||+++...+|+.||++.|.+..+.+
T Consensus 150 v~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~ 229 (281)
T COG1091 150 VYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVD 229 (281)
T ss_pred eecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCC
Confidence 77665544433445555444433 444599999999999999998874 4699999999999999999999999976
Q ss_pred Cccc-ccchHhhhhHhccCCC-ccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 616 FKWT-NFTLEEQAKVIVAPRS-NNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 616 ~~~~-~~~~~~~~~~~~~~~~-~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
..+. ++...+++. .++|+ ++.||+.|+++.++.. |.|+++++.++.+.
T Consensus 230 ~~v~~~~~~~~~~~--~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~~ 280 (281)
T COG1091 230 GEVIEPIASAEYPT--PAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDEL 280 (281)
T ss_pred ccccccccccccCc--cCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhhc
Confidence 6443 444443433 44444 8999999998888875 89999999987653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=313.81 Aligned_cols=282 Identities=21% Similarity=0.223 Sum_probs=226.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||+||||++|++.|+++| +|++++|.. ..+.+|++|.+.+.+++...++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~-----------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHS-----------------TDYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEecccc-----------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 479999999999999999999984 477777742 124689999999999986668999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+....+.+..++......|+.++.+|+++|+..+ .+|||+||..||++....+ ..|+++..|.++|+.+|..+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~p---~~E~~~~~P~~~Yg~sK~~~ 135 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDIP---WQETDATAPLNVYGETKLAG 135 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCCC---cCCCCCCCCCCHHHHHHHHH
Confidence 999988777777888888999999999999999988 4899999999998865433 36778888999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC--CCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD--GSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
|++++.++ .+.+++|++++|||+. .++++.+++.+..++++.++++ +.+.+.+.+++|++.++..+++.+..
T Consensus 136 E~~~~~~~----~~~~ilR~~~vyGp~~--~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~ 209 (299)
T PRK09987 136 EKALQEHC----AKHLIFRTSWVYAGKG--NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV 209 (299)
T ss_pred HHHHHHhC----CCEEEEecceecCCCC--CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC
Confidence 99998754 4579999999999976 4678888888888888888887 56656666778888888888766555
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHh---CCCCCc-ceeeec-----CCCCCCcccccCHHHHHh-CCCcccCCHHHHHHH
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLF---SLNPDT-QIKFVE-----NRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQK 315 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~---g~~~~~-~~~~~~-----~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~ 315 (676)
+++||+++++.+|+.|+++.+.+.+ |.+.+. .+...+ ..........+|++|+++ |||+|. +|+++|++
T Consensus 210 ~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~ 288 (299)
T PRK09987 210 AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKR 288 (299)
T ss_pred CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHH
Confidence 5799999999999999999997754 433211 111111 112223445789999986 999986 99999999
Q ss_pred HHHHHh
Q 005818 316 TMKWYI 321 (676)
Q Consensus 316 ~~~~~~ 321 (676)
+++.+.
T Consensus 289 ~~~~~~ 294 (299)
T PRK09987 289 MLTELF 294 (299)
T ss_pred HHHHHh
Confidence 997653
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=316.97 Aligned_cols=312 Identities=29% Similarity=0.460 Sum_probs=242.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCC--CCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNP--SRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
|++++|||||||||||++|++.|+++ +++|++++|...... ...... .....+++++.+|+.|++.+..++...
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 55689999999999999999999999 578888876432110 000000 011346889999999999999988656
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChh
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 160 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 160 (676)
++|+|||+|+.........++...++.|+.++.+++++|++.+ +++||++||.++|+.....+ .+|+.+..|.++|
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~---~~E~~~~~~~~~Y 156 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVP---CTEEFPLSATNPY 156 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC---CCCCCCCCCCCHH
Confidence 8999999999765444556777899999999999999999876 88999999999998654433 3677888889999
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCEEEEeeCCccCCCCC----------CCChHHHHHHHHHCCC--Cceeec------CCC
Q 005818 161 SATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMKGK--PLPIHG------DGS 221 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~----------~~~~~~~~~~~~~~~~--~~~~~~------~~~ 221 (676)
+.+|..+|++++.+++. .+++++++|++++||++.. +..+++. +..+..++ .+.+++ +|.
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~g~ 235 (352)
T PLN02240 157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPY-VQQVAVGRRPELTVFGNDYPTKDGT 235 (352)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHH-HHHHHhCCCCceEEeCCCCCCCCCC
Confidence 99999999999988755 5799999999999997421 1223333 34444333 344554 678
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC----C-CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHH
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG----E-VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQ 296 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~----~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (676)
+.++|+|++|++++++.++++. . .+++||+++++++|+.|+++.+++.+|.+.+ +...+..+.....+..|++
T Consensus 236 ~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~ 313 (352)
T PLN02240 236 GVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIP--LKLAPRRPGDAEEVYASTE 313 (352)
T ss_pred EEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCC--ceeCCCCCCChhhhhcCHH
Confidence 9999999999999998887642 2 3579999999999999999999999987544 3333444444455668999
Q ss_pred HHHh-CCCcccCCHHHHHHHHHHHHhhCCC
Q 005818 297 KLKQ-LGWYERVTWEEGLQKTMKWYISNPD 325 (676)
Q Consensus 297 k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~ 325 (676)
|+++ |||+|+++++++|+++++|++++..
T Consensus 314 k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~ 343 (352)
T PLN02240 314 KAEKELGWKAKYGIDEMCRDQWNWASKNPY 343 (352)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 9985 9999999999999999999998753
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=314.37 Aligned_cols=305 Identities=20% Similarity=0.213 Sum_probs=230.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCC-CCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNL-NPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+|+||||||+||||++|++.|+++ +++|++++|...... ...+ .......+++++.+|++|.+.+.+++ .++|+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 80 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCET 80 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCCE
Confidence 579999999999999999999999 567776666532111 0000 00111246899999999999999998 67999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCC--CcCCCCCCCCCCCC------
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDE--DAVVGNHEASQLLP------ 156 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~--~~~~~~~e~~~~~p------ 156 (676)
|||+|+........+++...++.|+.++.+++++|.+...+++||++||.++|+.... ......+|+.+..|
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~ 160 (325)
T PLN02989 81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEER 160 (325)
T ss_pred EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccc
Confidence 9999997654444455678899999999999999987533689999999888765421 11122355555544
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
.++|+.+|..+|.+++.|.++++++++++||+++|||+..+. .++..++..+..++.+. + .+.++|+|++|+|++
T Consensus 161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a 236 (325)
T PLN02989 161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALA 236 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHH
Confidence 367999999999999999988899999999999999987543 35555666666665432 2 345789999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC--CCCCCcccccCHHHHHhCCCcccCCHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN--RPFNDQRYFLDVQKLKQLGWYERVTWEEGL 313 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l 313 (676)
++.+++++..+++||++ +..+|+.|+++.+.+.++... +...+. .+.....+..|.+|+++|||+|+++++++|
T Consensus 237 ~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi 312 (325)
T PLN02989 237 HVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC---IADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSL 312 (325)
T ss_pred HHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC---CCCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHH
Confidence 99999876656799995 568999999999999987321 111111 111123567889999899999999999999
Q ss_pred HHHHHHHhhC
Q 005818 314 QKTMKWYISN 323 (676)
Q Consensus 314 ~~~~~~~~~~ 323 (676)
+++++|++..
T Consensus 313 ~~~~~~~~~~ 322 (325)
T PLN02989 313 RDTVLSLKEK 322 (325)
T ss_pred HHHHHHHHHh
Confidence 9999999864
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=292.77 Aligned_cols=268 Identities=22% Similarity=0.262 Sum_probs=222.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee------------------ccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY------------------GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~------------------~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
++|+||||.||||++|++.|..+||+|.. -..++.-.+-+..++..+ |.|+|+|++.
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~ev--D~IyhLAapa--- 102 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEV--DQIYHLAAPA--- 102 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHh--hhhhhhccCC---
Confidence 68999999999999999999999987611 112233344466688888 9999999988
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
++.....+|..++..|+.++.+++..|++.+.++++.||+.|||++..+|.- ..+...-.|..|.++|+..|..+|.+
T Consensus 103 sp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~--e~ywg~vnpigpr~cydegKr~aE~L 180 (350)
T KOG1429|consen 103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQV--ETYWGNVNPIGPRSCYDEGKRVAETL 180 (350)
T ss_pred CCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCc--cccccccCcCCchhhhhHHHHHHHHH
Confidence 4556778899999999999999999999999999999999999998888822 22333345778899999999999999
Q ss_pred HHHccCeEEEEeeecccCCCCChH----------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcCCCcee
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRNLSGIW 591 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~~g~y 591 (676)
+-+|.+..|+.+++.|++|.|||+ .|+.+.+++.+...+++ +|+||.|++++++.+++++..+.+
T Consensus 181 ~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~pv 260 (350)
T KOG1429|consen 181 CYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGPV 260 (350)
T ss_pred HHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCCc
Confidence 999999999999999999999998 68899999998777766 999999999999999999999999
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhcc
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEP 665 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~ 665 (676)
|++||+.+|+.|||+++.+..+....++.......++. ...-|++|+++.++|. .+++|+|..++...
T Consensus 261 NiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~------kR~pDit~ake~LgW~Pkv~L~egL~~t~~~f 330 (350)
T KOG1429|consen 261 NIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPR------KRKPDITKAKEQLGWEPKVSLREGLPLTVTYF 330 (350)
T ss_pred ccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCcc------ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHH
Confidence 99999999999999999999976554433332222111 2234999998877776 48999999988643
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=311.99 Aligned_cols=286 Identities=23% Similarity=0.411 Sum_probs=228.7
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEccc
Q 005818 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAA 90 (676)
Q Consensus 11 lVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 90 (676)
||||||||||++|++.|+++ +++|++..+. ..+|+.|.+.+.+++...++|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 69999999999999999998 4555544321 1489999999999987778999999999
Q ss_pred cCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC----CCCCCC-hhHHHH
Q 005818 91 QTHV-DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPTN-PYSATK 164 (676)
Q Consensus 91 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~-~Y~~sK 164 (676)
.... .....++.+.++.|+.++.+|+++|++.+ +++|||+||..||+.....+. +|++ +..|.+ .|+.+|
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~---~E~~~~~~~~~p~~~~Y~~sK 134 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPI---PETALLTGPPEPTNEWYAIAK 134 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCC---CHHHhccCCCCCCcchHHHHH
Confidence 7542 22345667889999999999999999987 899999999999997554333 4443 444544 599999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHH----HHCCCCcee-ecCCCceEeeeeHHHHHHH
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILL----AMKGKPLPI-HGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~v~v~D~a~a 235 (676)
..+|++++.+++.++++++++||+.+|||+... ..+++.++.. ...+.++.+ ++++.+.++|+|++|++++
T Consensus 135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~ 214 (306)
T PLN02725 135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA 214 (306)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence 999999999988889999999999999997531 2344554433 345555555 6788899999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQK 315 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~ 315 (676)
++.++++....+.||++++.++|+.|+++.+++.++.+.. +.+.+..+.......+|++|+++|||+|+++++++|++
T Consensus 215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~ 292 (306)
T PLN02725 215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGE--LVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQE 292 (306)
T ss_pred HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCc--eeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHH
Confidence 9999987655678999999999999999999999986543 33333333334456789999989999999999999999
Q ss_pred HHHHHhhCC
Q 005818 316 TMKWYISNP 324 (676)
Q Consensus 316 ~~~~~~~~~ 324 (676)
+++|++++.
T Consensus 293 ~~~~~~~~~ 301 (306)
T PLN02725 293 TYKWYLENY 301 (306)
T ss_pred HHHHHHhhh
Confidence 999999864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=313.97 Aligned_cols=270 Identities=26% Similarity=0.368 Sum_probs=195.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec---cccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG---KGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRT 461 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~---~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 461 (676)
||||||||+|+||++|.+.|.++|++|... ..|++|.+.+.++++..+||+||||||.+ +++.|+.+|+..+++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~---~~~~ce~~p~~a~~i 77 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYT---NVDACEKNPEEAYAI 77 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE---------HHHHHHSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceee---cHHhhhhChhhhHHH
Confidence 799999999999999999999999887554 78999999999999999999999999998 899999999999999
Q ss_pred hhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHH-ccCeEEEEeee
Q 005818 462 NVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE-YDNVCTLRVRM 540 (676)
Q Consensus 462 Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~-~~~~~~l~~~~ 540 (676)
|+.++.+|+++|.+.++++||+||+.||++....| | .|+++..|.+.||++|+++|+.+++ ..+...+|+.+
T Consensus 78 N~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~------y-~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~ 150 (286)
T PF04321_consen 78 NVDATKNLAEACKERGARLIHISTDYVFDGDKGGP------Y-TEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSW 150 (286)
T ss_dssp HTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSS------B--TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-S
T ss_pred hhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccc------c-ccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecce
Confidence 99999999999999999999999999997665444 4 4555667889999999999999987 45555666555
Q ss_pred cccCCCCChHHHH-HHHHhcCceeccCC---CccchhhHHHHHHHHHhcCCC-----ceeEccCCCcccHHHHHHHHHhh
Q 005818 541 PISSDLNNPRNFI-TKISRYNKVVNIPN---SMTILDELLPISVEMAKRNLS-----GIWNFTNPGVVSHNEILEMYKAY 611 (676)
Q Consensus 541 ~r~~~~~g~~~~~-~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~~~-----g~yn~~~~~~~s~~e~~~~i~~~ 611 (676)
+.+..--+....+ ..+..++......+ +++|++|+|+++..++++... |+||+++++.+|..||++.+++.
T Consensus 151 ~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~ 230 (286)
T PF04321_consen 151 VYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKI 230 (286)
T ss_dssp EESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHH
T ss_pred ecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHH
Confidence 5544222222333 33333444333333 899999999999999998755 99999999999999999999999
Q ss_pred cCCCC-cccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 612 IDPGF-KWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 612 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
+|.+. .+.+++.........+|. +..||++|+++.++.. ++|+++|++++.++
T Consensus 231 ~~~~~~~i~~~~~~~~~~~~~rp~-~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 231 LGLDPELIKPVSSSEFPRAAPRPR-NTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp HTHCTTEEEEESSTTSTTSSGS-S-BE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred hCCCCceEEecccccCCCCCCCCC-cccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 99877 446666555444344443 8999999999986655 89999999988653
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=312.32 Aligned_cols=265 Identities=17% Similarity=0.231 Sum_probs=204.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------eccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPE 457 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 457 (676)
||||||||+||||++|+++|+++| +|. .+.+|++|.+.+.+++++.+||+|||||+.. .++.++.+++.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~---~~~~~~~~~~~ 76 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHT---AVDKAESEPEF 76 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccC---CcchhhcCHHH
Confidence 589999999999999999999999 552 2357999999999999987789999999987 67777788888
Q ss_pred HHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEE
Q 005818 458 TIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537 (676)
Q Consensus 458 ~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~ 537 (676)
.+++|+.++.+|+++|++.++++||+||+.||++....| ..|+.+..|.+.||.||+.+|++++.+.. +
T Consensus 77 ~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p-------~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~----~ 145 (299)
T PRK09987 77 AQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIP-------WQETDATAPLNVYGETKLAGEKALQEHCA----K 145 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCC-------cCCCCCCCCCCHHHHHHHHHHHHHHHhCC----C
Confidence 899999999999999999999999999999997654444 45566778889999999999999987643 4
Q ss_pred eeecccCCCCChH--HH----HHHHHhcCceeccCC---C----ccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHH
Q 005818 538 VRMPISSDLNNPR--NF----ITKISRYNKVVNIPN---S----MTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNE 603 (676)
Q Consensus 538 ~~~~r~~~~~g~~--~~----~~~~~~~~~~~~~~~---~----~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e 603 (676)
.+++|++++|||+ .+ +..+.+++....+++ + +.+++|++.++..+++.+ ..|+||+++++.+|+.|
T Consensus 146 ~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e 225 (299)
T PRK09987 146 HLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTWHD 225 (299)
T ss_pred EEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccHHH
Confidence 5999999999985 33 333334444332222 2 234566777777766553 45899999999999999
Q ss_pred HHHHHHhhc---CCCC---cccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 604 ILEMYKAYI---DPGF---KWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 604 ~~~~i~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
+++.+.+.+ |.+. .+.+++...+.....+|. +..+|++|+++.++|. ++|+++|++++.++
T Consensus 226 ~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~-~~~ld~~k~~~~lg~~~~~~~~~l~~~~~~~ 293 (299)
T PRK09987 226 YAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPH-NSRLNTEKFQQNFALVLPDWQVGVKRMLTEL 293 (299)
T ss_pred HHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCC-cccCCHHHHHHHhCCCCccHHHHHHHHHHHH
Confidence 999998864 4333 133444333322222222 7889999998866665 79999999998765
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=309.95 Aligned_cols=290 Identities=22% Similarity=0.244 Sum_probs=215.5
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCCCCCCCCCeEEEEecCCCHHHH----HHHHcc---CC
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLV----HFILLT---EK 81 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~----~~~~~~---~~ 81 (676)
|||||||||||++|++.|+++ +++++++ ++...... ...+..+|+.|..+. .+++.. .+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTK-----------FVNLVDLDIADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchH-----------HHhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence 899999999999999999999 5544443 33211000 012234566554332 233311 27
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|+|||+|+..... ..+....++.|+.++.+|+++|++.+ + +|||+||.++||...... .+|+.+..|.++|+
T Consensus 69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y~ 141 (308)
T PRK11150 69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDF---IEEREYEKPLNVYG 141 (308)
T ss_pred ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCC---CccCCCCCCCCHHH
Confidence 99999999865432 22445678999999999999999987 5 799999999999764332 35667778889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC----hHHHHHHHHHCCCCceee-cCCCceEeeeeHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK----LIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~ai 236 (676)
.+|..+|++++.++.+++++++++|++++|||+..+.. +...+.+.+.++..+.++ ++++..++|+|++|+++++
T Consensus 142 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~ 221 (308)
T PRK11150 142 YSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVN 221 (308)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHH
Confidence 99999999999998888999999999999999864432 334455667777655554 5667789999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCC--CCcccccCHHHHHhCCCccc-CCHHHHH
Q 005818 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF--NDQRYFLDVQKLKQLGWYER-VTWEEGL 313 (676)
Q Consensus 237 ~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~lg~~~~-~~~~~~l 313 (676)
+.++++.. +++||+++++.+|+.|+++.+.+.++.. +......+.... .......|.+|++++||+|+ .+++++|
T Consensus 222 ~~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl 299 (308)
T PRK11150 222 LWFWENGV-SGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAEGV 299 (308)
T ss_pred HHHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHhcCCCCCCCCHHHHH
Confidence 99988754 5799999999999999999999999853 111111111110 11234689999999999997 4999999
Q ss_pred HHHHHHHh
Q 005818 314 QKTMKWYI 321 (676)
Q Consensus 314 ~~~~~~~~ 321 (676)
+++++|+.
T Consensus 300 ~~~~~~~~ 307 (308)
T PRK11150 300 AEYMAWLN 307 (308)
T ss_pred HHHHHHhh
Confidence 99999975
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=310.56 Aligned_cols=310 Identities=20% Similarity=0.253 Sum_probs=225.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
.+++++||||||+||||++|++.|+++ +++|+++.|...... ...+.......+++++.+|++|++.+.+++ .++
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~ 81 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI--AGC 81 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH--hcC
Confidence 466789999999999999999999999 567766666432110 000000011136889999999999999988 679
Q ss_pred CEEEEccccCCcCCcCCChH-HHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC-cCCCCCCC---------
Q 005818 83 DTIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED-AVVGNHEA--------- 151 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~-~~~~~~e~--------- 151 (676)
|+|||+|+.... ...++. .++++|+.++.+|++++++.+.+++|||+||.++|+..... .....+|+
T Consensus 82 d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~ 159 (338)
T PLN00198 82 DLVFHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLT 159 (338)
T ss_pred CEEEEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhh
Confidence 999999996432 222333 56799999999999999886447899999999999854210 00011121
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeec-CCCc----eE
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHG-DGSN----VR 224 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 224 (676)
.+..|.++|+.+|..+|.+++.|+++++++++++||++||||+... ..++. ++..+..++.+.+.+ ++.+ .+
T Consensus 160 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 238 (338)
T PLN00198 160 SEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSI 238 (338)
T ss_pred hcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCc
Confidence 1234778899999999999999999889999999999999998532 12332 334455666555544 2222 37
Q ss_pred eeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCc
Q 005818 225 SYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~ 304 (676)
+|+||+|++++++.+++.+..++.| ++++...++.|+++.+.+.++... ....+. ..+ ......+|.+|++++||+
T Consensus 239 ~~i~V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~k~~~~G~~ 314 (338)
T PLN00198 239 SITHVEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQ-VPTDFG-DFP-SKAKLIISSEKLISEGFS 314 (338)
T ss_pred ceeEHHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCC-CCcccc-ccC-CCCccccChHHHHhCCce
Confidence 9999999999999999876555678 455677999999999998876311 111111 111 123456899999889999
Q ss_pred ccCCHHHHHHHHHHHHhhCC
Q 005818 305 ERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 305 ~~~~~~~~l~~~~~~~~~~~ 324 (676)
|+++++++|+++++|++++.
T Consensus 315 p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 315 FEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred ecCcHHHHHHHHHHHHHHcC
Confidence 99999999999999999753
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=308.09 Aligned_cols=307 Identities=28% Similarity=0.444 Sum_probs=235.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|||||||||||++|++.|+++ +++|++++|....... ..+. .....++.++.+|+.|.+.+.+++...++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHH-HhcCCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence 47999999999999999999999 6788877654321110 0000 11123577889999999999998865689999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC-CCCChhHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL-LPTNPYSATK 164 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-~p~~~Y~~sK 164 (676)
||+|+.........++...++.|+.++.+|+++|++.+ +++||++||.++||.....+ .+|+++. .|.+.|+.+|
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~---~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIP---YVESFPTGTPQSPYGKSK 153 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCc---cccccCCCCCCChhHHHH
Confidence 99998765433445567889999999999999999987 88999999999998654333 2566665 6788999999
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEeeCCccCCCC------C----CCChHHHHHHHHHCCC-Cceeec------CCCceEee
Q 005818 165 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQ------F----PEKLIPKFILLAMKGK-PLPIHG------DGSNVRSY 226 (676)
Q Consensus 165 ~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~------~----~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~ 226 (676)
..+|++++.+++.+ +++++++|++.+||+.. . +.++++.+.+....+. .+.+++ ++.++++|
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence 99999999987654 89999999999999731 1 1234444444333322 344444 57788999
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg 302 (676)
+|++|++++++.+++.. ..+++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+......++|++|++ .+|
T Consensus 234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg 311 (338)
T PRK10675 234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_pred EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCC--eeeCCCCCCchhhhhcCHHHHHHHhC
Confidence 99999999999998752 23579999999999999999999999997543 3333433434455678999997 599
Q ss_pred CcccCCHHHHHHHHHHHHhhC
Q 005818 303 WYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~~~~ 323 (676)
|+|+++++++|+++++|+.++
T Consensus 312 ~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 312 WRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred CCCcCcHHHHHHHHHHHHHhh
Confidence 999999999999999999875
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=285.49 Aligned_cols=309 Identities=31% Similarity=0.485 Sum_probs=255.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCC-CCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLN-PSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
.++||||||+||||+|.+-+|+++ ++.|+++|+..+... ..+.. ......++.++++|+.|.+++++++...++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 578999999999999999999999 788888888654321 11111 1122568999999999999999999989999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCC-CCChhHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 162 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~-p~~~Y~~ 162 (676)
.|+|+|+......+.+++..+...|+.|+.+|++.+++++ ++.+|+.||+.|||.+..-+ +.|..+.. |.++|+.
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip---~te~~~t~~p~~pyg~ 155 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVP---ITEEDPTDQPTNPYGK 155 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceee---ccCcCCCCCCCCcchh
Confidence 9999999999989999999999999999999999999998 99999999999999988744 47777777 9999999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccC--CC----CC----CCChHHHHHHHHHC--------CCCceeecCCCceE
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYG--PN----QF----PEKLIPKFILLAMK--------GKPLPIHGDGSNVR 224 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G--~~----~~----~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 224 (676)
+|.++|+++..+.+.+++.++.||.++++| |. +. +.++.+.....+.. |..... .+|...|
T Consensus 156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vr 234 (343)
T KOG1371|consen 156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVR 234 (343)
T ss_pred hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeee
Confidence 999999999999999999999999999999 32 22 23444433333332 222222 2458899
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-h
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-Q 300 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~ 300 (676)
+++|+-|.|+.+..++++.. .-++||++.+...++.+|..++++..|.+.+. ...+.++.+...+..+.+++. +
T Consensus 235 dyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~--~~v~~R~gdv~~~ya~~~~a~~e 312 (343)
T KOG1371|consen 235 DYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK--KVVPRRNGDVAFVYANPSKAQRE 312 (343)
T ss_pred cceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc--cccCCCCCCceeeeeChHHHHHH
Confidence 99999999999999998643 23589999999999999999999999998764 334447777777778888875 7
Q ss_pred CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 301 LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 301 lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|||+|.++++++++++++|..+++
T Consensus 313 lgwk~~~~iee~c~dlw~W~~~np 336 (343)
T KOG1371|consen 313 LGWKAKYGLQEMLKDLWRWQKQNP 336 (343)
T ss_pred hCCccccCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999876
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=305.64 Aligned_cols=304 Identities=18% Similarity=0.218 Sum_probs=224.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.++|||||||||||++|++.|+++ +++|++++|...... ...+.. .....+++++++|+.|++.+..++ .++|+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 79 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV--DGCEG 79 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--cCCCE
Confidence 578999999999999999999999 567777776532111 111100 111347899999999999999998 68999
Q ss_pred EEEccccCCcCCcCCChH-HHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc--ccCCCCCCcCCCCCCCCCCCC-----
Q 005818 85 IMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE--VYGETDEDAVVGNHEASQLLP----- 156 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~--vyg~~~~~~~~~~~e~~~~~p----- 156 (676)
|||+|+.... ...++. ..+++|+.++.+++++|++...+++|||+||.+ +|++.........+|+.+..|
T Consensus 80 Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~ 157 (322)
T PLN02662 80 VFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE 157 (322)
T ss_pred EEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhc
Confidence 9999997542 223443 688999999999999998872389999999976 465432111112345544444
Q ss_pred -CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 157 -TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 157 -~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
.++|+.+|..+|++++.|.++++++++++||+++|||+..+. .....++..+..+... . +.+.++|+|++|+|+
T Consensus 158 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~i~v~Dva~ 233 (322)
T PLN02662 158 SKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-F---PNASYRWVDVRDVAN 233 (322)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-C---CCCCcCeEEHHHHHH
Confidence 257999999999999999888899999999999999986442 3444555555555432 1 346789999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQ 314 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~ 314 (676)
+++.+++++..++.||++ +..+++.|+++.+.+.++... ......+..+ ....+.+|.+|+++|||++ .+++++|+
T Consensus 234 a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~-~~~~~~~d~~k~~~lg~~~-~~~~~~l~ 309 (322)
T PLN02662 234 AHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQ-LPEKCADDKP-YVPTYQVSKEKAKSLGIEF-IPLEVSLK 309 (322)
T ss_pred HHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCC-CCCCCCCccc-cccccccChHHHHHhCCcc-ccHHHHHH
Confidence 999999876656689997 578999999999999876421 1111111111 2344679999999999997 59999999
Q ss_pred HHHHHHhhCC
Q 005818 315 KTMKWYISNP 324 (676)
Q Consensus 315 ~~~~~~~~~~ 324 (676)
++++||+++.
T Consensus 310 ~~~~~~~~~~ 319 (322)
T PLN02662 310 DTVESLKEKG 319 (322)
T ss_pred HHHHHHHHcC
Confidence 9999998764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=308.66 Aligned_cols=306 Identities=17% Similarity=0.220 Sum_probs=219.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCC-CCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLN-PSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+.++|||||||||||++|++.|+++ +++|++++|...... ...+. ......+++++.+|+.|.+.+.+++ .++|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~d 79 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI--RGCT 79 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--hCCC
Confidence 3579999999999999999999999 678877776532111 00000 0011235889999999999999988 6899
Q ss_pred EEEEccccCCcCCcCCCh-HHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC---------C
Q 005818 84 TIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS---------Q 153 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~---------~ 153 (676)
+|||+|+..... ..++ ...+++|+.++.+|+++|++.+.+++|||+||.++|+........ ..|+. +
T Consensus 80 ~ViH~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~-~~E~~~~~~~~~~~~ 156 (351)
T PLN02650 80 GVFHVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPV-YDEDCWSDLDFCRRK 156 (351)
T ss_pred EEEEeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCc-cCcccCCchhhhhcc
Confidence 999999875422 2233 468899999999999999987657899999999887654321110 12221 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHH--HHCCCCceeecCCCceEeeeeHHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL--AMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
..|.++|+.+|..+|.+++.|++++|++++++||+++|||+.... ....++.. ...+.... .+. .+.++|+|++|
T Consensus 157 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~D 233 (351)
T PLN02650 157 KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS-MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDD 233 (351)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC-CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHH
Confidence 234568999999999999999999999999999999999986432 11122221 12233221 222 23479999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHH
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEE 311 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~ 311 (676)
++++++.+++++..++.| ++++..+|+.|+++.+.+.++... .... .+..+.....+..|.+++++|||+|++++++
T Consensus 234 va~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~-~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e 310 (351)
T PLN02650 234 LCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYN-IPAR-FPGIDEDLKSVEFSSKKLTDLGFTFKYSLED 310 (351)
T ss_pred HHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccC-CCCC-CCCcCcccccccCChHHHHHhCCCCCCCHHH
Confidence 999999999876656688 566788999999999999876321 1111 1112223344567889988899999999999
Q ss_pred HHHHHHHHHhhCC
Q 005818 312 GLQKTMKWYISNP 324 (676)
Q Consensus 312 ~l~~~~~~~~~~~ 324 (676)
+|+++++|+++..
T Consensus 311 gl~~~i~~~~~~~ 323 (351)
T PLN02650 311 MFDGAIETCREKG 323 (351)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999998754
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=300.74 Aligned_cols=299 Identities=35% Similarity=0.584 Sum_probs=244.5
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC-CEEEE
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI-DTIMH 87 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~-d~Vih 87 (676)
+|||||||||||++|+++|+++ +++|++++|........ ..+++++.+|++|.+.+.++. ..+ |+|||
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~--~~~~d~vih 70 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPL-------LSGVEFVVLDLTDRDLVDELA--KGVPDAVIH 70 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCcccccc-------ccccceeeecccchHHHHHHH--hcCCCEEEE
Confidence 4999999999999999999999 78888888864322110 157889999999998888777 444 99999
Q ss_pred ccccCCcCCcCC-ChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC-CCCCCCChhHHHHH
Q 005818 88 FAAQTHVDNSFG-NSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA-SQLLPTNPYSATKA 165 (676)
Q Consensus 88 ~a~~~~~~~~~~-~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-~~~~p~~~Y~~sK~ 165 (676)
+|+......... ++..+...|+.++.+++++|++.+ +++|||.||.++|+..... ...+|+ .+..|.++|+.+|.
T Consensus 71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~--~~~~E~~~~~~p~~~Yg~sK~ 147 (314)
T COG0451 71 LAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPP--LPIDEDLGPPRPLNPYGVSKL 147 (314)
T ss_pred ccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCC--CCcccccCCCCCCCHHHHHHH
Confidence 999987544333 456789999999999999999965 9999999998888876222 133555 67788889999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
.+|+.++.+.+.++++++++||++||||+..+. .++..++..+..+.+ +...+++...++++|++|++++++.+++
T Consensus 148 ~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 227 (314)
T COG0451 148 AAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALE 227 (314)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHh
Confidence 999999999887899999999999999998665 566666666777776 6666778888999999999999999999
Q ss_pred cCCCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHH-hCCCcccCCHHHHHHHHH
Q 005818 242 KGEVGHVYNIGTKK-ERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTM 317 (676)
Q Consensus 242 ~~~~~~~y~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~~ 317 (676)
++..+ .||++++. ..++.|+++.+.+.+|...+. +...+ ..........+|..+++ .|||.|+.++++++.+++
T Consensus 228 ~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~ 305 (314)
T COG0451 228 NPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPL-IVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTL 305 (314)
T ss_pred CCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcc-eeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 88766 99999997 899999999999999987653 22222 23334456678999987 699999999999999999
Q ss_pred HHHhhC
Q 005818 318 KWYISN 323 (676)
Q Consensus 318 ~~~~~~ 323 (676)
.|+...
T Consensus 306 ~~~~~~ 311 (314)
T COG0451 306 EWLLKK 311 (314)
T ss_pred HHHHHh
Confidence 998864
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=302.75 Aligned_cols=301 Identities=21% Similarity=0.210 Sum_probs=222.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.++|||||||||||+++++.|+++ +++|+++.|...... ...+.. .....+++++.+|++|++.+.+++ .++|+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 80 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI--EGCDA 80 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH--hCCCE
Confidence 579999999999999999999999 577777666542211 111111 111346899999999999999998 67999
Q ss_pred EEEccccCCcCCcCCCh-HHHHHHHHHHHHHHHHHHHHcCCCceEEEEeccccc--CCCCCCcCCCCCCCCCCC------
Q 005818 85 IMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVY--GETDEDAVVGNHEASQLL------ 155 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vy--g~~~~~~~~~~~e~~~~~------ 155 (676)
|||+|+..... ..++ ...+++|+.|+.+++++|++...++||||+||.++| +..........+|+.+..
T Consensus 81 vih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~ 158 (322)
T PLN02986 81 VFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRE 158 (322)
T ss_pred EEEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhc
Confidence 99999975432 2233 357899999999999999985338999999998764 332211111124443322
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
+.++|+.+|..+|.++++|.++++++++++||+++|||+..+. ++...++.....+..+ + +.+.++|+|++|+|+
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~ 234 (322)
T PLN02986 159 TKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVAL 234 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHH
Confidence 4578999999999999999998899999999999999986432 3334555555666543 2 245679999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCC--cccccCHHHHHhCCCcccCCHHHH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND--QRYFLDVQKLKQLGWYERVTWEEG 312 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~k~~~lg~~~~~~~~~~ 312 (676)
+++.+++++..++.||++ ++.+|+.|+++.+.+.++.. .+... ..+... ..+.+|.+|+++|||+|+ +++++
T Consensus 235 a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~---~~~~~-~~~~~~~~~~~~~d~~~~~~lg~~~~-~l~e~ 308 (322)
T PLN02986 235 AHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPDL---CIADT-NEESEMNEMICKVCVEKVKNLGVEFT-PMKSS 308 (322)
T ss_pred HHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC---CCCCC-CccccccccCCccCHHHHHHcCCccc-CHHHH
Confidence 999999987666799995 56899999999999998631 11111 111111 223489999999999997 99999
Q ss_pred HHHHHHHHhhC
Q 005818 313 LQKTMKWYISN 323 (676)
Q Consensus 313 l~~~~~~~~~~ 323 (676)
|+++++|+.+.
T Consensus 309 ~~~~~~~~~~~ 319 (322)
T PLN02986 309 LRDTILSLKEK 319 (322)
T ss_pred HHHHHHHHHHc
Confidence 99999999874
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=311.94 Aligned_cols=273 Identities=15% Similarity=0.114 Sum_probs=208.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~ 433 (676)
.+|+|+|||||||||++|+++|+++|++| .++.+|++|.+.+.++++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~-- 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV-- 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC--
Confidence 35799999999999999999999999765 23568999999999999875
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
|+|||+|+.. ....+..++..++++|+.||.+|+++|++.++ ++||.||+.||+.....+ ..|+.+..|
T Consensus 92 d~ViHlAa~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~-------~~e~~~~~p 161 (348)
T PRK15181 92 DYVLHQAALG---SVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLP-------KIEERIGRP 161 (348)
T ss_pred CEEEECcccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCC-------CCCCCCCCC
Confidence 9999999976 44555677888899999999999999999997 688888889997543333 334456678
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCC-----CccchhhH
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTILDEL 575 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~v~D~ 575 (676)
.+.|+.||.++|++++.+.+..+++++++|++++|||+ .++.+++.+++....++ +|+||+|+
T Consensus 162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~ 241 (348)
T PRK15181 162 LSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV 241 (348)
T ss_pred CChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence 88999999999999998876789999999999999984 23556666665443332 99999999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL 651 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~ 651 (676)
|++++.++... .+++||+++++++|+.|+++.+.+.++.........................+|++|+++.++|.
T Consensus 242 a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~ 321 (348)
T PRK15181 242 IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYE 321 (348)
T ss_pred HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCC
Confidence 99998877542 34799999999999999999999988732110000000000101111124568999998865554
Q ss_pred --CCHHHHHHHhhhccCC
Q 005818 652 --LSIKESLIKNVFEPNK 667 (676)
Q Consensus 652 --~~~~~~l~~~~~~~~~ 667 (676)
.+++++|++++..+..
T Consensus 322 P~~sl~egl~~~~~w~~~ 339 (348)
T PRK15181 322 PEFDIKEGLKQTLKWYID 339 (348)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 4899999999876544
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=301.45 Aligned_cols=310 Identities=17% Similarity=0.222 Sum_probs=220.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+.|+||||||+||||+++++.|+++ +++|++++|....... .........+++++.+|+.|.+.+.+++ .++|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLH-LLSKWKEGDRLRLFRADLQEEGSFDEAV--KGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHH-HHHhhccCCeEEEEECCCCCHHHHHHHH--cCCCEE
Confidence 4579999999999999999999999 6788887775421110 0000011346889999999999999988 579999
Q ss_pred EEccccCCcCC--cCCChHH-----HHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC--cCCCCCCCC--C-
Q 005818 86 MHFAAQTHVDN--SFGNSFE-----FTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED--AVVGNHEAS--Q- 153 (676)
Q Consensus 86 ih~a~~~~~~~--~~~~~~~-----~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~e~~--~- 153 (676)
||+|+...... ...++.. .+++|+.++.+|+++|++.+.+++||++||.++||..... +....+|+. +
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~ 163 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI 163 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence 99999865432 2233433 4455679999999999886547899999999999854311 111123331 1
Q ss_pred ------CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCc--eeecC---C
Q 005818 154 ------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPL--PIHGD---G 220 (676)
Q Consensus 154 ------~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~--~~~~~---~ 220 (676)
..|.++|+.+|..+|++++.|++.++++++++||++||||+.... .++..+... ..+... ...+. .
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~ 242 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNSR 242 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCccccccccccccc
Confidence 124458999999999999999998999999999999999986422 222222221 233321 11111 1
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 300 (676)
...++|+|++|++++++.+++.+..++.|++ ++.++++.|+++.+.+.++... ..+...+.... .....+|.+++++
T Consensus 243 ~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 319 (353)
T PLN02896 243 MGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSN-IQVRLDEEKRG-SIPSEISSKKLRD 319 (353)
T ss_pred cCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCC-ccccccccccC-ccccccCHHHHHH
Confidence 1246999999999999999987655567865 5678999999999999887321 11222222111 1234568889889
Q ss_pred CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 301 LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 301 lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|||+|+++++++|+++++|++++.
T Consensus 320 lGw~p~~~l~~~i~~~~~~~~~~~ 343 (353)
T PLN02896 320 LGFEYKYGIEEIIDQTIDCCVDHG 343 (353)
T ss_pred cCCCccCCHHHHHHHHHHHHHHCC
Confidence 999999999999999999999865
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=295.89 Aligned_cols=295 Identities=24% Similarity=0.315 Sum_probs=226.2
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--CCCCEEEE
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--EKIDTIMH 87 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~~d~Vih 87 (676)
|||||||||||+++++.|.++|+ .+|++++|......... .....+.+|+.+.+.++.+... .++|+|||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLN-------LADLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhh-------hhheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 69999999999999999999952 26777776532111100 0123567888888887766531 58999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC-CCCCCChhHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS-QLLPTNPYSATKAG 166 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~-~~~p~~~Y~~sK~~ 166 (676)
+|+.... ...++...++.|+.++.+|+++|++.+ + +|||+||.++|+...... .|++ +..|.+.|+.+|..
T Consensus 73 ~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~----~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 73 QGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGF----REGRELERPLNVYGYSKFL 144 (314)
T ss_pred CccccCc--cccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCc----ccccCcCCCCCHHHHHHHH
Confidence 9997543 345677888999999999999999977 4 899999999999764322 2333 34588899999999
Q ss_pred HHHHHHHHHHH--cCCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceee------cCCCceEeeeeHHHHHH
Q 005818 167 AEMLVMAYGRS--YGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIH------GDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 167 ~E~~~~~~~~~--~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~v~D~a~ 234 (676)
+|.+++++..+ .+++++++|++.+|||+... ..++..++..+..+..+.++ ++|.+.++|+|++|+++
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~ 224 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVD 224 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHH
Confidence 99999886432 36799999999999998632 24566777777888777664 45778899999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC--CCCcccccCHHHHHh-CCCcccCCHHH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP--FNDQRYFLDVQKLKQ-LGWYERVTWEE 311 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~-lg~~~~~~~~~ 311 (676)
++..++++ ..+++||+++++++|+.|+++.+.+.+|.+........+..+ .......+|.+|+++ +||+|++++++
T Consensus 225 ~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~ 303 (314)
T TIGR02197 225 VNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEE 303 (314)
T ss_pred HHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHH
Confidence 99999987 456799999999999999999999999976532222122221 112235689999985 89999999999
Q ss_pred HHHHHHHHHh
Q 005818 312 GLQKTMKWYI 321 (676)
Q Consensus 312 ~l~~~~~~~~ 321 (676)
+|+++++|+.
T Consensus 304 ~l~~~~~~~~ 313 (314)
T TIGR02197 304 GVKDYVQWLL 313 (314)
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=290.08 Aligned_cols=257 Identities=27% Similarity=0.399 Sum_probs=207.2
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEccc
Q 005818 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAA 90 (676)
Q Consensus 11 lVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 90 (676)
|||||+||||++|+++|+++|+.++|.++++......... .......+++++|++|++++.+++ .++|+|||+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~---~~~~~~~~~~~~Di~d~~~l~~a~--~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKD---LQKSGVKEYIQGDITDPESLEEAL--EGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchh---hhcccceeEEEeccccHHHHHHHh--cCCceEEEeCc
Confidence 7999999999999999999975578888887654322111 111223449999999999999999 89999999999
Q ss_pred cCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCC-CCcCCCCCCCCC--CCCCChhHHHHHHH
Q 005818 91 QTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETD-EDAVVGNHEASQ--LLPTNPYSATKAGA 167 (676)
Q Consensus 91 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~~~~~e~~~--~~p~~~Y~~sK~~~ 167 (676)
...... ......++++||.||+||+++|++.+ +++|||+||.++++++. +.+....+|+.+ ..+.+.|+.||+.+
T Consensus 76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A 153 (280)
T PF01073_consen 76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA 153 (280)
T ss_pred cccccC-cccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence 876532 34566799999999999999999987 99999999999998732 333333355544 33678999999999
Q ss_pred HHHHHHHHH---Hc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 168 EMLVMAYGR---SY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 168 E~~~~~~~~---~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
|+++++... +. .+.+++|||+.||||++ ..+.+.+...+..+......+++....+++||+|+|.|++.+++.
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d--~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGD--QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCccc--ccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHH
Confidence 999998665 22 49999999999999998 356667777777776677778888899999999999999887652
Q ss_pred ---C-----CCCceEEEcCCCccc-HHHHHHHHHHHhCCCCCc
Q 005818 243 ---G-----EVGHVYNIGTKKERR-VIDVATDICKLFSLNPDT 276 (676)
Q Consensus 243 ---~-----~~~~~y~i~~~~~~s-~~el~~~i~~~~g~~~~~ 276 (676)
+ ..|+.|+|++++++. +.|+...+.+.+|.+.+.
T Consensus 232 L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 232 LLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred hccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 2 368899999999999 999999999999997654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=271.85 Aligned_cols=273 Identities=26% Similarity=0.347 Sum_probs=234.8
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+|||||++|++|+.|++.|. . +++|+.+++.. .|++|++.+.+++.+.+||+|||+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~~PDvVIn~ 57 (281)
T COG1091 2 KILITGANGQLGTELRRALP-G--EFEVIATDRAE---------------------LDITDPDAVLEVIRETRPDVVINA 57 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-C--CceEEeccCcc---------------------ccccChHHHHHHHHhhCCCEEEEC
Confidence 49999999999999999998 3 78999988842 899999999999988899999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+....+.++.+++..+.+|..|+.|++++|++.| .++||+||..||++..+.+. .|++++.|.+.||+||+.+|
T Consensus 58 AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~~Y---~E~D~~~P~nvYG~sKl~GE 132 (281)
T COG1091 58 AAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGPY---KETDTPNPLNVYGRSKLAGE 132 (281)
T ss_pred ccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCCCC---CCCCCCCChhhhhHHHHHHH
Confidence 99999999999999999999999999999999998 89999999999999886544 78999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCce
Q 005818 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHV 248 (676)
Q Consensus 169 ~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~ 248 (676)
..++++. -..+|+|.+++||... .+|+..+++.+..++++.+..+ |..++++..|+|+++..+++....+++
T Consensus 133 ~~v~~~~----~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~~~~ 204 (281)
T COG1091 133 EAVRAAG----PRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKEGGV 204 (281)
T ss_pred HHHHHhC----CCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhccccCcE
Confidence 9998753 5579999999999876 6899999999999999988764 788999999999999999998877779
Q ss_pred EEEcCCCcccHHHHHHHHHHHhCCCCCcc-eeeec--CCCCCCc-ccccCHHHHHh-CCCcccCCHHHHHHHHHHH
Q 005818 249 YNIGTKKERRVIDVATDICKLFSLNPDTQ-IKFVE--NRPFNDQ-RYFLDVQKLKQ-LGWYERVTWEEGLQKTMKW 319 (676)
Q Consensus 249 y~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~--~~~~~~~-~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~ 319 (676)
||+++....||.|+++.|.+.++.+.... ..... +.+...+ .-.+++.|+.+ +|++++ +|+++++.+++.
T Consensus 205 yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 205 YHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred EEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 99999999999999999999998655221 11111 1222222 23589999986 677776 999999988764
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=313.95 Aligned_cols=269 Identities=21% Similarity=0.245 Sum_probs=206.4
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCceeeccccC------------------CChHHHHHHhhccCCCEEEECccc
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRL------------------ENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl------------------~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
+...|||+|||||||||++|+++|+++|++|..+.-+. .+.+.++..+.+ +|+|||||+.
T Consensus 117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~--~D~ViHlAa~ 194 (436)
T PLN02166 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLE--VDQIYHLACP 194 (436)
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccC--CCEEEECcee
Confidence 44458999999999999999999999999875432110 011112222333 5999999997
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCcccc----CCCCCCCCchhh
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEE----DKPNFTGSFYSK 518 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e----~~~~~p~~~Y~~ 518 (676)
. .+..+..++..++++|+.|+.+|+++|++.++++|++||+.||+.....| ..|+ ..|..|.+.|+.
T Consensus 195 ~---~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p------~~E~~~~~~~p~~p~s~Yg~ 265 (436)
T PLN02166 195 A---SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHP------QKETYWGNVNPIGERSCYDE 265 (436)
T ss_pred c---cchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCC------CCccccccCCCCCCCCchHH
Confidence 6 34445567888999999999999999999999999999999998654333 2222 246667789999
Q ss_pred hHHHHHHHHHHccCeEEEEeeecccCCCCChH----------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHH
Q 005818 519 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMA 583 (676)
Q Consensus 519 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 583 (676)
+|..+|++++.+.+..+++++++|++++|||+ .++.+++++++....++ +|+||+|++++++.++
T Consensus 266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~ 345 (436)
T PLN02166 266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM 345 (436)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence 99999999999877788999999999999985 35666777766544433 8999999999999999
Q ss_pred hcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHh
Q 005818 584 KRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKN 661 (676)
Q Consensus 584 ~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~ 661 (676)
+....|+||+++++.+|+.|+++.+++.+|.+..+...+.. ........+|++|++++++|. .+|+++|+++
T Consensus 346 ~~~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~------~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~ 419 (436)
T PLN02166 346 EGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT------ADDPHKRKPDISKAKELLNWEPKISLREGLPLM 419 (436)
T ss_pred hcCCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC------CCCccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 87777899999999999999999999999976544222211 011124467999999877766 4899999998
Q ss_pred hhccC
Q 005818 662 VFEPN 666 (676)
Q Consensus 662 ~~~~~ 666 (676)
+..+.
T Consensus 420 i~~~~ 424 (436)
T PLN02166 420 VSDFR 424 (436)
T ss_pred HHHHH
Confidence 76553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=290.95 Aligned_cols=306 Identities=32% Similarity=0.488 Sum_probs=235.9
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+||||||||+||+++++.|+++ +++|+++++....... .........+++++.+|+.+++.+.+++...++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPE-ALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchh-hhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999999999999999999 5677777654321111 111001112578899999999999999866689999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+.........++...+..|+.++.+++++|.+.+ +++||++||..+|+.....+ .+|+++..|.+.|+.+|..+|
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~---~~e~~~~~~~~~y~~sK~~~e 153 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIP---ISEDSPLGPINPYGRSKLMSE 153 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCC---ccccCCCCCCCchHHHHHHHH
Confidence 99865544455666788999999999999999877 78999999999998665433 366777778899999999999
Q ss_pred HHHHHHHHH-cCCCEEEEeeCCccCCCCC---------CCChHHHHHHHHH-CCCCceeec------CCCceEeeeeHHH
Q 005818 169 MLVMAYGRS-YGLPVITTRGNNVYGPNQF---------PEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYCED 231 (676)
Q Consensus 169 ~~~~~~~~~-~~l~~~ilR~~~i~G~~~~---------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~v~v~D 231 (676)
.+++.++++ .+++++++||+.+||+... ...+++.+..... ....+.+++ ++.+.++|+|++|
T Consensus 154 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 154 RILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 999998877 7999999999999998531 1235555555544 333344332 4667889999999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccC
Q 005818 232 VAEAFDTILHKG---EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERV 307 (676)
Q Consensus 232 ~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~ 307 (676)
++++++.+++.. ..+++||+++++++|+.|+++.+++.+|.+.. +...+..+.....+..+.+++++ |||+|.+
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~ 311 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFP--VELAPRRPGDPASLVADASKIRRELGWQPKY 311 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcc--eEeCCCCCccccchhcchHHHHHHhCCCCCc
Confidence 999999998752 34689999999999999999999999997653 22223332223345678999875 9999999
Q ss_pred C-HHHHHHHHHHHHhhC
Q 005818 308 T-WEEGLQKTMKWYISN 323 (676)
Q Consensus 308 ~-~~~~l~~~~~~~~~~ 323 (676)
+ ++++|+++++|+.++
T Consensus 312 ~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 312 TDLEIIIKTAWRWESRN 328 (328)
T ss_pred chHHHHHHHHHHHHhcC
Confidence 7 999999999998864
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=289.15 Aligned_cols=275 Identities=29% Similarity=0.414 Sum_probs=209.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
||||||||+|+||++|.+.|.++ +++|+..+|. ..|+.|.+.+.+.+...++|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 68999999999999999999998 7899998774 489999999999997778999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+...++.++.++....++|+.++.+|+++|+..+ .++||+||..||++..+.+. .|++++.|.+.||.+|+.+
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~y---~E~d~~~P~~~YG~~K~~~ 132 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGPY---TEDDPPNPLNVYGRSKLEG 132 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB----TTS----SSHHHHHHHHH
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCccccc---ccCCCCCCCCHHHHHHHHH
Confidence 999998888889999999999999999999999988 79999999999988865543 7888999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE--- 244 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~--- 244 (676)
|+.+++.. -.+.|+|++++||+.. .+++..+++.+.+++.+.+.. ++.+++++++|+|+++..++++..
T Consensus 133 E~~v~~~~----~~~~IlR~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~ 204 (286)
T PF04321_consen 133 EQAVRAAC----PNALILRTSWVYGPSG--RNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGA 204 (286)
T ss_dssp HHHHHHH-----SSEEEEEE-SEESSSS--SSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-G
T ss_pred HHHHHHhc----CCEEEEecceecccCC--CchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhccccc
Confidence 99998743 3689999999999943 589999999999999888865 478899999999999999998754
Q ss_pred -CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC-----CCCcccccCHHHHHh-CCCcccCCHHHHHHHHH
Q 005818 245 -VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP-----FNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317 (676)
Q Consensus 245 -~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~ 317 (676)
..++||+++++.+|+.|+++.+++.+|.+... +...+... .......+|++|++. +|.+++ +|+++|++++
T Consensus 205 ~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~-i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~ 282 (286)
T PF04321_consen 205 SPWGIYHLSGPERVSRYEFAEAIAKILGLDPEL-IKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELV 282 (286)
T ss_dssp GG-EEEE---BS-EEHHHHHHHHHHHHTHCTTE-EEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHH
T ss_pred ccceeEEEecCcccCHHHHHHHHHHHhCCCCce-EEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHH
Confidence 36899999999999999999999999987732 22221111 112356799999987 699886 8999999998
Q ss_pred HHH
Q 005818 318 KWY 320 (676)
Q Consensus 318 ~~~ 320 (676)
+.|
T Consensus 283 ~~~ 285 (286)
T PF04321_consen 283 KQY 285 (286)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=270.85 Aligned_cols=272 Identities=18% Similarity=0.188 Sum_probs=222.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--------------------------ceeeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI--------------------------PFEYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~--------------------------~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
++|+||||+||||++.+..+...-- +..++.+|+.+...+..++..-++|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 4799999999999999999887642 23889999999999988888878999999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
.|+.+ .++.+..++.+....|+.++.+|+++++..| + +++|+||+.|||+..... ...|...+.|.++|
T Consensus 87 faa~t---~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~------~~~E~s~~nPtnpy 157 (331)
T KOG0747|consen 87 FAAQT---HVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA------VVGEASLLNPTNPY 157 (331)
T ss_pred hHhhh---hhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc------cccccccCCCCCch
Confidence 99999 7999999999999999999999999999985 4 789999999998765433 12267788899999
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHH
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMA 583 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 583 (676)
+.||++||++++++.+.++++++++|..|||||+ .|+....++++....++ +|+||+|+++++..++
T Consensus 158 AasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~ 237 (331)
T KOG0747|consen 158 AASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL 237 (331)
T ss_pred HHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 35555556666554444 9999999999999999
Q ss_pred hcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCC----ccccChhHHHhhCCCC-CCHHHH
Q 005818 584 KRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRS----NNELDASKLKKEFPEL-LSIKES 657 (676)
Q Consensus 584 ~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~ld~~k~~~~~~~~-~~~~~~ 657 (676)
++.. +++||+++..+.+..|+++.+.+.+..... .++...+. .....|+ -..+|.+|++++||.+ .+|++|
T Consensus 238 ~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~--~~~~~p~~-~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eG 314 (331)
T KOG0747|consen 238 EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLP--NIDTEPFI-FFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEG 314 (331)
T ss_pred hcCCccceeeccCcchhhHHHHHHHHHHHHHHhcc--CCCCCCcc-eecCCCCcccccccccHHHHHhcCCcccCcHHHH
Confidence 9875 569999999999999999999998875322 11111000 0011111 2467999999888877 689999
Q ss_pred HHHhhhccCCC
Q 005818 658 LIKNVFEPNKK 668 (676)
Q Consensus 658 l~~~~~~~~~~ 668 (676)
|++++..+.+.
T Consensus 315 Lrktie~y~~~ 325 (331)
T KOG0747|consen 315 LRKTIEWYTKN 325 (331)
T ss_pred HHHHHHHHHhh
Confidence 99999877663
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=279.73 Aligned_cols=313 Identities=28% Similarity=0.348 Sum_probs=252.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++.++|||||+||||++|+++|++++...++.+.|..........-.......+++++.+|+.|...+..++ .++ .
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~--~~~-~ 78 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF--QGA-V 78 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--cCc-e
Confidence 4568999999999999999999999976789999988654221111111112567999999999999999998 788 8
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|+|+|+...++....++...+++||.||.|++++|++.+ ++++||+||+.|+.+.....+....++.|....++|+.||
T Consensus 79 Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sK 157 (361)
T KOG1430|consen 79 VVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESK 157 (361)
T ss_pred EEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHH
Confidence 888888877766666788999999999999999999998 9999999999998776654444444455655667999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh---
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH--- 241 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~--- 241 (676)
..+|+++++.....++..++|||..||||++ ..+++.++..+.+++.+...++++.+.+++++..++.+++.+..
T Consensus 158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd--~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~ 235 (361)
T KOG1430|consen 158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGD--KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALL 235 (361)
T ss_pred HHHHHHHHHhcCCCCeeEEEEccccccCCCC--ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHH
Confidence 9999999987655579999999999999999 57889999999999998888999899999999999999976653
Q ss_pred -c-C-CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceee-------------------ecCCCCC--------Cccc
Q 005818 242 -K-G-EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKF-------------------VENRPFN--------DQRY 291 (676)
Q Consensus 242 -~-~-~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-------------------~~~~~~~--------~~~~ 291 (676)
+ + ..|+.|+|.+++++...+++..+.+.+|...+..+.+ .|..|.. ....
T Consensus 236 ~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~ 315 (361)
T KOG1430|consen 236 DKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTR 315 (361)
T ss_pred hcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccc
Confidence 2 2 2688999999999888888889999999877632211 0011111 1133
Q ss_pred ccCHHHHH-hCCCcccCCHHHHHHHHHHHHhhC
Q 005818 292 FLDVQKLK-QLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 292 ~~~~~k~~-~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.++.+|++ +|||.|..++++++.+++.|....
T Consensus 316 ~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 316 TFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred ccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 57899997 599999999999999999988764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=300.69 Aligned_cols=272 Identities=22% Similarity=0.213 Sum_probs=208.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee------------------------------eccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE------------------------------YGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~------------------------------~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 4799999999999999999999997652 3458999999999999988889
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|||+|+.. ....+..++...+++|+.|+.+++++|++.++ ++|++||+.+|+.....| .+|+.+.
T Consensus 81 ~ViH~Aa~~---~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~ 150 (343)
T TIGR01472 81 EIYNLAAQS---HVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIP-------QNETTPF 150 (343)
T ss_pred EEEECCccc---ccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCC-------CCCCCCC
Confidence 999999976 33444556677789999999999999999874 678999999997644333 5566677
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCc-eeccC-----CCccchh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNK-VVNIP-----NSMTILD 573 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~-~~~~~-----~~~~~v~ 573 (676)
.|.+.|+.||..+|.+++.+.+.++++++..|+.++|||+ .++.++..++. ....+ .+|+||+
T Consensus 151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~ 230 (343)
T TIGR01472 151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK 230 (343)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence 8889999999999999999877778888889999999884 12333444443 22222 2999999
Q ss_pred hHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCccccc-------chH------hhhhHhccC--CCccc
Q 005818 574 ELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNF-------TLE------EQAKVIVAP--RSNNE 638 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-------~~~------~~~~~~~~~--~~~~~ 638 (676)
|+|++++.+++++..++||+++++++|+.|+++.+.+.+|.+..+... +.. ........+ .....
T Consensus 231 D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (343)
T TIGR01472 231 DYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLL 310 (343)
T ss_pred HHHHHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhc
Confidence 999999999987766899999999999999999999999965432110 000 000000011 11345
Q ss_pred cChhHHHhhCCCC--CCHHHHHHHhhhccC
Q 005818 639 LDASKLKKEFPEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 639 ld~~k~~~~~~~~--~~~~~~l~~~~~~~~ 666 (676)
+|++|+++.++|. .+++++|++++..+.
T Consensus 311 ~d~~k~~~~lgw~p~~~l~egi~~~~~~~~ 340 (343)
T TIGR01472 311 GDATKAKEKLGWKPEVSFEKLVKEMVEEDL 340 (343)
T ss_pred CCHHHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 6999998876766 489999999887654
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=282.64 Aligned_cols=274 Identities=23% Similarity=0.305 Sum_probs=220.9
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+|||||||||||+++++.|+++ +++|++++|. .+|+.|.+.+.+++...++|+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999999 6788888773 4799999999999966678999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+.........++...++.|+.++.+++++|++.+ .+||++||.++|+.....+ .+|+++..|.+.|+.+|..+|
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~---~~E~~~~~~~~~Y~~~K~~~E 132 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGKRP---YREDDATNPLNVYGQSKLAGE 132 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeecCCCCCC---CCCCCCCCCcchhhHHHHHHH
Confidence 99866544445567788999999999999999877 4899999999998754433 367777788899999999999
Q ss_pred HHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC-CCCc
Q 005818 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG-EVGH 247 (676)
Q Consensus 169 ~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~-~~~~ 247 (676)
++++.+ +++++++||+.+||++.. .+++..++..+..+.++.+.++ ++++++|++|+++++..+++++ ..++
T Consensus 133 ~~~~~~----~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~ 205 (287)
T TIGR01214 133 QAIRAA----GPNALIVRTSWLYGGGGG-RNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARG 205 (287)
T ss_pred HHHHHh----CCCeEEEEeeecccCCCC-CCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCC
Confidence 988764 689999999999999842 3566777777777777776654 5679999999999999999876 4678
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcc----eeee-----cCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHH
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQ----IKFV-----ENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTM 317 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~~----~~~~-----~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~ 317 (676)
+||+++++.+|+.|+++.+.+.+|...... +... +..........+|++|+++ ||| +..+++++|.+++
T Consensus 206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~ 284 (287)
T TIGR01214 206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWREALRAYL 284 (287)
T ss_pred eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHHHHHHHH
Confidence 999999999999999999999998754210 1100 0111112345789999986 899 5569999999886
Q ss_pred H
Q 005818 318 K 318 (676)
Q Consensus 318 ~ 318 (676)
+
T Consensus 285 ~ 285 (287)
T TIGR01214 285 Q 285 (287)
T ss_pred h
Confidence 5
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=307.93 Aligned_cols=268 Identities=20% Similarity=0.250 Sum_probs=204.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccC------------------CChHHHHHHhhccCCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRL------------------ENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl------------------~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
+.|||||||||||||++|+++|+++|++|..+.-+. .+.+.++.++.+ +|+|||||+..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~--~D~ViHlAa~~- 194 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLE--VDQIYHLACPA- 194 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcC--CCEEEEeeeec-
Confidence 447999999999999999999999999875432110 011112233444 59999999976
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCcccc----CCCCCCCCchhhhH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEE----DKPNFTGSFYSKTK 520 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e----~~~~~p~~~Y~~sK 520 (676)
.+..+..++...+++|+.++.+|+++|++.++++|++||+.||+.....| ..|+ ..|..+.+.|+.+|
T Consensus 195 --~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p------~~E~~~~~~~P~~~~s~Y~~SK 266 (442)
T PLN02206 195 --SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHP------QVETYWGNVNPIGVRSCYDEGK 266 (442)
T ss_pred --chhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCC------CCccccccCCCCCccchHHHHH
Confidence 34444567888999999999999999999999999999999997654433 2222 23555678899999
Q ss_pred HHHHHHHHHccCeEEEEeeecccCCCCChH----------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhc
Q 005818 521 AMVEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKR 585 (676)
Q Consensus 521 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~ 585 (676)
.++|+++..+.+..+++++++|++++|||. .++.+++.++++...++ +|+||+|+|++++.++++
T Consensus 267 ~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 267 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc
Confidence 999999998877789999999999999984 35566666666543332 799999999999999987
Q ss_pred CCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhh
Q 005818 586 NLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVF 663 (676)
Q Consensus 586 ~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~ 663 (676)
...|+||+++++.+|+.|+++.+++.+|.+..+...+... .......+|++|++++++|. .+|+++|++++.
T Consensus 347 ~~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~------~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~ 420 (442)
T PLN02206 347 EHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTE------DDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVK 420 (442)
T ss_pred CCCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCC------CCccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 7778999999999999999999999998765443222111 01113468999998877776 389999999887
Q ss_pred ccCC
Q 005818 664 EPNK 667 (676)
Q Consensus 664 ~~~~ 667 (676)
.+.+
T Consensus 421 ~~~~ 424 (442)
T PLN02206 421 DFRQ 424 (442)
T ss_pred HHHH
Confidence 5543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=298.32 Aligned_cols=278 Identities=14% Similarity=0.099 Sum_probs=205.8
Q ss_pred CCCCccEEEEEcCCcchhHHHHHHHHHcCCcee-----------------------------------------eccccC
Q 005818 380 RQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFE-----------------------------------------YGKGRL 418 (676)
Q Consensus 380 ~~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-----------------------------------------~~~~Dl 418 (676)
...++|+||||||+||||++|+++|+++|++|. ++.+|+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 345668999999999999999999999997553 345899
Q ss_pred CChHHHHHHhhccCCCEEEECccccCCCCcchhccch---hhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCC
Q 005818 419 ENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHK---PETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDA 493 (676)
Q Consensus 419 ~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~---~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~ 493 (676)
+|.+.+.+++++.++|+|||+|+.. ....+..++ +..+++|+.|+.+++++|++.++ ++|++||+.+||...
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~---~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~ 199 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQR---SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN 199 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcc---cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence 9999999999987789999999865 333333333 45578999999999999999885 588899999997532
Q ss_pred CCCCCCCCCcc------ccC--CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------------
Q 005818 494 KHPEGTGIGFK------EED--KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------------- 551 (676)
Q Consensus 494 ~~~~~~~~~~~------~e~--~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------------- 551 (676)
.|..+. .+. +++ .+..|.++|+.||.++|.+++.+.+.++++++++|++++|||+.
T Consensus 200 -~~~~E~-~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~ 277 (442)
T PLN02572 200 -IDIEEG-YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLD 277 (442)
T ss_pred -CCCccc-ccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccC
Confidence 110000 010 121 25667789999999999999998888899999999999999951
Q ss_pred -----------HHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcC-CC---ceeEccCCCcccHHHHHHHHHhh
Q 005818 552 -----------FITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRN-LS---GIWNFTNPGVVSHNEILEMYKAY 611 (676)
Q Consensus 552 -----------~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~-~~---g~yn~~~~~~~s~~e~~~~i~~~ 611 (676)
++.+++.+++....++ +|+||+|+|++++.++++. .. .+||+++ +.+|+.|+++.+++.
T Consensus 278 ~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~ 356 (442)
T PLN02572 278 YDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKA 356 (442)
T ss_pred cccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHH
Confidence 2344445554333322 9999999999999999864 23 3899987 689999999999999
Q ss_pred ---cCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-C---CHHHHHHHhhhccCC
Q 005818 612 ---IDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-L---SIKESLIKNVFEPNK 667 (676)
Q Consensus 612 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~---~~~~~l~~~~~~~~~ 667 (676)
+|.+..+...+... .........+|++|+++++|.+ . ++.++|.+++.++++
T Consensus 357 ~~~~g~~~~~~~~p~~~----~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~ 415 (442)
T PLN02572 357 GEKLGLDVEVISVPNPR----VEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKD 415 (442)
T ss_pred HHhhCCCCCeeeCCCCc----ccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 88665443222111 0111124457999998866655 3 788999999877653
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=297.26 Aligned_cols=283 Identities=16% Similarity=0.175 Sum_probs=202.9
Q ss_pred CCCCCCccEEEEEcCCcchhHHHHHHHHHc-CCce-------------------------eeccccCCChHHHHHHhhcc
Q 005818 378 SSRQKPFLKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------------EYGKGRLENRSQLLADIQNV 431 (676)
Q Consensus 378 ~~~~~~~~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~ 431 (676)
+++..+.|||||||||||||++|++.|+++ |++| +++.+|++|.+.+.++++++
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 344455689999999999999999999998 4644 34568999999999999886
Q ss_pred CCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCcc-------
Q 005818 432 KPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFK------- 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~------- 504 (676)
|+|||||+.. .+.....++...+..|+.++.+++++|++.+.++|++||+.+|+.....+..+..+..
T Consensus 88 --d~ViHlAa~~---~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~ 162 (386)
T PLN02427 88 --DLTINLAAIC---TPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYV 162 (386)
T ss_pred --CEEEEccccc---ChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccc
Confidence 9999999975 3333345666777899999999999999888788999999999753211100011110
Q ss_pred -ccC-CC------CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH-------------------HHHHHH
Q 005818 505 -EED-KP------NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------------------FITKIS 557 (676)
Q Consensus 505 -~e~-~~------~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------------------~~~~~~ 557 (676)
.|+ .+ ..|.+.|+.||.++|++++.+.+..+++++++|++++|||.. ++..++
T Consensus 163 ~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (386)
T PLN02427 163 LKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242 (386)
T ss_pred ccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh
Confidence 111 11 124568999999999999988777899999999999999851 223444
Q ss_pred hcCceeccCC-----CccchhhHHHHHHHHHhcCC---CceeEccCC-CcccHHHHHHHHHhhcCCCCcc-------ccc
Q 005818 558 RYNKVVNIPN-----SMTILDELLPISVEMAKRNL---SGIWNFTNP-GVVSHNEILEMYKAYIDPGFKW-------TNF 621 (676)
Q Consensus 558 ~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~---~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~-------~~~ 621 (676)
.+++....++ +|+||+|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|..... ..+
T Consensus 243 ~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~ 322 (386)
T PLN02427 243 RREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDV 322 (386)
T ss_pred cCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccccccccccc
Confidence 5555433322 89999999999999998752 359999998 5999999999999998842110 111
Q ss_pred chHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhcc
Q 005818 622 TLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEP 665 (676)
Q Consensus 622 ~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~ 665 (676)
+...+............+|++|++++++|. .+++++|++++..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~ 368 (386)
T PLN02427 323 SSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQ 368 (386)
T ss_pred CcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHH
Confidence 111100000011124467999998876665 58999999987653
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=292.19 Aligned_cols=272 Identities=14% Similarity=0.157 Sum_probs=203.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHc-CCce-------------------eeccccCC-ChHHHHHHhhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------EYGKGRLE-NRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~Dl~-d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
||+|+|||||||||++|+++|+++ |++| .++.+|+. +.+.+.++++++ |+|||+|+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--d~ViH~aa~ 78 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKC--DVILPLVAI 78 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCC--CEEEECccc
Confidence 578999999999999999999986 5644 56678997 677788888765 999999997
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCC------CCCCCch
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP------NFTGSFY 516 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~------~~p~~~Y 516 (676)
. .+.....++...+++|+.++++++++|++.+.++|+.||+.+|+..... ++.+|+.+ ..|.+.|
T Consensus 79 ~---~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~------~~~ee~~~~~~~~~~~p~~~Y 149 (347)
T PRK11908 79 A---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDE------EFDPEASPLVYGPINKPRWIY 149 (347)
T ss_pred C---ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCc------CcCccccccccCcCCCccchH
Confidence 6 3444567888889999999999999999988889999999999754322 23444432 2456789
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCceeccC-----CCccchhhH
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIP-----NSMTILDEL 575 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~-----~~~~~v~D~ 575 (676)
+.||..+|++++.+.+..+++++++|++++|||. .++.++..+++..... .+|+|++|+
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~ 229 (347)
T PRK11908 150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDG 229 (347)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHH
Confidence 9999999999998876789999999999999984 2344555565533222 289999999
Q ss_pred HHHHHHHHhcCC----CceeEccCC-CcccHHHHHHHHHhhcCCCCcc---------cccchHhhhhHhccCCCccccCh
Q 005818 576 LPISVEMAKRNL----SGIWNFTNP-GVVSHNEILEMYKAYIDPGFKW---------TNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 576 a~~~~~~~~~~~----~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
+++++.+++++. +++||++++ +.+|+.|+++.|.+.+|....+ ...+.................|+
T Consensus 230 a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 309 (347)
T PRK11908 230 IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKI 309 (347)
T ss_pred HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCCh
Confidence 999999998752 469999997 5899999999999999854322 11111110000000111344689
Q ss_pred hHHHhhCCCC--CCHHHHHHHhhhccC
Q 005818 642 SKLKKEFPEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 642 ~k~~~~~~~~--~~~~~~l~~~~~~~~ 666 (676)
+|+++.++|. .+++++|++++..+.
T Consensus 310 ~k~~~~lGw~p~~~l~~~l~~~~~~~~ 336 (347)
T PRK11908 310 DNTMQELGWAPKTTMDDALRRIFEAYR 336 (347)
T ss_pred HHHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence 9998777765 489999999887554
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=276.23 Aligned_cols=296 Identities=21% Similarity=0.311 Sum_probs=225.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||+||||+++++.|+++ +++|++++|..... .. ....+++++.+|+.|.+++.+++ .++|+|||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~----~~~~~~~~~~~D~~~~~~l~~~~--~~~d~vi~ 70 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDR--RN----LEGLDVEIVEGDLRDPASLRKAV--AGCRALFH 70 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccc--cc----cccCCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 47999999999999999999999 57888888864221 11 11236889999999999999988 68999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC---CChhHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP---TNPYSATK 164 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p---~~~Y~~sK 164 (676)
+|+... ....++...++.|+.++.++++++++.+ +++||++||..+|+..... ...+|+.+..| .+.|+.+|
T Consensus 71 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 71 VAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDG--TPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred eceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCC--CCcCccCCCCcccccChHHHHH
Confidence 998643 2334667889999999999999999877 8999999999999863221 12245555444 45899999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+|+++++++.+++++++++||+.+||++.........++.....+......+ ...+|+|++|++++++.+++++.
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~D~a~a~~~~~~~~~ 222 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVD---TGLNLVHVDDVAEGHLLALERGR 222 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeC---CCcceEEHHHHHHHHHHHHhCCC
Confidence 999999999988889999999999999998643333334444444443222222 23589999999999999998876
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-eee----------------ecCCCCC--------CcccccCHHHHH
Q 005818 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ-IKF----------------VENRPFN--------DQRYFLDVQKLK 299 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~----------------~~~~~~~--------~~~~~~~~~k~~ 299 (676)
.+..|+++ ++++++.|+++.+.+.+|.+.+.. +.. ....+.. ...+.+|++|++
T Consensus 223 ~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 301 (328)
T TIGR03466 223 IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAV 301 (328)
T ss_pred CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHH
Confidence 77788886 688999999999999999754321 110 0011110 124568999997
Q ss_pred h-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 300 Q-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 300 ~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
+ |||+|. +++++|.+++.||+++
T Consensus 302 ~~lg~~p~-~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 302 RELGYRQR-PAREALRDAVEWFRAN 325 (328)
T ss_pred HHcCCCCc-CHHHHHHHHHHHHHHh
Confidence 5 999996 9999999999999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=273.57 Aligned_cols=232 Identities=38% Similarity=0.663 Sum_probs=201.9
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEcc
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFA 89 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a 89 (676)
|||||||||||+++++.|+++ ++.|+.+.|.......... ..+++++.+|+.|.+.+.+++...++|+|||+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEK-----KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHH-----HTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccc-----cceEEEEEeeccccccccccccccCceEEEEee
Confidence 799999999999999999999 6777777776533221110 117899999999999999999777889999999
Q ss_pred ccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005818 90 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 169 (676)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 169 (676)
+.........+....++.|+.++.+++++|++.+ +++||++||..+|+.....+. +|+.+..|.++|+.+|...|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~---~e~~~~~~~~~Y~~~K~~~e~ 149 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPI---DEDSPINPLSPYGASKRAAEE 149 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSB---ETTSGCCHSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc---ccccccccccccccccccccc
Confidence 9865333345777899999999999999999988 799999999999999854443 677777899999999999999
Q ss_pred HHHHHHHHcCCCEEEEeeCCccCCC---CCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-C
Q 005818 170 LVMAYGRSYGLPVITTRGNNVYGPN---QFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-V 245 (676)
Q Consensus 170 ~~~~~~~~~~l~~~ilR~~~i~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~ 245 (676)
+++.+.++++++++++||+++|||+ .....+++.++..+..++++.++++++++++++|++|+|++++.+++++. .
T Consensus 150 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 229 (236)
T PF01370_consen 150 LLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAA 229 (236)
T ss_dssp HHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCC
Confidence 9999999889999999999999999 45568899999999999999999999999999999999999999999988 8
Q ss_pred CceEEEc
Q 005818 246 GHVYNIG 252 (676)
Q Consensus 246 ~~~y~i~ 252 (676)
+++|||+
T Consensus 230 ~~~yNig 236 (236)
T PF01370_consen 230 GGIYNIG 236 (236)
T ss_dssp TEEEEES
T ss_pred CCEEEeC
Confidence 8999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=280.13 Aligned_cols=277 Identities=25% Similarity=0.348 Sum_probs=217.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++|+||||||+||||+++++.|+++|..++|++++|..... ..+.......+++++.+|++|++.+.+++ .++|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~--~~iD~ 77 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ--WEMQQKFPAPCLRFFIGDVRDKERLTRAL--RGVDY 77 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH--HHHHHHhCCCcEEEEEccCCCHHHHHHHH--hcCCE
Confidence 457899999999999999999999986457888888754211 00101111246899999999999999998 67999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+.........++...+++|+.|+.+++++|+..+ +++||++||... ..|.++|+.+|
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~-----------------~~p~~~Y~~sK 139 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA-----------------ANPINLYGATK 139 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC-----------------CCCCCHHHHHH
Confidence 999999765444455677899999999999999999877 889999999532 23567899999
Q ss_pred HHHHHHHHHHH---HHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCC-CceeecCCCceEeeeeHHHHHHHHHHHH
Q 005818 165 AGAEMLVMAYG---RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 165 ~~~E~~~~~~~---~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~ai~~~~ 240 (676)
..+|.+++.++ ..+|++++++|||++|||+. .+++.+.+.+..+. .+++ +++.+.++|+|++|++++++.++
T Consensus 140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~---~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al 215 (324)
T TIGR03589 140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG---SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSL 215 (324)
T ss_pred HHHHHHHHHHHhhccccCcEEEEEeecceeCCCC---CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHH
Confidence 99999997754 35689999999999999975 57788887777775 4555 46788899999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCC-cccccCHHHHHh-CCCcccCCHHHHHH
Q 005818 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND-QRYFLDVQKLKQ-LGWYERVTWEEGLQ 314 (676)
Q Consensus 241 ~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~k~~~-lg~~~~~~~~~~l~ 314 (676)
++...+++| ++.+...++.|+++.+.+.++ +...+.++... .....|.+++++ |||.|++++++++.
T Consensus 216 ~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 216 ERMLGGEIF-VPKIPSMKITDLAEAMAPECP------HKIVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred hhCCCCCEE-ccCCCcEEHHHHHHHHHhhCC------eeEeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 875556778 566677999999999988642 22333444432 335679999974 99999999998875
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=279.20 Aligned_cols=264 Identities=20% Similarity=0.234 Sum_probs=205.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeec---cccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhh
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYG---KGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTN 462 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~---~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~N 462 (676)
||+|||||||||++|+++|+++|++|..+ .+|+.|.+.+.++++++++|+|||+|+.. ..+....++...+++|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~~~~n 77 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYT---DVDGAESDPEKAFAVN 77 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccc---cccccccCHHHHHHHH
Confidence 48999999999999999999999998543 46999999999999998899999999976 3444445667788999
Q ss_pred hhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecc
Q 005818 463 VVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 542 (676)
Q Consensus 463 v~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r 542 (676)
+.++.+++++|++.+.++|++||+++|+.....| .+|+.+..|.+.|+.+|..+|++++.+ +++++++|
T Consensus 78 ~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~-------~~E~~~~~~~~~Y~~~K~~~E~~~~~~----~~~~~ilR 146 (287)
T TIGR01214 78 ALAPQNLARAAARHGARLVHISTDYVFDGEGKRP-------YREDDATNPLNVYGQSKLAGEQAIRAA----GPNALIVR 146 (287)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCC-------CCCCCCCCCcchhhHHHHHHHHHHHHh----CCCeEEEE
Confidence 9999999999999888999999999997543333 445556677889999999999999865 46899999
Q ss_pred cCCCCChH---HH----HHHHHhcCceecc---CCCccchhhHHHHHHHHHhcC--CCceeEccCCCcccHHHHHHHHHh
Q 005818 543 SSDLNNPR---NF----ITKISRYNKVVNI---PNSMTILDELLPISVEMAKRN--LSGIWNFTNPGVVSHNEILEMYKA 610 (676)
Q Consensus 543 ~~~~~g~~---~~----~~~~~~~~~~~~~---~~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~~s~~e~~~~i~~ 610 (676)
++++|||. .+ +..+..+.+.... ..+++|++|+|+++..+++++ .+|+||+++++.+|+.|+++.+++
T Consensus 147 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~ 226 (287)
T TIGR01214 147 TSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFE 226 (287)
T ss_pred eeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHH
Confidence 99999985 33 3333333332222 238999999999999999875 468999999999999999999999
Q ss_pred hcCCCCccccc------chHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhc
Q 005818 611 YIDPGFKWTNF------TLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFE 664 (676)
Q Consensus 611 ~~g~~~~~~~~------~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~ 664 (676)
.+|.+....+. ...........+ .+..+|++|+++++++. ++|+++|++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 227 EAGADGLLLHPQEVKPISSKEYPRPARRP-AYSVLDNTKLVKTLGTPLPHWREALRAYLQE 286 (287)
T ss_pred HhCcccccccCceeEeecHHHcCCCCCCC-CccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence 99976432221 111111101111 25679999999987775 7999999988753
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=289.08 Aligned_cols=269 Identities=20% Similarity=0.162 Sum_probs=207.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee-----------------------------eccccCCChHHHHHHhhccCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE-----------------------------YGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
+|+||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++..+||
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 46899999999999999999999997652 3458999999999999987889
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC------cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL------LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~------~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+|+.. .+..+..++...+++|+.|+.+++++|++.++ ++|+.||+.+|+.... | .+|+.
T Consensus 86 ~Vih~A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~-------~~E~~ 154 (340)
T PLN02653 86 EVYNLAAQS---HVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-P-------QSETT 154 (340)
T ss_pred EEEECCccc---chhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-C-------CCCCC
Confidence 999999976 34444566777889999999999999998875 6788888899975432 3 56667
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---HH--------HHHHHhcCceecc-C-----CCccc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NF--------ITKISRYNKVVNI-P-----NSMTI 571 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~--------~~~~~~~~~~~~~-~-----~~~~~ 571 (676)
+..|.+.|+.||.++|++++.+.+.++++++..|+.++|||+ .+ +.++..+...... + .+|+|
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~ 234 (340)
T PLN02653 155 PFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGF 234 (340)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceeccee
Confidence 888889999999999999999877788888889999999884 11 2233344432222 2 29999
Q ss_pred hhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcc-cccchHhhhhHhccCCCccccChhHHHhhCCC
Q 005818 572 LDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKW-TNFTLEEQAKVIVAPRSNNELDASKLKKEFPE 650 (676)
Q Consensus 572 v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~ 650 (676)
++|+|++++.++++...+.||+++++++|+.|+++.+.+.+|.+... ..+...... ........+|++|+++.++|
T Consensus 235 v~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~~lgw 311 (340)
T PLN02653 235 AGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFR---PAEVDNLKGDASKAREVLGW 311 (340)
T ss_pred HHHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCC---ccccccccCCHHHHHHHhCC
Confidence 99999999999987766899999999999999999999999864111 111111000 11111446799999887666
Q ss_pred C--CCHHHHHHHhhhccC
Q 005818 651 L--LSIKESLIKNVFEPN 666 (676)
Q Consensus 651 ~--~~~~~~l~~~~~~~~ 666 (676)
. .+++++|++++....
T Consensus 312 ~p~~~l~~gi~~~~~~~~ 329 (340)
T PLN02653 312 KPKVGFEQLVKMMVDEDL 329 (340)
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 5 389999999987543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=289.76 Aligned_cols=276 Identities=18% Similarity=0.166 Sum_probs=208.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
||+|+|||||||||++|++.|+++|+++ .++.+|++|.+.+.+++++.++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4689999999999999999999999652 234689999999999998766799999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc---------CC-cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN---------GL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+||.. .......++..++++|+.|+.+++++|++. ++ ++|++||+.+|+..... .. ..+|+.
T Consensus 81 ~A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~----~~-~~~E~~ 152 (355)
T PRK10217 81 LAAES---HVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST----DD-FFTETT 152 (355)
T ss_pred CCccc---CcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC----CC-CcCCCC
Confidence 99976 344445667889999999999999999863 33 77888888999743210 11 255666
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCC-----CccchhhH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPN-----SMTILDEL 575 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~-----~~~~v~D~ 575 (676)
+..|.+.|+.||.++|.+++.+.+..+++++++|++++|||.. ++.++..+.+....++ +|+||+|+
T Consensus 153 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~ 232 (355)
T PRK10217 153 PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH 232 (355)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence 7778899999999999999998777899999999999999973 3455555554332222 89999999
Q ss_pred HHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchH------hhhhHhccCCCccccChhHHHhhC
Q 005818 576 LPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLE------EQAKVIVAPRSNNELDASKLKKEF 648 (676)
Q Consensus 576 a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~ld~~k~~~~~ 648 (676)
|++++.++++.. +++||+++++.+|+.|+++.+++.+|......+.+.. ..............+|++|+++.+
T Consensus 233 a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 312 (355)
T PRK10217 233 ARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAREL 312 (355)
T ss_pred HHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhc
Confidence 999999998764 4699999999999999999999998853322111100 000000111124578999997766
Q ss_pred CCC--CCHHHHHHHhhhccCC
Q 005818 649 PEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 649 ~~~--~~~~~~l~~~~~~~~~ 667 (676)
+|. .+++++|++++..+..
T Consensus 313 g~~p~~~l~e~l~~~~~~~~~ 333 (355)
T PRK10217 313 GWLPQETFESGMRKTVQWYLA 333 (355)
T ss_pred CCCCcCcHHHHHHHHHHHHHh
Confidence 665 4999999998865433
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=285.55 Aligned_cols=264 Identities=14% Similarity=0.163 Sum_probs=194.7
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCceee--------------ccccCCChHHHHHHhhc-------cCCCEEEECccccCC
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPFEY--------------GKGRLENRSQLLADIQN-------VKPTHVFNAAGVTGR 445 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v~~--------------~~~Dl~d~~~~~~~~~~-------~~~d~Vih~a~~~~~ 445 (676)
|+||||+||||++|+++|+++|+++.. ..+|+.|....+++++. .++|+|||+||...
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~- 80 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS- 80 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecC-
Confidence 899999999999999999999986422 22455544333322221 15799999999642
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
.. ..++...++.|+.++.+|+++|++.++++|+.||..+|+..... +.+|+.+..|.+.|+.||..+|+
T Consensus 81 --~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~-------~~~E~~~~~p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 81 --TT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDD-------FIEEREYEKPLNVYGYSKFLFDE 149 (308)
T ss_pred --Cc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCC-------CCccCCCCCCCCHHHHHHHHHHH
Confidence 11 23455678999999999999999999999999999999754322 25666677888999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChHH------------HHHHHHhcCceecc-C-----CCccchhhHHHHHHHHHhcCC
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNI-P-----NSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~-~-----~~~~~v~D~a~~~~~~~~~~~ 587 (676)
+++.+.+..+++++++|++++|||+. ++.++.++...... + .+|+||+|+|++++.++++..
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~ 229 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV 229 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence 99988666789999999999999851 22445555432222 1 289999999999999998877
Q ss_pred CceeEccCCCcccHHHHHHHHHhhcCCC-CcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 588 SGIWNFTNPGVVSHNEILEMYKAYIDPG-FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 588 ~g~yn~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
+|+||+++++++|+.|+++.+.+.+|.. ....+.+... . ........+|++|+++++|.+ ++|+++|++++..
T Consensus 230 ~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~ 305 (308)
T PRK11150 230 SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKL--K--GRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAW 305 (308)
T ss_pred CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCcccc--c--cccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 7899999999999999999999999842 1111111110 0 000113467999999886544 3899999999876
Q ss_pred cC
Q 005818 665 PN 666 (676)
Q Consensus 665 ~~ 666 (676)
+.
T Consensus 306 ~~ 307 (308)
T PRK11150 306 LN 307 (308)
T ss_pred hh
Confidence 54
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=282.32 Aligned_cols=282 Identities=21% Similarity=0.365 Sum_probs=217.6
Q ss_pred CCCeEEEE----cCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-------CCCCCCeEEEEecCCCHHHHH
Q 005818 6 TPKNILIT----GAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-------SRLSPNFKFIKGDVASADLVH 74 (676)
Q Consensus 6 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-------~~~~~~v~~v~~Dl~d~~~~~ 74 (676)
++++|||| |||||||++|++.|+++ +++|++++|...... .+.. .....+++++.+|+.| +.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~--~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~ 123 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQ--KMKKEPFSRFSELSSAGVKTVWGDPAD---VK 123 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchh--hhccCchhhhhHhhhcCceEEEecHHH---HH
Confidence 35789999 99999999999999999 688888888653211 1100 0112358999999987 44
Q ss_pred HHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 75 FILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 75 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++...++|+|||+++. +..++.+|+++|++.+ +++|||+||.++|+.....+. .|..+.
T Consensus 124 ~~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~---~E~~~~ 183 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPH---VEGDAV 183 (378)
T ss_pred hhhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCC---CCCCcC
Confidence 45544689999999752 1346889999999988 999999999999997654332 444444
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
.|.+ +|..+|.+++ +.+++++++||+++||++... .+...++..+..+.++.+++++.+.++|+|++|+++
T Consensus 184 ~p~~----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~-~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ 254 (378)
T PLN00016 184 KPKA----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNK-DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLAS 254 (378)
T ss_pred CCcc----hHHHHHHHHH----HcCCCeEEEeceeEECCCCCC-chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHH
Confidence 4433 8999998765 358999999999999997642 355667777888888888888999999999999999
Q ss_pred HHHHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC---------CCCCCcccccCHHHHHh-CCC
Q 005818 235 AFDTILHKGE-VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN---------RPFNDQRYFLDVQKLKQ-LGW 303 (676)
Q Consensus 235 ai~~~~~~~~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~k~~~-lg~ 303 (676)
++..+++++. .+++||+++++.+|+.|+++.+.+.+|.+... +.+.+. .+.....+..|.+|+++ |||
T Consensus 255 ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i-~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw 333 (378)
T PLN00016 255 MFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEI-VHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGW 333 (378)
T ss_pred HHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCce-eecCccccCccccccccccccccccCHHHHHHhcCC
Confidence 9999998753 57899999999999999999999999986532 111111 12222345579999985 999
Q ss_pred cccCCHHHHHHHHHHHHhhCC
Q 005818 304 YERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 304 ~~~~~~~~~l~~~~~~~~~~~ 324 (676)
+|+++++++|+++++||+.+.
T Consensus 334 ~p~~~l~egl~~~~~~~~~~~ 354 (378)
T PLN00016 334 TPKFDLVEDLKDRYELYFGRG 354 (378)
T ss_pred CCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999865
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=239.00 Aligned_cols=290 Identities=20% Similarity=0.316 Sum_probs=240.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcE-EEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYK-IVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+++||||||+|.+|+++.+.+.+++..-+ -+.... -.+||++.++.+++++..++..|
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------kd~DLt~~a~t~~lF~~ekPthV 59 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------KDADLTNLADTRALFESEKPTHV 59 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------ccccccchHHHHHHHhccCCcee
Confidence 47899999999999999999999964222 222211 14899999999999998999999
Q ss_pred EEccccCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC----CCCCCCC-h
Q 005818 86 MHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA----SQLLPTN-P 159 (676)
Q Consensus 86 ih~a~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~----~~~~p~~-~ 159 (676)
||+|+.+.. -.....+.+++..|+.-.-|++..|.++| +++++++.|.++|.+....++ +|+ .|+.|.| .
T Consensus 60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPI---dEtmvh~gpphpsN~g 135 (315)
T KOG1431|consen 60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPI---DETMVHNGPPHPSNFG 135 (315)
T ss_pred eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCC---CHHHhccCCCCCCchH
Confidence 999988752 22334567899999999999999999999 999999999999999887765 454 3444544 6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHHH----HCCC-CceeecCCCceEeeeeHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLA----MKGK-PLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~v~v~ 230 (676)
|+.+|.++.-.-+.|+.++|..++.+-|.++|||.+.. ...++.++++. .+|. .+.+||.|...|+|+|++
T Consensus 136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~ 215 (315)
T KOG1431|consen 136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD 215 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence 99999888888899999999999999999999997732 23566666554 3443 789999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEcCCC--cccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCC
Q 005818 231 DVAEAFDTILHKGEVGHVYNIGTKK--ERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVT 308 (676)
Q Consensus 231 D~a~ai~~~~~~~~~~~~y~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~ 308 (676)
|+|++++.++.+-+.-+..+++.++ .+|++|+++.+.++++.... +.|....+....+-..|++|++.|+|.|+++
T Consensus 216 DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~--l~~DttK~DGq~kKtasnsKL~sl~pd~~ft 293 (315)
T KOG1431|consen 216 DLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGK--LVWDTTKSDGQFKKTASNSKLRSLLPDFKFT 293 (315)
T ss_pred HHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCce--EEeeccCCCCCcccccchHHHHHhCCCcccC
Confidence 9999999999876555667888887 89999999999999988653 6677777777888899999999999999996
Q ss_pred -HHHHHHHHHHHHhhC
Q 005818 309 -WEEGLQKTMKWYISN 323 (676)
Q Consensus 309 -~~~~l~~~~~~~~~~ 323 (676)
++++|.++++||.++
T Consensus 294 ~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 294 PLEQAISETVQWYLDN 309 (315)
T ss_pred hHHHHHHHHHHHHHHh
Confidence 999999999999975
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=285.85 Aligned_cols=270 Identities=20% Similarity=0.277 Sum_probs=204.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee------------------eccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE------------------YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
.|+|+|||||||||++|++.|+++||+|. ++.+|++|.+.+.++++++ |+|||+|+..+
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~Vih~Aa~~~- 97 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGV--DHVFNLAADMG- 97 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCC--CEEEEcccccC-
Confidence 47999999999999999999999998762 3447898888888888766 99999998542
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC-CCCCCCCchhhhHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED-KPNFTGSFYSKTKAMV 523 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~-~~~~p~~~Y~~sK~~~ 523 (676)
.......++...+..|+.++.+|+++|++.++ ++|++||+.+|+.....+ ...++.|++ .|..|.+.|+.+|..+
T Consensus 98 -~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~--~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 98 -GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLE--TNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred -CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccC--cCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 11222334556678999999999999999997 677888889997543211 011233433 3677889999999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceecc-C-----CCccchhhHHHHHHHHHhc
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNI-P-----NSMTILDELLPISVEMAKR 585 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~-~-----~~~~~v~D~a~~~~~~~~~ 585 (676)
|++++.+.+.++++++++|++++|||. .|+.+++.....+.. + .+|+|++|++++++.+++.
T Consensus 175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~ 254 (370)
T PLN02695 175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS 254 (370)
T ss_pred HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence 999999877789999999999999984 245555543332222 2 2899999999999998887
Q ss_pred CCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhh
Q 005818 586 NLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVF 663 (676)
Q Consensus 586 ~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~ 663 (676)
+..++||+++++.+|+.|+++.+.+..|.+.++...+.... . ....+|++|++++++|. .+|+++|++++.
T Consensus 255 ~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~----~---~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~ 327 (370)
T PLN02695 255 DFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEG----V---RGRNSDNTLIKEKLGWAPTMRLKDGLRITYF 327 (370)
T ss_pred cCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCC----c---cccccCHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 66789999999999999999999999986544432221110 0 12347999999876665 489999999876
Q ss_pred ccC
Q 005818 664 EPN 666 (676)
Q Consensus 664 ~~~ 666 (676)
.+.
T Consensus 328 ~~~ 330 (370)
T PLN02695 328 WIK 330 (370)
T ss_pred HHH
Confidence 543
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=284.83 Aligned_cols=278 Identities=17% Similarity=0.179 Sum_probs=207.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-e------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-F------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|||+|||||||||++|+++|+++|++ | .++.+|++|.+++.++++..++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999864 2 2357899999999999987678999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc---------CC-cEEEeecCeeeecCCCCCCC----CCCCccc
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN---------GL-LMMNYATGCIFEYDAKHPEG----TGIGFKE 505 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~-~~v~~sS~~v~~~~~~~~~~----~~~~~~~ 505 (676)
||.. .......+++.++++|+.|+.+++++|+++ ++ ++|++||+.+|+.... +.. ...+..+
T Consensus 81 A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-~~~~~~~~~~~~~~ 156 (352)
T PRK10084 81 AAES---HVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPH-PDEVENSEELPLFT 156 (352)
T ss_pred Cccc---CCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCc-cccccccccCCCcc
Confidence 9976 333344567889999999999999999874 33 7889999999975321 100 0112355
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccC-----CCccch
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTIL 572 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v 572 (676)
|+.+..|.+.|+.||..+|++++.+.+.++++++++|++++|||.. ++..+..+......+ .+|+|+
T Consensus 157 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 157 ETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 6667788899999999999999988777899999999999999862 234444444422222 289999
Q ss_pred hhHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCccc-ccchHhhhhHhccC--CCccccChhHHHhhC
Q 005818 573 DELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWT-NFTLEEQAKVIVAP--RSNNELDASKLKKEF 648 (676)
Q Consensus 573 ~D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~--~~~~~ld~~k~~~~~ 648 (676)
+|+|++++.+++++. +++||+++++.+|+.|+++.+++.+|...+.. +... ........+ .....+|++|+++.+
T Consensus 237 ~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~l 315 (352)
T PRK10084 237 EDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYRE-QITYVADRPGHDRRYAIDASKISREL 315 (352)
T ss_pred HHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhh-hccccccCCCCCceeeeCHHHHHHHc
Confidence 999999999988763 57999999999999999999999998532211 1100 000000011 113468999998865
Q ss_pred CCC--CCHHHHHHHhhhccCC
Q 005818 649 PEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 649 ~~~--~~~~~~l~~~~~~~~~ 667 (676)
+|. .+++++|++++..+.+
T Consensus 316 g~~p~~~l~~~l~~~~~~~~~ 336 (352)
T PRK10084 316 GWKPQETFESGIRKTVEWYLA 336 (352)
T ss_pred CCCCcCCHHHHHHHHHHHHHh
Confidence 554 4999999998876544
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=278.45 Aligned_cols=293 Identities=17% Similarity=0.165 Sum_probs=211.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCC----CCCCCeEEEEecCCCHHHHHHHHc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPS----RLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
.+++|+||||||+||||++|++.|+++ +++|+++.|..... ....+... ....+++++.+|++|.+.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i- 126 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF- 126 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH-
Confidence 466789999999999999999999999 67777665542111 11111000 01135889999999999999998
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecc--cccCCCC-CCcCCCCCC-----
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTD--EVYGETD-EDAVVGNHE----- 150 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~--~vyg~~~-~~~~~~~~e----- 150 (676)
.++|+|||+|+...............+.|+.++.+++++|++...+++|||+||. .+|+... .......+|
T Consensus 127 -~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~ 205 (367)
T PLN02686 127 -DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD 205 (367)
T ss_pred -HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence 6799999999986543211122355678999999999999986338999999995 5787421 110011122
Q ss_pred -CCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 151 -ASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 151 -~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+.+..|.++|+.+|..+|.+++.+++.+|++++++||++||||+....... .+. ....+. +.+++++. ++|+||
T Consensus 206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~-~~~-~~~~g~-~~~~g~g~--~~~v~V 280 (367)
T PLN02686 206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST-ATI-AYLKGA-QEMLADGL--LATADV 280 (367)
T ss_pred hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh-hHH-HHhcCC-CccCCCCC--cCeEEH
Confidence 233456778999999999999999888899999999999999986432211 122 334443 45556554 479999
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCC-CCCCcccccCHHHHHh-CCCc
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR-PFNDQRYFLDVQKLKQ-LGWY 304 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~-lg~~ 304 (676)
+|++++++.+++.. ..+++| +++++.+++.|+++.+.+.+|.+.. ....+.+ +.....+..|++|+++ |||.
T Consensus 281 ~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~d~~~~~~d~~kl~~~l~~~ 357 (367)
T PLN02686 281 ERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN--KIAGNSSSDDTPARFELSNKKLSRLMSRT 357 (367)
T ss_pred HHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC--cCCCchhhcCCcccccccHHHHHHHHHHh
Confidence 99999999999852 356688 8888999999999999999987543 2223333 4556778899999985 9999
Q ss_pred ccCC
Q 005818 305 ERVT 308 (676)
Q Consensus 305 ~~~~ 308 (676)
|+-.
T Consensus 358 ~~~~ 361 (367)
T PLN02686 358 RRCC 361 (367)
T ss_pred hhcc
Confidence 8743
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=278.45 Aligned_cols=266 Identities=15% Similarity=0.136 Sum_probs=197.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++|+|+||||+||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC--DGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC--CEEE
Confidence 45789999999999999999999999865 23567999999999999987 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecC-eeeecCCCCCCCCCCCccccCC------C
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATG-CIFEYDAKHPEGTGIGFKEEDK------P 509 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~------~ 509 (676)
|+|+.. ..++...+++|+.|+.+++++|++.++ ++|++||. .+|+.....+ ... .+|+. +
T Consensus 87 h~A~~~--------~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~---~~~-~~E~~~~~~~~~ 154 (342)
T PLN02214 87 HTASPV--------TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDP---EAV-VDESCWSDLDFC 154 (342)
T ss_pred EecCCC--------CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCC---Ccc-cCcccCCChhhc
Confidence 999954 245678899999999999999999987 56777775 5775432211 111 33332 3
Q ss_pred CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH---------HHHHHHhcCcee--ccCCCccchhhHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------FITKISRYNKVV--NIPNSMTILDELLPI 578 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~--~~~~~~~~v~D~a~~ 578 (676)
..|.+.|+.||.++|++++.+.+..+++++++|++++|||+. .+.+++.+.... ....+|+||+|+|++
T Consensus 155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a 234 (342)
T PLN02214 155 KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALA 234 (342)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHH
Confidence 346688999999999999998777799999999999999962 112333333221 122389999999999
Q ss_pred HHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCCCHHHH
Q 005818 579 SVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKES 657 (676)
Q Consensus 579 ~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~~~~~~ 657 (676)
++.+++++ .+|.||+++ +.+++.|+++.+++.++.. .+ +.... ...........+|++|+++++|.+.+|+++
T Consensus 235 ~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~-~~---~~~~~-~~~~~~~~~~~~d~~k~~~LG~~p~~lee~ 308 (342)
T PLN02214 235 HVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY-PL---PTKCK-DEKNPRAKPYKFTNQKIKDLGLEFTSTKQS 308 (342)
T ss_pred HHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC-CC---CCCCc-cccCCCCCccccCcHHHHHcCCcccCHHHH
Confidence 99999876 457999987 5789999999999998531 11 11000 000011114458999998766656799999
Q ss_pred HHHhhhccCCC
Q 005818 658 LIKNVFEPNKK 668 (676)
Q Consensus 658 l~~~~~~~~~~ 668 (676)
|++++..+.+.
T Consensus 309 i~~~~~~~~~~ 319 (342)
T PLN02214 309 LYDTVKSLQEK 319 (342)
T ss_pred HHHHHHHHHHc
Confidence 99999876553
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=278.96 Aligned_cols=267 Identities=19% Similarity=0.177 Sum_probs=204.0
Q ss_pred EEEcCCcchhHHHHHHHHHcCCcee----eccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhh
Q 005818 388 LIYGRTGWIGGLLSKICEKKGIPFE----YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNV 463 (676)
Q Consensus 388 litG~~G~iG~~l~~~L~~~g~~v~----~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv 463 (676)
||||||||||++|++.|+++|++|. ...+|++|.+.+.++++..++|+|||||+..+ ....+..++...++.|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~~~~~~~n~ 78 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVG--GIHANMTYPADFIRENL 78 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeec--ccchhhhCcHHHHHHHh
Confidence 6999999999999999999998753 45789999999999999888899999999752 12334466778899999
Q ss_pred hhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC----CCCCCC-chhhhHHHHHHHHHHccCeEEEE
Q 005818 464 VGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK----PNFTGS-FYSKTKAMVEELLKEYDNVCTLR 537 (676)
Q Consensus 464 ~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~----~~~p~~-~Y~~sK~~~E~~~~~~~~~~~l~ 537 (676)
.++.+|+++|++.++ ++|++||+.||+.....| .+|+. +..|.+ .|+.||..+|++++.+.+..+++
T Consensus 79 ~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~ 151 (306)
T PLN02725 79 QIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQP-------IPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWD 151 (306)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCC-------CCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999987 688999999997543333 33332 444544 49999999999998887677899
Q ss_pred eeecccCCCCChHH------------HHHHH----HhcCceec-cC-----CCccchhhHHHHHHHHHhcC-CCceeEcc
Q 005818 538 VRMPISSDLNNPRN------------FITKI----SRYNKVVN-IP-----NSMTILDELLPISVEMAKRN-LSGIWNFT 594 (676)
Q Consensus 538 ~~~~r~~~~~g~~~------------~~~~~----~~~~~~~~-~~-----~~~~~v~D~a~~~~~~~~~~-~~g~yn~~ 594 (676)
++++|++++|||.. ++..+ ..+.+... .+ .+|+|++|++++++.+++.. ..+.||++
T Consensus 152 ~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~ 231 (306)
T PLN02725 152 AISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEHVNVG 231 (306)
T ss_pred EEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCcceEeC
Confidence 99999999999951 22221 22333222 22 28999999999999999875 44789999
Q ss_pred CCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccCCCC
Q 005818 595 NPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPNKKP 669 (676)
Q Consensus 595 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~~~ 669 (676)
+++.+|+.|+++.+++.++.+..+...+.. ........+|++|+++++|.+ .+|+++|++++..+.+..
T Consensus 232 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~~ 301 (306)
T PLN02725 232 SGDEVTIKELAELVKEVVGFEGELVWDTSK------PDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLENY 301 (306)
T ss_pred CCCcccHHHHHHHHHHHhCCCCceeecCCC------CCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999865443221110 111124468999998876655 599999999987666543
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=301.91 Aligned_cols=272 Identities=14% Similarity=0.141 Sum_probs=203.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHc-CCce-------------------eeccccCCChHH-HHHHhhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------EYGKGRLENRSQ-LLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~Dl~d~~~-~~~~~~~~~~d~Vih~a~~ 442 (676)
+|+|+|||||||||++|+++|+++ ||+| +++.+|++|... ++++++++ |+|||+||.
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~--D~ViHlAa~ 392 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKC--DVVLPLVAI 392 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCC--CEEEECccc
Confidence 478999999999999999999986 6654 456789998655 56677765 999999997
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCC------C-CCCCc
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP------N-FTGSF 515 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~------~-~p~~~ 515 (676)
. .+..+..++...+++|+.++.+++++|++.+.++||+||+.+|+.....+ .+|+.+ . .|.+.
T Consensus 393 ~---~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~-------~~E~~~~~~~~p~~~p~s~ 462 (660)
T PRK08125 393 A---TPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKY-------FDEDTSNLIVGPINKQRWI 462 (660)
T ss_pred c---CchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCC-------cCccccccccCCCCCCccc
Confidence 6 34344567778899999999999999999988889999999997543222 333332 1 34568
Q ss_pred hhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH----------------HHHHHHhcCceeccC-----CCccchhh
Q 005818 516 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN----------------FITKISRYNKVVNIP-----NSMTILDE 574 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~----------------~~~~~~~~~~~~~~~-----~~~~~v~D 574 (676)
|+.||.++|++++.+.+.++++++++|++++|||+. ++.++..+++....+ .+|+|++|
T Consensus 463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D 542 (660)
T PRK08125 463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD 542 (660)
T ss_pred hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence 999999999999998777899999999999999852 344555555543332 28999999
Q ss_pred HHHHHHHHHhcCC----CceeEccCCC-cccHHHHHHHHHhhcCCCCcccccchHh-hh----hHhc----cCCCccccC
Q 005818 575 LLPISVEMAKRNL----SGIWNFTNPG-VVSHNEILEMYKAYIDPGFKWTNFTLEE-QA----KVIV----APRSNNELD 640 (676)
Q Consensus 575 ~a~~~~~~~~~~~----~g~yn~~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~----~~~~----~~~~~~~ld 640 (676)
+|++++.+++++. +++||+++++ .+|+.|+++.+.+.+|.......++... .. .... .......+|
T Consensus 543 va~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (660)
T PRK08125 543 GIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622 (660)
T ss_pred HHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCC
Confidence 9999999998742 3599999985 7999999999999998532111222110 00 0000 011134579
Q ss_pred hhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 641 ASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 641 ~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
++|+++.++|. .+++++|++++..+.+
T Consensus 623 ~~ka~~~LGw~P~~~lee~l~~~i~~~~~ 651 (660)
T PRK08125 623 IRNARRLLDWEPKIDMQETIDETLDFFLR 651 (660)
T ss_pred hHHHHHHhCCCCCCcHHHHHHHHHHHHHh
Confidence 99998877765 4999999999876554
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=278.45 Aligned_cols=269 Identities=21% Similarity=0.212 Sum_probs=203.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
+|+|+||||+||||++|++.|+++|++| .++.+|++|.+.+.++++..++|+|||+|
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 4689999999999999999999999866 24668999999999999988899999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCC-CCCCCCCCccccCCCCCCCCchh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAK-HPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~-~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
+.. .+..+..++...+++|+.++.+++++|++.+ + ++|++||+.+|+.... .+ ..|+.+..|.+.|+
T Consensus 84 ~~~---~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~-------~~e~~~~~p~~~Y~ 153 (349)
T TIGR02622 84 AQP---LVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWG-------YRETDPLGGHDPYS 153 (349)
T ss_pred ccc---ccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCC-------CccCCCCCCCCcch
Confidence 965 4445566788899999999999999999876 4 6888888899965321 12 45555677889999
Q ss_pred hhHHHHHHHHHHccCeE-------EEEeeecccCCCCChH---------HHHHHHHhcCceecc----CCCccchhhHHH
Q 005818 518 KTKAMVEELLKEYDNVC-------TLRVRMPISSDLNNPR---------NFITKISRYNKVVNI----PNSMTILDELLP 577 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~-------~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~----~~~~~~v~D~a~ 577 (676)
.||.++|.+++.+.+.+ +++++++|++++|||+ .++..+..++..... ..+|+|++|+|+
T Consensus 154 ~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~ 233 (349)
T TIGR02622 154 SSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLS 233 (349)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHH
Confidence 99999999998864332 8999999999999984 233444444443221 229999999999
Q ss_pred HHHHHHhcC------CCceeEccCC--CcccHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHHHhhC
Q 005818 578 ISVEMAKRN------LSGIWNFTNP--GVVSHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEF 648 (676)
Q Consensus 578 ~~~~~~~~~------~~g~yn~~~~--~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~ 648 (676)
+++.++++. .+++||++++ +++++.|+++.+.+.++. ++.+...+. .. .........+|++|+++++
T Consensus 234 a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~d~~k~~~~l 309 (349)
T TIGR02622 234 GYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD-LN---HPHEARLLKLDSSKARTLL 309 (349)
T ss_pred HHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC-CC---CCcccceeecCHHHHHHHh
Confidence 999887641 2479999985 799999999999987753 222211000 00 0111114567999998866
Q ss_pred CCC--CCHHHHHHHhhhccC
Q 005818 649 PEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 649 ~~~--~~~~~~l~~~~~~~~ 666 (676)
+|. .+++++|++++..+.
T Consensus 310 gw~p~~~l~~gi~~~i~w~~ 329 (349)
T TIGR02622 310 GWHPRWGLEEAVSRTVDWYK 329 (349)
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 665 489999999876554
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=253.21 Aligned_cols=267 Identities=18% Similarity=0.204 Sum_probs=214.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++||||||+||||++.+-+|+++||.| .++.+|++|.+.++++|+..++|.|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 579999999999999999999999754 78899999999999999999999999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC-CCCc
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF-TGSF 515 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~-p~~~ 515 (676)
|+|+.. .+..+.++|..++.+|+.|+.+||+.|+++++ .+|+.||+.|||.+..-| ..|..|.. |.++
T Consensus 83 Hfa~~~---~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip-------~te~~~t~~p~~p 152 (343)
T KOG1371|consen 83 HFAALA---AVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVP-------ITEEDPTDQPTNP 152 (343)
T ss_pred eehhhh---ccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceee-------ccCcCCCCCCCCc
Confidence 999988 78889999999999999999999999999997 466667778888777666 44444555 9999
Q ss_pred hhhhHHHHHHHHHHccCeEEEEeeecccCCCCC--hH------------H---HHHHHHhcCc--eeccC----------
Q 005818 516 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN--PR------------N---FITKISRYNK--VVNIP---------- 566 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g--~~------------~---~~~~~~~~~~--~~~~~---------- 566 (676)
||.+|.+.|.++.+++...++.++.+|.++++| |. + .+.+.+.+.. ...++
T Consensus 153 yg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~ 232 (343)
T KOG1371|consen 153 YGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTI 232 (343)
T ss_pred chhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCe
Confidence 999999999999999888889999999999998 32 1 2233333221 11111
Q ss_pred -CCccchhhHHHHHHHHHhcCC----CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccCh
Q 005818 567 -NSMTILDELLPISVEMAKRNL----SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 567 -~~~~~v~D~a~~~~~~~~~~~----~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
.+++|+-|+|+.++.++.+.. -++||++++...++.+|+..+++..|.++++.-++. . .....+.-.+.
T Consensus 233 vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~-R-----~gdv~~~ya~~ 306 (343)
T KOG1371|consen 233 VRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR-R-----NGDVAFVYANP 306 (343)
T ss_pred eecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC-C-----CCCceeeeeCh
Confidence 178899999999999998753 269999999999999999999999999877744432 1 11112445588
Q ss_pred hHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 642 SKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 642 ~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
+++++.++|. .++++++++....-.+
T Consensus 307 ~~a~~elgwk~~~~iee~c~dlw~W~~~ 334 (343)
T KOG1371|consen 307 SKAQRELGWKAKYGLQEMLKDLWRWQKQ 334 (343)
T ss_pred HHHHHHhCCccccCHHHHHHHHHHHHhc
Confidence 8886555554 5899999998765443
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-32 Score=258.89 Aligned_cols=273 Identities=17% Similarity=0.177 Sum_probs=200.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
.+|+|+|||||||||+++++.|+.+||.| ..+.+|+.|++++++++++| |.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc--dgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC--DGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC--CEE
Confidence 45799999999999999999999999965 67889999999999999999 999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecC-eeeecCCCCCCCCCCCccccCCC-----
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATG-CIFEYDAKHPEGTGIGFKEEDKP----- 509 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~----- 509 (676)
||+|++. ..+.. ....+..+.+|.||.|+|++|++.. +|+|+++|| ......... .+....+.|+...
T Consensus 83 fH~Asp~---~~~~~-~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~-~~~~~vvdE~~wsd~~~~ 157 (327)
T KOG1502|consen 83 FHTASPV---DFDLE-DPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPN-IGENSVVDEESWSDLDFC 157 (327)
T ss_pred EEeCccC---CCCCC-CcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcC-CCCCcccccccCCcHHHH
Confidence 9999976 22221 2233789999999999999999998 777666666 333222111 1112223332211
Q ss_pred CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------HHHHHHHhcCce--eccCCCccchhhHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NFITKISRYNKV--VNIPNSMTILDELLPI 578 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~--~~~~~~~~~v~D~a~~ 578 (676)
..-...|..||..||+.++.+.+..+++.+.+.|+.|+||. ..+..++.|... ......|+||+|+|.+
T Consensus 158 ~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~A 237 (327)
T KOG1502|consen 158 RCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALA 237 (327)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHH
Confidence 11125799999999999999988889999999999999996 234555555321 1222268999999999
Q ss_pred HHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHH
Q 005818 579 SVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKE 656 (676)
Q Consensus 579 ~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~ 656 (676)
++.+++++ ..|.|.+.++.. ++.|+++.+.+.+.... ++...... .........++++|+++++++. .+|++
T Consensus 238 Hv~a~E~~~a~GRyic~~~~~-~~~ei~~~l~~~~P~~~----ip~~~~~~-~~~~~~~~~~~~~k~k~lg~~~~~~l~e 311 (327)
T KOG1502|consen 238 HVLALEKPSAKGRYICVGEVV-SIKEIADILRELFPDYP----IPKKNAEE-HEGFLTSFKVSSEKLKSLGGFKFRPLEE 311 (327)
T ss_pred HHHHHcCcccCceEEEecCcc-cHHHHHHHHHHhCCCCC----CCCCCCcc-ccccccccccccHHHHhcccceecChHH
Confidence 99999998 568999988554 49999999999875432 22211100 0010012357999999999654 89999
Q ss_pred HHHHhhhccCCC
Q 005818 657 SLIKNVFEPNKK 668 (676)
Q Consensus 657 ~l~~~~~~~~~~ 668 (676)
.+.+++..+.++
T Consensus 312 ~~~dt~~sl~~~ 323 (327)
T KOG1502|consen 312 TLSDTVESLREK 323 (327)
T ss_pred HHHHHHHHHHHh
Confidence 999999887765
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=238.51 Aligned_cols=312 Identities=25% Similarity=0.294 Sum_probs=249.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccC--CC--CCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN--LN--PSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~--~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
|+|+.||||-||+-|+.|++.|+++ |++|.++.|......... +. ......+++++.+||+|...+.++++..+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 4689999999999999999999999 688888777644333322 11 12234458999999999999999999899
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-CceEEEEecccccCCCCCCcCCCCCCCCCCCCCChh
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ-IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 160 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 160 (676)
+|-|+|+|+......++++|....+.+-.|+.+||++.+..+. -.||...||...||.....+. .|.+|..|.+||
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq---~E~TPFyPrSPY 155 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQ---KETTPFYPRSPY 155 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCcc---ccCCCCCCCCHH
Confidence 9999999999999999999999999999999999999998873 468999999999998876554 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
+.+|+.+--+...|++.||+-++.=+..+-=+|..... +-+...+.++..|.. -...|+-+..|+|=|..|.++++
T Consensus 156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 99999999999999999999877655555555543222 222333334444533 33458888999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc-----------------ceeeec--CCCCCCcccccCHHH
Q 005818 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT-----------------QIKFVE--NRPFNDQRYFLDVQK 297 (676)
Q Consensus 237 ~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~k 297 (676)
+.+++++. ...|.++.|+..|++|+.+...+..|.+... .+.+.+ .+|....-..-|.+|
T Consensus 236 wlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~K 314 (345)
T COG1089 236 WLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTK 314 (345)
T ss_pred HHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHH
Confidence 99999887 4589999999999999999999988865331 111111 234444455679999
Q ss_pred HH-hCCCcccCCHHHHHHHHHHHHhhC
Q 005818 298 LK-QLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 298 ~~-~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
++ +|||+|++++++.+++|+++..+.
T Consensus 315 A~~~LGW~~~~~~~elv~~Mv~~dl~~ 341 (345)
T COG1089 315 AKEKLGWRPEVSLEELVREMVEADLEA 341 (345)
T ss_pred HHHHcCCccccCHHHHHHHHHHHHHHH
Confidence 98 599999999999999999887653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=298.13 Aligned_cols=274 Identities=17% Similarity=0.153 Sum_probs=207.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHc--CCce------------------------eeccccCCChHHHHHHhhccCCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKK--GIPF------------------------EYGKGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~--g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
+.|+|||||||||||++|+++|+++ +++| .++.+|++|.+.+.+++...++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 3479999999999999999999998 4433 3456899998888877755567999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
||||+.. ..+.+..++..++++|+.++.+++++|++.+ + ++|++||+.+|+.....+. . -..|+.+..|.+
T Consensus 85 iHlAa~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~---~-~~~E~~~~~p~~ 157 (668)
T PLN02260 85 MHFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAD---V-GNHEASQLLPTN 157 (668)
T ss_pred EECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccc---c-CccccCCCCCCC
Confidence 9999976 4444556677889999999999999999987 4 7889999999975432210 0 024455666889
Q ss_pred chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCC-----CccchhhHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPN-----SMTILDELLPISVE 581 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~ 581 (676)
.|+.+|..+|++++.+.+.++++++++|++++|||.. ++..+..+......++ +|+||+|+|+++..
T Consensus 158 ~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~ 237 (668)
T PLN02260 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV 237 (668)
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence 9999999999999988767799999999999999962 3344444444333222 89999999999999
Q ss_pred HHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcc-cccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHH
Q 005818 582 MAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKW-TNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESL 658 (676)
Q Consensus 582 ~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l 658 (676)
++++. .+++||+++++.+|+.|+++.+++.+|.+... ....... .... ....+|++|+++++|.+ ++|+++|
T Consensus 238 ~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~----p~~~-~~~~~d~~k~~~lGw~p~~~~~egl 312 (668)
T PLN02260 238 VLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENR----PFND-QRYFLDDQKLKKLGWQERTSWEEGL 312 (668)
T ss_pred HHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCC----CCCc-ceeecCHHHHHHcCCCCCCCHHHHH
Confidence 98876 45799999999999999999999999965321 1110000 0111 13357999998876655 6999999
Q ss_pred HHhhhccCCC
Q 005818 659 IKNVFEPNKK 668 (676)
Q Consensus 659 ~~~~~~~~~~ 668 (676)
++++..+.+.
T Consensus 313 ~~~i~w~~~~ 322 (668)
T PLN02260 313 KKTMEWYTSN 322 (668)
T ss_pred HHHHHHHHhC
Confidence 9998776653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-31 Score=269.05 Aligned_cols=272 Identities=13% Similarity=0.126 Sum_probs=200.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
+|+|+||||+||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGC--ETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCC--CEEE
Confidence 3689999999999999999999999765 23467999999999998876 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC---
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT--- 512 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p--- 512 (676)
|+||.. .......++...+++|+.|+.+++++|.+. ++ ++|++||..+|++..... + ...+.+|+.+..|
T Consensus 83 h~A~~~---~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~-~-~~~~~~E~~~~~p~~~ 157 (325)
T PLN02989 83 HTASPV---AITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL-G-PNDVVDETFFTNPSFA 157 (325)
T ss_pred EeCCCC---CCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccC-C-CCCccCcCCCCchhHh
Confidence 999965 233334455678899999999999999885 44 678888887776532110 0 0112455555443
Q ss_pred ---CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------HHHHHHHhcCcee-ccCCCccchhhHHHHH
Q 005818 513 ---GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NFITKISRYNKVV-NIPNSMTILDELLPIS 579 (676)
Q Consensus 513 ---~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~-~~~~~~~~v~D~a~~~ 579 (676)
.+.|+.||..+|++++.+.+.++++++++|++++|||+ .++.+++.++... ....+|+||+|+|+++
T Consensus 158 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~ 237 (325)
T PLN02989 158 EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAH 237 (325)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHH
Confidence 36899999999999998877789999999999999986 2344555554332 1224899999999999
Q ss_pred HHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHH
Q 005818 580 VEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKES 657 (676)
Q Consensus 580 ~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~ 657 (676)
+.+++++. .|+||++ ++.+|+.|+++.+.+.++.. .... ... ...........+|++|+++++|.+ .+++++
T Consensus 238 ~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~-~~~---~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~g 311 (325)
T PLN02989 238 VKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIAD-RNE---DITELNSVTFNVCLDKVKSLGIIEFTPTETS 311 (325)
T ss_pred HHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCC-CCC---CcccccccCcCCCHHHHHHcCCCCCCCHHHH
Confidence 99998763 5799995 56899999999999998732 1110 000 000001113467999998866645 699999
Q ss_pred HHHhhhccCCC
Q 005818 658 LIKNVFEPNKK 668 (676)
Q Consensus 658 l~~~~~~~~~~ 668 (676)
|++++..+..+
T Consensus 312 i~~~~~~~~~~ 322 (325)
T PLN02989 312 LRDTVLSLKEK 322 (325)
T ss_pred HHHHHHHHHHh
Confidence 99999876554
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=268.18 Aligned_cols=265 Identities=16% Similarity=0.196 Sum_probs=198.1
Q ss_pred EEEEcCCcchhHHHHHHHHHcCC-cee-----------------eccccCCChHHHHHHhhc--cCCCEEEECccccCCC
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGI-PFE-----------------YGKGRLENRSQLLADIQN--VKPTHVFNAAGVTGRP 446 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~-~v~-----------------~~~~Dl~d~~~~~~~~~~--~~~d~Vih~a~~~~~~ 446 (676)
|+|||||||||++|++.|+++|+ +|. .+.+|+.+.+.++.+.+. .++|+|||+|+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~--- 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS--- 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc---
Confidence 69999999999999999999997 452 123566677767665541 3579999999964
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
. ....++...+++|+.++.+++++|++.++++|++||+.+|+... . ++.+++.+..|.+.|+.+|..+|++
T Consensus 78 ~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~------~~~e~~~~~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 78 D--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-A------GFREGRELERPLNVYGYSKFLFDQY 148 (314)
T ss_pred C--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-C------CcccccCcCCCCCHHHHHHHHHHHH
Confidence 2 23456778889999999999999999999999999999997532 1 2455555556788999999999999
Q ss_pred HHHcc--CeEEEEeeecccCCCCChHH------------HHHHHHhcCceecc------C-----CCccchhhHHHHHHH
Q 005818 527 LKEYD--NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNI------P-----NSMTILDELLPISVE 581 (676)
Q Consensus 527 ~~~~~--~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~------~-----~~~~~v~D~a~~~~~ 581 (676)
++.+. ...+++++++|++++|||.. ++..+..+...... + .+|+|++|++++++.
T Consensus 149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~ 228 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW 228 (314)
T ss_pred HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence 98742 23467899999999999862 23344444443221 1 289999999999999
Q ss_pred HHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHH
Q 005818 582 MAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLI 659 (676)
Q Consensus 582 ~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~ 659 (676)
++.+...|+||+++++++|+.|+++.+++.+|.+..+...+.+.... ........+|++|++++++|. ++++++|+
T Consensus 229 ~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~ 306 (314)
T TIGR02197 229 LLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR--GKYQYFTQADITKLRAAGYYGPFTTLEEGVK 306 (314)
T ss_pred HHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc--cccccccccchHHHHHhcCCCCcccHHHHHH
Confidence 99886668999999999999999999999999764322222111100 011124568999999988875 59999999
Q ss_pred Hhhhcc
Q 005818 660 KNVFEP 665 (676)
Q Consensus 660 ~~~~~~ 665 (676)
+++..+
T Consensus 307 ~~~~~~ 312 (314)
T TIGR02197 307 DYVQWL 312 (314)
T ss_pred HHHHHH
Confidence 987653
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=269.43 Aligned_cols=269 Identities=14% Similarity=0.135 Sum_probs=204.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee----------------------------eccccCCChHHHHHHhhccCCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE----------------------------YGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~----------------------------~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
+++|+|||||||||++|+++|+++|++|. ++.+|++|++.+.++++..++|+
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~ 84 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA 84 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence 36899999999999999999999997652 34678999999999888667899
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|||+|+.. .......++...+++|+.++.+++++|++.++ ++|++||+.+|+.....+ .+|+.+..|.+
T Consensus 85 vih~a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-------~~E~~~~~~~~ 154 (352)
T PLN02240 85 VIHFAGLK---AVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVP-------CTEEFPLSATN 154 (352)
T ss_pred EEEccccC---CccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC-------CCCCCCCCCCC
Confidence 99999965 22333456778899999999999999999886 678888888886443333 56677888889
Q ss_pred chhhhHHHHHHHHHHccC-eEEEEeeecccCCCCChH-----------------HHHHHHHhcCc-ee-ccC--------
Q 005818 515 FYSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPR-----------------NFITKISRYNK-VV-NIP-------- 566 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~-----------------~~~~~~~~~~~-~~-~~~-------- 566 (676)
.|+.||..+|++++.+.+ ..+++++++|++++||+. .++.++..++. .+ ..+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 234 (352)
T PLN02240 155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG 234 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence 999999999999988643 357888999999998852 23444444332 11 111
Q ss_pred ---CCccchhhHHHHHHHHHhcC-----C-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCcc
Q 005818 567 ---NSMTILDELLPISVEMAKRN-----L-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNN 637 (676)
Q Consensus 567 ---~~~~~v~D~a~~~~~~~~~~-----~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 637 (676)
.+|+|++|+|++++.++++. . +++||+++++++|+.|+++.+.+.+|.+.++...+... ......
T Consensus 235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------~~~~~~ 308 (352)
T PLN02240 235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRP------GDAEEV 308 (352)
T ss_pred CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCC------CChhhh
Confidence 28899999999998887642 2 36999999999999999999999999765553322110 001133
Q ss_pred ccChhHHHhhCCCC--CCHHHHHHHhhhccCCC
Q 005818 638 ELDASKLKKEFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 638 ~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
.+|++|+++.++|. .+++++|++++..+.+.
T Consensus 309 ~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 341 (352)
T PLN02240 309 YASTEKAEKELGWKAKYGIDEMCRDQWNWASKN 341 (352)
T ss_pred hcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 46999998866655 38999999999877664
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=265.83 Aligned_cols=268 Identities=19% Similarity=0.208 Sum_probs=205.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcC--Cce------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKG--IPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g--~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
+|+|||||||||++|+++|+++| ++| .++.+|++|++++.+++++.++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 49999999999999999999987 433 2455799999999999998667999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
|+.. ..+.+..+++.++++|+.++.+++++|.+. +++++++||..+|+...... ...|+.+..|.+.|+
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~------~~~e~~~~~~~~~Y~ 151 (317)
T TIGR01181 81 AAES---HVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD------AFTETTPLAPSSPYS 151 (317)
T ss_pred cccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC------CcCCCCCCCCCCchH
Confidence 9965 344455677788999999999999999986 45899999999997543211 245566777788999
Q ss_pred hhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccC-----CCccchhhHHHHHHHHHh
Q 005818 518 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIP-----NSMTILDELLPISVEMAK 584 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~ 584 (676)
.+|..+|.+++.+.+..+++++++|++++|||. .++.++..+......+ .+|+|++|+++++..+++
T Consensus 152 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~ 231 (317)
T TIGR01181 152 ASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE 231 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc
Confidence 999999999998766788999999999999985 2344455554432222 289999999999999998
Q ss_pred cCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHh
Q 005818 585 RNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKN 661 (676)
Q Consensus 585 ~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~ 661 (676)
+.. +++||+++++++|+.|+++.+.+.+|.+.......... ........+|++|+++.+++. .+|+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~ 306 (317)
T TIGR01181 232 KGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDR-----PGHDRRYAIDASKIKRELGWAPKYTFEEGLRKT 306 (317)
T ss_pred CCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCC-----ccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHH
Confidence 764 46999999999999999999999998643322111100 000012357999998765554 5899999999
Q ss_pred hhccCC
Q 005818 662 VFEPNK 667 (676)
Q Consensus 662 ~~~~~~ 667 (676)
+..+.+
T Consensus 307 ~~~~~~ 312 (317)
T TIGR01181 307 VQWYLD 312 (317)
T ss_pred HHHHHh
Confidence 876654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=254.35 Aligned_cols=279 Identities=15% Similarity=0.090 Sum_probs=198.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc----cCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL----KNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~----~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
+++|||||||||||+++++.|+++ +++|+++.|+...... ..+ .....+++++.+|++|.+.+.+++ .++
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l--~~~~~~~~~~~~Dl~d~~~~~~~l--~~~ 79 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGL--SCEEERLKVFDVDPLDYHSILDAL--KGC 79 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhc--ccCCCceEEEEecCCCHHHHHHHH--cCC
Confidence 578999999999999999999999 6788877774321111 111 111346899999999999999998 789
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCC--CCCCcCCCCCCCCCCCC----
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGE--TDEDAVVGNHEASQLLP---- 156 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~--~~~~~~~~~~e~~~~~p---- 156 (676)
|+|+|+++..... ..++...+++|+.|+.+++++|.+...+++||++||.+++.. .........+|+.+..+
T Consensus 80 d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~ 157 (297)
T PLN02583 80 SGLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR 157 (297)
T ss_pred CEEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh
Confidence 9999987654321 124567899999999999999987644789999999876531 11111122344433221
Q ss_pred --CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 157 --TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 157 --~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
..+|+.+|..+|++++.++++++++++++||++||||+..+.. . ...+. .....+ ..+.||||+|+|+
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--~-----~~~~~-~~~~~~--~~~~~v~V~Dva~ 227 (297)
T PLN02583 158 KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--P-----YLKGA-AQMYEN--GVLVTVDVNFLVD 227 (297)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--h-----hhcCC-cccCcc--cCcceEEHHHHHH
Confidence 2379999999999999998888999999999999999864321 1 12222 122222 3457999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcc
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYE 305 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~ 305 (676)
+++.+++.+..++.|+++++....+.++.+.+.+.++..+-.. .. ...........++++|+++||++.
T Consensus 228 a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~-~~~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 228 AHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP-PY-EMQGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred HHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCC-cc-cccCCCccccccChHHHHHhCccc
Confidence 9999999887777898887765667889999998876432111 00 111112345678999999999874
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=267.69 Aligned_cols=267 Identities=15% Similarity=0.149 Sum_probs=195.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
|+|||||||||||++|+++|+++|++| .++.+|++|++.+.++++++ |+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGC--EGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCC--CEEEE
Confidence 589999999999999999999999865 23457899999999999876 99999
Q ss_pred CccccCCCCcchhccchh-hHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCe--eeecCCCCCCCCCCCccccCCCCCC-
Q 005818 439 AAGVTGRPNVDWCETHKP-ETIRTNVVGTLTLADVCREN-GL-LMMNYATGC--IFEYDAKHPEGTGIGFKEEDKPNFT- 512 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~--v~~~~~~~~~~~~~~~~~e~~~~~p- 512 (676)
+|+.. . ....++. .++++|+.|+.+++++|++. ++ ++|++||.. +|++....+ .. +.+|+.+..|
T Consensus 83 ~A~~~---~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~---~~-~~~E~~~~~p~ 153 (322)
T PLN02662 83 TASPF---Y--HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTP---DV-VVDETWFSDPA 153 (322)
T ss_pred eCCcc---c--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCC---CC-cCCcccCCChh
Confidence 99964 1 1233454 77899999999999999987 77 566666654 354321111 11 2444444433
Q ss_pred -----CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------HHHHHHHhcCcee-ccCCCccchhhHHH
Q 005818 513 -----GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NFITKISRYNKVV-NIPNSMTILDELLP 577 (676)
Q Consensus 513 -----~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~-~~~~~~~~v~D~a~ 577 (676)
.+.|+.+|.++|++++.+.+..+++++++|++++|||. .++.+++.+.... ....+|+||+|+|+
T Consensus 154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 233 (322)
T PLN02662 154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVAN 233 (322)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHH
Confidence 35899999999999998877789999999999999985 1234444443221 22348999999999
Q ss_pred HHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCCCHHH
Q 005818 578 ISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKE 656 (676)
Q Consensus 578 ~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~~~~~ 656 (676)
+++.+++.+ ..|.||++ ++.+|+.|+++.+.+.++.. . ++...... ........+|++|+++++|.+.++++
T Consensus 234 a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~-~---~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~~~~~~ 306 (322)
T PLN02662 234 AHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL-Q---LPEKCADD--KPYVPTYQVSKEKAKSLGIEFIPLEV 306 (322)
T ss_pred HHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC-C---CCCCCCCc--cccccccccChHHHHHhCCccccHHH
Confidence 999999876 45799997 57899999999999987631 1 11100000 01112456899999987666578999
Q ss_pred HHHHhhhccCCCC
Q 005818 657 SLIKNVFEPNKKP 669 (676)
Q Consensus 657 ~l~~~~~~~~~~~ 669 (676)
+|++++..+.++.
T Consensus 307 ~l~~~~~~~~~~~ 319 (322)
T PLN02662 307 SLKDTVESLKEKG 319 (322)
T ss_pred HHHHHHHHHHHcC
Confidence 9999998876653
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=268.22 Aligned_cols=267 Identities=17% Similarity=0.185 Sum_probs=201.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|||+||||+||||++|++.|+++|++|. ++.+|++|.+.+.++++..++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 5899999999999999999999998762 345899999999988886567999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCC-CCCCchh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN-FTGSFYS 517 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~-~p~~~Y~ 517 (676)
|+.. .......++...+++|+.++.+++++|++.++ ++|++||+.+|+.....+ .+|+.+. .|.+.|+
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~-------~~E~~~~~~p~~~Y~ 150 (338)
T PRK10675 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIP-------YVESFPTGTPQSPYG 150 (338)
T ss_pred Cccc---cccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCc-------cccccCCCCCCChhH
Confidence 9965 23223445667899999999999999999987 577778888887543333 4555554 6778999
Q ss_pred hhHHHHHHHHHHccCe-EEEEeeecccCCCCChH-----------------HHHHHHHhcCc-ee-cc--------C---
Q 005818 518 KTKAMVEELLKEYDNV-CTLRVRMPISSDLNNPR-----------------NFITKISRYNK-VV-NI--------P--- 566 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~-~~l~~~~~r~~~~~g~~-----------------~~~~~~~~~~~-~~-~~--------~--- 566 (676)
.+|..+|++++.+.+. .+++++++|++++|||. .++.++..+.. .+ .. +
T Consensus 151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (338)
T PRK10675 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230 (338)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence 9999999999987543 47889999988888752 12333443321 11 11 1
Q ss_pred CCccchhhHHHHHHHHHhcC---C-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChh
Q 005818 567 NSMTILDELLPISVEMAKRN---L-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 642 (676)
.+|+|++|+|++++.+++.. . .++||+++++.+|+.|+++.+.+.+|.+..+...+... .......+|++
T Consensus 231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------~~~~~~~~~~~ 304 (338)
T PRK10675 231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRRE------GDLPAYWADAS 304 (338)
T ss_pred EeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCC------CchhhhhcCHH
Confidence 28999999999999998752 2 36999999999999999999999999765543322111 01114457999
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
|+++.++|. .+++++|++++..+.+
T Consensus 305 k~~~~lg~~p~~~~~~~~~~~~~~~~~ 331 (338)
T PRK10675 305 KADRELNWRVTRTLDEMAQDTWHWQSR 331 (338)
T ss_pred HHHHHhCCCCcCcHHHHHHHHHHHHHh
Confidence 998776665 5899999999877655
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=271.75 Aligned_cols=266 Identities=24% Similarity=0.276 Sum_probs=201.5
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCcccccc-CC----CC----------------CCCCCCe
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSNLK-NL----NP----------------SRLSPNF 60 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~-~~----~~----------------~~~~~~v 60 (676)
+++..++|||||||||||++|++.|++.++.+ +|+++.|........ ++ .. .....++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 45678999999999999999999999875554 788888865432110 00 00 0012579
Q ss_pred EEEEecCC-------CHHHHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 61 KFIKGDVA-------SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 61 ~~v~~Dl~-------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
+++.||++ +.+.+..++ .++|+|||+|+..... .++....+.|+.|+.+|+++|+..+.+++|||+||
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~--~~vD~ViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMW--KEIDIVVNLAATTNFD---ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHH--hCCCEEEECccccCCc---CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 99999998 445566676 6799999999987643 46778899999999999999998655899999999
Q ss_pred ccccCCCCCCcCC---C--C----------C-------------------C-------------C-CCCCCCChhHHHHH
Q 005818 134 DEVYGETDEDAVV---G--N----------H-------------------E-------------A-SQLLPTNPYSATKA 165 (676)
Q Consensus 134 ~~vyg~~~~~~~~---~--~----------~-------------------e-------------~-~~~~p~~~Y~~sK~ 165 (676)
+.|||...+...+ + . + + . ....+.+.|+.||.
T Consensus 162 ~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~ 241 (491)
T PLN02996 162 AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA 241 (491)
T ss_pred eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence 9999875431100 0 0 0 0 0 01224467999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-C------hHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-K------LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
.+|.++++++. ++|++++||++|||+...+. . ....++..+..|....+++++++.++++||+|++++++.
T Consensus 242 ~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~ 319 (491)
T PLN02996 242 MGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV 319 (491)
T ss_pred HHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence 99999988753 89999999999999987542 1 223455555667766788999999999999999999999
Q ss_pred HHhcC----CCCceEEEcCC--CcccHHHHHHHHHHHhCCCCC
Q 005818 239 ILHKG----EVGHVYNIGTK--KERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 239 ~~~~~----~~~~~y~i~~~--~~~s~~el~~~i~~~~g~~~~ 275 (676)
++.+. ..+++||++++ .++|+.++.+.+.+.++..|.
T Consensus 320 a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 320 AMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred HHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 88652 23578999998 889999999999998876553
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=261.51 Aligned_cols=268 Identities=15% Similarity=0.185 Sum_probs=194.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
++|+||||+||||++|+++|+++|++| .++.+|++|++.+.++++++ |+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC--DAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC--CEEEE
Confidence 689999999999999999999999865 23457899999999999876 99999
Q ss_pred CccccCCCCcchhccchh-hHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecCCCCCCCCCCCccccCCCC-----
Q 005818 439 AAGVTGRPNVDWCETHKP-ETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN----- 510 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~----- 510 (676)
+|+.. .. ...++. ..+++|+.|+.+++++|++. ++ ++|++||+.+|..... +...+. ..+|+.+.
T Consensus 84 ~A~~~---~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~-~~~~~~-~~~E~~~~~p~~~ 156 (322)
T PLN02986 84 TASPV---FF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQP-PIEAND-VVDETFFSDPSLC 156 (322)
T ss_pred eCCCc---CC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCc-cCCCCC-CcCcccCCChHHh
Confidence 99964 11 123333 56899999999999999986 66 6777777766532111 000011 23344332
Q ss_pred -CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------HHHHHHHhcCcee-ccCCCccchhhHHHHH
Q 005818 511 -FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NFITKISRYNKVV-NIPNSMTILDELLPIS 579 (676)
Q Consensus 511 -~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~-~~~~~~~~v~D~a~~~ 579 (676)
.+.+.|+.||..+|++++.+.+.++++++++||+++|||. .++..++.+.... ....+|+||+|+|+++
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~ 236 (322)
T PLN02986 157 RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAH 236 (322)
T ss_pred hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHH
Confidence 2357899999999999999877779999999999999985 2344455554321 1223899999999999
Q ss_pred HHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCCCHHHHH
Q 005818 580 VEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESL 658 (676)
Q Consensus 580 ~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~~~~~~l 658 (676)
+.+++++ ..|.||++ ++.+|+.|+++.+++.++. ..+ +.... .. ........+|++|++++++.+.+++++|
T Consensus 237 ~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~---~~~~~-~~-~~~~~~~~~d~~~~~~lg~~~~~l~e~~ 309 (322)
T PLN02986 237 IKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCI---ADTNE-ES-EMNEMICKVCVEKVKNLGVEFTPMKSSL 309 (322)
T ss_pred HHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCC---CCCCc-cc-cccccCCccCHHHHHHcCCcccCHHHHH
Confidence 9999876 45799995 5689999999999999873 221 11100 00 0111123589999988777667899999
Q ss_pred HHhhhccCCC
Q 005818 659 IKNVFEPNKK 668 (676)
Q Consensus 659 ~~~~~~~~~~ 668 (676)
++++..+.++
T Consensus 310 ~~~~~~~~~~ 319 (322)
T PLN02986 310 RDTILSLKEK 319 (322)
T ss_pred HHHHHHHHHc
Confidence 9999876653
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-30 Score=263.07 Aligned_cols=268 Identities=16% Similarity=0.186 Sum_probs=194.0
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
..+|+|+||||+||||++|+++|+++|++| .++.+|++|++.+.++++++ |+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGC--DLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcC--CEE
Confidence 345789999999999999999999999765 23567999999999988876 999
Q ss_pred EECccccCCCCcchhccchh-hHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecCCCCCCCCCCCccccC------
Q 005818 437 FNAAGVTGRPNVDWCETHKP-ETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYDAKHPEGTGIGFKEED------ 507 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~------ 507 (676)
||+|+.. . ....++. .++++|+.|+.+++++|++. ++ ++|++||..+|+..... +.+.+..|+.
T Consensus 85 ih~A~~~---~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~--~~~~~~~E~~~~~~~~ 157 (338)
T PLN00198 85 FHVATPV---N--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLS--GTGLVMNEKNWTDVEF 157 (338)
T ss_pred EEeCCCC---c--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCC--CCCceeccccCCchhh
Confidence 9999954 1 1123343 46799999999999999886 45 67888888888743210 0011111211
Q ss_pred --CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH---------HHHHHHhcCceeccC----------
Q 005818 508 --KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------FITKISRYNKVVNIP---------- 566 (676)
Q Consensus 508 --~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~---------- 566 (676)
.+..|.++|+.||.++|++++.+.+.++++++++|++++|||+. ++..++.++.....+
T Consensus 158 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 237 (338)
T PLN00198 158 LTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGS 237 (338)
T ss_pred hhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCC
Confidence 23356788999999999999998777899999999999999961 223344443322111
Q ss_pred CCccchhhHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHH
Q 005818 567 NSMTILDELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKL 644 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~ 644 (676)
.+|+||+|+|++++.+++.+. .|.|+ ++++.+|+.|+++.+.+.++. +.+.. .. .. .......+|++|+
T Consensus 238 ~~~i~V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~-~~--~~-----~~~~~~~~~~~k~ 308 (338)
T PLN00198 238 ISITHVEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQVPTD-FG--DF-----PSKAKLIISSEKL 308 (338)
T ss_pred cceeEHHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCCCCcc-cc--cc-----CCCCccccChHHH
Confidence 389999999999999998763 46885 556789999999999998763 22111 00 00 0112345799999
Q ss_pred HhhCCCC-CCHHHHHHHhhhccCC
Q 005818 645 KKEFPEL-LSIKESLIKNVFEPNK 667 (676)
Q Consensus 645 ~~~~~~~-~~~~~~l~~~~~~~~~ 667 (676)
++++|.+ .+++++|++++..+.+
T Consensus 309 ~~~G~~p~~~l~~gi~~~~~~~~~ 332 (338)
T PLN00198 309 ISEGFSFEYGIEEIYDQTVEYFKA 332 (338)
T ss_pred HhCCceecCcHHHHHHHHHHHHHH
Confidence 9885555 5999999999877654
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=252.50 Aligned_cols=221 Identities=18% Similarity=0.215 Sum_probs=169.7
Q ss_pred EEEcCCcchhHHHHHHHHHcC--Cce---------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 388 LIYGRTGWIGGLLSKICEKKG--IPF---------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 388 litG~~G~iG~~l~~~L~~~g--~~v---------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
|||||+||||++|+++|+++| ++| .++.+|++|++++.++++++ |+|||+|++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~--d~V~H~Aa~~- 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGV--DVVFHTAAPV- 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCC--ceEEEeCccc-
Confidence 699999999999999999999 433 37899999999999999999 9999999976
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCC-CCCCCCCCCccccCCC--CCCCCchhhhH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDA-KHPEGTGIGFKEEDKP--NFTGSFYSKTK 520 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~-~~~~~~~~~~~~e~~~--~~p~~~Y~~sK 520 (676)
... .....+.++++||.||.||+++|++.+++ +||.||..+++... ..+.. -.+|+.| ..+.+.|+.||
T Consensus 78 --~~~-~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~----~~dE~~~~~~~~~~~Y~~SK 150 (280)
T PF01073_consen 78 --PPW-GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPII----NGDEDTPYPSSPLDPYAESK 150 (280)
T ss_pred --ccc-CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcc----cCCcCCcccccccCchHHHH
Confidence 221 13456688999999999999999999986 55666667776421 11100 0233333 23567899999
Q ss_pred HHHHHHHHHccC-----eEEEEeeecccCCCCChHH-----HHHHHHhcC-ceeccCC-----CccchhhHHHHHHHHHh
Q 005818 521 AMVEELLKEYDN-----VCTLRVRMPISSDLNNPRN-----FITKISRYN-KVVNIPN-----SMTILDELLPISVEMAK 584 (676)
Q Consensus 521 ~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~-----~~~~~~~~~-~~~~~~~-----~~~~v~D~a~~~~~~~~ 584 (676)
.+||++++++.. ...++++++||..+|||+. .+..+.+.. ..+..++ +++||+|+|.+++.+++
T Consensus 151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~ 230 (280)
T PF01073_consen 151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ 230 (280)
T ss_pred HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence 999999999754 2369999999999999972 233333333 3333332 89999999999998875
Q ss_pred c---C------CCceeEccCCCccc-HHHHHHHHHhhcCCCCcc
Q 005818 585 R---N------LSGIWNFTNPGVVS-HNEILEMYKAYIDPGFKW 618 (676)
Q Consensus 585 ~---~------~~g~yn~~~~~~~s-~~e~~~~i~~~~g~~~~~ 618 (676)
. + .++.|++++++++. +.||...+.+.+|.+.+.
T Consensus 231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 3 2 23599999999999 999999999999987554
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=261.89 Aligned_cols=265 Identities=16% Similarity=0.199 Sum_probs=190.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
++||||||+||||++|+++|+++|++| .++.+|++|.+.++++++++ |+|||
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--d~ViH 83 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGC--TGVFH 83 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCC--CEEEE
Confidence 589999999999999999999999765 23568999999999999876 99999
Q ss_pred CccccCCCCcchhccch-hhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCC-CCCCCCCCccccC-------
Q 005818 439 AAGVTGRPNVDWCETHK-PETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAK-HPEGTGIGFKEED------- 507 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~-~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~-~~~~~~~~~~~e~------- 507 (676)
+|+.. . ....++ ...+++|+.|+.+++++|++.+ + ++|++||..+|+.... .| .+.|+.
T Consensus 84 ~A~~~---~--~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~-----~~~E~~~~~~~~~ 153 (351)
T PLN02650 84 VATPM---D--FESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP-----VYDEDCWSDLDFC 153 (351)
T ss_pred eCCCC---C--CCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCC-----ccCcccCCchhhh
Confidence 99854 2 112234 3678999999999999999976 5 6777788767754221 11 012221
Q ss_pred -CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH-------HHHHH--HhcCce-ec--cCCCccchhh
Q 005818 508 -KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKI--SRYNKV-VN--IPNSMTILDE 574 (676)
Q Consensus 508 -~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~--~~~~~~-~~--~~~~~~~v~D 574 (676)
.+..|.++|+.||..+|++++.+.+.++++++++||+++|||.. ++..+ ..+... .. ...+|+||+|
T Consensus 154 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~D 233 (351)
T PLN02650 154 RRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDD 233 (351)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHH
Confidence 12234568999999999999998777899999999999999951 33222 122211 11 1138999999
Q ss_pred HHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-C
Q 005818 575 LLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-L 652 (676)
Q Consensus 575 ~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~ 652 (676)
+|++++.+++++. .|.| +++++++|+.|+++.+.+.++.. .+ +...... ........+|++|+++++|.+ .
T Consensus 234 va~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~-~~-~~~~~~~----~~~~~~~~~d~~k~~~lG~~p~~ 306 (351)
T PLN02650 234 LCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEY-NI-PARFPGI----DEDLKSVEFSSKKLTDLGFTFKY 306 (351)
T ss_pred HHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCccc-CC-CCCCCCc----CcccccccCChHHHHHhCCCCCC
Confidence 9999999998763 4789 55668899999999999987631 11 1110000 001113456999998777666 4
Q ss_pred CHHHHHHHhhhccCCC
Q 005818 653 SIKESLIKNVFEPNKK 668 (676)
Q Consensus 653 ~~~~~l~~~~~~~~~~ 668 (676)
+|+++|++++..+.+.
T Consensus 307 ~l~egl~~~i~~~~~~ 322 (351)
T PLN02650 307 SLEDMFDGAIETCREK 322 (351)
T ss_pred CHHHHHHHHHHHHHHc
Confidence 8999999998876553
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=258.54 Aligned_cols=269 Identities=20% Similarity=0.234 Sum_probs=201.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
|+|||||||||||++|+++|+++||+| .++.+|++|.+.+.++++.++ |+|||+|+..+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~aa~~~--- 76 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVP-DAVIHLAAQSS--- 76 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCC-CEEEEccccCc---
Confidence 359999999999999999999999876 245678888877777777755 99999999773
Q ss_pred cchhcc-chhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC-eeeecCCCCCCCCCCCccccC-CCCCCCCchhhhHHHHH
Q 005818 448 VDWCET-HKPETIRTNVVGTLTLADVCRENGLLMMNYATG-CIFEYDAKHPEGTGIGFKEED-KPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 448 ~~~~~~-~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~-~~~~p~~~Y~~sK~~~E 524 (676)
...... ++..++++|+.++.+++++|++.+++.++++|+ .+|+..... . ..+|+ .+..|.+.|+.||+++|
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~-----~-~~~E~~~~~~p~~~Yg~sK~~~E 150 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPP-----L-PIDEDLGPPRPLNPYGVSKLAAE 150 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCC-----C-CcccccCCCCCCCHHHHHHHHHH
Confidence 222222 466789999999999999999988765555555 556544111 1 24555 57777779999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChHH-------HH----HHHHhcCceeccC------CCccchhhHHHHHHHHHhcCC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPRN-------FI----TKISRYNKVVNIP------NSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~----~~~~~~~~~~~~~------~~~~~v~D~a~~~~~~~~~~~ 587 (676)
++++.+.+..+++++++|++++|||.. +. .++..+.+..... .+++|++|++++++.+++++.
T Consensus 151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 230 (314)
T COG0451 151 QLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230 (314)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC
Confidence 999998767889999999999999961 22 2244444422222 168999999999999999875
Q ss_pred CceeEccCCC-cccHHHHHHHHHhhcCCCCcc-cccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhh
Q 005818 588 SGIWNFTNPG-VVSHNEILEMYKAYIDPGFKW-TNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVF 663 (676)
Q Consensus 588 ~g~yn~~~~~-~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~ 663 (676)
.+.||+++++ .+++.|+++.+.+.+|..... ...+. ...........+|++|++..++|. .++++++.+++.
T Consensus 231 ~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~ 306 (314)
T COG0451 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL----GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLE 306 (314)
T ss_pred CcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC----CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 5599999997 999999999999999977552 21111 001111125578999998766665 479999999876
Q ss_pred ccCC
Q 005818 664 EPNK 667 (676)
Q Consensus 664 ~~~~ 667 (676)
.+..
T Consensus 307 ~~~~ 310 (314)
T COG0451 307 WLLK 310 (314)
T ss_pred HHHH
Confidence 5443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=268.92 Aligned_cols=255 Identities=19% Similarity=0.210 Sum_probs=193.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||+++++.|+++ +++|++++|..... ...+++++.+|+.|.+.+.+++ .++|+|||
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al--~~vD~VVH 67 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS---------WPSSADFIAADIRDATAVESAM--TGADVVAH 67 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh---------cccCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 47999999999999999999999 67888888853110 1236889999999999999988 67999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+.... ..+.|+.++.+++++|++.+ +++|||+||.. |..+
T Consensus 68 lAa~~~~---------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------K~aa 109 (854)
T PRK05865 68 CAWVRGR---------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------QPRV 109 (854)
T ss_pred CCCcccc---------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------HHHH
Confidence 9986431 45789999999999999987 88999999942 7888
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC-CCC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG-EVG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~-~~~ 246 (676)
|+++. +++++++++||+++|||+. . .++..+.. .++...+++.+.++|+|++|++++++.+++++ ..+
T Consensus 110 E~ll~----~~gl~~vILRp~~VYGP~~--~----~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~g 178 (854)
T PRK05865 110 EQMLA----DCGLEWVAVRCALIFGRNV--D----NWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDS 178 (854)
T ss_pred HHHHH----HcCCCEEEEEeceEeCCCh--H----HHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCC
Confidence 88764 3589999999999999973 1 22222221 22222345566789999999999999998654 356
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceeeecCC--CCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSL-NPDTQIKFVENR--PFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~--~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
++||+++++.+|+.|+++.+.+.... ..+......... ........+|++|+++ |||+|+++++++|+++++||+.
T Consensus 179 gvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ 258 (854)
T PRK05865 179 GPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRG 258 (854)
T ss_pred CeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 79999999999999999988875321 110000000000 1111234689999985 9999999999999999999997
Q ss_pred CC
Q 005818 323 NP 324 (676)
Q Consensus 323 ~~ 324 (676)
+.
T Consensus 259 ri 260 (854)
T PRK05865 259 RI 260 (854)
T ss_pred hc
Confidence 64
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=243.50 Aligned_cols=254 Identities=30% Similarity=0.396 Sum_probs=187.6
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCe----EEEEecCCCHHHHHHHHccCCCC
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNF----KFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v----~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
||||||+|.||+.||++|++.++ .+++++|++...-- .+.+......+++ ..+.+|++|.+.+.++++..++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 79999999999999999999964 68888998753211 1111111112334 34689999999999999777999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|||+||.-+....+.+|.+.+.+|+.||.|++++|.+++ +++||++||+.. .+|.+.||+|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA-----------------v~PtnvmGat 141 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA-----------------VNPTNVMGAT 141 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-----------------SS--SHHHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc-----------------CCCCcHHHHH
Confidence 9999999999989999999999999999999999999998 999999999654 3567889999
Q ss_pred HHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 164 K~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~ 240 (676)
|..+|.++..+.... +..++++|+|+|.|... +.++.|.+++.+|+++++ .+++..|-|+.++++++.++.+.
T Consensus 142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G---SVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~ 217 (293)
T PF02719_consen 142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG---SVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAA 217 (293)
T ss_dssp HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT---SCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC---cHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHH
Confidence 999999999887655 57899999999999876 799999999999999887 55778899999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCC----CcceeeecCCCC
Q 005818 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNP----DTQIKFVENRPF 286 (676)
Q Consensus 241 ~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~~~~~~ 286 (676)
.....+++|.+-.|+++++.|+++.+.+..|..+ ...+.+...+|.
T Consensus 218 ~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRpG 267 (293)
T PF02719_consen 218 ALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLRPG 267 (293)
T ss_dssp HH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----TT
T ss_pred hhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCCCC
Confidence 8877889999999999999999999999998643 334444444443
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=260.07 Aligned_cols=269 Identities=15% Similarity=0.193 Sum_probs=191.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.|+||||||+||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+|||+|
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vih~A 87 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGC--DGVFHVA 87 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCC--CEEEECC
Confidence 4789999999999999999999999765 25678999999999988865 9999999
Q ss_pred cccCCCCcch--hccchhhH-----HhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCC--C
Q 005818 441 GVTGRPNVDW--CETHKPET-----IRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK--P 509 (676)
Q Consensus 441 ~~~~~~~~~~--~~~~~~~~-----~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~--~ 509 (676)
+.. .... ...+++.. ++.|+.|+.+++++|++.+ + ++|++||+.+|+..... +......+|+. |
T Consensus 88 ~~~---~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~~~E~~~~p 162 (353)
T PLN02896 88 ASM---EFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSN--GRWRAVVDETCQTP 162 (353)
T ss_pred ccc---cCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccC--CCCCCccCcccCCc
Confidence 976 2221 23344444 3455699999999998875 5 67888888999753210 00001133331 1
Q ss_pred -------CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------HHHHHHH---hcCcee-cc-------
Q 005818 510 -------NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------NFITKIS---RYNKVV-NI------- 565 (676)
Q Consensus 510 -------~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------~~~~~~~---~~~~~~-~~------- 565 (676)
..+.++|+.||+++|++++.+.+.++++++++|++++|||+ .++..++ .+.... ..
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 242 (353)
T PLN02896 163 IDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSR 242 (353)
T ss_pred HHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccc
Confidence 12446899999999999999877789999999999999995 2333333 232211 00
Q ss_pred --CCCccchhhHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCC-CcccccchHhhhhHhccCCCccccCh
Q 005818 566 --PNSMTILDELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPG-FKWTNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 566 --~~~~~~v~D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
..+|+||+|+|++++.+++.+. .+.|++ +++++|+.|+++.+++.++.. ..+ .+... ..... ...+|+
T Consensus 243 ~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~-~~~~~-----~~~~~-~~~~~~ 314 (353)
T PLN02896 243 MGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQV-RLDEE-----KRGSI-PSEISS 314 (353)
T ss_pred cCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccc-ccccc-----ccCcc-ccccCH
Confidence 1289999999999999998753 468865 568899999999999998732 111 11110 01101 234689
Q ss_pred hHHHhhCCCC-CCHHHHHHHhhhccCC
Q 005818 642 SKLKKEFPEL-LSIKESLIKNVFEPNK 667 (676)
Q Consensus 642 ~k~~~~~~~~-~~~~~~l~~~~~~~~~ 667 (676)
+|+++++|.+ .+|+++|++++..+.+
T Consensus 315 ~~~~~lGw~p~~~l~~~i~~~~~~~~~ 341 (353)
T PLN02896 315 KKLRDLGFEYKYGIEEIIDQTIDCCVD 341 (353)
T ss_pred HHHHHcCCCccCCHHHHHHHHHHHHHH
Confidence 9998866655 4899999999877655
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-28 Score=241.63 Aligned_cols=274 Identities=16% Similarity=0.106 Sum_probs=196.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+.|+||||||+||||++|++.|+++ +++|+... +|+.|.+.+...+...++|+|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~------------------------~~~~~~~~v~~~l~~~~~D~V 61 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGS------------------------GRLENRASLEADIDAVKPTHV 61 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEec------------------------CccCCHHHHHHHHHhcCCCEE
Confidence 3579999999999999999999999 55665321 345667777777766689999
Q ss_pred EEccccCCcC---CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCc---CCCCCCCCCC-CCCC
Q 005818 86 MHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA---VVGNHEASQL-LPTN 158 (676)
Q Consensus 86 ih~a~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~---~~~~~e~~~~-~p~~ 158 (676)
||+|+..... .+..++...++.|+.++.+|+++|++.+ ++ ++++||.++|+.....+ ..+..|++++ .|.+
T Consensus 62 iH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s 139 (298)
T PLN02778 62 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGS 139 (298)
T ss_pred EECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCC
Confidence 9999987532 2446788999999999999999999987 64 67778888887533111 1123444444 4568
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
+|+.+|..+|.+++.|++ ..++|++..+|++.. ....++..+..+..+...+ .+++|++|++++++.
T Consensus 140 ~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~---~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~ 206 (298)
T PLN02778 140 FYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS---NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIE 206 (298)
T ss_pred chHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc---cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHH
Confidence 999999999999988763 468898888887532 2234567777776654433 279999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC-cceeeecCC---CCCCcccccCHHHHHh-CCCcccCCHHHHH
Q 005818 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPD-TQIKFVENR---PFNDQRYFLDVQKLKQ-LGWYERVTWEEGL 313 (676)
Q Consensus 239 ~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~---~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l 313 (676)
++++.. +++||+++++++|+.|+++.+++.++.+.. ..+...+.. .....+..+|.+|+++ ++-.+. ..++++
T Consensus 207 ~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~ 284 (298)
T PLN02778 207 MAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLI 284 (298)
T ss_pred HHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHH
Confidence 997654 469999999999999999999999986422 111111110 0112233689999987 444333 667888
Q ss_pred HHHHHHHhh
Q 005818 314 QKTMKWYIS 322 (676)
Q Consensus 314 ~~~~~~~~~ 322 (676)
+..++.++.
T Consensus 285 ~~~~~~~~~ 293 (298)
T PLN02778 285 KYVFEPNKK 293 (298)
T ss_pred HHHHHHHHh
Confidence 777766643
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=249.76 Aligned_cols=280 Identities=19% Similarity=0.170 Sum_probs=197.2
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEcc
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFA 89 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a 89 (676)
|||||||||||+++++.|+++ +++|++++|....... .. ... ..|+.. ..+.+.+ .++|+|||+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~--~~----~~~----~~~~~~-~~~~~~~--~~~D~Vvh~a 65 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGAN--TK----WEG----YKPWAP-LAESEAL--EGADAVINLA 65 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCc--cc----cee----eecccc-cchhhhc--CCCCEEEECC
Confidence 699999999999999999999 6889998886532211 00 001 112222 3334444 6899999999
Q ss_pred ccCCcCC--cCCChHHHHHHHHHHHHHHHHHHHHcCCC--ceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 90 AQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKITGQI--KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 90 ~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~--~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
+...... ....+..+.+.|+.++.+++++|++.+ + .+||++||.++||.....+. .|+.+..+.+.|+..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~---~E~~~~~~~~~~~~~~~ 141 (292)
T TIGR01777 66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVF---TEEDSPAGDDFLAELCR 141 (292)
T ss_pred CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCc---CcccCCCCCChHHHHHH
Confidence 9755322 222445678899999999999999987 4 36777788889987654433 55555556666777777
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
..|..+... ++.+++++++||+.+|||+. ..+..+.......... .++++++.++++|++|+++++..+++++..
T Consensus 142 ~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~ 216 (292)
T TIGR01777 142 DWEEAAQAA-EDLGTRVVLLRTGIVLGPKG---GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIEDLVQLILFALENASI 216 (292)
T ss_pred HHHHHhhhc-hhcCCceEEEeeeeEECCCc---chhHHHHHHHhcCccc-ccCCCCcccccEeHHHHHHHHHHHhcCccc
Confidence 777776643 44689999999999999975 2334443333222111 246788999999999999999999988666
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec------CCCC-CCcccccCHHHHHhCCCcccC-CHHHHH
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE------NRPF-NDQRYFLDVQKLKQLGWYERV-TWEEGL 313 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~------~~~~-~~~~~~~~~~k~~~lg~~~~~-~~~~~l 313 (676)
.++||+++++++|+.|+++.+++.+|.+....++... ..+. ......++.+|++++||+|++ ++++++
T Consensus 217 ~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 217 SGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred CCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 7899999999999999999999999875432211100 0010 123455788999999999999 587753
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=244.95 Aligned_cols=259 Identities=28% Similarity=0.380 Sum_probs=220.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
+..+|+||||||+|-||+.+|+++++.+ --+++..+++....- ...+........+.++-||++|.+.+.+++...+
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~-p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFN-PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcC-CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 4568999999999999999999999996 447778888653321 1112222224678899999999999999998788
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|+|+|+||.-+...++.+|.+.+.+||.||.|++++|.+.+ +++||++||+.. .+|.|.||
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKA-----------------V~PtNvmG 387 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKA-----------------VNPTNVMG 387 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcc-----------------cCCchHhh
Confidence 999999999999999999999999999999999999999998 999999999643 56788999
Q ss_pred HHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
++|..+|..+..+..+. +..++++|+|+|.|... +.+|.+.+++.+|+++++ .+++-.|-|..+.|+++.++.
T Consensus 388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG---SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlq 463 (588)
T COG1086 388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQ 463 (588)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC---CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHH
Confidence 99999999999887643 38899999999999976 799999999999998887 678889999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc--ceeeecCCC
Q 005818 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT--QIKFVENRP 285 (676)
Q Consensus 239 ~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~--~~~~~~~~~ 285 (676)
+......|++|-+-.|+++++.|+++.+.+..|..+.. .+.+...+|
T Consensus 464 A~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRp 512 (588)
T COG1086 464 AGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRP 512 (588)
T ss_pred HHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCC
Confidence 99888889999999999999999999999999854432 344444444
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=252.24 Aligned_cols=270 Identities=17% Similarity=0.177 Sum_probs=202.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|+|+||||+||||++|++.|+++|++| .++.+|+.|.+++.++++++ |+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--d~vi~~a~~~--- 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGC--RALFHVAADY--- 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCC--CEEEEeceec---
Confidence 479999999999999999999999765 45678999999999999877 9999999843
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC---CCchhhhHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT---GSFYSKTKAM 522 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p---~~~Y~~sK~~ 522 (676)
.....+++..+++|+.++.+++++|++.++ ++|++||+.+|+.... +.+ .+|+.+..| .+.|+.+|..
T Consensus 76 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~-----~~~-~~e~~~~~~~~~~~~Y~~sK~~ 147 (328)
T TIGR03466 76 --RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD-----GTP-ADETTPSSLDDMIGHYKRSKFL 147 (328)
T ss_pred --ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC-----CCC-cCccCCCCcccccChHHHHHHH
Confidence 122345678899999999999999999886 6788888888874221 111 344444443 4679999999
Q ss_pred HHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCce--eccCCCccchhhHHHHHHHHHhcCCCc-ee
Q 005818 523 VEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKV--VNIPNSMTILDELLPISVEMAKRNLSG-IW 591 (676)
Q Consensus 523 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~--~~~~~~~~~v~D~a~~~~~~~~~~~~g-~y 591 (676)
+|++++.+.+..+++++++|++++|||+. ++...+.+... ...+.+|+|++|+|++++.+++++..| .|
T Consensus 148 ~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~ 227 (328)
T TIGR03466 148 AEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERY 227 (328)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceE
Confidence 99999998666789999999999999852 23333332221 122338999999999999999876544 78
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhh----------H-hccC----------CCccccChhHHHhhCCC
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAK----------V-IVAP----------RSNNELDASKLKKEFPE 650 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~----------~-~~~~----------~~~~~ld~~k~~~~~~~ 650 (676)
|++ ++++|+.|+++.+.+.+|.+.....++...... . ...+ ..+..+|++|+++.++|
T Consensus 228 ~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~ 306 (328)
T TIGR03466 228 ILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGY 306 (328)
T ss_pred Eec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCC
Confidence 775 689999999999999999876655555321100 0 0011 01456799999887776
Q ss_pred C-CCHHHHHHHhhhccCCC
Q 005818 651 L-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 651 ~-~~~~~~l~~~~~~~~~~ 668 (676)
. .+++++|++++..+.+.
T Consensus 307 ~p~~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 307 RQRPAREALRDAVEWFRAN 325 (328)
T ss_pred CCcCHHHHHHHHHHHHHHh
Confidence 6 69999999998776553
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-26 Score=251.17 Aligned_cols=435 Identities=16% Similarity=0.160 Sum_probs=284.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.+.+++|||||++.||.++++.|+++ +++|++++|..... ..+. .....++..+++|++|++++.+++..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERA--RERA-DSLGPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH-HHhCCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999 67888888754211 1111 11134577899999999998887743
Q ss_pred CCCCEEEEccccCC------cCCcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 EKIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 ~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||... .+.+.+++...++.|+.++..+.+++... +.-.++|++||...+....+
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~------- 150 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK------- 150 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-------
Confidence 36999999998732 12344567789999999999999877643 21238999999655433221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHH-HHHHHCCCCceeecCCCceEe
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKF-ILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+++.++.+ .+++++.+.||.|..+......-.... ....... ++. ..
T Consensus 151 -------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~-------~~ 214 (520)
T PRK06484 151 -------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR--IPL-------GR 214 (520)
T ss_pred -------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc--CCC-------CC
Confidence 346999999999999887765 379999999998866542100000000 0011111 110 12
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLG 302 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg 302 (676)
+...+|+++++..++.... .+..+.+.++.. . ++.+.
T Consensus 215 ~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~-~-----------~~~~~---------------------------- 254 (520)
T PRK06484 215 LGRPEEIAEAVFFLASDQASYITGSTLVVDGGWT-V-----------YGGSG---------------------------- 254 (520)
T ss_pred CcCHHHHHHHHHHHhCccccCccCceEEecCCee-c-----------ccccc----------------------------
Confidence 4577899999888876432 333443332210 0 00000
Q ss_pred CcccCCHHHHHHHHHHHHhhCCCCcccccccCCCCCccCcCCCccCccCCCCccchhhccCCccccceeecccCCCCCCC
Q 005818 303 WYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKINNSSQSRMVVRASKSNSSRQK 382 (676)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (676)
.....+.. . . ...
T Consensus 255 ------------------------------~~~~~~~~--------~-------~----------------------~~~ 267 (520)
T PRK06484 255 ------------------------------PASTAQAP--------S-------P----------------------LAE 267 (520)
T ss_pred ------------------------------CCCCccCC--------C-------C----------------------ccc
Confidence 00000000 0 0 001
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
..++++||||+|.||.+++++|+++|++| ..+.+|++|++++.++++.+ ++|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 12579999999999999999999999765 34678999999988887653 58999
Q ss_pred EECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 437 FNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 437 ih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
||+||... .+..+...++.+..+++|+.++.++++++... +.++|++||...+. +..
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~ 409 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------------ALP 409 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------------CCC
Confidence 99999642 11112233455677999999999999988663 35788888875442 123
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--H-------HHHHHhcCceeccCCCccchhhHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--F-------ITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~-------~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+...|+.+|...+.+++.+. ...++++..+.|+.+..+.. + ...+.+ ... ...+...+|+++++
T Consensus 410 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~dia~~~ 485 (520)
T PRK06484 410 PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR---RIP-LGRLGDPEEVAEAI 485 (520)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHh---cCC-CCCCcCHHHHHHHH
Confidence 34679999999999998864 24589999999999887631 1 000111 011 12356789999999
Q ss_pred HHHHhcC---CCc-eeEccCC
Q 005818 580 VEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~ 596 (676)
+.++... ..| ++.+.++
T Consensus 486 ~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 486 AFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHhCccccCccCcEEEECCC
Confidence 9988653 234 6666554
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=225.42 Aligned_cols=274 Identities=19% Similarity=0.199 Sum_probs=224.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------------eeccccCCChHHHHHHhhccCCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------------EYGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
+++.||||-||+-|++|++.|++.||+| .++.+|++|...+.++++.++||.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 4679999999999999999999999854 678899999999999999999999
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC---CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG---LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~---~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
|+|+||.+ .|..+.+.|+.+.+++..||.+|||+.+..+ +|+.+.|||..||.....| ..|.+|..|
T Consensus 82 IYNLaAQS---~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~p-------q~E~TPFyP 151 (345)
T COG1089 82 IYNLAAQS---HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIP-------QKETTPFYP 151 (345)
T ss_pred heeccccc---cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCc-------cccCCCCCC
Confidence 99999998 7899999999999999999999999999875 5788889999999887777 888899999
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---HH--------HHHHHhcCc-eeccCC-----CccchhhH
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NF--------ITKISRYNK-VVNIPN-----SMTILDEL 575 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~--------~~~~~~~~~-~~~~~~-----~~~~v~D~ 575 (676)
.|+|+.+|+.+-.+..+|.+.+++-.|.-+.+|--+|. .| +.++..|.. .+..++ +|-|..|-
T Consensus 152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY 231 (345)
T COG1089 152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY 231 (345)
T ss_pred CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence 99999999999999999999999999988888877774 33 233333332 333333 99999999
Q ss_pred HHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccch-------------HhhhhHhccCCC--ccccC
Q 005818 576 LPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTL-------------EEQAKVIVAPRS--NNELD 640 (676)
Q Consensus 576 a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~--~~~ld 640 (676)
++++..+++++.+..|.+++++..|++||++...+..|.+..|..-.. ...++..++|-. .-.=|
T Consensus 232 Ve~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgd 311 (345)
T COG1089 232 VEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGD 311 (345)
T ss_pred HHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCC
Confidence 999999999999999999999999999999999999997776631110 011122233322 11229
Q ss_pred hhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 641 ASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 641 ~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
.+|+++.++|. .++++-+++++....+
T Consensus 312 p~KA~~~LGW~~~~~~~elv~~Mv~~dl~ 340 (345)
T COG1089 312 PTKAKEKLGWRPEVSLEELVREMVEADLE 340 (345)
T ss_pred HHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence 99998655555 5899999988865443
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=242.71 Aligned_cols=272 Identities=16% Similarity=0.200 Sum_probs=198.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++ +++|++++|..... .. ....+++++.+|+.|++++.+++ .++|+|||
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~--~~----l~~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi~ 70 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKA--SF----LKEWGAELVYGDLSLPETLPPSF--KGVTAIID 70 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHh--hh----HhhcCCEEEECCCCCHHHHHHHH--CCCCEEEE
Confidence 48999999999999999999999 67888888864211 11 11247899999999999999999 78999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+++... .++....+.|+.++.+++++|++.+ +++|||+||.+... .+..+|..+|..+
T Consensus 71 ~~~~~~-----~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~----------------~~~~~~~~~K~~~ 128 (317)
T CHL00194 71 ASTSRP-----SDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ----------------YPYIPLMKLKSDI 128 (317)
T ss_pred CCCCCC-----CCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc----------------cCCChHHHHHHHH
Confidence 986432 2344567889999999999999988 99999999953311 0124589999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~ 246 (676)
|++++ +.+++++++||+.+|+. ++..+......+.++.+ .++.+.++|+|++|+|++++.+++++. .+
T Consensus 129 e~~l~----~~~l~~tilRp~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~ 197 (317)
T CHL00194 129 EQKLK----KSGIPYTIFRLAGFFQG------LISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKN 197 (317)
T ss_pred HHHHH----HcCCCeEEEeecHHhhh------hhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccC
Confidence 98765 35899999999988853 22222222333444443 445677899999999999999997653 67
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCccee----------------eecCCCCC---------CcccccCHHHHH-h
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIK----------------FVENRPFN---------DQRYFLDVQKLK-Q 300 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~----------------~~~~~~~~---------~~~~~~~~~k~~-~ 300 (676)
++||+++++.+|+.|+++.+.+.+|.+...... +.+..+.. ......+.+++. .
T Consensus 198 ~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T CHL00194 198 KTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKI 277 (317)
T ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHH
Confidence 899999999999999999999999986432110 00111110 112234566665 4
Q ss_pred CCCccc--CCHHHHHHHHHHHHhh
Q 005818 301 LGWYER--VTWEEGLQKTMKWYIS 322 (676)
Q Consensus 301 lg~~~~--~~~~~~l~~~~~~~~~ 322 (676)
||+.|. .++++.+++.+.....
T Consensus 278 ~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 278 FKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred hCCChhhhhhHHHHHHHHHHHHHH
Confidence 899984 5888888888765554
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=248.03 Aligned_cols=265 Identities=18% Similarity=0.199 Sum_probs=199.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcee-----------------------eccccCCChHHHHHHhhccCCCEEEECccc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFE-----------------------YGKGRLENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~-----------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
||+||||+||||++|++.|+++|++|. .+.+|+.+++.+.++++..++|+|||+||.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 489999999999999999999997652 456899999999999986678999999997
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
. .......++...++.|+.++.+++++|.+.++ ++|++||..+|+.....+ .+|+.+..|.+.|+.+|.
T Consensus 81 ~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~-------~~e~~~~~~~~~y~~sK~ 150 (328)
T TIGR01179 81 I---AVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIP-------ISEDSPLGPINPYGRSKL 150 (328)
T ss_pred c---CcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCC-------ccccCCCCCCCchHHHHH
Confidence 5 23334456677889999999999999999886 677777778886433222 455667778889999999
Q ss_pred HHHHHHHHccCe-EEEEeeecccCCCCChH-------------HHHH---HHHh-c-Cceec-----------cCCCccc
Q 005818 522 MVEELLKEYDNV-CTLRVRMPISSDLNNPR-------------NFIT---KISR-Y-NKVVN-----------IPNSMTI 571 (676)
Q Consensus 522 ~~E~~~~~~~~~-~~l~~~~~r~~~~~g~~-------------~~~~---~~~~-~-~~~~~-----------~~~~~~~ 571 (676)
.+|++++.+.+. .+++++++|++++|||. .++. .... . ..... ...+|+|
T Consensus 151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 230 (328)
T TIGR01179 151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH 230 (328)
T ss_pred HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence 999999987655 78999999999999973 1222 2222 1 11111 1127999
Q ss_pred hhhHHHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhh
Q 005818 572 LDELLPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKE 647 (676)
Q Consensus 572 v~D~a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~ 647 (676)
++|+++++..+++.. .+++||+++++++|+.|+++.+++.+|.+..+...+.. ........+|++|+++.
T Consensus 231 ~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 304 (328)
T TIGR01179 231 VMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR------PGDPASLVADASKIRRE 304 (328)
T ss_pred HHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC------CccccchhcchHHHHHH
Confidence 999999999988752 34799999999999999999999999977654322211 01111334699999876
Q ss_pred CCCC--C-CHHHHHHHhhhccC
Q 005818 648 FPEL--L-SIKESLIKNVFEPN 666 (676)
Q Consensus 648 ~~~~--~-~~~~~l~~~~~~~~ 666 (676)
++|. . +|+++|++++..+.
T Consensus 305 lg~~p~~~~l~~~~~~~~~~~~ 326 (328)
T TIGR01179 305 LGWQPKYTDLEIIIKTAWRWES 326 (328)
T ss_pred hCCCCCcchHHHHHHHHHHHHh
Confidence 5554 2 49999999886544
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=250.19 Aligned_cols=259 Identities=11% Similarity=0.063 Sum_probs=184.0
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCcee-----------------------------eccccCCChHHHHHHhhccC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPFE-----------------------------YGKGRLENRSQLLADIQNVK 432 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-----------------------------~~~~Dl~d~~~~~~~~~~~~ 432 (676)
.++|+||||||+||||++|++.|+++|++|. ++.+|++|.+.+.++++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~- 129 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC- 129 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc-
Confidence 4457999999999999999999999998652 3457999999999999987
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CCc-EEEeecC--eeeecC--CCCCC-CCCCCccc
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GLL-MMNYATG--CIFEYD--AKHPE-GTGIGFKE 505 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~-~v~~sS~--~v~~~~--~~~~~-~~~~~~~~ 505 (676)
|.|||+|+.. +............++|+.++.+++++|++. +++ +|+.||. .+|+.. ...|. -....+..
T Consensus 130 -d~V~hlA~~~---~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~ 205 (367)
T PLN02686 130 -AGVFHTSAFV---DPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD 205 (367)
T ss_pred -cEEEecCeee---cccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence 9999999975 222111122355688999999999999986 675 5566664 466531 11010 00001111
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH------HHHHHHhcCceeccCC---CccchhhHH
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPN---SMTILDELL 576 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~---~~~~v~D~a 576 (676)
++.+..|.+.|+.||..+|++++.+.+..+++++++||+++|||+. .+..++.+.. ..+++ +|+||+|+|
T Consensus 206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~-~~~g~g~~~~v~V~Dva 284 (367)
T PLN02686 206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQ-EMLADGLLATADVERLA 284 (367)
T ss_pred hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCC-ccCCCCCcCeEEHHHHH
Confidence 2234456678999999999999988777899999999999999952 2334444432 22222 799999999
Q ss_pred HHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCC
Q 005818 577 PISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELL 652 (676)
Q Consensus 577 ~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~ 652 (676)
++++.+++.. .+++| +++++.+++.|+++.+.+.+|.+......+... ........+|++|++++++|.|
T Consensus 285 ~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~~d~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 285 EAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSS-----DDTPARFELSNKKLSRLMSRTR 358 (367)
T ss_pred HHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhh-----cCCcccccccHHHHHHHHHHhh
Confidence 9999999852 34588 888899999999999999999765443222110 1111255679999998886653
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=213.24 Aligned_cols=268 Identities=19% Similarity=0.217 Sum_probs=211.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCc------eeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhh
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIP------FEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPE 457 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~------v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 457 (676)
||||||||++|.+|+++.+.+.+.|.+ +..-.+|+++.++.+++++..+|.+|||+||..| ..-....++..
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVG--Glf~N~~ynld 78 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVG--GLFHNNTYNLD 78 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhc--chhhcCCCchH
Confidence 468999999999999999999999862 2345689999999999999999999999999765 34444567788
Q ss_pred HHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC----CCCCCC-CchhhhHHHHHHHHHHcc
Q 005818 458 TIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED----KPNFTG-SFYSKTKAMVEELLKEYD 531 (676)
Q Consensus 458 ~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~----~~~~p~-~~Y~~sK~~~E~~~~~~~ 531 (676)
+++.|+.-.-|++..|-++|+ |+|...|+++|......| ++|+ .|+.|. -.|+..|.++.-..++|.
T Consensus 79 F~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yP-------IdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~ 151 (315)
T KOG1431|consen 79 FIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYP-------IDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYR 151 (315)
T ss_pred HHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCC-------CCHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 788899999998777777 5554 234443 359999999998888898
Q ss_pred CeEEEEeeecccCCCCChH------------HHHHHH----HhcCceeccCC------CccchhhHHHHHHHHHhcCCC-
Q 005818 532 NVCTLRVRMPISSDLNNPR------------NFITKI----SRYNKVVNIPN------SMTILDELLPISVEMAKRNLS- 588 (676)
Q Consensus 532 ~~~~l~~~~~r~~~~~g~~------------~~~~~~----~~~~~~~~~~~------~~~~v~D~a~~~~~~~~~~~~- 588 (676)
.++|-.++.+.|.|+|||. .++.++ ..+...+..++ .|+|++|+|++++.++.+=.+
T Consensus 152 ~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~v 231 (315)
T KOG1431|consen 152 QQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGV 231 (315)
T ss_pred HHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCc
Confidence 8899999999999999996 123222 22332333332 899999999999999986433
Q ss_pred ceeEccCCC--cccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 589 GIWNFTNPG--VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 589 g~yn~~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
+..+++.++ .+|++|+++++.++++...++..-... ....+...+|++||+.+++.+ .+++++|.+++..
T Consensus 232 Epiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK------~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~W 305 (315)
T KOG1431|consen 232 EPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK------SDGQFKKTASNSKLRSLLPDFKFTPLEQAISETVQW 305 (315)
T ss_pred cceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC------CCCCcccccchHHHHHhCCCcccChHHHHHHHHHHH
Confidence 678888887 999999999999999987766322211 111123457999999999977 5799999999875
Q ss_pred cC
Q 005818 665 PN 666 (676)
Q Consensus 665 ~~ 666 (676)
+.
T Consensus 306 y~ 307 (315)
T KOG1431|consen 306 YL 307 (315)
T ss_pred HH
Confidence 54
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=229.24 Aligned_cols=272 Identities=17% Similarity=0.187 Sum_probs=200.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC--C------------------------ceeeccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG--I------------------------PFEYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g--~------------------------~v~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
+.+++||||+||+|++|+++|++++ . +|..+.+|+.|...+.+++.++ .|+
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~---~Vv 80 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA---VVV 80 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc---eEE
Confidence 4589999999999999999999998 2 2466779999999999888875 677
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCC--CCCC
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPN--FTGS 514 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~--~p~~ 514 (676)
|||+.. .......+++..+++||.||.+++++|.+.|++ +||.||..|+.+....+ ..+|+.|. ...+
T Consensus 81 h~aa~~---~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~------n~~E~~p~p~~~~d 151 (361)
T KOG1430|consen 81 HCAASP---VPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPII------NGDESLPYPLKHID 151 (361)
T ss_pred Eecccc---CccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecc------cCCCCCCCcccccc
Confidence 777644 345556678999999999999999999999985 55556667776544323 24444433 3446
Q ss_pred chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----HHHHHHHh-cCceeccCC-----CccchhhHHHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----NFITKISR-YNKVVNIPN-----SMTILDELLPISVEMA 583 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----~~~~~~~~-~~~~~~~~~-----~~~~v~D~a~~~~~~~ 583 (676)
.|+.||..||++++..+....+.++.+|+..+|||+ ..+..+++ +.-....+. +++|++.|+.+++.+.
T Consensus 152 ~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~ 231 (361)
T KOG1430|consen 152 PYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA 231 (361)
T ss_pred ccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence 899999999999999987788999999999999997 23333443 333333322 8999999999988765
Q ss_pred hc-----C--CCceeEccCCCcccHHHHHHHHHhhcCCCCc-ccccchHh---------hhhHhc---cCCC--------
Q 005818 584 KR-----N--LSGIWNFTNPGVVSHNEILEMYKAYIDPGFK-WTNFTLEE---------QAKVIV---APRS-------- 635 (676)
Q Consensus 584 ~~-----~--~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~---------~~~~~~---~~~~-------- 635 (676)
.. + .++.|++.+++++...++...+.+.+|...+ ...+|... ...... .|..
T Consensus 232 ~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~ 311 (361)
T KOG1430|consen 232 RALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALL 311 (361)
T ss_pred HHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeee
Confidence 42 2 2359999999999999999999999998877 33333211 101111 1111
Q ss_pred --ccccChhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 636 --NNELDASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 636 --~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
+.-++++|+++.+++. .++++++.+++.....
T Consensus 312 ~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~ 347 (361)
T KOG1430|consen 312 GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVAS 347 (361)
T ss_pred ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhh
Confidence 3355999998776655 5999999999864433
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=235.72 Aligned_cols=198 Identities=26% Similarity=0.353 Sum_probs=168.6
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
|||||||||||++|+++|+++|+.| .++.+|+.|.+.++++++..++|+|||+|+.. .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~---~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS---S 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS---S
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc---c
Confidence 7999999999999999999999764 56779999999999999998999999999965 2
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
......++...++.|+.++.+++++|++.++ +++++||+.+|+.....+ ..|+.+..|.+.|+.+|..+|++
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~-------~~e~~~~~~~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEP-------IDEDSPINPLSPYGASKRAAEEL 150 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSS-------BETTSGCCHSSHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccccccc
Confidence 2233467778899999999999999999998 889999999998664333 45555668889999999999999
Q ss_pred HHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcCC--C
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRNL--S 588 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~--~ 588 (676)
++.+.+..+++++++|++++|||. .++.++..+++....++ +++|++|+|++++.+++++. +
T Consensus 151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 230 (236)
T PF01370_consen 151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG 230 (236)
T ss_dssp HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence 999877779999999999999997 46777777775443332 89999999999999999986 6
Q ss_pred ceeEcc
Q 005818 589 GIWNFT 594 (676)
Q Consensus 589 g~yn~~ 594 (676)
++||++
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 899986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-26 Score=209.62 Aligned_cols=284 Identities=20% Similarity=0.206 Sum_probs=202.0
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEcc
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFA 89 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a 89 (676)
|+|||||||||++|+..|.+. +++|+.++|+...... ..+..++ ..+.+..... .++|+|||+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~------~~~~~v~-------~~~~~~~~~~-~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQ------NLHPNVT-------LWEGLADALT-LGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhh------hcCcccc-------ccchhhhccc-CCCCEEEECC
Confidence 689999999999999999999 7888888886532211 0111111 1223333331 2799999999
Q ss_pred ccCCcCC--cCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 90 AQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 90 ~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|...... +.+..+.+.+.-+..|..|.++..+.. +++.||.-|..+-||.+..... +|+. +...+.-+..-..
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~---tE~~-~~g~~Fla~lc~~ 140 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV---TEES-PPGDDFLAQLCQD 140 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee---ecCC-CCCCChHHHHHHH
Confidence 9987654 444556788999999999999988544 4678888888999999876654 4552 2223344455556
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCC
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~ 246 (676)
.|+.+.. ++..|.+++.+|.|.|.++.. .+++.+......+---+ .|+|+|+.+|||++|++++|..++++....
T Consensus 141 WE~~a~~-a~~~gtRvvllRtGvVLs~~G---GaL~~m~~~fk~glGG~-~GsGrQ~~SWIhieD~v~~I~fll~~~~ls 215 (297)
T COG1090 141 WEEEALQ-AQQLGTRVVLLRTGVVLSPDG---GALGKMLPLFKLGLGGK-LGSGRQWFSWIHIEDLVNAILFLLENEQLS 215 (297)
T ss_pred HHHHHhh-hhhcCceEEEEEEEEEecCCC---cchhhhcchhhhccCCc-cCCCCceeeeeeHHHHHHHHHHHHhCcCCC
Confidence 6777765 344599999999999999865 34445444433332122 489999999999999999999999998888
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC--CCC-----cccccCHHHHHhCCCcccC-CHHHHHHHHHH
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP--FND-----QRYFLDVQKLKQLGWYERV-TWEEGLQKTMK 318 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~-----~~~~~~~~k~~~lg~~~~~-~~~~~l~~~~~ 318 (676)
+.||++.+.|++..++...+.+.++++....++....+- ... .....-.+|+.+.||+.++ +++++|.+.+.
T Consensus 216 Gp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 216 GPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred CcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 999999999999999999999999987644332211000 011 1122334566678999998 89999988764
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=235.98 Aligned_cols=241 Identities=17% Similarity=0.145 Sum_probs=178.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC--Cce----------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG--IPF----------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g--~~v----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
+|+|+||||+||||++|+++|+++| ++| .++.+|++|++.+.++++++ |+|||+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i--D~Vih~ 81 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV--DYVVHA 81 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC--CEEEEC
Confidence 4689999999999999999999986 433 35678999999999999876 999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
||.. .+.....++...+++|+.|+.+++++|.+.++ ++|++||.. +..|.++|+.
T Consensus 82 Ag~~---~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~---------------------~~~p~~~Y~~ 137 (324)
T TIGR03589 82 AALK---QVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK---------------------AANPINLYGA 137 (324)
T ss_pred cccC---CCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC---------------------CCCCCCHHHH
Confidence 9976 34445567778999999999999999999887 567777642 1234578999
Q ss_pred hHHHHHHHHHHc---cCeEEEEeeecccCCCCChH-----HHHHHHHhcCceeccC-----CCccchhhHHHHHHHHHhc
Q 005818 519 TKAMVEELLKEY---DNVCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIP-----NSMTILDELLPISVEMAKR 585 (676)
Q Consensus 519 sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~ 585 (676)
||..+|++++.+ .+..+++++++|++++|||+ .+...+..+...+..+ .+|+|++|++++++.++++
T Consensus 138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~ 217 (324)
T TIGR03589 138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER 217 (324)
T ss_pred HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence 999999999774 34579999999999999984 3334444443222222 2799999999999999987
Q ss_pred CCC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCC--CHHHHHHH
Q 005818 586 NLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELL--SIKESLIK 660 (676)
Q Consensus 586 ~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~--~~~~~l~~ 660 (676)
... .+|+ +++..+++.|+++.+.+..... ..+....+. .....+|++|+++.++|.| ++++++.+
T Consensus 218 ~~~~~~~~-~~~~~~sv~el~~~i~~~~~~~--~~~~~~g~~-------~~~~~~~~~~~~~~lg~~~~~~l~~~~~~ 285 (324)
T TIGR03589 218 MLGGEIFV-PKIPSMKITDLAEAMAPECPHK--IVGIRPGEK-------LHEVMITEDDARHTYELGDYYAILPSISF 285 (324)
T ss_pred CCCCCEEc-cCCCcEEHHHHHHHHHhhCCee--EeCCCCCch-------hHhhhcChhhhhhhcCCCCeEEEcccccc
Confidence 533 4774 6667899999999999865321 111110000 0123469999988777664 66777653
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-26 Score=234.64 Aligned_cols=237 Identities=20% Similarity=0.262 Sum_probs=184.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHccC--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLTE-- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-- 80 (676)
.++++|||||||||||+++++.|+++ +++|++++|.......... ......++++++.+|++|++.+.+++...
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 34679999999999999999999999 6788888886432110000 00112347899999999999999988543
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChh
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 160 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 160 (676)
++|+|||+++..... ....++.|+.++.+++++|++.+ +++||++||.++|+ |...|
T Consensus 136 ~~D~Vi~~aa~~~~~-----~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~-----------------p~~~~ 192 (390)
T PLN02657 136 PVDVVVSCLASRTGG-----VKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK-----------------PLLEF 192 (390)
T ss_pred CCcEEEECCccCCCC-----CccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC-----------------cchHH
Confidence 699999998753211 12446789999999999999987 89999999987653 23458
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE-eeeeHHHHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR-SYLYCEDVAEAFDTI 239 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~D~a~ai~~~ 239 (676)
..+|..+|+.++. ...+++++++||+.+||+. ..++..+..+.++.+++++...+ ++||++|+|++++.+
T Consensus 193 ~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~-------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~ 263 (390)
T PLN02657 193 QRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL-------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADC 263 (390)
T ss_pred HHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc-------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHH
Confidence 9999999998875 3468999999999999752 23445666788887888887655 679999999999999
Q ss_pred HhcC-CCCceEEEcCC-CcccHHHHHHHHHHHhCCCCC
Q 005818 240 LHKG-EVGHVYNIGTK-KERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 240 ~~~~-~~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~~ 275 (676)
++.+ ..+++||++++ +.+|+.|+++.+.+.+|.++.
T Consensus 264 ~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 264 VLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred HhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 8654 35789999986 589999999999999997643
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-27 Score=222.92 Aligned_cols=205 Identities=19% Similarity=0.213 Sum_probs=158.8
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCc---------------------------e----eeccccCCChHHHHHHhhccCCCE
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIP---------------------------F----EYGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~---------------------------v----~~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
||||||+|.||+.|+++|++.+.. + ..+.+|++|.+.+..+++..+||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799999999999999999998731 2 235789999999999999889999
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|||+||+- .++.++.+|.+++++|+.||.|++++|.++++ ++|++||+... .|.|
T Consensus 81 VfHaAA~K---hVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------------------~Ptn 136 (293)
T PF02719_consen 81 VFHAAALK---HVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------------------NPTN 136 (293)
T ss_dssp EEE---------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS---------------------S--S
T ss_pred EEEChhcC---CCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC---------------------CCCc
Confidence 99999998 68899999999999999999999999999998 67777876543 5779
Q ss_pred chhhhHHHHHHHHHHccCeE---EEEeeecccCCCCChH-----HHHHHHHhcCceeccCC----CccchhhHHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDNVC---TLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPN----SMTILDELLPISVEM 582 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~---~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~----~~~~v~D~a~~~~~~ 582 (676)
.||.||..+|+++.++++.. ..+++.+|++||.|.+ .|..++.++++.+.... -|+.++++++.++.+
T Consensus 137 vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a 216 (293)
T PF02719_consen 137 VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQA 216 (293)
T ss_dssp HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHH
Confidence 99999999999999986544 7999999999999875 68889999888654332 677899999999999
Q ss_pred HhcCCC-ceeEccCCCcccHHHHHHHHHhhcCCC
Q 005818 583 AKRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPG 615 (676)
Q Consensus 583 ~~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~ 615 (676)
+....+ ++|.+--++++++.|+++.+.+..|..
T Consensus 217 ~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 217 AALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred HhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 887654 599999999999999999999999853
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=228.21 Aligned_cols=207 Identities=19% Similarity=0.222 Sum_probs=181.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCC---------------------------ceeeccccCCChHHHHHHhhccCCCE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGI---------------------------PFEYGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~---------------------------~v~~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
..++|+||||+|-||+.|++++++.+. ++.++-||+.|.+.+++++++.+||+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 346899999999999999999999883 23677899999999999999999999
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|||+||.- .|+.++.||.+.+++|+.||.|++++|.++++ ++|.+||+... .|.|
T Consensus 329 VfHAAA~K---HVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV---------------------~PtN 384 (588)
T COG1086 329 VFHAAALK---HVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV---------------------NPTN 384 (588)
T ss_pred EEEhhhhc---cCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc---------------------CCch
Confidence 99999998 68889999999999999999999999999998 67777876433 6779
Q ss_pred chhhhHHHHHHHHHHccC-eE--EEEeeecccCCCCChH-----HHHHHHHhcCceeccCC----CccchhhHHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDN-VC--TLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPN----SMTILDELLPISVEM 582 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~-~~--~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~----~~~~v~D~a~~~~~~ 582 (676)
.||.||.++|++++++++ .. +.+++.+|++||.|.+ -|-.++.+|++.+..-. -|..++|.++.++++
T Consensus 385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA 464 (588)
T COG1086 385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQA 464 (588)
T ss_pred HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHH
Confidence 999999999999999865 23 4999999999999986 57788888877553333 567899999999999
Q ss_pred HhcCCCc-eeEccCCCcccHHHHHHHHHhhcC
Q 005818 583 AKRNLSG-IWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 583 ~~~~~~g-~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
.....+| +|-+--|+++++.|+++.+.+..|
T Consensus 465 ~a~~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 465 GAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred HhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 8877655 999999999999999999999997
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=227.70 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=181.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|||+|||||||||++|+++|+++||+| +++.+|+.|++.+.++++++ |+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~--d~Vi~~~~~~--- 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGV--TAIIDASTSR--- 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCC--CEEEECCCCC---
Confidence 589999999999999999999999875 45678999999999999988 9999997632
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcE-EEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLM-MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~-v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
..++....++|+.++.+++++|++.|++. |++||..+.. .+.++|..+|..+|+
T Consensus 76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~--------------------~~~~~~~~~K~~~e~ 130 (317)
T CHL00194 76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ--------------------YPYIPLMKLKSDIEQ 130 (317)
T ss_pred -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc--------------------cCCChHHHHHHHHHH
Confidence 23445678899999999999999999854 5555432110 112458999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChH--HHHHHHHhcCceecc----CCCccchhhHHHHHHHHHhcC--CCceeEccCCC
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVVNI----PNSMTILDELLPISVEMAKRN--LSGIWNFTNPG 597 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~----~~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~ 597 (676)
+++. .+++++++|++++|+.. .+...++.+.+.... ..+|+|++|+|++++.+++.+ .+++||+++++
T Consensus 131 ~l~~----~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~ 206 (317)
T CHL00194 131 KLKK----SGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPK 206 (317)
T ss_pred HHHH----cCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCC
Confidence 9864 47899999999887541 222333333332211 128899999999999999865 35799999999
Q ss_pred cccHHHHHHHHHhhcCCCCcccccchHhhh--hHh-------------------ccCCCccccChhHHHhhCCCCC----
Q 005818 598 VVSHNEILEMYKAYIDPGFKWTNFTLEEQA--KVI-------------------VAPRSNNELDASKLKKEFPELL---- 652 (676)
Q Consensus 598 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~ld~~k~~~~~~~~~---- 652 (676)
.+|+.|+++.+.+.+|.+..+.++|..... ..+ .....+...+.++++++++..|
T Consensus 207 ~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 286 (317)
T CHL00194 207 SWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELI 286 (317)
T ss_pred ccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhh
Confidence 999999999999999987666655542110 000 0000122346777887777553
Q ss_pred CHHHHHHHhhhccCC
Q 005818 653 SIKESLIKNVFEPNK 667 (676)
Q Consensus 653 ~~~~~l~~~~~~~~~ 667 (676)
++++++++++..+.+
T Consensus 287 ~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 287 SLEDYFQEYFERILK 301 (317)
T ss_pred hHHHHHHHHHHHHHH
Confidence 788888888765544
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=235.92 Aligned_cols=262 Identities=24% Similarity=0.262 Sum_probs=191.2
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCcccc-ccCC----C------------C----CCCCCCe
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSN-LKNL----N------------P----SRLSPNF 60 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~-~~~~----~------------~----~~~~~~v 60 (676)
+++..++|||||||||||.+|++.|++.++++ +|+++.|...... .+.+ . . .....++
T Consensus 115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 45678999999999999999999999986654 8888888653221 1111 0 0 0114579
Q ss_pred EEEEecCCCH------HHHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecc
Q 005818 61 KFIKGDVASA------DLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTD 134 (676)
Q Consensus 61 ~~v~~Dl~d~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~ 134 (676)
..+.+|++++ +..+.+. .++|+|||+|+....+ .++...++.|+.|+.+++++|+..+.+++|||+||+
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~--~~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIA--KEVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHH--hcCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 9999999987 3455555 5699999999988753 456788999999999999999987668899999999
Q ss_pred cccCCCCCCcCCCCC------------------------------------C--CC-----------------CCCCCCh
Q 005818 135 EVYGETDEDAVVGNH------------------------------------E--AS-----------------QLLPTNP 159 (676)
Q Consensus 135 ~vyg~~~~~~~~~~~------------------------------------e--~~-----------------~~~p~~~ 159 (676)
.|||...+...+... + .. ...-.|.
T Consensus 270 yVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt 349 (605)
T PLN02503 270 YVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT 349 (605)
T ss_pred eeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh
Confidence 999987532211100 0 00 0111378
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCc----------cCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNV----------YGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i----------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
|..+|.++|+++++++ .++|++|+||+.| ++++.. ...+.++. ...|.--.++++++...++|+|
T Consensus 350 Yt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~--~~~p~~~~-~g~G~lr~~~~~~~~~~DiVPV 424 (605)
T PLN02503 350 YVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNR--MMDPIVLY-YGKGQLTGFLADPNGVLDVVPA 424 (605)
T ss_pred HHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCcc--ccchhhhh-eeccceeEEEeCCCeeEeEEee
Confidence 9999999999999755 4799999999999 445431 12222222 2244433467889999999999
Q ss_pred HHHHHHHHHHHhc-----CCCCceEEEcCC--CcccHHHHHHHHHHHhCCCC
Q 005818 230 EDVAEAFDTILHK-----GEVGHVYNIGTK--KERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 230 ~D~a~ai~~~~~~-----~~~~~~y~i~~~--~~~s~~el~~~i~~~~g~~~ 274 (676)
|.++.+++.++.. .....+||++++ +++++.++.+.+.+.+...|
T Consensus 425 D~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P 476 (605)
T PLN02503 425 DMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP 476 (605)
T ss_pred cHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence 9999999988431 124679999988 89999999999988776544
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=227.90 Aligned_cols=256 Identities=20% Similarity=0.234 Sum_probs=185.5
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccC---------CCCCCCC-CCeEEEEecCCCH------H
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKN---------LNPSRLS-PNFKFIKGDVASA------D 71 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~---------~~~~~~~-~~v~~v~~Dl~d~------~ 71 (676)
+|||||||||||++|++.|+++|+..+|+++.|...... .+. +...... .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999976688999988653210 000 0000011 5799999999764 4
Q ss_pred HHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCC-
Q 005818 72 LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHE- 150 (676)
Q Consensus 72 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e- 150 (676)
.+..+. .++|+|||+|+..... .......+.|+.++.+++++|.+.+ +++|||+||.++|+...........+
T Consensus 81 ~~~~~~--~~~d~vih~a~~~~~~---~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 81 EWERLA--ENVDTIVHNGALVNWV---YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred HHHHHH--hhCCEEEeCCcEeccC---CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCccccccc
Confidence 555555 6899999999987642 2345677899999999999999876 78899999999998754322111011
Q ss_pred -CCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC----CCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 151 -ASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 151 -~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
.....+.+.|+.+|+.+|.+++.+.+. |++++++||+.++|+... ...++..++........++ .......+
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~ 231 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTED 231 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccC
Confidence 111223568999999999999887654 999999999999997332 1234444554443332222 11223567
Q ss_pred eeeHHHHHHHHHHHHhcCCC---CceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005818 226 YLYCEDVAEAFDTILHKGEV---GHVYNIGTKKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~~---~~~y~i~~~~~~s~~el~~~i~~~~g~~~ 274 (676)
++|++|++++++.++.++.. +++||+++++++++.|+++.+.+ +|.+.
T Consensus 232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 99999999999999876553 68999999999999999999988 77653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=230.65 Aligned_cols=254 Identities=14% Similarity=0.117 Sum_probs=181.1
Q ss_pred CccEEEEE----cCCcchhHHHHHHHHHcCCceeecccc----------------------C----CChHHHHHHhhccC
Q 005818 383 PFLKFLIY----GRTGWIGGLLSKICEKKGIPFEYGKGR----------------------L----ENRSQLLADIQNVK 432 (676)
Q Consensus 383 ~~~~vlit----G~~G~iG~~l~~~L~~~g~~v~~~~~D----------------------l----~d~~~~~~~~~~~~ 432 (676)
++|+|+|| |||||||++|+++|+++||+|..+..+ + .|..++.+++....
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~~ 130 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGAG 130 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccCC
Confidence 34689999 999999999999999999987433211 1 13333555554446
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+|+|||+++. +..++.+++++|++.|+ ++|++||..+|+.....| ..|+.+..
T Consensus 131 ~d~Vi~~~~~-------------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p-------~~E~~~~~ 184 (378)
T PLN00016 131 FDVVYDNNGK-------------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPP-------HVEGDAVK 184 (378)
T ss_pred ccEEEeCCCC-------------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCC-------CCCCCcCC
Confidence 7999998761 13467899999999998 678888889987543333 33444444
Q ss_pred CCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCC-----CccchhhHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPN-----SMTILDELLPIS 579 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~ 579 (676)
|.+ +|..+|++++. .+++++++||+++|||. .++.++..+.+....+. +|+|++|+|+++
T Consensus 185 p~~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai 256 (378)
T PLN00016 185 PKA----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMF 256 (378)
T ss_pred Ccc----hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHH
Confidence 432 89999998864 46899999999999984 24455665555332221 799999999999
Q ss_pred HHHHhcC--CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhH--hccC-C-CccccChhHHHhhCCCC--
Q 005818 580 VEMAKRN--LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKV--IVAP-R-SNNELDASKLKKEFPEL-- 651 (676)
Q Consensus 580 ~~~~~~~--~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~-~-~~~~ld~~k~~~~~~~~-- 651 (676)
+.+++++ .+++||+++++.+|+.|+++.+.+.+|.+..+..++....... ...| + ....+|++|++++++|.
T Consensus 257 ~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~ 336 (378)
T PLN00016 257 ALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPK 336 (378)
T ss_pred HHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCC
Confidence 9999875 3479999999999999999999999998765543332211000 0001 1 13346999998877765
Q ss_pred CCHHHHHHHhhhccCCCCC
Q 005818 652 LSIKESLIKNVFEPNKKPT 670 (676)
Q Consensus 652 ~~~~~~l~~~~~~~~~~~~ 670 (676)
.+++++|++++..+.+..+
T Consensus 337 ~~l~egl~~~~~~~~~~~~ 355 (378)
T PLN00016 337 FDLVEDLKDRYELYFGRGR 355 (378)
T ss_pred CCHHHHHHHHHHHHHhcCC
Confidence 4899999999988766543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=225.60 Aligned_cols=250 Identities=9% Similarity=-0.001 Sum_probs=174.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
++|+|||||||||++++++|+++||+| .++.+|++|.+.+.+++.++ |.|+|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~--d~v~~ 84 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGC--SGLFC 84 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCC--CEEEE
Confidence 579999999999999999999999865 23557899999999999887 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecC-CCCCCCCCCCccccCCCCCC---
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYD-AKHPEGTGIGFKEEDKPNFT--- 512 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~-~~~~~~~~~~~~~e~~~~~p--- 512 (676)
+++.. . ....+.+..+++|+.|+.+++++|.+. ++ ++|++||..++... ...+ ... ..+|+.+..+
T Consensus 85 ~~~~~---~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~--~~~-~~~E~~~~~~~~~ 156 (297)
T PLN02583 85 CFDPP---S--DYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNIS--TQK-DVDERSWSDQNFC 156 (297)
T ss_pred eCccC---C--cccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCC--CCC-CCCcccCCCHHHH
Confidence 87643 1 111234678999999999999999886 45 67777777555321 1111 011 1334433221
Q ss_pred ---CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHH-HHHHHhcCcee--ccCCCccchhhHHHHHHHHHhcC
Q 005818 513 ---GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNF-ITKISRYNKVV--NIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 513 ---~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~-~~~~~~~~~~~--~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
...|+.||.++|++++.+.+..+++++++||+++|||... ....+.+.... ....+|+||+|+|++++.+++.+
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 157 RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc
Confidence 2369999999999999886667899999999999999632 11222222111 11127999999999999999976
Q ss_pred -CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC
Q 005818 587 -LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE 650 (676)
Q Consensus 587 -~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~ 650 (676)
..|.|+++++......++++++.+.+..- +++... ... ........+++.|+++++.+
T Consensus 237 ~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~-~~~-~~~~~~~~~~~~k~~~l~~~ 295 (297)
T PLN02583 237 SSYGRYLCFNHIVNTEEDAVKLAQMLSPLI----PSPPPY-EMQ-GSEVYQQRIRNKKLNKLMED 295 (297)
T ss_pred ccCCcEEEecCCCccHHHHHHHHHHhCCCC----CCCCcc-ccc-CCCccccccChHHHHHhCcc
Confidence 44799999877666788999999987532 111110 000 01112456899999998864
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-25 Score=222.10 Aligned_cols=260 Identities=16% Similarity=0.109 Sum_probs=175.2
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCceeeccccCCC-------------hHHHHHHhhccCCCEEEECccccCCCCcchhcc
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN-------------RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCET 453 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d-------------~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 453 (676)
||||||+||||++|++.|+++|++|..+..+... ...+.+.+.+ +|+|||+|+.... ...+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~D~Vvh~a~~~~~-~~~~~~~ 77 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEG--ADAVINLAGEPIA-DKRWTEE 77 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCC--CCEEEECCCCCcc-cccCCHH
Confidence 6899999999999999999999987433322111 1223344554 4999999996410 1122334
Q ss_pred chhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecC--eeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHc
Q 005818 454 HKPETIRTNVVGTLTLADVCRENGL-LMMNYATG--CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY 530 (676)
Q Consensus 454 ~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~--~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~ 530 (676)
++...+++|+.++.+++++|++.++ +.++++|| .+|+.....+ .+|+.+..+.+.|+..+...|..+..+
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~-------~~E~~~~~~~~~~~~~~~~~e~~~~~~ 150 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV-------FTEEDSPAGDDFLAELCRDWEEAAQAA 150 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC-------cCcccCCCCCChHHHHHHHHHHHhhhc
Confidence 5567889999999999999999987 33444333 4565332222 445544455566777777778777654
Q ss_pred cCeEEEEeeecccCCCCChHH-HHHH---HHhcC--cee---ccCCCccchhhHHHHHHHHHhcC-CCceeEccCCCccc
Q 005818 531 DNVCTLRVRMPISSDLNNPRN-FITK---ISRYN--KVV---NIPNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVS 600 (676)
Q Consensus 531 ~~~~~l~~~~~r~~~~~g~~~-~~~~---~~~~~--~~~---~~~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s 600 (676)
. ..+++++++|++++|||.. .+.. ..... ..+ ....+++|++|+|+++..+++++ ..|+||+++++++|
T Consensus 151 ~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s 229 (292)
T TIGR01777 151 E-DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVR 229 (292)
T ss_pred h-hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccC
Confidence 3 4579999999999999852 1111 11111 111 11238999999999999999875 55899999999999
Q ss_pred HHHHHHHHHhhcCCCCcccccchHhhhhH----hccCCCccccChhHHHhhCCCC--CCHHHHH
Q 005818 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKV----IVAPRSNNELDASKLKKEFPEL--LSIKESL 658 (676)
Q Consensus 601 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l 658 (676)
+.|+++.+++.+|.+.. .++|....... ......+.+.+++|+++++|++ ++++|+|
T Consensus 230 ~~di~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 230 NKEFAKALARALHRPAF-FPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHHHHHHHHHhCCCCc-CcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 99999999999997643 34554332111 0111125678999999888776 4677764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=231.62 Aligned_cols=219 Identities=13% Similarity=0.147 Sum_probs=160.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCC------------------------------------------------ceeecc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGI------------------------------------------------PFEYGK 415 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~------------------------------------------------~v~~~~ 415 (676)
.++|||||||||||++|++.|++.+. ++.++.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 46899999999999999999987531 245677
Q ss_pred ccCC-------ChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CC-cEEEeecC
Q 005818 416 GRLE-------NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GL-LMMNYATG 486 (676)
Q Consensus 416 ~Dl~-------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~ 486 (676)
+|++ +.+.++++++++ |+|||+||.. +. ..++...+++|+.||.+++++|++. ++ ++||+||+
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~v--D~ViH~AA~v---~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~ 162 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEI--DIVVNLAATT---NF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA 162 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCC--CEEEECcccc---CC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence 8887 445566777765 9999999966 22 2467788999999999999999986 55 57888999
Q ss_pred eeeecCCCCCCCCCCCccccC-------------------------------------------C---CCCCCCchhhhH
Q 005818 487 CIFEYDAKHPEGTGIGFKEED-------------------------------------------K---PNFTGSFYSKTK 520 (676)
Q Consensus 487 ~v~~~~~~~~~~~~~~~~~e~-------------------------------------------~---~~~p~~~Y~~sK 520 (676)
+|||.......+ .++.... . ...+.+.|+.||
T Consensus 163 ~vyG~~~~~i~E--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK 240 (491)
T PLN02996 163 YVCGEKSGLILE--KPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240 (491)
T ss_pred EEecCCCceeee--ecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence 999763211000 0011000 0 112347899999
Q ss_pred HHHHHHHHHccCeEEEEeeecccCCCCChHH---------------HHHHHHhcCceeccC-----CCccchhhHHHHHH
Q 005818 521 AMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------------FITKISRYNKVVNIP-----NSMTILDELLPISV 580 (676)
Q Consensus 521 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~ 580 (676)
.++|++++.+.+ +++++++||++++||.. ++..+..+......+ .+++||+|++++++
T Consensus 241 ~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l 318 (491)
T PLN02996 241 AMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMI 318 (491)
T ss_pred HHHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHH
Confidence 999999988753 79999999999999741 122223333322222 29999999999999
Q ss_pred HHHhcC-----CCceeEccCC--CcccHHHHHHHHHhhcCC
Q 005818 581 EMAKRN-----LSGIWNFTNP--GVVSHNEILEMYKAYIDP 614 (676)
Q Consensus 581 ~~~~~~-----~~g~yn~~~~--~~~s~~e~~~~i~~~~g~ 614 (676)
.++.+. ...+||++++ +++|+.|+++.+.+.++.
T Consensus 319 ~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 319 VAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred HHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 998752 2359999998 899999999999998864
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-25 Score=216.92 Aligned_cols=219 Identities=25% Similarity=0.320 Sum_probs=133.7
Q ss_pred EEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc----c-cCCCCCC--------CCCCeEEEEecCCCH------HH
Q 005818 12 ITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN----L-KNLNPSR--------LSPNFKFIKGDVASA------DL 72 (676)
Q Consensus 12 VtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~-~~~~~~~--------~~~~v~~v~~Dl~d~------~~ 72 (676)
|||||||||++|++.|++.++..+|+++.|...... . +.+.... ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999976559999999764311 1 1111111 267999999999975 34
Q ss_pred HHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcC------C
Q 005818 73 VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAV------V 146 (676)
Q Consensus 73 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~------~ 146 (676)
+..+. ..+|+|||+|+.++...+++ ++.+.||.||.+|++.|.... .++|+|+||+.+.+...+... .
T Consensus 81 ~~~L~--~~v~~IiH~Aa~v~~~~~~~---~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~ 154 (249)
T PF07993_consen 81 YQELA--EEVDVIIHCAASVNFNAPYS---ELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEE 154 (249)
T ss_dssp HHHHH--HH--EEEE--SS-SBS-S-----EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred hhccc--cccceeeecchhhhhcccch---hhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccc
Confidence 55555 68999999999998765544 467899999999999999755 569999999555555443221 1
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC----CCChHHHHH-HHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFI-LLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~ 221 (676)
+...+......++|..||+.+|+++++++++.|+|++|+|||.|+|.... ...++..++ .....+......+++.
T Consensus 155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 234 (249)
T PF07993_consen 155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPD 234 (249)
T ss_dssp --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---
T ss_pred cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCC
Confidence 11222333455789999999999999998888999999999999994331 223234444 4444444334556666
Q ss_pred ceEeeeeHHHHHHHH
Q 005818 222 NVRSYLYCEDVAEAF 236 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai 236 (676)
...++++||.+|++|
T Consensus 235 ~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 235 ARLDLVPVDYVARAI 249 (249)
T ss_dssp TT--EEEHHHHHHHH
T ss_pred ceEeEECHHHHHhhC
Confidence 678999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-24 Score=234.26 Aligned_cols=235 Identities=16% Similarity=0.194 Sum_probs=173.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVD 449 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 449 (676)
|||+||||+||||++|+++|+++|++| .++.+|+.|.+.+.++++++ |+|||+|+.. .
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~v--D~VVHlAa~~---~-- 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGA--DVVAHCAWVR---G-- 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCC--CEEEECCCcc---c--
Confidence 589999999999999999999999865 35678999999999999876 9999999854 1
Q ss_pred hhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHH
Q 005818 450 WCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLK 528 (676)
Q Consensus 450 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~ 528 (676)
..+++|+.++.+++++|++.+++ +|++||.. |..+|+++.
T Consensus 74 -------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------------K~aaE~ll~ 114 (854)
T PRK05865 74 -------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------------QPRVEQMLA 114 (854)
T ss_pred -------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------------HHHHHHHHH
Confidence 14689999999999999999885 55555420 899999886
Q ss_pred HccCeEEEEeeecccCCCCChH--HHHHHHHhcCceeccC-----CCccchhhHHHHHHHHHhcC--CCceeEccCCCcc
Q 005818 529 EYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIP-----NSMTILDELLPISVEMAKRN--LSGIWNFTNPGVV 599 (676)
Q Consensus 529 ~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~~ 599 (676)
+ ++++++++|++++|||. .++..+... .....+ .+|+|++|+|++++.+++++ .+|+||+++++.+
T Consensus 115 ~----~gl~~vILRp~~VYGP~~~~~i~~ll~~-~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~ 189 (854)
T PRK05865 115 D----CGLEWVAVRCALIFGRNVDNWVQRLFAL-PVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL 189 (854)
T ss_pred H----cCCCEEEEEeceEeCCChHHHHHHHhcC-ceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence 4 47999999999999995 455554432 222222 17999999999999998654 4579999999999
Q ss_pred cHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhccCCCCCCC
Q 005818 600 SHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEPNKKPTFG 672 (676)
Q Consensus 600 s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~ 672 (676)
|+.|+++.+.+.... ........ ...... ........+|++|+++.++|. .+++++|++++..+..+...|
T Consensus 190 Si~EIae~l~~~~~~v~~~~~~~~-~~~~~~-~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ri~~~ 263 (854)
T PRK05865 190 TFRRIAAALGRPMVPIGSPVLRRV-TSFAEL-ELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGRIGLG 263 (854)
T ss_pred cHHHHHHHHhhhhccCCchhhhhc-cchhhh-hcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcccc
Confidence 999999999875321 00000000 000000 001113457999998877766 489999999998776654444
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-23 Score=222.36 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=171.9
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||+||||++|++.|+++ +++|++++|.... ....+++++.+|+.|+. +.+++ .++|+|||
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~---------~~~~~ve~v~~Dl~d~~-l~~al--~~~D~VIH 66 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHD---------ALDPRVDYVCASLRNPV-LQELA--GEADAVIH 66 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhh---------cccCCceEEEccCCCHH-HHHHh--cCCCEEEE
Confidence 47999999999999999999999 6888998885321 11246889999999985 66776 68999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+.... . ....|+.++.|++++|++.+ + ++||+||. +|... .|. .+
T Consensus 67 LAa~~~~-----~---~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~--~G~~~-----------------~~~----~a 113 (699)
T PRK12320 67 LAPVDTS-----A---PGGVGITGLAHVANAAARAG-A-RLLFVSQA--AGRPE-----------------LYR----QA 113 (699)
T ss_pred cCccCcc-----c---hhhHHHHHHHHHHHHHHHcC-C-eEEEEECC--CCCCc-----------------ccc----HH
Confidence 9986421 1 12579999999999999988 5 79999985 33211 132 36
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
|.++. .++++++++|++++|||+.... +++..++.....++++ .++|++|++++++.+++.+.
T Consensus 114 E~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI----------~vIyVdDvv~alv~al~~~~- 178 (699)
T PRK12320 114 ETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI----------RVLHLDDLVRFLVLALNTDR- 178 (699)
T ss_pred HHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce----------EEEEHHHHHHHHHHHHhCCC-
Confidence 66554 3569999999999999976432 3555555555444433 35899999999999998654
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCcccCCHHH--HHHHH
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEE--GLQKT 316 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~--~l~~~ 316 (676)
.++|||++++.+|+.|+.+.+...... . .+. .........-+....+ .++|.|+..|+. .+.++
T Consensus 179 ~GiyNIG~~~~~Si~el~~~i~~~~p~-~--~~~----~~~~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~ 245 (699)
T PRK12320 179 NGVVDLATPDTTNVVTAWRLLRSVDPH-L--RTR----RVRSWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT 245 (699)
T ss_pred CCEEEEeCCCeeEHHHHHHHHHHhCCC-c--ccc----ccccHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence 459999999999999999888765221 1 111 1111122345666665 489999987654 45544
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=236.47 Aligned_cols=259 Identities=14% Similarity=0.174 Sum_probs=180.6
Q ss_pred cEEEEEcCCcchhHHHHHHHH--HcCCce------------------------eeccccCCCh------HHHHHHhhccC
Q 005818 385 LKFLIYGRTGWIGGLLSKICE--KKGIPF------------------------EYGKGRLENR------SQLLADIQNVK 432 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~--~~g~~v------------------------~~~~~Dl~d~------~~~~~~~~~~~ 432 (676)
|+|||||||||||++|+++|+ .+|++| .++.+|++|+ +.++++ ++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~-- 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD-- 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC--
Confidence 589999999999999999999 467654 3456788873 345544 54
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC--CC
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED--KP 509 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~--~~ 509 (676)
+|+||||||.. +. ........++|+.++.+++++|++.++ +++++||..+|+.... + +.+++ .+
T Consensus 78 ~D~Vih~Aa~~---~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~------~~e~~~~~~ 144 (657)
T PRK07201 78 IDHVVHLAAIY---DL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-V------FREDDFDEG 144 (657)
T ss_pred CCEEEECceee---cC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-c------cccccchhh
Confidence 49999999965 22 123456789999999999999999876 6788888888864321 1 22222 12
Q ss_pred CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH---------------HHHHHHhcCceecc------CCC
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------------FITKISRYNKVVNI------PNS 568 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------------~~~~~~~~~~~~~~------~~~ 568 (676)
..+.+.|+.||+++|++++.. .+++++++||+++|||.. ++.++......... ..+
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVREE---CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN 221 (657)
T ss_pred cCCCCchHHHHHHHHHHHHHc---CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee
Confidence 334578999999999999753 478999999999999731 22222111111111 127
Q ss_pred ccchhhHHHHHHHHHhcC--CCceeEccCCCcccHHHHHHHHHhhcCCCC---cccccchHhhhhHh-------------
Q 005818 569 MTILDELLPISVEMAKRN--LSGIWNFTNPGVVSHNEILEMYKAYIDPGF---KWTNFTLEEQAKVI------------- 630 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~---~~~~~~~~~~~~~~------------- 630 (676)
++|++|+++++..+++.+ .+++||+++++++|+.|+++.+.+.+|.+. ....+|........
T Consensus 222 ~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 301 (657)
T PRK07201 222 IVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV 301 (657)
T ss_pred eeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH
Confidence 899999999999998764 346999999999999999999999999876 33334432100000
Q ss_pred ---cc--------CCCccccChhHHHhhC----CCCCCHHHHHHHhh
Q 005818 631 ---VA--------PRSNNELDASKLKKEF----PELLSIKESLIKNV 662 (676)
Q Consensus 631 ---~~--------~~~~~~ld~~k~~~~~----~~~~~~~~~l~~~~ 662 (676)
.. ......+|++|+++.+ ...|++++.+.+++
T Consensus 302 ~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~ 348 (657)
T PRK07201 302 ATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRLW 348 (657)
T ss_pred HHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHHH
Confidence 00 0113478999997765 23378888877755
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=216.44 Aligned_cols=214 Identities=13% Similarity=0.114 Sum_probs=167.6
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc--C
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV--K 432 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~--~ 432 (676)
...+|+|+|||||||||++++++|+++|++| .++.+|++|++.+.+++++. +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 3456799999999999999999999999765 24668999999999999864 4
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+|+||||++.. . ......+++|+.++.+++++|++.+++ +|++||.+++ .
T Consensus 137 ~D~Vi~~aa~~---~-----~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~---------------------~ 187 (390)
T PLN02657 137 VDVVVSCLASR---T-----GGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ---------------------K 187 (390)
T ss_pred CcEEEECCccC---C-----CCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc---------------------C
Confidence 69999998843 1 112345788999999999999999975 7777776654 1
Q ss_pred CCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-HHHHHHHhcCceeccCC------CccchhhHHHHHHHHHh
Q 005818 512 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVVNIPN------SMTILDELLPISVEMAK 584 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~~~~------~~~~v~D~a~~~~~~~~ 584 (676)
|...|..+|..+|+.+.. ...+++++++||+++|++. .++..+..+.+....++ .++|++|+|++++.++.
T Consensus 188 p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~ 265 (390)
T PLN02657 188 PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL 265 (390)
T ss_pred cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh
Confidence 235688999999999876 3468999999999999864 34444555555433332 46999999999999987
Q ss_pred cC--CCceeEccCC-CcccHHHHHHHHHhhcCCCCcccccchHh
Q 005818 585 RN--LSGIWNFTNP-GVVSHNEILEMYKAYIDPGFKWTNFTLEE 625 (676)
Q Consensus 585 ~~--~~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 625 (676)
.+ .+++||++++ +.+|+.|+++.+.+.+|.+.++..+|...
T Consensus 266 ~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~ 309 (390)
T PLN02657 266 DESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQI 309 (390)
T ss_pred CccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHH
Confidence 54 3479999986 68999999999999999887776666543
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=181.67 Aligned_cols=305 Identities=22% Similarity=0.275 Sum_probs=225.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC------CCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP------SRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~------~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
..|..||||-||.=|+.|++.|+.+ +++|.++-|....-...+... .......++..+|++|...+.+++..
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ 104 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST 104 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence 3467899999999999999999999 566666555443332222221 12234588899999999999999988
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 157 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 157 (676)
.+++-|+|+|+......+.+-++...++...|+..||++.+..+ .--||-..||...||...+.+. .|.+|..|.
T Consensus 105 ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQ---sE~TPFyPR 181 (376)
T KOG1372|consen 105 IKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQ---SETTPFYPR 181 (376)
T ss_pred cCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCc---ccCCCCCCC
Confidence 89999999999998888887777777888999999999998765 1247899999999998766544 789999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC--CCCChHH-HHHHHH----HCCCCceeecCCCceEeeeeHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEKLIP-KFILLA----MKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~--~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+||+.+|..+--++..|+..+++=++ -|.+|.... ...+|+. .+.+.. +..+.-...|+-+..|+|-|..
T Consensus 182 SPYa~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~ 258 (376)
T KOG1372|consen 182 SPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAG 258 (376)
T ss_pred ChhHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhH
Confidence 99999999988888888888876443 344444322 1123433 232222 2222334457888999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc----------------ceeeec--CCCCCCcccc
Q 005818 231 DVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT----------------QIKFVE--NRPFNDQRYF 292 (676)
Q Consensus 231 D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~----------------~~~~~~--~~~~~~~~~~ 292 (676)
|-++|++.+++++.+. -|.|..++..|++|+.+.-...+|..... .+...+ -+|.......
T Consensus 259 dYVEAMW~mLQ~d~Pd-DfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq 337 (376)
T KOG1372|consen 259 DYVEAMWLMLQQDSPD-DFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ 337 (376)
T ss_pred HHHHHHHHHHhcCCCC-ceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence 9999999999987655 68899999999999999877777743210 000000 1222333445
Q ss_pred cCHHHHHh-CCCcccCCHHHHHHHHHHH
Q 005818 293 LDVQKLKQ-LGWYERVTWEEGLQKTMKW 319 (676)
Q Consensus 293 ~~~~k~~~-lg~~~~~~~~~~l~~~~~~ 319 (676)
-|.+|+++ |||+|+.++.+.+++|+..
T Consensus 338 GdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 338 GDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred CChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 68899985 9999999999999999864
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-22 Score=184.48 Aligned_cols=265 Identities=18% Similarity=0.131 Sum_probs=179.8
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCceeeccccCC-----------ChHHHHHHhhccCCCEEEECccccCCCCcchhccch
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE-----------NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHK 455 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~-----------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 455 (676)
|+|||||||||++|+..|.+.||+|..+..+.. ..+.+.+..+. .+|+|||+||.... .-.|..+..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~-~~DavINLAG~~I~-~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTL-GIDAVINLAGEPIA-ERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccC-CCCEEEECCCCccc-cccCCHHHH
Confidence 689999999999999999999999866554322 23445555552 35999999996521 234777788
Q ss_pred hhHHhhhhhhHHHHHHHHHHcCC-cEEEeecC-eeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe
Q 005818 456 PETIRTNVVGTLTLADVCRENGL-LMMNYATG-CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV 533 (676)
Q Consensus 456 ~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 533 (676)
+..++..+..|..|.++..+... +-+++|.| .-|++... ...++|++ |.. .++-+..-..-|+....+ +.
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~-----~~~~tE~~-~~g-~~Fla~lc~~WE~~a~~a-~~ 150 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG-----DRVVTEES-PPG-DDFLAQLCQDWEEEALQA-QQ 150 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC-----ceeeecCC-CCC-CChHHHHHHHHHHHHhhh-hh
Confidence 89999999999999999987653 33555544 33443321 22245543 322 133333334445444443 45
Q ss_pred EEEEeeecccCCCCChH-HHHHHHHh------cCce--eccCCCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHH
Q 005818 534 CTLRVRMPISSDLNNPR-NFITKISR------YNKV--VNIPNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNE 603 (676)
Q Consensus 534 ~~l~~~~~r~~~~~g~~-~~~~~~~~------~~~~--~~~~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e 603 (676)
.+.|++.+|.+.|.++. .++.+++. |.+. -.++-+|+|++|+++++..++++. ..|.||+++|.+++.++
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~ 230 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHH
Confidence 78999999999999874 34433331 1111 122239999999999999999985 78999999999999999
Q ss_pred HHHHHHhhcCCCCcccccchHhhhhHhccCCC-----ccccChhHHHhhCCCC--CCHHHHHHHhhh
Q 005818 604 ILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRS-----NNELDASKLKKEFPEL--LSIKESLIKNVF 663 (676)
Q Consensus 604 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~ld~~k~~~~~~~~--~~~~~~l~~~~~ 663 (676)
|++.+.+.++.+.. .++|.... ........ ..+.=.+|+.+.++.+ ++++++|.+.+.
T Consensus 231 F~~al~r~l~RP~~-~~vP~~~~-rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 231 FAHALGRALHRPAI-LPVPSFAL-RLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred HHHHHHHHhCCCcc-ccCcHHHH-HHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 99999999997643 34443211 11111111 2344677888888876 799999998654
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.40 Aligned_cols=250 Identities=20% Similarity=0.215 Sum_probs=171.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc----ccC-CC-----CCCCCCCeEEEEecCC------CHH
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN----LKN-LN-----PSRLSPNFKFIKGDVA------SAD 71 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~-~~-----~~~~~~~v~~v~~Dl~------d~~ 71 (676)
++||+||||||+|++|+..|+.+-+ .+|+|+.|..+.+. ++. +. .+...++++.+.||+. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~-~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD-AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 4799999999999999999999853 69999999765221 111 11 2244678999999998 455
Q ss_pred HHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCC-CC
Q 005818 72 LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGN-HE 150 (676)
Q Consensus 72 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~-~e 150 (676)
.+.++. ..+|.|||+|+.++.-.++ .++..+||.||..+++.|...+ +|.|+|+||++|+........... ++
T Consensus 80 ~~~~La--~~vD~I~H~gA~Vn~v~pY---s~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~ 153 (382)
T COG3320 80 TWQELA--ENVDLIIHNAALVNHVFPY---SELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDE 153 (382)
T ss_pred HHHHHh--hhcceEEecchhhcccCcH---HHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccc
Confidence 577776 7899999999998854443 3677999999999999998854 899999999999876543322111 11
Q ss_pred C-----CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC----CCChHHHHHHHHHCCCCceeecCCC
Q 005818 151 A-----SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 151 ~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
. ....+.++|+.||+.+|.++++.... |+|++|+|||+|.|+... ...++..++..+..-..++- ..
T Consensus 154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~---~~ 229 (382)
T COG3320 154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD---SE 229 (382)
T ss_pred ccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC---cc
Confidence 1 22335688999999999999987766 999999999999998762 22456666666554433331 12
Q ss_pred ceEeeeeHHHHHH-----------HHHHHHhcCC-CCceEE-EcCCCcccHHHHHHHHHH
Q 005818 222 NVRSYLYCEDVAE-----------AFDTILHKGE-VGHVYN-IGTKKERRVIDVATDICK 268 (676)
Q Consensus 222 ~~~~~v~v~D~a~-----------ai~~~~~~~~-~~~~y~-i~~~~~~s~~el~~~i~~ 268 (676)
...+++.++.+++ ++..+..++. ....|+ ..-|..+.+.++.+.+.+
T Consensus 230 ~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 230 YSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 2233444333333 3333332221 112233 333677888888876665
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=174.51 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=222.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
..+||||||.|.+|..++..|........|++.|-.+.... -...-.++..|+.|...+++++...++|.+|
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~--------V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN--------VTDVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh--------hcccCCchhhhhhccccHHHhhcccccceee
Confidence 46999999999999999999998865666777666442221 1223357789999999999999888999999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+.+..+. ..+.+.....++|+.|..|+++.+++++ -++...|+++.||+.....+ ..+-+...|.+.||.||..
T Consensus 116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSPRNP--TPdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSPRNP--TPDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCCCCC--CCCeeeecCceeechhHHH
Confidence 99887653 2334555677899999999999999987 46667899999998765433 1233456789999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCC---CCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGP---NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
+|.+-..+..++|+++.++|++.+... |.....+...+...+++.+....+-.++.+..+.+..|+.++++.++..+
T Consensus 191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~ 270 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD 270 (366)
T ss_pred HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence 999999899999999999998777653 33333343444444444444566666778889999999999999888654
Q ss_pred C---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCC---CCcccccCHHHHH-hCCCcccCCHHHHHHHH
Q 005818 244 E---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF---NDQRYFLDVQKLK-QLGWYERVTWEEGLQKT 316 (676)
Q Consensus 244 ~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~ 316 (676)
. ...+||+.+ -+.|..|++..+.+.+ +.+.+.+.+.... +.....+|.+.++ ++.|+.++.+-.-+.-+
T Consensus 271 ~~~lkrr~ynvt~-~sftpee~~~~~~~~~---p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~ 346 (366)
T KOG2774|consen 271 SQSLKRRTYNVTG-FSFTPEEIADAIRRVM---PGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTV 346 (366)
T ss_pred HHHhhhheeeece-eccCHHHHHHHHHhhC---CCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHH
Confidence 3 357899985 6799999999999877 3344444332211 2234567777776 79999998888777777
Q ss_pred HHHHhhC
Q 005818 317 MKWYISN 323 (676)
Q Consensus 317 ~~~~~~~ 323 (676)
+.-.+.+
T Consensus 347 i~~~~~n 353 (366)
T KOG2774|consen 347 VAVHKSN 353 (366)
T ss_pred HHHHHhh
Confidence 7655543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.1e-22 Score=206.83 Aligned_cols=219 Identities=18% Similarity=0.249 Sum_probs=159.7
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCC--ce-----------------------------------eeccccCCC------hH
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGI--PF-----------------------------------EYGKGRLEN------RS 422 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~--~v-----------------------------------~~~~~Dl~d------~~ 422 (676)
+|+|||||||||++|+++|+++|+ +| .++.+|+++ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 489999999999999999999983 23 334567664 34
Q ss_pred HHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCC
Q 005818 423 QLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 423 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
.+..+.+++ |+|||+|+.. + . ........++|+.++.+++++|.+.+++ ++++||..+|+.....+
T Consensus 81 ~~~~~~~~~--d~vih~a~~~---~--~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~----- 147 (367)
T TIGR01746 81 EWERLAENV--DTIVHNGALV---N--W-VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLST----- 147 (367)
T ss_pred HHHHHHhhC--CEEEeCCcEe---c--c-CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCC-----
Confidence 556666655 9999999965 2 1 1234466789999999999999998875 88888888886532211
Q ss_pred CccccC----CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHh----cCceecc
Q 005818 502 GFKEED----KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISR----YNKVVNI 565 (676)
Q Consensus 502 ~~~~e~----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~----~~~~~~~ 565 (676)
..+++ .+..+.+.|+.||+.+|.+++.+.+. +++++++|++.++|+. .++.++.. .......
T Consensus 148 -~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~ 225 (367)
T TIGR01746 148 -VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDS 225 (367)
T ss_pred -ccccccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCC
Confidence 11111 11233578999999999999887543 8999999999999962 23333222 1111111
Q ss_pred ---CCCccchhhHHHHHHHHHhcCC----CceeEccCCCcccHHHHHHHHHhhcCCCCcccc
Q 005818 566 ---PNSMTILDELLPISVEMAKRNL----SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTN 620 (676)
Q Consensus 566 ---~~~~~~v~D~a~~~~~~~~~~~----~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 620 (676)
..+++|++|++++++.++..+. +++||+++++++++.|+++.+.+ .|.+.+..+
T Consensus 226 ~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~ 286 (367)
T TIGR01746 226 PELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVS 286 (367)
T ss_pred CccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCC
Confidence 2369999999999999987653 56999999999999999999999 887765433
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=193.94 Aligned_cols=235 Identities=16% Similarity=0.159 Sum_probs=170.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
.++||||||+|+||+++++.|+++ +++|++++|.... .+.+.. ....++.++++|++|.+++.+++.. .+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~--~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDA--LDDLKA-RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHH-hccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 6788888875421 111111 1134688999999999998877642 46
Q ss_pred CCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|+|||+||...... +.+++...++.|+.++.++++++ ++.+ ..+||++||.......
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------- 142 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY------------- 142 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC-------------
Confidence 899999999875432 22345578889999999999997 4444 6799999996543211
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCc---cCCCCCCC--------ChHHHHHHHHHCCCCceeecC
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNV---YGPNQFPE--------KLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i---~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 219 (676)
.+.+.|+.+|...|.+++.++++ +|++++++|||.+ ||++.... .....+.+.... ..+.+
T Consensus 143 -~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 217 (276)
T PRK06482 143 -PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAI--- 217 (276)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCC---
Confidence 13467999999999999988765 5899999999988 66543211 111122222222 22221
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g 271 (676)
+.+++|++++++.+++++..+..||+++++..++.++++.+.+.++
T Consensus 218 ------~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 218 ------PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ------CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 3578999999999998776677899999998999888887776664
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=178.06 Aligned_cols=297 Identities=20% Similarity=0.284 Sum_probs=211.1
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++.++-.+-|+|||||+|+.+++.|.+. |-+|++--|..... ...+........+-+...|+.|++++.+++ ...
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~-~r~lkvmGdLGQvl~~~fd~~DedSIr~vv--k~s 131 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYD-PRHLKVMGDLGQVLFMKFDLRDEDSIRAVV--KHS 131 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccc-hhheeecccccceeeeccCCCCHHHHHHHH--HhC
Confidence 3455667899999999999999999999 67787777754322 222233333456889999999999999999 778
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
.+|||+.|-.-. .....+.++|+.+.+.|.+.|++.| +.||||+|+-.. + ....+-|-.
T Consensus 132 NVVINLIGrd~e----Tknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lga---n-------------v~s~Sr~Lr 190 (391)
T KOG2865|consen 132 NVVINLIGRDYE----TKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGA---N-------------VKSPSRMLR 190 (391)
T ss_pred cEEEEeeccccc----cCCcccccccchHHHHHHHHHHhhC-hhheeehhhccc---c-------------ccChHHHHH
Confidence 899999986432 1223566889999999999999999 999999999541 1 111234999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC-ceEeeeeHHHHHHHHHHHHh
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS-NVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~ai~~~~~ 241 (676)
+|...|..+++... .++|+||..|||..+ +++........+=..+++++.|. ...+.++|-|+|++|+.++.
T Consensus 191 sK~~gE~aVrdafP----eAtIirPa~iyG~eD---rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk 263 (391)
T KOG2865|consen 191 SKAAGEEAVRDAFP----EATIIRPADIYGTED---RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK 263 (391)
T ss_pred hhhhhHHHHHhhCC----cceeechhhhcccch---hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc
Confidence 99999999987433 379999999999877 45555555555456678877764 45689999999999999998
Q ss_pred cCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCCC---ccee---------------eecCCCCCCc--------ccccC
Q 005818 242 KGE-VGHVYNIGTKKERRVIDVATDICKLFSLNPD---TQIK---------------FVENRPFNDQ--------RYFLD 294 (676)
Q Consensus 242 ~~~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~---~~~~---------------~~~~~~~~~~--------~~~~~ 294 (676)
.+. .|.+|..+++....+.||++.+.+.....+. ..++ +.+..|.+.. +..++
T Consensus 264 Dp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt 343 (391)
T KOG2865|consen 264 DPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLT 343 (391)
T ss_pred CccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcC
Confidence 765 6789999999999999999988765543221 1000 0111111111 11122
Q ss_pred -HHHHHhCCCcccCCHHHHHHHHHHHHhhCCCCccccccc
Q 005818 295 -VQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGA 333 (676)
Q Consensus 295 -~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 333 (676)
.-++.+||.++. +++..--+.+..|+....|++...+.
T Consensus 344 ~~~tleDLgv~~t-~le~~~~e~l~~yR~~~~~f~ae~~e 382 (391)
T KOG2865|consen 344 GAPTLEDLGVVLT-KLELYPVEFLRQYRKGGRYFGAEVGE 382 (391)
T ss_pred CCCcHhhcCceee-ecccccHHHHHHHhhcccchhhhhcc
Confidence 223456888854 77776667777677766666554433
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=177.95 Aligned_cols=271 Identities=21% Similarity=0.213 Sum_probs=212.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~ 433 (676)
.+..||||-||.=|++|++.|+..||+| ....+|++|...+.+++..++|
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 3578999999999999999999999865 6678999999999999999999
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC----CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG----LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~----~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+-|+|+|+.+ .+..+.+-|+-+.++...||+.||+|.+.++ +|+...|||..||.....| ..|.+|
T Consensus 108 tEiYnLaAQS---HVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~P-------QsE~TP 177 (376)
T KOG1372|consen 108 TEVYNLAAQS---HVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIP-------QSETTP 177 (376)
T ss_pred hhhhhhhhhc---ceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCC-------cccCCC
Confidence 9999999988 6888888888888999999999999999876 6888889999998776666 778889
Q ss_pred CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---HHHHHHH--------hc-CceeccCC-----Cccch
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NFITKIS--------RY-NKVVNIPN-----SMTIL 572 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~~~~~~--------~~-~~~~~~~~-----~~~~v 572 (676)
..|.++|+.+|..+-.++-+|.+.+++=.|--..+|--.|+ +|+.+-+ -+ ...+..++ +|-|.
T Consensus 178 FyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA 257 (376)
T KOG1372|consen 178 FYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA 257 (376)
T ss_pred CCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence 99999999999999888877777777666655555655664 4543322 11 12333343 99999
Q ss_pred hhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchH------------hhhhHhccCCC--ccc
Q 005818 573 DELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLE------------EQAKVIVAPRS--NNE 638 (676)
Q Consensus 573 ~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------~~~~~~~~~~~--~~~ 638 (676)
.|-++++..+++++.+..|-+.+++..|++||++.-....|....|..-... ...+...+|.. ...
T Consensus 258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq 337 (376)
T KOG1372|consen 258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ 337 (376)
T ss_pred HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence 9999999999999999999999999999999999999888866555321110 01111222222 112
Q ss_pred cChhHHHhhCCCCC--CHHHHHHHhhhc
Q 005818 639 LDASKLKKEFPELL--SIKESLIKNVFE 664 (676)
Q Consensus 639 ld~~k~~~~~~~~~--~~~~~l~~~~~~ 664 (676)
=|.+|+++.++|.| .+.+-+++++.+
T Consensus 338 GdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 338 GDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred CChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 29999988888774 788888777653
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-21 Score=234.50 Aligned_cols=255 Identities=18% Similarity=0.200 Sum_probs=183.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcC--CCcEEEEEcCCCccccc-cCC---------CCCCCCCCeEEEEecCCC-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNY--PEYKIVVLDKLDYCSNL-KNL---------NPSRLSPNFKFIKGDVAS----- 69 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~~v~~~~r~~~~~~~-~~~---------~~~~~~~~v~~v~~Dl~d----- 69 (676)
.++|||||||||||+++++.|++++ ..++|+++.|....... ..+ .......+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999986 56899999886432210 000 011112478999999974
Q ss_pred -HHHHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCc----
Q 005818 70 -ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA---- 144 (676)
Q Consensus 70 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~---- 144 (676)
.+.+.++. .++|+|||+|+..+... ....+..+|+.|+.+++++|+..+ +++|+|+||.++|+......
T Consensus 1051 ~~~~~~~l~--~~~d~iiH~Aa~~~~~~---~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443 1051 SDEKWSDLT--NEVDVIIHNGALVHWVY---PYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred CHHHHHHHH--hcCCEEEECCcEecCcc---CHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhh
Confidence 45566665 68999999999876432 233455689999999999999876 88999999999997422100
Q ss_pred -----CCCCCCC-----CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHC
Q 005818 145 -----VVGNHEA-----SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMK 210 (676)
Q Consensus 145 -----~~~~~e~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~ 210 (676)
.....|. ....+.+.|+.+|+.+|.++..+.+ .|++++++||+.|||++.... .++..++.....
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence 0001111 1223456799999999999998765 499999999999999965322 344444443332
Q ss_pred CCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCC
Q 005818 211 GKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDICKLFSL 272 (676)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~ 272 (676)
.. ...+..+.++|++|+|++++++.++.++. ...+||++++..+++.++++.+.+ +|.
T Consensus 1204 ~~---~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~ 1264 (1389)
T TIGR03443 1204 LG---LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGY 1264 (1389)
T ss_pred hC---CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCC
Confidence 22 22234556899999999999999987653 345899999989999999998865 354
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.3e-21 Score=204.87 Aligned_cols=181 Identities=15% Similarity=0.184 Sum_probs=137.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVD 449 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 449 (676)
|||+||||+||||++|+++|+++|++| .++.+|+.|+. +.+++.++ |+|||+|+.. .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al~~~--D~VIHLAa~~---~-- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELAGEA--DAVIHLAPVD---T-- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHhcCC--CEEEEcCccC---c--
Confidence 589999999999999999999999865 45678898874 77777766 9999999853 1
Q ss_pred hhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHH
Q 005818 450 WCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE 529 (676)
Q Consensus 450 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~ 529 (676)
. ....+|+.|+.|++++|++.++++|++||. ++. + ..|. .+|.++..
T Consensus 73 ---~---~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~----~-----------------~~~~----~aE~ll~~ 119 (699)
T PRK12320 73 ---S---APGGVGITGLAHVANAAARAGARLLFVSQA--AGR----P-----------------ELYR----QAETLVST 119 (699)
T ss_pred ---c---chhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCC----C-----------------cccc----HHHHHHHh
Confidence 1 122589999999999999999998888775 221 0 0122 47887754
Q ss_pred ccCeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCceeEccCCCcccHHH
Q 005818 530 YDNVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNE 603 (676)
Q Consensus 530 ~~~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e 603 (676)
+ .++++++|++++|||+ .++..++.... -...-.++||+|++++++.+++.+..|+||+++++.+|+.|
T Consensus 120 ~----~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~-~~~pI~vIyVdDvv~alv~al~~~~~GiyNIG~~~~~Si~e 194 (699)
T PRK12320 120 G----WAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKV-SARPIRVLHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVT 194 (699)
T ss_pred c----CCCEEEEeCceecCCCCcccHhHHHHHHHHHHH-cCCceEEEEHHHHHHHHHHHHhCCCCCEEEEeCCCeeEHHH
Confidence 3 4789999999999985 23333332110 00011347999999999999987767899999999999999
Q ss_pred HHHHHHhh
Q 005818 604 ILEMYKAY 611 (676)
Q Consensus 604 ~~~~i~~~ 611 (676)
+++.+...
T Consensus 195 l~~~i~~~ 202 (699)
T PRK12320 195 AWRLLRSV 202 (699)
T ss_pred HHHHHHHh
Confidence 99998775
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-21 Score=189.59 Aligned_cols=232 Identities=16% Similarity=0.076 Sum_probs=158.5
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
..+++++||||||+|+||+++++.|+++ +++|++++|...... .+.+ .....++.++++|++|.+.+.+++..
T Consensus 3 ~~~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 3 SNLNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEI--NKAGGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHH--HhcCceEEEEECCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999 567888877642110 1111 11134578899999999998877643
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHH----HHHHHHHH-HHcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYG----THVLLEAC-KITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~----~~~ll~a~-~~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+|+..... ...+++...++.|+.+ +.++++++ +..+ .++||++||...+...
T Consensus 79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~------ 151 (262)
T PRK13394 79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS------ 151 (262)
T ss_pred HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC------
Confidence 3589999999986432 2333455778899999 66677777 5544 7899999996443221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCC---CCceeecCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG---KPLPIHGDG 220 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 220 (676)
.+...|+.+|...+.+++.++++ .+++++++||+.++++... ..+.......... ....++..+
T Consensus 152 --------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T PRK13394 152 --------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD--KQIPEQAKELGISEEEVVKKVMLGK 221 (262)
T ss_pred --------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh--hhhHhhhhccCCChHHHHHHHHhcC
Confidence 12356999999999999888766 4899999999999998542 1111111000000 000011223
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...++|++++|++++++.+++... .++.|++.++.
T Consensus 222 ~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 222 TVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 344689999999999999997543 36788888764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=182.13 Aligned_cols=226 Identities=20% Similarity=0.174 Sum_probs=161.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.. |++++||||||||+||++|+++|+++ +++|+++.+...... ..+. ......+++++.+|+.|++.+.++++
T Consensus 1 ~~~-~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (249)
T PRK12825 1 MGS-LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAA-EELVEAVEALGRRAQAVQADVTDKAALEAAVA 76 (249)
T ss_pred CCC-CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHH-HHHHHHHHhcCCceEEEECCcCCHHHHHHHHH
Confidence 544 45679999999999999999999999 567666555432110 0000 01123468899999999999888774
Q ss_pred c-----CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|+|||+|+...... ..+++...++.|+.++.++++++ ++.+ .++||++||...+.+..
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~---- 151 (249)
T PRK12825 77 AAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP---- 151 (249)
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC----
Confidence 3 37899999999764432 33445678899999999999887 3444 78999999977764322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+++.+++. .+++++++|||.++|+..... ........ ....+
T Consensus 152 ----------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~-~~~~~~~~---~~~~~------- 210 (249)
T PRK12825 152 ----------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT-IEEAREAK---DAETP------- 210 (249)
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc-cchhHHhh---hccCC-------
Confidence 2346999999999999887665 589999999999999876322 11111111 00111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
...+++.+|+++++..++++.. .+++|+++++..
T Consensus 211 ~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~ 247 (249)
T PRK12825 211 LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVD 247 (249)
T ss_pred CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence 1138999999999999997642 578999998754
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.9e-20 Score=183.21 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=153.7
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----CC-CC
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----EK-ID 83 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~~-~d 83 (676)
+||||||||+||+++++.|+++ +++|++++|..... ...+++.+.+|+.|++.+..++.. .+ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~---------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSS---------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccc---------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 4899999999999999999999 57788888864321 123677889999999999998832 35 89
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
.|+|+++... . ......+++++|++.| +++||++||..++... ..
T Consensus 70 ~v~~~~~~~~-----~--------~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~---------------------~~ 114 (285)
T TIGR03649 70 AVYLVAPPIP-----D--------LAPPMIKFIDFARSKG-VRRFVLLSASIIEKGG---------------------PA 114 (285)
T ss_pred EEEEeCCCCC-----C--------hhHHHHHHHHHHHHcC-CCEEEEeeccccCCCC---------------------ch
Confidence 9999986432 1 1234578999999988 9999999996543210 01
Q ss_pred HHHHHHHHHHHHHH-cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 164 KAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 164 K~~~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
+...|+++ ++ .|++++++||+++++.... . .....+.....+ +.+.++..++|++++|+++++..++..
T Consensus 115 ~~~~~~~l----~~~~gi~~tilRp~~f~~~~~~--~---~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~ 184 (285)
T TIGR03649 115 MGQVHAHL----DSLGGVEYTVLRPTWFMENFSE--E---FHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTD 184 (285)
T ss_pred HHHHHHHH----HhccCCCEEEEeccHHhhhhcc--c---ccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcC
Confidence 22334433 33 4899999999998854311 1 111222233333 335577888999999999999999987
Q ss_pred CC-CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005818 243 GE-VGHVYNIGTKKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 243 ~~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~ 274 (676)
+. .++.|++++++.+|+.|+++.+.+.+|++.
T Consensus 185 ~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v 217 (285)
T TIGR03649 185 KVAPNTDYVVLGPELLTYDDVAEILSRVLGRKI 217 (285)
T ss_pred CCcCCCeEEeeCCccCCHHHHHHHHHHHhCCce
Confidence 54 567899999999999999999999999854
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=181.11 Aligned_cols=237 Identities=14% Similarity=0.058 Sum_probs=168.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|..... ..+. ......+.++++|++|++++.+++..
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATL--ADLA-EKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH-HhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 45679999999999999999999999 67888888864221 1111 11134678899999999998777643
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ .+++|++||...+.+...
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~--------- 145 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPM--------- 145 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCC---------
Confidence 3789999999986542 244566788999999998888776 3444 679999999776654332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC-------ChHHHHHHHHHCCCCceeecCCC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
...|+.+|...+.+++.++.+ +|++++++|||.+..+..... .....+....... .
T Consensus 146 -----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 211 (275)
T PRK08263 146 -----SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------W 211 (275)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------H
Confidence 346999999999999887765 589999999999877643210 0111111111110 0
Q ss_pred ceEee-eeHHHHHHHHHHHHhcCCCCceEEEc-CCCcccHHHHHHHHHHHh
Q 005818 222 NVRSY-LYCEDVAEAFDTILHKGEVGHVYNIG-TKKERRVIDVATDICKLF 270 (676)
Q Consensus 222 ~~~~~-v~v~D~a~ai~~~~~~~~~~~~y~i~-~~~~~s~~el~~~i~~~~ 270 (676)
....+ ++++|++++++.+++.+.....|.++ ++..+++.++.+.+.++-
T Consensus 212 ~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 212 SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE 262 (275)
T ss_pred HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence 11235 78999999999999987655555554 446788999998888753
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=178.87 Aligned_cols=227 Identities=16% Similarity=0.157 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC---CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN---PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.++||||||+|+||++++++|+++ +++|++++|..... .+.+. .......+.++.+|++|.+.+..++..
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAE-ADALAAELNALRPGSAAALQADLLDPDALPELVAACV 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHH-HHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999 68888888753211 00000 011123578899999999998887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++... ..-..++++||.. +
T Consensus 81 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~ 146 (249)
T PRK09135 81 AAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--------------A 146 (249)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--------------h
Confidence 3689999999975422 123345678899999999999998642 1123566665521 1
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
..+..|.+.|+.+|..+|.+++.+++++ +++++++||+.++|+.... .+...+......+.++. .+.+
T Consensus 147 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~ 216 (249)
T PRK09135 147 ERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN-SFDEEARQAILARTPLK---------RIGT 216 (249)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc-cCCHHHHHHHHhcCCcC---------CCcC
Confidence 2234567789999999999999988775 5999999999999997632 22223333333333221 1235
Q ss_pred HHHHHHHHHHHHhc-C-CCCceEEEcCCCccc
Q 005818 229 CEDVAEAFDTILHK-G-EVGHVYNIGTKKERR 258 (676)
Q Consensus 229 v~D~a~ai~~~~~~-~-~~~~~y~i~~~~~~s 258 (676)
++|+++++..++.. . ..+++||++++..++
T Consensus 217 ~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 217 PEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 89999999666543 2 257889999987654
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=182.01 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=170.3
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...|+.++||||||+|+||++++++|+++ +++|++.+|...... ...+.......++.++.+|+.|++++.++++
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVD 78 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHH
Confidence 344566799999999999999999999999 678888887642211 0111111112468889999999999887774
Q ss_pred c-----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|+|||+|+.... ....+++...++.|+.++.++++++.... ...+||++||...+....
T Consensus 79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 154 (276)
T PRK05875 79 AATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR---- 154 (276)
T ss_pred HHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC----
Confidence 3 278999999986432 12233456778899999999998765421 135899999977653321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+.+.|+.+|...|.+++.++++. +++++++|||.+.++...................+
T Consensus 155 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--------- 215 (276)
T PRK05875 155 ----------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP--------- 215 (276)
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------
Confidence 24579999999999999887764 69999999999987644211111111112211111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc----cHHHHHHHHHHHhC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKER----RVIDVATDICKLFS 271 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~----s~~el~~~i~~~~g 271 (676)
...+.+++|+++++..+++.+. .+++|+++++..+ ++.|+++.+....+
T Consensus 216 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 216 LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 1246789999999999997654 3788999988765 77777776665443
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-20 Score=170.43 Aligned_cols=183 Identities=25% Similarity=0.341 Sum_probs=141.8
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEcc
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFA 89 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a 89 (676)
|+|+||||++|+.+++.|+++ +++|+++.|+...... ..+++++++|+.|++.+.+++ .++|+|||++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAAL--KGADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHH--TTSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhh--hhcchhhhhh
Confidence 799999999999999999999 5899999987542211 568999999999999999999 7999999999
Q ss_pred ccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005818 90 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 169 (676)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 169 (676)
+.... +...+.++++++++.+ +++||++||.++|+........ . .......|...|..+|+
T Consensus 69 ~~~~~-------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~e~ 129 (183)
T PF13460_consen 69 GPPPK-------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSD----E-DKPIFPEYARDKREAEE 129 (183)
T ss_dssp HSTTT-------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEG----G-TCGGGHHHHHHHHHHHH
T ss_pred hhhcc-------------cccccccccccccccc-cccceeeeccccCCCCCccccc----c-cccchhhhHHHHHHHHH
Confidence 75432 2777899999999987 9999999999999865543110 0 01111468888988887
Q ss_pred HHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 170 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 170 ~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
+++ +.+++++++||+.+||+......++. ..+....++|+.+|+|++++.++++
T Consensus 130 ~~~----~~~~~~~ivrp~~~~~~~~~~~~~~~---------------~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 130 ALR----ESGLNWTIVRPGWIYGNPSRSYRLIK---------------EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHH----HSTSEEEEEEESEEEBTTSSSEEEES---------------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHH----hcCCCEEEEECcEeEeCCCcceeEEe---------------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 774 35899999999999998753211110 1233445899999999999998864
|
... |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=177.82 Aligned_cols=223 Identities=17% Similarity=0.103 Sum_probs=160.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||.+++++|+++ +++|++++|...... ...+ ......+.++.+|+.|++++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELV--EAAGGKARARQVDVRDRAALKAAVAAGVE 79 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 55689999999999999999999999 678888888632110 0111 11123588999999999998888743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+++.... ....+++...++.|+.++.++++++. +.+ .++||++||...++..
T Consensus 80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~--------- 149 (251)
T PRK12826 80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG--------- 149 (251)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC---------
Confidence 279999999988764 33444566789999999999998874 333 6789999997665111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
..+...|+.+|..++.+++.++.+ .+++++++||+.++|+....... ..+........++ ..+
T Consensus 150 ----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~ 215 (251)
T PRK12826 150 ----YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPL---------GRL 215 (251)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCC---------CCC
Confidence 112456999999999999887665 48999999999999986532111 1111222222221 148
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
++++|+++++..++.... .+++|++.+|.
T Consensus 216 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 216 GEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred cCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 899999999999886542 57889998764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=194.68 Aligned_cols=219 Identities=13% Similarity=0.102 Sum_probs=153.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCc------------------------------------------------eeec
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIP------------------------------------------------FEYG 414 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~------------------------------------------------v~~~ 414 (676)
..++|||||||||||++|++.|++.+.+ +..+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 3578999999999999999999986532 2346
Q ss_pred cccCCCh------HHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecC
Q 005818 415 KGRLENR------SQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATG 486 (676)
Q Consensus 415 ~~Dl~d~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~ 486 (676)
.+|++++ +..+.+.+. +|+|||+|+.. + ...+++..+++|+.|+.+++++|++.+ . ++||+||.
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v---~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKE--VDVIINSAANT---T---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhc--CCEEEECcccc---c---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 7899876 345555554 59999999965 2 124577889999999999999998874 4 57888999
Q ss_pred eeeecCCCCCCCCCCCcc--c--------------------------------c--CC---------C--------CCCC
Q 005818 487 CIFEYDAKHPEGTGIGFK--E--------------------------------E--DK---------P--------NFTG 513 (676)
Q Consensus 487 ~v~~~~~~~~~~~~~~~~--~--------------------------------e--~~---------~--------~~p~ 513 (676)
+||+.......+. .|. + + .. . ..-.
T Consensus 270 yVyG~~~G~i~E~--~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~p 347 (605)
T PLN02503 270 YVNGQRQGRIMEK--PFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQ 347 (605)
T ss_pred eeecCCCCeeeee--ecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCC
Confidence 9998653111111 110 0 0 00 0 1112
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCC----------CChH-----HHHHHHHhcCceeccCC-----Cccchh
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDL----------NNPR-----NFITKISRYNKVVNIPN-----SMTILD 573 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~----------~g~~-----~~~~~~~~~~~~~~~~~-----~~~~v~ 573 (676)
|.|..+|.+||++++... .+++++++||+.| +++. ..+....++.-..-.++ +.++||
T Consensus 348 NtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD 425 (605)
T PLN02503 348 DTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPAD 425 (605)
T ss_pred ChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeec
Confidence 789999999999998764 3799999999998 3332 11111112211111122 889999
Q ss_pred hHHHHHHHHHhc-C-----CCceeEccCC--CcccHHHHHHHHHhhcC
Q 005818 574 ELLPISVEMAKR-N-----LSGIWNFTNP--GVVSHNEILEMYKAYID 613 (676)
Q Consensus 574 D~a~~~~~~~~~-~-----~~g~yn~~~~--~~~s~~e~~~~i~~~~g 613 (676)
.|+.+++.++.. . ...+||++++ +++++.++.+.+.+.+.
T Consensus 426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~ 473 (605)
T PLN02503 426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK 473 (605)
T ss_pred HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence 999999988432 1 2359999998 99999999999998664
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-19 Score=173.68 Aligned_cols=229 Identities=20% Similarity=0.232 Sum_probs=154.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCC-HHHHHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS-ADLVHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~~~~~~~~~~~d~ 84 (676)
.+|+||||||||+||+.+++.|+++ +++|+++.|...... .... ...+++++++|+.| .+.+.+.+. .++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~--~~~~--~~~~~~~~~~Dl~d~~~~l~~~~~-~~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAK--TSLP--QDPSLQIVRADVTEGSDKLVEAIG-DDSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHH--Hhcc--cCCceEEEEeeCCCCHHHHHHHhh-cCCCE
Confidence 3579999999999999999999998 678888777642211 1111 13468999999998 455655551 37999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC-CCCCCCChhHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA-SQLLPTNPYSAT 163 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-~~~~p~~~Y~~s 163 (676)
|||+++..... ++...+..|..++.++++++++.+ +++||++||.++|+...+.+. .+. ....+...|..+
T Consensus 89 vi~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~---~~~~~~~~~~~~~~~~ 160 (251)
T PLN00141 89 VICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQIL---NPAYIFLNLFGLTLVA 160 (251)
T ss_pred EEECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCccccc---CcchhHHHHHHHHHHH
Confidence 99998864211 112234678889999999999877 899999999999986543221 010 011122234456
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|..+|++++ +.+++++++||+++++.... +. +.+.........+++.+|+|++++.++..+
T Consensus 161 k~~~e~~l~----~~gi~~~iirpg~~~~~~~~--------------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~ 221 (251)
T PLN00141 161 KLQAEKYIR----KSGINYTIVRPGGLTNDPPT--------------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLCP 221 (251)
T ss_pred HHHHHHHHH----hcCCcEEEEECCCccCCCCC--------------ce-EEECCCCccccCcccHHHHHHHHHHHhcCh
Confidence 777777654 35899999999999986431 10 111111111225799999999999999876
Q ss_pred C-CCceEEEcCCC---cccHHHHHHHHHH
Q 005818 244 E-VGHVYNIGTKK---ERRVIDVATDICK 268 (676)
Q Consensus 244 ~-~~~~y~i~~~~---~~s~~el~~~i~~ 268 (676)
. .+.++.+.+.+ ..++.+++..+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 222 ESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred hhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 5 45677777633 3788888877654
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=175.14 Aligned_cols=225 Identities=17% Similarity=0.208 Sum_probs=157.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-KNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|...|+++++|||||+|+||+++++.|+++ +++|++.+|....... ..+ ......+.++.+|++|.+++.+++..
T Consensus 2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK12823 2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAEL--RAAGGEALALTADLETYAGAQAAMAA 77 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHH--HhcCCeEEEEEEeCCCHHHHHHHHHH
Confidence 445577899999999999999999999999 6788888885321110 001 11134578899999999888777643
Q ss_pred -----CCCCEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 80 -----EKIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|++||+|+... ...+.+++...++.|+.++..+++.+. +.+ ..+||++||...++..
T Consensus 78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~----- 151 (260)
T PRK12823 78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGIN----- 151 (260)
T ss_pred HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCCC-----
Confidence 37999999998532 123344556778899988876655443 434 5689999998765321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC-----------CCChHHHHHHHHHCC
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF-----------PEKLIPKFILLAMKG 211 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~-----------~~~~~~~~~~~~~~~ 211 (676)
..+|+.+|...+.+++.++.++ |+++.+++||.+++|... .....+.+......+
T Consensus 152 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (260)
T PRK12823 152 -----------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDS 220 (260)
T ss_pred -----------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhcc
Confidence 2359999999999999887765 899999999999997420 012233333333333
Q ss_pred CCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 212 KPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 212 ~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.++. .+.+++|++++++.++.... .++.|++.+++
T Consensus 221 ~~~~---------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 221 SLMK---------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred CCcc---------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 3221 35578999999999886432 56788887764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=177.29 Aligned_cols=226 Identities=18% Similarity=0.160 Sum_probs=155.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||++++++|+++ +++|++++|..... +.+.. .....++.++.+|+.|++++..++..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGA--EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999 67898888864211 11110 11234688999999999977665532
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+...... ..++....++.|+.++..+++++ ++.+ .++||++||...+.+...
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~--------- 146 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPF--------- 146 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCC---------
Confidence 46899999999765322 22234567789999988888877 4444 689999999766544321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCc-----eeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPL-----PIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (676)
...|+.+|...+.+++.++.+ .+++++++||+.++++... +.+...... .+... .....+...
T Consensus 147 -----~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 217 (255)
T TIGR01963 147 -----KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE--KQIADQAKT--RGIPEEQVIREVMLPGQPT 217 (255)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH--HHHHhhhcc--cCCCchHHHHHHHHccCcc
Confidence 246999999999999877664 3899999999999987531 111110000 00000 001123345
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+++++++|++++++.+++.. ..++.|++.++.
T Consensus 218 ~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 218 KRFVTVDEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred ccCcCHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 67999999999999999753 246789998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.6e-19 Score=175.11 Aligned_cols=223 Identities=17% Similarity=0.142 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+.+++||||||+|+||++++++|+++ +++|++.+|+.... ..... .....++.++.+|++|++++.++++.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKC--EELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34579999999999999999999999 67888877753211 11000 11124578899999999999877743
Q ss_pred --CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+...... +.+++...++.|+.++.++++++... ....+||++||...|.+..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP--------- 154 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------
Confidence 36899999999764322 22344566799999999999886521 1246899999987765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCC-CC-CCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN-QF-PEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.+++.. |++++++|||.+.++. .. ....+..+....... + +...+.
T Consensus 155 -----~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~ 222 (274)
T PRK07775 155 -----HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDY 222 (274)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-cccccc
Confidence 23469999999999999987654 8999999999885542 21 111122222221110 0 112346
Q ss_pred eeeHHHHHHHHHHHHhcCCCCceEEEc
Q 005818 226 YLYCEDVAEAFDTILHKGEVGHVYNIG 252 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~~~~~y~i~ 252 (676)
+++++|++++++.+++++..+.+||+.
T Consensus 223 ~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 223 FLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred ccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 899999999999999877656678875
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.6e-19 Score=177.45 Aligned_cols=231 Identities=15% Similarity=0.126 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|....... ..........+++++.+|++|++++.. +..
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~ 77 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK 77 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence 45678999999999999999999999 6788888876422110 001111123468999999999998876 422
Q ss_pred --CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+...... +.+++...+..|+.++.++++++ ++.+ ..+||++||...+.+..
T Consensus 78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~-------- 148 (280)
T PRK06914 78 EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFP-------- 148 (280)
T ss_pred hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCC--------
Confidence 36899999998765322 23345567889999999998885 4444 67999999954432211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHH---HHcCCCEEEEeeCCccCCCCCCC-----------ChHHHHHHHHHCCCCce
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYG---RSYGLPVITTRGNNVYGPNQFPE-----------KLIPKFILLAMKGKPLP 215 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~ilR~~~i~G~~~~~~-----------~~~~~~~~~~~~~~~~~ 215 (676)
+...|+.+|...+.+++.++ ..+|++++++|||.+.++..... ............. +
T Consensus 149 ------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 219 (280)
T PRK06914 149 ------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I- 219 (280)
T ss_pred ------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H-
Confidence 24569999999999998876 34589999999999988742110 0111111111100 0
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHH
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVI 260 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~ 260 (676)
. .....+++++|+|++++.+++++.....|+++++..+++.
T Consensus 220 --~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 220 --N--SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred --h--hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 0 0123578899999999999998776667999877655544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=173.81 Aligned_cols=227 Identities=12% Similarity=0.082 Sum_probs=153.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|..... ..+.. ....++..+.+|+.|++++.+++..
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~--~~l~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAAR--ADFEA-LHPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHH--HHHHh-hcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 45688999999999999999999999 67888888864211 11111 1234688899999999998877643
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+...... +.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~---------- 145 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP---------- 145 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC----------
Confidence 26899999999865322 223345678999999999999854 333 57899999976553322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC-----CChHHHHHHHHHCCCCceeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...|.+++.++.+ +|++++++|||.+.++.... ...+..................+
T Consensus 146 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (277)
T PRK06180 146 ----GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG--- 218 (277)
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---
Confidence 2456999999999999887765 48999999999997763211 01111111100000000000011
Q ss_pred EeeeeHHHHHHHHHHHHhcCCCCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGEVGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~ 254 (676)
..+..++|++++++.+++.+.....|.++..
T Consensus 219 ~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~ 249 (277)
T PRK06180 219 KQPGDPAKAAQAILAAVESDEPPLHLLLGSD 249 (277)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence 1356799999999999987765555655433
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=160.18 Aligned_cols=261 Identities=16% Similarity=0.171 Sum_probs=194.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHc-CCc-------------e----eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKK-GIP-------------F----EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~-g~~-------------v----~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
||+|||+-|.+|..++..|..+ |.+ | .++..|+.|.+.+++.+-+.++|.+||..+.-.
T Consensus 46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS--- 122 (366)
T KOG2774|consen 46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS--- 122 (366)
T ss_pred eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHHH---
Confidence 8999999999999999988776 321 1 677889999999999988889999999998641
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCC-CCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAK-HPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~-~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
...+.+-....++|+.|..|+++.|+++..++++.||...||-.+. .| +.+-+...|.+.||.||.-||.+
T Consensus 123 -AvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNP-------TPdltIQRPRTIYGVSKVHAEL~ 194 (366)
T KOG2774|consen 123 -AVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNP-------TPDLTIQRPRTIYGVSKVHAELL 194 (366)
T ss_pred -HhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCC-------CCCeeeecCceeechhHHHHHHH
Confidence 1225666678899999999999999999999999999999985433 22 44444557889999999999999
Q ss_pred HHHccCeEEEEeeecccCCCCCh-----H------HHHHHHHhcCceecc--CC---CccchhhHHHHHHHHHhcC----
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNP-----R------NFITKISRYNKVVNI--PN---SMTILDELLPISVEMAKRN---- 586 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~-----~------~~~~~~~~~~~~~~~--~~---~~~~v~D~a~~~~~~~~~~---- 586 (676)
-..+...+++++..+|.+.+... + ......++.+....+ ++ .+.|..||.++++..+..+
T Consensus 195 GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~l 274 (366)
T KOG2774|consen 195 GEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSL 274 (366)
T ss_pred HHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHh
Confidence 99888889999999999887732 1 122233333332211 12 7889999999999998876
Q ss_pred CCceeEccCCCcccHHHHHHHHHhhc-CCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCCCHH-HHHHHhhh
Q 005818 587 LSGIWNFTNPGVVSHNEILEMYKAYI-DPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIK-ESLIKNVF 663 (676)
Q Consensus 587 ~~g~yn~~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~~~~-~~l~~~~~ 663 (676)
...+||+.+ -.+|-.|++..+.+.+ |..+.+.+.......+.|. ..+|.+.++..+.|..++. -.+.+++.
T Consensus 275 krr~ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp-----~~~dds~ar~~wh~~h~~~l~~~i~~~i 347 (366)
T KOG2774|consen 275 KRRTYNVTG-FSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWP-----MSLDDSEARTEWHEKHSLHLLSIISTVV 347 (366)
T ss_pred hhheeeece-eccCHHHHHHHHHhhCCCceeecccchhhhhhhhcc-----cccCchhHhhHHHHhhhhhHHHHHHHHH
Confidence 336999886 8999999999999987 3444444443333333333 3589999988887774332 23444443
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-20 Score=178.91 Aligned_cols=214 Identities=16% Similarity=0.158 Sum_probs=145.3
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCC-----------------------------------ceeeccccCC------ChHHH
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGI-----------------------------------PFEYGKGRLE------NRSQL 424 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~-----------------------------------~v~~~~~Dl~------d~~~~ 424 (676)
+||+||||||+|++|+.+|+.+-. +|+.+.+|+. +...+
T Consensus 2 ~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~ 81 (382)
T COG3320 2 NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTW 81 (382)
T ss_pred eEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHH
Confidence 699999999999999999998763 3578888988 56778
Q ss_pred HHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCc
Q 005818 425 LADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 425 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
..+.+.+ |.|||+||.. ++ .....+....||.||.++++.|.....| +.|+||.+|+....... ....+
T Consensus 82 ~~La~~v--D~I~H~gA~V-----n~-v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~--~~~~~ 151 (382)
T COG3320 82 QELAENV--DLIIHNAALV-----NH-VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSN--FTVDF 151 (382)
T ss_pred HHHhhhc--ceEEecchhh-----cc-cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCC--Ccccc
Confidence 8888877 9999999965 22 2344577899999999999999988776 66777777775432211 11111
Q ss_pred cccC----CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcC----cee--cc
Q 005818 504 KEED----KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYN----KVV--NI 565 (676)
Q Consensus 504 ~~e~----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~----~~~--~~ 565 (676)
.+++ ....+.++|++|||.+|.+++...+. |+|++++||+.+-|.. +|+.++..+- ... ..
T Consensus 152 ~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~ 230 (382)
T COG3320 152 DEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEY 230 (382)
T ss_pred ccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCccc
Confidence 1111 11234588999999999999998765 9999999999998764 4555554432 211 11
Q ss_pred CCCccchhhHHHH-----------HHHHHhcCC--CceeE-ccCCCcccHHHHHHHHHh
Q 005818 566 PNSMTILDELLPI-----------SVEMAKRNL--SGIWN-FTNPGVVSHNEILEMYKA 610 (676)
Q Consensus 566 ~~~~~~v~D~a~~-----------~~~~~~~~~--~g~yn-~~~~~~~s~~e~~~~i~~ 610 (676)
.-+...++.++++ +..+..++. -..|+ ..-|..+.+.++.+++.+
T Consensus 231 ~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 231 SLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred chhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 1133333333332 222222221 13444 334889999999999988
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=175.75 Aligned_cols=229 Identities=17% Similarity=0.108 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|.+++||||||+|+||++++++|+++ +++|++++|.................+++.+.+|+.|++++.+++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 67888888864321100000011235688999999999998887743
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+...... +.++....++.|+.++.++++.+ ++.+ .++||++||...+.+..
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~---------- 148 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA---------- 148 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC----------
Confidence 37999999999765422 22334456778999865555544 4444 78999999965543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCc-----eeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPL-----PIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (676)
+.+.|+.+|...+.+.+.++.+ .+++++++|||.++++.... .+...... .+... ..+......
T Consensus 149 ----~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 220 (258)
T PRK12429 149 ----GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKE--RGISEEEVLEDVLLPLVPQ 220 (258)
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccc--cCCChHHHHHHHHhccCCc
Confidence 2456999999999998877665 37999999999999876421 11110000 00000 011122233
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+.+++++|++++++.++.... .++.|++.++
T Consensus 221 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 221 KRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred cccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 579999999999999986532 3678888876
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=172.05 Aligned_cols=222 Identities=18% Similarity=0.140 Sum_probs=159.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||++++++|+++ +++|++++|..... ..+.. .....++..+.+|++|.+++..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGA--ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67888888864211 01100 01123577899999999998776643
Q ss_pred --CCCCEEEEccccCCc-------CCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++...- +..+||++||...|..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------- 151 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------- 151 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC--------
Confidence 268999999997531 22334455778999999999999887531 2469999999877632
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
.+.|+.+|...|.+++.+++++ ++++++++||.+..+..... ....+.+...++.+..
T Consensus 152 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~--------- 212 (250)
T PRK07774 152 ---------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV-TPKEFVADMVKGIPLS--------- 212 (250)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc-CCHHHHHHHHhcCCCC---------
Confidence 3469999999999999987764 79999999999987764321 1122333344333221
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+.+++|++++++.++... ..+++|++.++..+
T Consensus 213 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 213 RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 2457899999999988753 25788999988654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=172.49 Aligned_cols=224 Identities=19% Similarity=0.188 Sum_probs=157.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
.++||||||+|+||++++++|+++ +++|++++|............ .....++.++.+|++|++++.++++. .
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999 678888887542111000000 01134689999999999988777642 3
Q ss_pred CCCEEEEccccCCcC------CcCCChHHHHHHHHHHHHHHHHHHHHc----CC-----CceEEEEecccccCCCCCCcC
Q 005818 81 KIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKIT----GQ-----IKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~-----~~~~v~~SS~~vyg~~~~~~~ 145 (676)
++|+|||+|+..... .+.+++...++.|+.++.++++++... .. ..+||++||...+.+..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 155 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP---- 155 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence 789999999875421 233456678999999999999887542 11 46799999966543322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...|.+++.++.+ +|+++++++||.+.++.... ....+.+....+. .+
T Consensus 156 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~--~~~~~~~~~~~~~-~~------- 215 (256)
T PRK12745 156 ----------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP--VTAKYDALIAKGL-VP------- 215 (256)
T ss_pred ----------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc--cchhHHhhhhhcC-CC-------
Confidence 2346999999999999988764 58999999999999875421 2122222222211 11
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+.+.+|+++++..++... ..+..|++.++..
T Consensus 216 ~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 216 MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence 124779999999999888643 2577899988753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=175.68 Aligned_cols=228 Identities=15% Similarity=0.116 Sum_probs=160.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++..+.......+... ......++.++.+|++|.+++.+++..
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 56777665532211111110 011234578899999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...+++|+.++.++++++... ..-.+||++||...|.....
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------- 201 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT--------- 201 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC---------
Confidence 379999999997432 2344567789999999999999998753 11258999999887754332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ +|+++.+++||.+.++...................+ ...+.+
T Consensus 202 -----~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ 267 (300)
T PRK06128 202 -----LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQ 267 (300)
T ss_pred -----chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcC
Confidence 235999999999999988776 489999999999999864221111222222222211 113668
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKKER 257 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~ 257 (676)
.+|++.+++.++.... .++.|++.+|..+
T Consensus 268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 8999999998886532 4788999887543
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=183.07 Aligned_cols=223 Identities=13% Similarity=0.042 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|..... +.... .....++.++.+|++|.+++.+++..
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~ 79 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDAL--DRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE 79 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67888888853211 11100 11134678899999999999887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCC-----CceEEEEecccccCCCCCCc
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQ-----IKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~-----~~~~v~~SS~~vyg~~~~~~ 144 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ .+.+. ..++|++||...+.+..
T Consensus 80 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 156 (287)
T PRK06194 80 RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP--- 156 (287)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence 2689999999986542 233455667899999999977763 33331 15899999976664332
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC-----CCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-----LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
+...|+.+|...|.+++.++.+++ +++..+.||.+..+-. ....+.+..+.++
T Consensus 157 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~-----------~~~~~~~~~~~~~ 214 (287)
T PRK06194 157 -----------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW-----------QSERNRPADLANT 214 (287)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc-----------cccccCchhcccC
Confidence 234699999999999998887654 5555666665543311 1222344566677
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g 271 (676)
+.+.+++++++|.+.++.... .++..|+++.+.+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~ 251 (287)
T PRK06194 215 APPTRSQLIAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIR 251 (287)
T ss_pred ccccchhhHHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHH
Confidence 788889999999887753221 1688899988888764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=170.31 Aligned_cols=232 Identities=16% Similarity=0.128 Sum_probs=164.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
+++||||||+|+||+++++.|+++ +++|++++|...... .+.......+++.+++|+.|.+++..++.. .+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALA--AFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999998 678888888642211 111111124688999999999998877743 26
Q ss_pred CCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|+|||+++...... ..+++...++.|+.++.++++++.. .+ ..+||++||...+....
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------------ 144 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAALG------------ 144 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCCC------------
Confidence 899999999764321 2223345678999999999988742 23 56899999954432111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+++.+++++ |+++++++||.++++..... .....+........ ..++++++
T Consensus 145 ---~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 212 (257)
T PRK07074 145 ---HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY---------PLQDFATP 212 (257)
T ss_pred ---CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC---------CCCCCCCH
Confidence 1259999999999999988664 79999999999998754211 11122222222111 12379999
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHH
Q 005818 230 EDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDIC 267 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~ 267 (676)
+|++++++.++.... .++.+++.++...+.+|+.+.+.
T Consensus 213 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 253 (257)
T PRK07074 213 DDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLT 253 (257)
T ss_pred HHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhc
Confidence 999999999996422 46788899988888999887654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-19 Score=177.39 Aligned_cols=232 Identities=19% Similarity=0.160 Sum_probs=159.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.++||||||+|+||.++++.|+++ +++|++.+|..... ..+.. .....+.++.+|++|++++..++..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARA--RLAAL-EIGPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHH--HHHHH-HhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34579999999999999999999999 68898888864211 11110 1123588999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC----CCceEEEEecccc-cCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG----QIKRFIHVSTDEV-YGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~----~~~~~v~~SS~~v-yg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++.... .-.+||++||... ++.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 147 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE----------- 147 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-----------
Confidence 3799999999976432 2334566788999999999999986431 1247999999532 221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
.+...|+.+|...+.+++.++.+ +|+++++++||.++++..... ..+..... ...+.....++.+...+.+
T Consensus 148 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (257)
T PRK07067 148 ----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYEN-RPPGEKKRLVGEAVPLGRM 222 (257)
T ss_pred ----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccC-CCHHHHHHHHhhcCCCCCc
Confidence 13457999999999999887764 589999999999999753211 01100000 0000000011222234578
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKKER 257 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~ 257 (676)
.+.+|+|+++..++.... .+++|++.+|..+
T Consensus 223 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 223 GVPDDLTGMALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred cCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence 999999999999987542 5789999887654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=170.56 Aligned_cols=227 Identities=16% Similarity=0.113 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+. ..+.++..+++|+.|++++.+++..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLK--GQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHH--hcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888888642111 00011 1134588899999999998888743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...+++|+.++.++++++... ....+||++||.......
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------- 153 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR---------- 153 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC----------
Confidence 3689999999986432 223344677889999999999988743 125789999996443221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
.+...|+.+|...|.+++.++. .+|+++.++|||.+.++..........+........+ ...+.
T Consensus 154 ----~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 220 (255)
T PRK07523 154 ----PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWG 220 (255)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCc
Confidence 1245699999999999988876 3589999999999998854211001122222222221 11367
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 228 YCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
.++|+|.+++.++.... .++.+++.++...|
T Consensus 221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 221 KVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred CHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 89999999999986532 46789998876443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=172.00 Aligned_cols=242 Identities=12% Similarity=0.027 Sum_probs=158.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.. |+++++|||||+|+||+++++.|+++ +++|++.+|..... +.... .....++.++.+|++|++++.+++.
T Consensus 1 ~~~-~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l--~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (275)
T PRK05876 1 MDG-FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGL--RQAVNHLRAEGFDVHGVMCDVRHREEVTHLAD 75 (275)
T ss_pred CCC-cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 444 56789999999999999999999999 67888887764211 11100 1113357889999999999888764
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|+|||+||..... .+.+++...+++|+.++.++.+++. +.+...++|++||...+.+..
T Consensus 76 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~---- 151 (275)
T PRK05876 76 EAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA---- 151 (275)
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC----
Confidence 3 2689999999975432 2334556778999999999998874 222236899999976654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+.+.++.+ +|+++++++||.+.++.... ..................+....
T Consensus 152 ----------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 219 (275)
T PRK05876 152 ----------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN--SERIRGAACAQSSTTGSPGPLPL 219 (275)
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc--hhhhcCccccccccccccccccc
Confidence 2456999999755555544433 48999999999998775321 10000000001111122233334
Q ss_pred eEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHH
Q 005818 223 VRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICK 268 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~ 268 (676)
.+++++++|+|++++.+++++ +.|.+.+ +.....+.+.+.+
T Consensus 220 ~~~~~~~~dva~~~~~ai~~~---~~~~~~~--~~~~~~~~~~~~~ 260 (275)
T PRK05876 220 QDDNLGVDDIAQLTADAILAN---RLYVLPH--AASRASIRRRFER 260 (275)
T ss_pred cccCCCHHHHHHHHHHHHHcC---CeEEecC--hhhHHHHHHHHHH
Confidence 567899999999999999754 3555543 2344444444333
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=169.45 Aligned_cols=223 Identities=19% Similarity=0.151 Sum_probs=156.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|.................++.++.+|+.|++.+..++..
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45579999999999999999999999 56788888864221100000011234688999999999988777643
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+++...... +.+++...++.|+.++.++++++. +.+ .++||++||.....+.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~----------- 148 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGN----------- 148 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCC-----------
Confidence 36899999998865421 223345678899999999998884 334 6899999996443211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
.+...|+.+|...|.+++.++++ .+++++++||+.++++.... +...+.+..... ++ .+.+++
T Consensus 149 ---~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~--~~-------~~~~~~ 214 (246)
T PRK05653 149 ---PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKE--IP-------LGRLGQ 214 (246)
T ss_pred ---CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhc--CC-------CCCCcC
Confidence 22456999999999998887664 38999999999999986531 122222222211 11 135889
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+|+++++..++.... .+..|++++|.
T Consensus 215 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 215 PEEVANAVAFLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred HHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 9999999999986532 46789988875
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-20 Score=180.89 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=108.2
Q ss_pred EEcCCcchhHHHHHHHHHcCC---------------------------------------ceeeccccCCC------hHH
Q 005818 389 IYGRTGWIGGLLSKICEKKGI---------------------------------------PFEYGKGRLEN------RSQ 423 (676)
Q Consensus 389 itG~~G~iG~~l~~~L~~~g~---------------------------------------~v~~~~~Dl~d------~~~ 423 (676)
|||||||||++|+++|++++. +|.++.||+++ ++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999874 24678899985 456
Q ss_pred HHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCC--
Q 005818 424 LLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTG-- 500 (676)
Q Consensus 424 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~-- 500 (676)
+..+.+.+ |+||||||.. ++. .+.....++||.||.+++++|.+.. .+++|+||+.+.+.......+..
T Consensus 81 ~~~L~~~v--~~IiH~Aa~v-----~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~ 152 (249)
T PF07993_consen 81 YQELAEEV--DVIIHCAASV-----NFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYP 152 (249)
T ss_dssp HHHHHHH----EEEE--SS------SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-H
T ss_pred hhcccccc--ceeeecchhh-----hhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccc
Confidence 77777777 9999999954 332 3445678999999999999999654 47888888444333221110000
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCCh-H-------H----HHHHHHhcCceecc---
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNP-R-------N----FITKISRYNKVVNI--- 565 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~-~-------~----~~~~~~~~~~~~~~--- 565 (676)
....+.+......++|..||+.+|++++.+.+..+++++++||+.++|. . + ++............
T Consensus 153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 232 (249)
T PF07993_consen 153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD 232 (249)
T ss_dssp HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence 0001111233445789999999999999987667999999999999982 2 2 23333322222211
Q ss_pred ---CCCccchhhHHHHH
Q 005818 566 ---PNSMTILDELLPIS 579 (676)
Q Consensus 566 ---~~~~~~v~D~a~~~ 579 (676)
.-++++||.+|++|
T Consensus 233 ~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 233 PDARLDLVPVDYVARAI 249 (249)
T ss_dssp --TT--EEEHHHHHHHH
T ss_pred CCceEeEECHHHHHhhC
Confidence 13889999999886
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.9e-18 Score=178.80 Aligned_cols=231 Identities=12% Similarity=0.120 Sum_probs=157.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCC-----C--CCCCCeEEEEecCCCHHHHH
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNP-----S--RLSPNFKFIKGDVASADLVH 74 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~-----~--~~~~~v~~v~~Dl~d~~~~~ 74 (676)
++++++||||||+|+||+++++.|+++ |++|++++|....... ..+.. . ....+++++.+|+.|.+++.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~ 154 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG 154 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence 456789999999999999999999999 6788888776432110 00000 0 01245899999999999999
Q ss_pred HHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 75 FILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 75 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
+++ .++|+|||++|.... ...++...+++|+.|+.+|+++|+..+ +++||++||.+++.... . . ...
T Consensus 155 ~aL--ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~--p-----~-~~~ 221 (576)
T PLN03209 155 PAL--GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGF--P-----A-AIL 221 (576)
T ss_pred HHh--cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCc--c-----c-cch
Confidence 888 789999999987532 112455678899999999999999887 89999999976531110 0 0 011
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
.....|...|..+|+.+. ..|+++++||||.++++...... .+ .+.....+......+...|+|+
T Consensus 222 ~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~----------t~-~v~~~~~d~~~gr~isreDVA~ 286 (576)
T PLN03209 222 NLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE----------TH-NLTLSEEDTLFGGQVSNLQVAE 286 (576)
T ss_pred hhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCcccccc----------cc-ceeeccccccCCCccCHHHHHH
Confidence 233457778888887765 35999999999999987542100 00 0111111111113578899999
Q ss_pred HHHHHHhcCC--CCceEEEcCCCcc---cHHHHHH
Q 005818 235 AFDTILHKGE--VGHVYNIGTKKER---RVIDVAT 264 (676)
Q Consensus 235 ai~~~~~~~~--~~~~y~i~~~~~~---s~~el~~ 264 (676)
+++.++.++. .+.+|.+.++... .+.+++.
T Consensus 287 vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 287 LMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred HHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHH
Confidence 9999987543 4678888877643 4444443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=169.39 Aligned_cols=223 Identities=17% Similarity=0.119 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|+.++|+||||+|+||++++++|+++ +++|+++ .|.... ..... .......++++.+|++|++++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQA--ADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHH--HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 5677664 443211 10000 011134688999999999999887753
Q ss_pred ---------CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcC
Q 005818 80 ---------EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 ---------~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|+|||+||...... +.+.+...++.|+.++.++++++... ....+||++||..++.+..
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~---- 155 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT---- 155 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC----
Confidence 26999999999764322 22233567789999999999988753 1235899999987765332
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...|.+++.++++ .++++++++||.+.++.......-..+........ .
T Consensus 156 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~ 216 (254)
T PRK12746 156 ----------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS---------V 216 (254)
T ss_pred ----------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC---------C
Confidence 2346999999999998877664 47999999999998875421000011111111111 1
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+++++|+++++..++..+. .+++|+++++
T Consensus 217 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 217 FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 1256789999999998887542 4678999876
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=172.03 Aligned_cols=233 Identities=16% Similarity=0.099 Sum_probs=156.0
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
...++.++||||||+|+||++++++|+++ +++|++++|..... +.+.......++.++.+|+.|++++..+++.
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAAL--AATAARLPGAKVTATVADVADPAQVERVFDTAV 81 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHH
Confidence 34566789999999999999999999999 67788888854211 1111111111578899999999998877743
Q ss_pred ---CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCC-ceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQI-KRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~-~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+|+.... ....+++...++.|+.++.++++++. ..+ . .+|+++||.....+..
T Consensus 82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~~----- 155 (264)
T PRK12829 82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGYP----- 155 (264)
T ss_pred HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCCC-----
Confidence 379999999998622 22334567889999999999998874 223 3 5788888754321111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceee---cCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH---GDG 220 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 220 (676)
+...|+.+|...|.+++.++... +++++++|||+++|+... ............+. .... ...
T Consensus 156 ---------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (264)
T PRK12829 156 ---------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR--RVIEARAQQLGIGL-DEMEQEYLEK 223 (264)
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH--HHhhhhhhccCCCh-hHHHHHHHhc
Confidence 13459999999999998877653 899999999999998641 11111111000000 0000 000
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.....+++++|+++++..++... ..++.|++.++..
T Consensus 224 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 224 ISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 01125899999999998887542 2577899988753
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=169.51 Aligned_cols=225 Identities=16% Similarity=0.082 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEE-EcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVV-LDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~-~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|.+++||||||+|+||+++++.|+++ +++|++ ..|..... +... ......++.++.+|++|++++..+++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAA--EETAEEIEALGRKALAVKANVGDVEKIKEMFAQID 77 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 566655 34432111 0000 011234688899999999998887743
Q ss_pred ---CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+...... +.++....+++|+.++.++++++.... +.++||++||...+...
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 148 (250)
T PRK08063 78 EEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL--------- 148 (250)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---------
Confidence 26899999998754322 222334567899999999998887531 24699999996554321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
.+...|+.+|...|.+++.++.+ .++++++++||.+..+..........+........+ ...+
T Consensus 149 -----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~ 214 (250)
T PRK08063 149 -----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRM 214 (250)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCC
Confidence 12456999999999999887765 489999999999987653211111122222221111 1147
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
++.+|++++++.+++.+. .++.+++.++..
T Consensus 215 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 215 VEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred cCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 889999999999987543 477888887754
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=169.05 Aligned_cols=217 Identities=14% Similarity=0.143 Sum_probs=155.2
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
...+++++||||||+|+||++++++|+++ +++|++++|....... ........+++.+.+|+.|.+++.++++.
T Consensus 2 ~~~~~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (239)
T PRK12828 2 EHSLQGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQ--TLPGVPADALRIGGIDLVDPQAARRAVDEVN 77 (239)
T ss_pred CCCCCCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHH--HHHHHhhcCceEEEeecCCHHHHHHHHHHHH
Confidence 33455789999999999999999999999 6788888885422110 00011123577889999999998877642
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+++..... ...+++...+..|+.++.++++++.. .+ .++||++||...++...
T Consensus 78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 149 (239)
T PRK12828 78 RQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGP------- 149 (239)
T ss_pred HHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCC-------
Confidence 2799999999875421 12233456788999999999888753 33 78999999987765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.. .++++.++|||.++++..... .+ ......
T Consensus 150 -------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---------------~~----~~~~~~ 203 (239)
T PRK12828 150 -------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD---------------MP----DADFSR 203 (239)
T ss_pred -------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc---------------CC----chhhhc
Confidence 2346999999999888876654 489999999999998743110 00 001123
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
+++++|++++++.++.+.. .++.+.+.++..
T Consensus 204 ~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 204 WVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVA 237 (239)
T ss_pred CCCHHHHHHHHHHHhCcccccccceEEEecCCEe
Confidence 7899999999999997542 467788877653
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-18 Score=167.10 Aligned_cols=223 Identities=15% Similarity=0.082 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||++++++|+++ +++|++..+..... .+.... .....++.++.+|+.|++.+.++++.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEA-AENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 57776654432111 111100 01234688999999999998887754
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... .+.+.+.+.++.|+.++.++++++... ....+||++||...+.+.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 150 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG---------- 150 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC----------
Confidence 3689999999986532 123456678899999999999988642 124689999996443221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
.+...|+.+|...+.+++.++.+. ++++++++||.+.++... ............+. ..+.+.
T Consensus 151 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~---------~~~~~~ 215 (247)
T PRK12935 151 ----FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA--EVPEEVRQKIVAKI---------PKKRFG 215 (247)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh--hccHHHHHHHHHhC---------CCCCCc
Confidence 123569999999998887776654 899999999999876431 11112222222111 223589
Q ss_pred eHHHHHHHHHHHHhcC--CCCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKG--EVGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~--~~~~~y~i~~~~ 255 (676)
+++|++++++.+++.. ..++.||+.++.
T Consensus 216 ~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 216 QADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred CHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 9999999999998754 357889998763
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=170.75 Aligned_cols=222 Identities=11% Similarity=0.124 Sum_probs=156.6
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC--CCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS--RLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++.++||||||+|+||++++++|+++ +++|++.+|..... +.+... ....++..+.+|++|++++..++..
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERL--DEVAAEIDDLGRRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHH--HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 67888888864221 111111 1134688999999999998877643
Q ss_pred ---CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+.... ..+.+++...++.|+.++..+++++... ....+||++||...+.+..
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------- 149 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-------- 149 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC--------
Confidence 378999999987532 2344566788999999999999998652 1125899999976543222
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH-----------HHHHHHHHCCCCce
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGKPLP 215 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~-----------~~~~~~~~~~~~~~ 215 (676)
+...|+.+|...+.+++.++.+ .++++.+++||.++++.... .+ ..+........
T Consensus 150 ------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (258)
T PRK07890 150 ------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG--YFRHQAGKYGVTVEQIYAETAANS--- 218 (258)
T ss_pred ------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH--HhhhcccccCCCHHHHHHHHhhcC---
Confidence 2456999999999999988765 38999999999999985421 11 11111111111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
....+.+++|++++++.+++.. -.++.+.+.++
T Consensus 219 ------~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg 254 (258)
T PRK07890 219 ------DLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG 254 (258)
T ss_pred ------CccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence 1124678999999999988742 24566666554
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=172.40 Aligned_cols=207 Identities=11% Similarity=0.046 Sum_probs=150.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
|+|+||||+|+||++++++|+++|++| .++++|++|.+++.++++.. ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999765 44579999999888877642 5799999
Q ss_pred CccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 439 AAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 439 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
+||...... ..+..++....+++|+.++.++++++ ++.+. ++|++||..... +..+
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~~ 144 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI------------------AYPG 144 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc------------------CCCC
Confidence 999652111 11123345577899999999999997 44454 667777754321 1123
Q ss_pred CCchhhhHHHHHHHHHHccC---eEEEEeeecccCCC---CChHH---------------HHHHHHhcCceeccCCCccc
Q 005818 513 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDL---NNPRN---------------FITKISRYNKVVNIPNSMTI 571 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~---~g~~~---------------~~~~~~~~~~~~~~~~~~~~ 571 (676)
.+.|+.||+..|.+++.+.+ .++++++++||+.+ +|+.. .+.+...... ...+.+
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d 220 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS----FAIPGD 220 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc----CCCCCC
Confidence 47899999999999988643 36899999999877 54320 1111111111 112457
Q ss_pred hhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcC
Q 005818 572 LDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 572 v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
++|++++++.++..+ ....||+++++..++.|+++.+.+.++
T Consensus 221 ~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 221 PQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 899999999999876 346899999999999999888888764
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=176.25 Aligned_cols=262 Identities=21% Similarity=0.216 Sum_probs=181.2
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCccccc-cCCCC--------------CCCCCCeEEEEecC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSNL-KNLNP--------------SRLSPNFKFIKGDV 67 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~-~~~~~--------------~~~~~~v~~v~~Dl 67 (676)
++..++|||||||||+|..+++.|++.-+.+ +++++-|.+..... +++.. .....++..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 4678999999999999999999999986443 67777776644321 11110 12446789999999
Q ss_pred CCHH------HHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCC
Q 005818 68 ASAD------LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETD 141 (676)
Q Consensus 68 ~d~~------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~ 141 (676)
.+++ ++..+. ..+++|||+||...++... ...+..|..||.++++.|++..+++-|+|+||+.+.....
T Consensus 89 ~~~~LGis~~D~~~l~--~eV~ivih~AAtvrFde~l---~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~ 163 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLA--DEVNIVIHSAATVRFDEPL---DVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVG 163 (467)
T ss_pred cCcccCCChHHHHHHH--hcCCEEEEeeeeeccchhh---hhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccc
Confidence 8653 344444 7899999999998876443 3677899999999999999998899999999976652221
Q ss_pred CC-----------cCC---CCCCC---------C---CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC
Q 005818 142 ED-----------AVV---GNHEA---------S---QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 195 (676)
Q Consensus 142 ~~-----------~~~---~~~e~---------~---~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~ 195 (676)
.- ..+ ..+++ . .....|.|..+|+.+|..+.+++ .++|++|+||+.|...-.
T Consensus 164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~ 241 (467)
T KOG1221|consen 164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYK 241 (467)
T ss_pred cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceecccc
Confidence 10 000 00111 0 01134679999999999999865 479999999999987644
Q ss_pred CCCC-hH------HHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh-c----C-CCCceEEEcCCC--cccHH
Q 005818 196 FPEK-LI------PKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH-K----G-EVGHVYNIGTKK--ERRVI 260 (676)
Q Consensus 196 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~-~----~-~~~~~y~i~~~~--~~s~~ 260 (676)
.|-. .+ ..++-...+|.--.+..+++...+++.||.++.+++.+.- . . ..-.+||+++++ ++++.
T Consensus 242 EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~ 321 (467)
T KOG1221|consen 242 EPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG 321 (467)
T ss_pred CCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence 2211 00 0111111222222345677888899999999999987662 1 1 124589999875 69999
Q ss_pred HHHHHHHHHhCC
Q 005818 261 DVATDICKLFSL 272 (676)
Q Consensus 261 el~~~i~~~~g~ 272 (676)
++.+...+....
T Consensus 322 ~~~e~~~~~~~~ 333 (467)
T KOG1221|consen 322 DFIELALRYFEK 333 (467)
T ss_pred HHHHHHHHhccc
Confidence 999988877653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.9e-18 Score=165.98 Aligned_cols=220 Identities=15% Similarity=0.082 Sum_probs=155.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLTE-- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-- 80 (676)
+..++||||||+|+||++++++|+++ +++|++++|+...... ..+.. ..++.++.+|+.|++++..++...
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888887532110 11111 345889999999999998877432
Q ss_pred ---CCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 81 ---KIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 81 ---~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
++|+|||+|+..... .+.+++...++.|+.++.++++.+.. .+ .++||++||...+.+..
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 149 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRP------- 149 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCC-------
Confidence 789999999875322 23345567889999998888876653 33 67899999977765433
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHH----HHHHHHHCCCCceeecCCC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP----KFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...+.+++.++.++ ++++++++||.+.++... .... ..........
T Consensus 150 -------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~~~--------- 211 (251)
T PRK07231 150 -------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLE--AFMGEPTPENRAKFLATI--------- 211 (251)
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcch--hhhcccChHHHHHHhcCC---------
Confidence 24569999999999998887653 899999999999766431 1111 2222222211
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
....+++++|++.+++.++.... .++.+.+.++.
T Consensus 212 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 212 PLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence 11247899999999999986543 35667776654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=169.58 Aligned_cols=232 Identities=16% Similarity=0.161 Sum_probs=156.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.++||||||+|+||+++++.|+++ +++|++++|+..... ...+.......++.++.+|++|.+++..+++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999 678888887642111 00011011113588999999999998877643
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEeccc-ccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDE-VYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++.. .+.-.++|++||.. .++..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~---------- 149 (259)
T PRK12384 80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK---------- 149 (259)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC----------
Confidence 3789999999876432 23344567789999999888877654 22125899999853 33321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHC--CCCceeecCCCceEe
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMK--GKPLPIHGDGSNVRS 225 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 225 (676)
....|+.+|...+.+++.++. .+|+++.++|||.++++.... .+++.+...... +.......++...+.
T Consensus 150 -----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (259)
T PRK12384 150 -----HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGIKPDEVEQYYIDKVPLKR 223 (259)
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCCChHHHHHHHHHhCcccC
Confidence 134699999999888888765 368999999999998765422 233332221100 000001112233456
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
+++.+|++++++.++.+.. .++.|++.++..
T Consensus 224 ~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 224 GCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred CCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 8999999999998886432 467899988763
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.1e-18 Score=165.75 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=154.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc--cccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--NLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|+++++..... ....+. ......++.++.+|+.|++++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45689999999999999999999999 67777766532111 010000 011234688999999999998877642
Q ss_pred ----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH-----HcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----- 155 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNR----- 155 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCC-----
Confidence 469999999998652 23344556788999999999999987 333 57899999976654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.+ .+++++++|||.+.++........ .......+.
T Consensus 156 ---------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~--------- 213 (249)
T PRK12827 156 ---------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPV--------- 213 (249)
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCC---------
Confidence 2346999999999998887665 389999999999999865321111 112211111
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+.+.+|++++++.++.... .++.+++.++
T Consensus 214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 214 QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence 124578999999998885432 4567888765
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-18 Score=168.56 Aligned_cols=227 Identities=14% Similarity=0.014 Sum_probs=154.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++++||||||+|+||++++++|+++ +++|++..+........... ......++..+.+|+++++++..++..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 4589999999999999999999999 56766655432111100000 001123567889999999988777643
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|+|||+||...... ..+.....++.|+.++.++++++... ....+||++||...|.+..
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 149 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------- 149 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC-------------
Confidence 37899999999754322 12223467899999999999888753 1135899999987764322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCC-CChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFP-EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
+...|+.+|...|.+++.+++++ ++.+.+++||.+.++.... .............. +. ....+++++|
T Consensus 150 -~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~d 220 (252)
T PRK06077 150 -GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK--FT------LMGKILDPEE 220 (252)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh--cC------cCCCCCCHHH
Confidence 34679999999999999988875 6899999999998764310 00000000111110 11 1225899999
Q ss_pred HHHHHHHHHhcCC-CCceEEEcCCCc
Q 005818 232 VAEAFDTILHKGE-VGHVYNIGTKKE 256 (676)
Q Consensus 232 ~a~ai~~~~~~~~-~~~~y~i~~~~~ 256 (676)
++++++.+++.+. .+++|++.++..
T Consensus 221 va~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 221 VAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred HHHHHHHHhCccccCCCeEEecCCee
Confidence 9999999997543 578999998753
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-18 Score=166.52 Aligned_cols=224 Identities=15% Similarity=0.118 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||++++++|+++ +++|++++|....... .........++.++++|++|++++.++++.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAER-VAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHH-HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 6788888886422110 000001234588999999999999887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+++..... .+.+++...++.|+.++.++.+++. +.+ .++||++||...+.+..
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---------- 148 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGR---------- 148 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC----------
Confidence 3799999999986532 2233445678999999988776653 444 67999999965543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.+. +++++++|||.++++..... ...+........... ....
T Consensus 149 ----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 216 (252)
T PRK06138 149 ----GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH--------PMNR 216 (252)
T ss_pred ----CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC--------CCCC
Confidence 13569999999999999887665 89999999999998854210 000111111111110 1113
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+++++|++++++.++.++. .+..+.+.++
T Consensus 217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 217 FGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 7889999999999987653 3566777654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.5e-18 Score=166.05 Aligned_cols=227 Identities=18% Similarity=0.141 Sum_probs=158.7
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.+.++.++||||||+|+||+++++.|+++ +++|++++|...... ...+ .....++.++++|+.|++++.++++
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~ 76 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAAL--EAAGGRAHAIAADLADPASVQRFFD 76 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHH
Confidence 444566799999999999999999999999 678888877542111 0011 1113468999999999999887774
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|+|||+++..... .+.+++...++.|+.++.++++++...- +..+||++||...+.+..
T Consensus 77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 151 (250)
T PRK12939 77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP----- 151 (250)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----
Confidence 3 4799999999976432 2333455678899999999998875421 135899999965543322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
....|+.+|...|.+++.++.+ .++++.+++||.+..+....... ..+........ ..
T Consensus 152 ---------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~---------~~ 212 (250)
T PRK12939 152 ---------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGR---------AL 212 (250)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcC---------CC
Confidence 1345999999999999887654 47999999999998775421110 02222222221 12
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+++++|++++++.++... ..|+.+.+.++.
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 213 ERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 25789999999999999753 256778887764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=165.70 Aligned_cols=227 Identities=15% Similarity=0.128 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.++||||||+|+||+++++.|+++ +++|++.+|.................++.++++|++|++++.++++.
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34689999999999999999999998 67888888864211100000011234678899999999998766632
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+..... .+.+.+...++.|+.++.++++++... ++..+||++||...+.+....
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------- 159 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------- 159 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--------
Confidence 3689999999875322 233345567889999999999987654 225799999997665433211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
..+...|+.+|+..|.+++.+++++ ++++.+++|+.+-.+.. ..+++.+.+......++. .+..
T Consensus 160 --~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~--~~~~~~~~~~~~~~~~~~---------~~~~ 226 (259)
T PRK08213 160 --VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT--RGTLERLGEDLLAHTPLG---------RLGD 226 (259)
T ss_pred --ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch--hhhhHHHHHHHHhcCCCC---------CCcC
Confidence 1234679999999999999887754 79999999998876643 223444444444333322 2445
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|++.++..++.... .|..+++.++
T Consensus 227 ~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 227 DEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred HHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 7999998888875432 4667777655
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=208.88 Aligned_cols=226 Identities=17% Similarity=0.251 Sum_probs=160.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC----C----------------------------------ceeeccccCC------
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG----I----------------------------------PFEYGKGRLE------ 419 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g----~----------------------------------~v~~~~~Dl~------ 419 (676)
.++|+|||||||||++|+++|++++ + ++.++.+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 3689999999999999999999876 2 2456678886
Q ss_pred ChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCC-
Q 005818 420 NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPE- 497 (676)
Q Consensus 420 d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~- 497 (676)
+.+.+.++..++ |+|||+|+.. + + ..........|+.|+.+++++|++.++ +++|+||..+|+.....+.
T Consensus 1051 ~~~~~~~l~~~~--d~iiH~Aa~~---~--~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443 1051 SDEKWSDLTNEV--DVIIHNGALV---H--W-VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred CHHHHHHHHhcC--CEEEECCcEe---c--C-ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchh
Confidence 345566666665 9999999965 2 1 122234456899999999999998876 5788888888853211000
Q ss_pred -----CCCCCccccC----CCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcC
Q 005818 498 -----GTGIGFKEED----KPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYN 560 (676)
Q Consensus 498 -----~~~~~~~~e~----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~ 560 (676)
....++.++. .+..+.++|+.||+.+|+++..+.+ .+++++++|++++||+. .++..++.+.
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence 0001122221 1223457899999999999988754 48999999999999984 3444444322
Q ss_pred c----e--eccCCCccchhhHHHHHHHHHhcCC--C--ceeEccCCCcccHHHHHHHHHhhcCCCCccc
Q 005818 561 K----V--VNIPNSMTILDELLPISVEMAKRNL--S--GIWNFTNPGVVSHNEILEMYKAYIDPGFKWT 619 (676)
Q Consensus 561 ~----~--~~~~~~~~~v~D~a~~~~~~~~~~~--~--g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~ 619 (676)
. . .....+|++|+|++++++.++.++. . .+||++++..+++.++++.+.+. |.+.+..
T Consensus 1202 ~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~ 1269 (1389)
T TIGR03443 1202 IQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIV 1269 (1389)
T ss_pred HHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCcc
Confidence 1 1 1122389999999999999987652 1 38999999999999999999764 6655443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=164.98 Aligned_cols=222 Identities=16% Similarity=0.154 Sum_probs=155.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
++++||||||+|+||++++++|+++ +++|++++|...... .+.. .....++.++++|+.|.+++++++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAE--KVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHH--HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999 678888887542111 1100 11134688999999999998887642
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++. +.+ ..+||++||...+.....
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~-------- 148 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSG-------- 148 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCC--------
Confidence 3689999999875321 1223345678999999999988775 333 579999999877755432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceeecCCCce
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+++.++++. ++++++++||.++++.... ......+........+.
T Consensus 149 ------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 213 (250)
T TIGR03206 149 ------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL--------- 213 (250)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------
Confidence 2359999999998888877664 8999999999999874310 00001122222222111
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|+|+++..++.... .++.+++.++.
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 125567999999999886533 46788887663
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-18 Score=168.89 Aligned_cols=229 Identities=14% Similarity=0.095 Sum_probs=153.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|+.++||||||+|+||+++++.|+++ +++|++.+|..... .+.+. ......++..+++|++|++.+..+++.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPR-ANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHh-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 55689999999999999999999999 67888777753211 11000 001134578899999999998877642
Q ss_pred --CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
.++|+|||+|+.... ...++...+++|+.++.++++++...- +..++|++||........ .+.. ..
T Consensus 81 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~~--~~ 149 (248)
T PRK07806 81 EFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKTM--PE 149 (248)
T ss_pred hCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccCC--cc
Confidence 369999999986432 223455677899999999999998642 125899999954321100 0111 11
Q ss_pred CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
..+|+.+|..+|.+++.++.+ .++++++++|+.+-++... .+.............. ....+++++|++
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~dva 220 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA--TLLNRLNPGAIEARRE-------AAGKLYTVSEFA 220 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh--hhhccCCHHHHHHHHh-------hhcccCCHHHHH
Confidence 457999999999999988765 4789999998877665221 0000000000000001 112689999999
Q ss_pred HHHHHHHhcCC-CCceEEEcCCCc
Q 005818 234 EAFDTILHKGE-VGHVYNIGTKKE 256 (676)
Q Consensus 234 ~ai~~~~~~~~-~~~~y~i~~~~~ 256 (676)
++++.+++... .+++|++++++.
T Consensus 221 ~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 221 AEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred HHHHHHhhccccCccEEEecCccc
Confidence 99999998653 678899998763
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=164.15 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=156.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d 83 (676)
++.++++||||+|+||+++++.|+++ +++|++++|..... +.+. ...+..++.+|++|.+.+.+++.. .++|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~--~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAAL--DRLA---GETGCEPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH---HHhCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence 44589999999999999999999999 67888888864211 1111 011357889999999998888754 3589
Q ss_pred EEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+|+..... ...+++...++.|+.++.++++++... +...+||++||...+.+..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 145 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-------------- 145 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------------
Confidence 999999986432 223345667889999999999888653 1136899999976654322
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
+...|+.+|..+|.+++.++.+ .+++++.+|||.++++................... ....+++++|+
T Consensus 146 ~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~ 216 (245)
T PRK07060 146 DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDV 216 (245)
T ss_pred CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHH
Confidence 1346999999999999988765 37999999999999886421100011111111111 11258999999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCC
Q 005818 233 AEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 233 a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+++++.+++.+. .++.+++.+|.
T Consensus 217 a~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 217 AAPILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred HHHHHHHcCcccCCccCcEEeECCCc
Confidence 999999997542 47788887653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.4e-18 Score=164.25 Aligned_cols=211 Identities=16% Similarity=0.160 Sum_probs=146.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
|++|+||||||+|+||+++++.|+++ ++|++++|..... ..+.. ...+++++++|+.|++.+.+++... ++|
T Consensus 1 ~~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id 73 (227)
T PRK08219 1 MERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERL--DELAA--ELPGATPFPVDLTDPEAIAAAVEQLGRLD 73 (227)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHH--HHHHH--HhccceEEecCCCCHHHHHHHHHhcCCCC
Confidence 35679999999999999999999987 5678888764211 11110 1235789999999999999888543 699
Q ss_pred EEEEccccCCcCC----cCCChHHHHHHHHHHHH----HHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHVDN----SFGNSFEFTKNNIYGTH----VLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~----~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+++...... ..+++...++.|+.+.. +++++++..+ .++|++||...++...+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~~~------------- 138 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRANPG------------- 138 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcCCC-------------
Confidence 9999999865321 22234456788888844 4445555443 78999999776643322
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc-C-CCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY-G-LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~-~-l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
...|+.+|...|.+++.++... + +++..++||.+.++.. ..+... .+... ....+++++|++
T Consensus 139 -~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~------~~~~~~--~~~~~-------~~~~~~~~~dva 202 (227)
T PRK08219 139 -WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ------RGLVAQ--EGGEY-------DPERYLRPETVA 202 (227)
T ss_pred -CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh------hhhhhh--hcccc-------CCCCCCCHHHHH
Confidence 3469999999999888876542 4 7888888887665422 111111 01111 113579999999
Q ss_pred HHHHHHHhcCCCCceEEEcC
Q 005818 234 EAFDTILHKGEVGHVYNIGT 253 (676)
Q Consensus 234 ~ai~~~~~~~~~~~~y~i~~ 253 (676)
++++.+++++..+.+|++..
T Consensus 203 ~~~~~~l~~~~~~~~~~~~~ 222 (227)
T PRK08219 203 KAVRFAVDAPPDAHITEVVV 222 (227)
T ss_pred HHHHHHHcCCCCCccceEEE
Confidence 99999999877677787754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=163.51 Aligned_cols=221 Identities=16% Similarity=0.156 Sum_probs=150.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||++++++|+++ +++|++..+..... ..... ......++.++++|++|.+++.+++..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDA-AEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHH-HHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999 56666655332111 00000 011134578899999999998887742
Q ss_pred CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHcC------CCceEEEEecccc-cCCCCCCcCCC
Q 005818 80 EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKITG------QIKRFIHVSTDEV-YGETDEDAVVG 147 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~------~~~~~v~~SS~~v-yg~~~~~~~~~ 147 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++...- .-.+||++||... ++....
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----- 153 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----- 153 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC-----
Confidence 2689999999986432 1333455789999999999988776421 0136999999644 432211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...|.+++.++++. |++++++||+.++++...... .+..........++.
T Consensus 154 ---------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~--------- 214 (248)
T PRK06123 154 ---------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMG--------- 214 (248)
T ss_pred ---------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCC---------
Confidence 1249999999999999887764 899999999999998542211 222233332222211
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
-+.+++|++++++.++... ..++.|++.++
T Consensus 215 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 215 RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 1346799999999988653 35678888765
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.2e-18 Score=168.90 Aligned_cols=196 Identities=13% Similarity=0.173 Sum_probs=140.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHh------hc-cCCCEEEECcccc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADI------QN-VKPTHVFNAAGVT 443 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~------~~-~~~d~Vih~a~~~ 443 (676)
+|+||||||+||++++++|+++|++| ..+.+|+.|++.+.+++ ++ + |.|+|+++..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~--d~v~~~~~~~ 78 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI--SAVYLVAPPI 78 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCce--eEEEEeCCCC
Confidence 48999999999999999999999876 24678999999999998 34 5 9999998733
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC-eeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHH
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATG-CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 522 (676)
. + . .....+++++|++.|++.++++|+ .++.+ +..+..
T Consensus 79 ---~------~--~-----~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-------------------------~~~~~~ 117 (285)
T TIGR03649 79 ---P------D--L-----APPMIKFIDFARSKGVRRFVLLSASIIEKG-------------------------GPAMGQ 117 (285)
T ss_pred ---C------C--h-----hHHHHHHHHHHHHcCCCEEEEeeccccCCC-------------------------CchHHH
Confidence 0 0 0 234568999999999865555443 32210 012334
Q ss_pred HHHHHHHccCeEEEEeeecccCCCCChH--HH-HHHHHhcCcee-ccCC---CccchhhHHHHHHHHHhcC--CCceeEc
Q 005818 523 VEELLKEYDNVCTLRVRMPISSDLNNPR--NF-ITKISRYNKVV-NIPN---SMTILDELLPISVEMAKRN--LSGIWNF 593 (676)
Q Consensus 523 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~-~~~~~~~~~~~-~~~~---~~~~v~D~a~~~~~~~~~~--~~g~yn~ 593 (676)
.|+++++. .+++++++||+..+... .+ ...+....... ..++ +|++++|+++++..++..+ .+++|++
T Consensus 118 ~~~~l~~~---~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l 194 (285)
T TIGR03649 118 VHAHLDSL---GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVV 194 (285)
T ss_pred HHHHHHhc---cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEe
Confidence 56666432 47899999998777432 11 11111212222 1122 8999999999999999875 3469999
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCcccccchHhhh
Q 005818 594 TNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQA 627 (676)
Q Consensus 594 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~ 627 (676)
++++.+|+.|+++.+.+.+|.++.+..++..++.
T Consensus 195 ~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~ 228 (285)
T TIGR03649 195 LGPELLTYDDVAEILSRVLGRKITHVKLTEEELA 228 (285)
T ss_pred eCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHH
Confidence 9999999999999999999999888777765443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=165.44 Aligned_cols=215 Identities=16% Similarity=0.152 Sum_probs=150.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
++++|+||||+|+||+++++.|+++ +++|++++|..... ....+++++++|++|++++.+++.. .
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~--------~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARA--------APIPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhc--------cccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999 68888888864211 1134688999999999999888743 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..+||++||...+....
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------- 140 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP----------- 140 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC-----------
Confidence 689999999986532 233456688999999999998875 4444 68999999976554322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC----ChHHHH--HHHHHCCCCceeecCCCce
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE----KLIPKF--ILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~ 223 (676)
....|+.+|...|.+++.++.+ +|+++++++||.+.++..... ..+... .+...... . . ...
T Consensus 141 ---~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~--~~~ 211 (270)
T PRK06179 141 ---YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKA-V---A--KAV 211 (270)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHH-H---H--hcc
Confidence 1346999999999998887654 599999999999988743210 011000 00000000 0 0 001
Q ss_pred EeeeeHHHHHHHHHHHHhcCCCCceEEE
Q 005818 224 RSYLYCEDVAEAFDTILHKGEVGHVYNI 251 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~~~~~y~i 251 (676)
......+++++.++.++..+.....|..
T Consensus 212 ~~~~~~~~va~~~~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 212 KKADAPEVVADTVVKAALGPWPKMRYTA 239 (270)
T ss_pred ccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence 1245678999999999987665556644
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.6e-17 Score=165.71 Aligned_cols=226 Identities=12% Similarity=0.086 Sum_probs=156.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.+++|||||+|+||+++++.|+++ +++|++.++.......+.+.. .....++.++.+|++|.+++.++++.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 44589999999999999999999999 677877765432111111110 11234578899999999988777632
Q ss_pred --CCCCEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+|+... .+.+.+++...+++|+.++.++++++... ..-.+||++||...+.....
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~--------- 195 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH--------- 195 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC---------
Confidence 36899999998642 12345567788999999999999888652 11258999999877654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ +|+++.+++||.|.++.................. .+. ..+..
T Consensus 196 -----~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~r~~~ 261 (294)
T PRK07985 196 -----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ--TPM-------KRAGQ 261 (294)
T ss_pred -----cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhcc--CCC-------CCCCC
Confidence 235999999999999888776 4899999999999998532111111122222211 111 13567
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+|++.+++.++.... .++++.+.+|.
T Consensus 262 pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 262 PAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 8999999999986533 46777777664
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=167.17 Aligned_cols=218 Identities=17% Similarity=0.103 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++|+||||+|+||+++++.|+++ +++|++++|.... .+.+. ..+++++.+|++|++++.+++..
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~--l~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDK--MEDLA----SLGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHH----hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999998 6888888886421 11111 23588999999999998877742
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHH----HHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLL----EACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++..+. ..+++.+ ..++|++||...+....
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~---------- 141 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP---------- 141 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC----------
Confidence 3799999999986432 234456778899998855444 4555554 57999999965322111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCC----------ChHHH----HHHHHHCCCCc
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPE----------KLIPK----FILLAMKGKPL 214 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~----------~~~~~----~~~~~~~~~~~ 214 (676)
....|+.+|...+.+++.++. .+|+++++++||.+.++..... ..... +......
T Consensus 142 ----~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 213 (273)
T PRK06182 142 ----LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRS---- 213 (273)
T ss_pred ----CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHH----
Confidence 124599999999998876654 3589999999999988743100 00000 0011110
Q ss_pred eeecCCCceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCC
Q 005818 215 PIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTK 254 (676)
Q Consensus 215 ~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~ 254 (676)
......+.+.+|+|++++.+++.......|+++.+
T Consensus 214 -----~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 214 -----TYGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred -----hhccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence 01122467899999999999987555567877654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-17 Score=163.86 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||.+++++|+++ +++|++.+|..... .+... ......++.++.+|+.|.+.+.+++..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHED-ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchH-HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 67888887754211 00000 011134688899999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++... .+..+||++||...|.+...
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~--------- 191 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET--------- 191 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC---------
Confidence 378999999997532 1233445678999999999999988753 11358999999887755432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.++ |++++.++||.++.+..... ............. ....+.+
T Consensus 192 -----~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~-~~~~~~~~~~~~~---------~~~~~~~ 256 (290)
T PRK06701 192 -----LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD-FDEEKVSQFGSNT---------PMQRPGQ 256 (290)
T ss_pred -----cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc-cCHHHHHHHHhcC---------CcCCCcC
Confidence 2359999999999999988764 89999999999998753211 1112222221111 1225788
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
++|++++++.++.... .+..+++.++.
T Consensus 257 ~~dva~~~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 257 PEELAPAYVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence 9999999999987542 56778887664
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-17 Score=160.13 Aligned_cols=216 Identities=17% Similarity=0.094 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+..++||||||+|+||+++++.|+++ +++|++++|.. ......++..+++|+.|++.+.++++.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 44589999999999999999999999 68888888753 011234688999999999999887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++... ....+||++||.....+.
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------ 142 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR------------ 142 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC------------
Confidence 3589999999986532 233456678999999999999887531 124689999996543221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCC--------hHHHHHHHHHCCCCceeecCCC
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEK--------LIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.+...|+.+|...|.+++.++.+ +++++++++||.++++...... .+.........+.
T Consensus 143 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 211 (252)
T PRK08220 143 --IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI--------- 211 (252)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC---------
Confidence 23456999999999999888776 6899999999999998542100 0000111111111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
....+++++|++++++.++.... .++...+.+|
T Consensus 212 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg 247 (252)
T PRK08220 212 PLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG 247 (252)
T ss_pred CCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence 12358899999999999886432 4555666555
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=163.71 Aligned_cols=228 Identities=18% Similarity=0.135 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++++++|||||+|+||+++++.|+++ +++|++++|...... +.........++.++++|++|++++.+++..
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQ-NVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHH-HHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 678888887532111 0000011134688999999999998887742
Q ss_pred CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccc-cCCCCCCcCCCCC
Q 005818 80 EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEV-YGETDEDAVVGNH 149 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~~ 149 (676)
.++|+|||+||.... +.+.+++...++.|+.++.++++++... ....++|++||... ++...
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------- 164 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG-------- 164 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------
Confidence 379999999997532 1234556788999999999999877532 11357889888443 33211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC---CC-C----hHHHHHHHHHCCCCceeec
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---PE-K----LIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~---~~-~----~~~~~~~~~~~~~~~~~~~ 218 (676)
...|+.+|...|.+++.++++. ++++.+++||.+..+... +. . .+..+......+.+ +
T Consensus 165 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l-- 233 (280)
T PLN02253 165 -------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN--L-- 233 (280)
T ss_pred -------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC--C--
Confidence 2359999999999999887764 799999999999876421 11 0 11111111111111 1
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
....++.+|++++++.++.... .++.+++.+|...+
T Consensus 234 ----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~ 272 (280)
T PLN02253 234 ----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT 272 (280)
T ss_pred ----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence 0134789999999999886432 46778888775433
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.1e-17 Score=159.13 Aligned_cols=223 Identities=14% Similarity=0.133 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||++++++|+++ +++|++++|.........+ .....++..+++|++|++++..+++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQV--EALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 6788888885421111111 11234688999999999998876642
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++... +...++|++||...|.+...
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 149 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--------- 149 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC---------
Confidence 3699999999986532 123455677899999999999887532 11358999999877754321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++++. |+++++++||.+..+.................. ++ ...++.
T Consensus 150 -----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~ 215 (248)
T TIGR01832 150 -----VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--IP-------AGRWGT 215 (248)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--CC-------CCCCcC
Confidence 2359999999999999988874 899999999999877532100000111111111 11 125788
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|+|++++.++.... .++.+.+.++
T Consensus 216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 216 PDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 9999999999986432 3555555444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-17 Score=162.06 Aligned_cols=224 Identities=15% Similarity=0.132 Sum_probs=153.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
++|+||||||+|+||+++++.|+++ +++|++..+..... .+.+.. .....++.++.+|++|.+++.++++.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999 56777665532111 000000 01234688999999999998877643
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +...+++...++.|+.++.++++++.... .-.++|++||...+....
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p---------- 154 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP---------- 154 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----------
Confidence 368999999987543 22344567789999999999998877532 135788888754443221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...|.+++.+++++ ++++++++||.+...... ....+.. .....+. + ...++
T Consensus 155 ----~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~---~~~~~~~-~~~~~~~---~------~~~~~ 217 (258)
T PRK09134 155 ----DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ---SPEDFAR-QHAATPL---G------RGSTP 217 (258)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc---ChHHHHH-HHhcCCC---C------CCcCH
Confidence 12369999999999999987764 489999999988764321 1112222 1211111 1 24678
Q ss_pred HHHHHHHHHHHhcCC-CCceEEEcCCCcccH
Q 005818 230 EDVAEAFDTILHKGE-VGHVYNIGTKKERRV 259 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s~ 259 (676)
+|+|++++.+++++. .++.|++.++..+++
T Consensus 218 ~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 218 EEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred HHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence 999999999998754 567888888764443
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=7e-17 Score=159.77 Aligned_cols=223 Identities=19% Similarity=0.182 Sum_probs=153.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.+++++||||||+|+||+++++.|+++ +++|+++++...... ... .....++.++++|++|++++.++++.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~--~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGS--KVA-KALGENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHH--HHH-HHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 355789999999999999999999999 678888876532111 000 01134678999999999988665532
Q ss_pred -CCCCEEEEccccCCcC------CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++... .+..++|++||...+.+...
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~-------- 153 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD-------- 153 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------
Confidence 2689999999986432 233456688999999999999998631 11368999999655433221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...|.+++.++.++ ++++.+++||.+.++....... ..+..... .. .+. ..+.+
T Consensus 154 ------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~-~~-~~~-------~~~~~ 217 (255)
T PRK05717 154 ------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA-EPLSEADH-AQ-HPA-------GRVGT 217 (255)
T ss_pred ------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc-hHHHHHHh-hc-CCC-------CCCcC
Confidence 3459999999999999988875 5899999999999875321111 11111111 11 110 13678
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+|++.++..+++... .++.+.+.++.
T Consensus 218 ~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 218 VEDVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 8999999988886432 46677776553
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-17 Score=159.37 Aligned_cols=223 Identities=18% Similarity=0.154 Sum_probs=152.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|.+++||||||||+||++++++|+++ +++|++..|........... ......++..+.+|+.|.+.+.++++.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44589999999999999999999999 56776666643211000000 011234688999999999998877643
Q ss_pred -CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecc-cccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTD-EVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~-~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+...... ..+.+...+..|+.++.++++++.... ..++||++||. ++++...
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~--------- 151 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG--------- 151 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC---------
Confidence 37899999999765321 223445678899999999998887531 25689999995 3333221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+++.++++ .++++++++||.+.++... .....+........+. ..+.
T Consensus 152 ------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~ 214 (248)
T PRK05557 152 ------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD--ALPEDVKEAILAQIPL---------GRLG 214 (248)
T ss_pred ------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc--ccChHHHHHHHhcCCC---------CCCc
Confidence 345999999999888876654 3799999999998665432 2222333333222211 1367
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+.+|+++++..++... ..++.|++.++.
T Consensus 215 ~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 215 QPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred CHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 8899999998887652 256789998763
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=157.42 Aligned_cols=221 Identities=18% Similarity=0.149 Sum_probs=154.0
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.++.++||||||+|+||+++++.|+++ +++|++++|.... ....++.++++|+.|++.+.++++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPD---------DLPEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhh---------hcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 6788888886421 1134688999999999988766532
Q ss_pred -CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 -EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+|+.... ..+.+++...+++|+.++.++.+++. +.+ ..++|++||...+....
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~------- 146 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP------- 146 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC-------
Confidence 368999999996421 12344567788999999988876553 333 46899999976543211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHH-----------HHHHHHHCC-CC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP-----------KFILLAMKG-KP 213 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~-----------~~~~~~~~~-~~ 213 (676)
.+...|+.+|...+.+++.++.++ |+++.+++||.+.++... .+.. ...+.+... ..
T Consensus 147 ------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T PRK06523 147 ------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV--ALAERLAEAAGTDYEGAKQIIMDSLGG 218 (260)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH--HHHHHHHhhcCCCHHHHHHHHHHHhcc
Confidence 124569999999999988887653 799999999999887531 1111 111111100 00
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
+++ ..+...+|++++++.++... -.++.+.+.++...|
T Consensus 219 ~p~-------~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 219 IPL-------GRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred Ccc-------CCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 111 13557899999999988643 256788888775443
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-17 Score=159.68 Aligned_cols=228 Identities=16% Similarity=0.163 Sum_probs=155.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|.-.|+.++||||||+|+||++++++|+++ +++|++++|...... ...+ .....++.++.+|+++++++..++..
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEEL--RALQPRAEFVQVDLTDDAQCRDAVEQ 76 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHH
Confidence 444566789999999999999999999999 567777777543210 0000 11234688999999999998877743
Q ss_pred -----CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 -----EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+.... ....+++...++.|+.++.++++++... ....+||++||...+.+..
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------- 148 (258)
T PRK08628 77 TVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG-------- 148 (258)
T ss_pred HHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC--------
Confidence 378999999996432 1222456678899999999998877531 1136899999966543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCc
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...|.+++.++.+ .+++++.++||.++++..... ............. ++. +
T Consensus 149 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~-- 215 (258)
T PRK08628 149 ------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---G-- 215 (258)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---c--
Confidence 2456999999999999988764 489999999999999753110 0000111111111 111 0
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..++..+|++++++.++... ..++.|.+.++
T Consensus 216 -~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 216 -HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred -ccCCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence 14678899999999998653 24567777655
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=158.15 Aligned_cols=221 Identities=15% Similarity=0.135 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++|+||||+|+||+++++.|+++ +++|++++|..... .... .....++.++++|+.|.+++..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~--~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASL--EAAR-AELGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHH--HHHH-HHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 67888888853211 1100 01134678899999999887665532
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEec-ccccCCCCCCcCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVST-DEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS-~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++... ....++|++|| .+.|+..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------- 145 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------- 145 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-------------
Confidence 3689999999975432 233456688999999999999999742 11246777777 4444422
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC----CCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF----PEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
....|+.+|...|.+++.++.+. |+++.+++||.++++... .......+.+....+.++. -+
T Consensus 146 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 214 (249)
T PRK06500 146 --NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RF 214 (249)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CC
Confidence 13569999999999998877653 899999999999987421 1122333333333332221 24
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|++++++.++.... .+....+.++
T Consensus 215 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 215 GTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred cCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 578999999999886432 3444545443
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-16 Score=153.09 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----cC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----TE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----~~ 80 (676)
|+.++||||||+|+||++++++|+++ +++|++++|..... ...+++.+|+.|.+++.++++ ..
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD-----------FPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc-----------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 34689999999999999999999999 68888888864210 112578999999998776663 23
Q ss_pred CCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+|+...... +.+++...++.|+.++.++.+++. +.+ ..+||++||...|+...
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------- 135 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFGALD----------- 135 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccCCCC-----------
Confidence 7899999999865422 334556788999999888876654 334 57999999987664322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...|.+++.++.+ +|+++++++||.+..+..... ..............+ . ..+..
T Consensus 136 ----~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~ 202 (234)
T PRK07577 136 ----RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP--M-------RRLGT 202 (234)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC--C-------CCCcC
Confidence 346999999999998876654 489999999999987753211 001111112222111 1 12457
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|++.+++.++..+ ..++.+.+.++.
T Consensus 203 ~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 203 PEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 799999999998754 246677776654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=160.94 Aligned_cols=228 Identities=18% Similarity=0.168 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+........+.++.+|+.|++++.++++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 678888877542210 00110111123567789999999998887743
Q ss_pred --CCCCEEEEccccCCc-------CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 --EKIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+|+.... ..+.+.+...++.|+.++..+++++. +.+ ..+||++||...+......
T Consensus 80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~--- 155 (256)
T PRK09186 80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFE--- 155 (256)
T ss_pred HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccch---
Confidence 248999999975421 22333455677888888877666554 334 5799999996654332211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
..+..+..+...|+.+|...+.+.+.++.+ .++++++++||.++++.. ..+........+ .
T Consensus 156 -~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~---------~ 219 (256)
T PRK09186 156 -IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCN---------G 219 (256)
T ss_pred -hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCC---------c
Confidence 012222223346999999999999877664 479999999999876532 112222211110 1
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+++++|++++++.++.... .++.+.+.+|
T Consensus 220 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred cCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 147899999999999996532 4666766665
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=155.80 Aligned_cols=221 Identities=15% Similarity=0.085 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.+++|||||+|+||+++++.|+++ +++|++++|.... .....+++++++|+.|++++.+++..
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999998 6788888886421 11234688999999999998877643
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++... +...+||++||...+.+..
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 143 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP---------- 143 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----------
Confidence 3689999999875422 233455678899999999999887641 1136899999976543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...|.+++.++.++ .+++..++||.+..+......-............ +. ..+...
T Consensus 144 ----~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~p 210 (252)
T PRK07856 144 ----GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATV--PL-------GRLATP 210 (252)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcC--CC-------CCCcCH
Confidence 23569999999999999988764 3788999999997764311000011111111111 11 135678
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 230 EDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
+|++++++.++.... .+..+.+.+|...+
T Consensus 211 ~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 211 ADIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred HHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 999999999886432 56778887775433
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.3e-17 Score=160.15 Aligned_cols=209 Identities=17% Similarity=0.120 Sum_probs=146.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||+++++.|+++ +++|++++|...... .+.+ .....++.++.+|+.|++.+..++..
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQEL--ADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999 578888888642211 0001 11234688899999999998887743
Q ss_pred CCCCEEEEccccCCcCC-----cCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+...... ..+.+...++.|+.++.++++.+... ....++|++||...+.+..
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 145 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP----------- 145 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-----------
Confidence 27899999998765332 22234567899999999999888531 1247899999977664322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+...|+.+|...|.+.+.++.. .++++++++||.+..+.... .. . ..+.. ....+.+...++++
T Consensus 146 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~--~~----~--~~~~~--~~~~~~~~~~~~~~ 212 (263)
T PRK06181 146 ---TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR--AL----D--GDGKP--LGKSPMQESKIMSA 212 (263)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh--hc----c--ccccc--cccccccccCCCCH
Confidence 2356999999999998876543 48999999999998764310 00 0 00111 11112222368999
Q ss_pred HHHHHHHHHHHhcC
Q 005818 230 EDVAEAFDTILHKG 243 (676)
Q Consensus 230 ~D~a~ai~~~~~~~ 243 (676)
+|++++++.+++..
T Consensus 213 ~dva~~i~~~~~~~ 226 (263)
T PRK06181 213 EECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHHHhhCC
Confidence 99999999999753
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=149.43 Aligned_cols=200 Identities=17% Similarity=0.213 Sum_probs=155.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-----------------------eeeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-----------------------FEYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-----------------------v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
..+-|.|||||+|++++.+|.+.|.+ |-+.+.|+.|++++.++++-. .+|||+.|
T Consensus 62 iVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~s--NVVINLIG 139 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHS--NVVINLIG 139 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhC--cEEEEeec
Confidence 46889999999999999999999953 466778899999999999988 99999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhH
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTK 520 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK 520 (676)
.- .+.....+.++|+.++..|++.|++.|+ |+||+|+-. . -....+-|-.||
T Consensus 140 rd-------~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg---a-----------------nv~s~Sr~LrsK 192 (391)
T KOG2865|consen 140 RD-------YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG---A-----------------NVKSPSRMLRSK 192 (391)
T ss_pred cc-------cccCCcccccccchHHHHHHHHHHhhChhheeehhhcc---c-----------------cccChHHHHHhh
Confidence 43 2334456779999999999999999998 889988642 0 012237799999
Q ss_pred HHHHHHHHHc-cCeEEEEeeecccCCCCChH-HHHHH---HHh-cCcee--ccC----CCccchhhHHHHHHHHHhcCC-
Q 005818 521 AMVEELLKEY-DNVCTLRVRMPISSDLNNPR-NFITK---ISR-YNKVV--NIP----NSMTILDELLPISVEMAKRNL- 587 (676)
Q Consensus 521 ~~~E~~~~~~-~~~~~l~~~~~r~~~~~g~~-~~~~~---~~~-~~~~~--~~~----~~~~~v~D~a~~~~~~~~~~~- 587 (676)
..+|..+++. ++ .+++||..+||.. .|+.. +.+ ..... ..+ ..++||-|+|.+|+.+.+.+.
T Consensus 193 ~~gE~aVrdafPe-----AtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s 267 (391)
T KOG2865|consen 193 AAGEEAVRDAFPE-----ATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS 267 (391)
T ss_pred hhhHHHHHhhCCc-----ceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccc
Confidence 9999999885 43 4678999999874 33322 222 22211 112 189999999999999998873
Q ss_pred -CceeEccCCCcccHHHHHHHHHhhcCCCCcc
Q 005818 588 -SGIWNFTNPGVVSHNEILEMYKAYIDPGFKW 618 (676)
Q Consensus 588 -~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~ 618 (676)
+.+|.+++|..+.+.|+++.+-+.......+
T Consensus 268 ~Gktye~vGP~~yql~eLvd~my~~~~~~~ry 299 (391)
T KOG2865|consen 268 MGKTYEFVGPDRYQLSELVDIMYDMAREWPRY 299 (391)
T ss_pred cCceeeecCCchhhHHHHHHHHHHHHhhcccc
Confidence 3599999999999999999998877553333
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-16 Score=157.01 Aligned_cols=223 Identities=17% Similarity=0.178 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+..+++|||||+|+||+.+++.|+++ +++|++.+|.................++..+++|+.|.+++.++++.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 56888888764211000000011244688899999999988776643
Q ss_pred CCCCEEEEccccCCc-------------CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCC
Q 005818 80 EKIDTIMHFAAQTHV-------------DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-------------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~ 142 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++.+++.. ...-.++|++||...|+...
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~- 159 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG- 159 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC-
Confidence 368999999996432 112234556778999999887764432 21124799999987665432
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC
Q 005818 143 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
...|+.+|...|.+++.++++ .+++++.++||.+.++... ...+..........+.
T Consensus 160 --------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~~----- 218 (253)
T PRK08217 160 --------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA--AMKPEALERLEKMIPV----- 218 (253)
T ss_pred --------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc--ccCHHHHHHHHhcCCc-----
Confidence 346999999999998887764 4899999999999887652 2223333333332221
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKK 255 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~ 255 (676)
..+.+.+|+++++..+++... .+++|+++++.
T Consensus 219 ----~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 219 ----GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred ----CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 136688999999999887543 67789988764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=157.62 Aligned_cols=221 Identities=14% Similarity=0.108 Sum_probs=146.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|++||||||+|+||+++++.|+++ +++|++. .|..... +... ......++..+++|+.|++++.+++..
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAA--QEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHH--HHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 368999999999999999999999 5677653 3432110 0000 011134578899999999998887743
Q ss_pred -CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHcC------CCceEEEEecccccCCCCCCcCCC
Q 005818 80 -EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKITG------QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~------~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++...- ...+||++||...+.+..+.
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~---- 152 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE---- 152 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc----
Confidence 3689999999975321 2233455788999999988887654321 12469999997554322111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...|.+++.++.+ .+++++++||+.++++....... +..........+..
T Consensus 153 ---------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~--------- 213 (247)
T PRK09730 153 ---------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPMQ--------- 213 (247)
T ss_pred ---------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCCC---------
Confidence 124999999999998877654 38999999999999986432222 12222222222211
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
...+.+|++++++.++... ..+..|++.++
T Consensus 214 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 214 RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 1236899999999988654 24556766553
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.2e-17 Score=158.56 Aligned_cols=203 Identities=19% Similarity=0.133 Sum_probs=146.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++|+||||+|+||.++++.|+++ +++|++++|...... ...+ .....++.++.+|+++++++.+++..
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEV--EAYGVKVVIATADVSDYEEVTAAIEQLKN 80 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999 578888888642211 0011 11234688999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++... ...+++|++||...+.+..
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------- 151 (239)
T PRK07666 81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA--------- 151 (239)
T ss_pred HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC---------
Confidence 3799999999875432 233445678899999999999887632 1257899999966543322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...+.+++.++.+ .|++++++|||.+..+...... ...+ .+ ..++
T Consensus 152 -----~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~~-------~~---~~~~ 208 (239)
T PRK07666 152 -----VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG--------LTDG-------NP---DKVM 208 (239)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc--------cccc-------CC---CCCC
Confidence 2345999999999998877654 4899999999999876431110 0001 11 1367
Q ss_pred eHHHHHHHHHHHHhcC
Q 005818 228 YCEDVAEAFDTILHKG 243 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~ 243 (676)
..+|++++++.+++++
T Consensus 209 ~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 209 QPEDLAEFIVAQLKLN 224 (239)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 8899999999999865
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=155.06 Aligned_cols=190 Identities=18% Similarity=0.121 Sum_probs=140.7
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
+.++||||||+|+||+++++.|+++ ++ +|++++|...... . ...+++++.+|+.|++.+.+++... ++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id 75 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVT-----D--LGPRVVPLQLDVTDPASVAAAAEAASDVT 75 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhh-----h--cCCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence 4579999999999999999999999 55 7888888642211 1 3457899999999999998888543 589
Q ss_pred EEEEccccCC-c----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 84 TIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 84 ~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
+|||+|+... . ..+.+++...++.|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~------------- 141 (238)
T PRK08264 76 ILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP------------- 141 (238)
T ss_pred EEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC-------------
Confidence 9999999832 1 223345567889999999999988653 33 57899999977664332
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
+...|+.+|...|.+.+.++... +++++++||+.+.++.... .. + ..+..+|
T Consensus 142 -~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~--------------~~------~----~~~~~~~ 196 (238)
T PRK08264 142 -NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG--------------LD------A----PKASPAD 196 (238)
T ss_pred -CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc--------------CC------c----CCCCHHH
Confidence 23569999999999998877653 8999999999987653210 00 0 1455677
Q ss_pred HHHHHHHHHhcC
Q 005818 232 VAEAFDTILHKG 243 (676)
Q Consensus 232 ~a~ai~~~~~~~ 243 (676)
++..++..++..
T Consensus 197 ~a~~~~~~~~~~ 208 (238)
T PRK08264 197 VARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHhCC
Confidence 777777777643
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=156.49 Aligned_cols=220 Identities=18% Similarity=0.177 Sum_probs=153.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||++++++|+++ +++|++++|..... ..... ......++.++.+|+.|.+.+.++++.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDC-AKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHH-HHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999 67888888864211 11000 011234689999999999998877643
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+++.... +.+.+++...++.|+.++.++.+++ ++.+ ..+||++||...+.+...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~--------- 148 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFG--------- 148 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCC---------
Confidence 369999999997642 2234456678899999999986544 4444 679999999766643321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ .++++++++||.+.++.... .............+. ..+..
T Consensus 149 -----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~ 212 (245)
T PRK12824 149 -----QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ--MGPEVLQSIVNQIPM---------KRLGT 212 (245)
T ss_pred -----ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh--cCHHHHHHHHhcCCC---------CCCCC
Confidence 235999999999888887653 48999999999998875421 112222222222211 13557
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+|+++++..++.... .++.+++.++.
T Consensus 213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12824 213 PEEIAAAVAFLVSEAAGFITGETISINGGL 242 (245)
T ss_pred HHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 7999999988885432 57889888875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.4e-17 Score=159.67 Aligned_cols=194 Identities=13% Similarity=0.107 Sum_probs=136.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++|+||||+||||++++++|+++|++| .++.+|++|.+.+.++++.+ ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRL 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999754 34678999999998888764 57
Q ss_pred CEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 434 THVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 434 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|+|||+||....... .....+++..+++|+.++.++++++... +..++..+| +. +..
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~--~~----------------~~~ 148 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD--IH----------------AER 148 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC--hh----------------hcC
Confidence 999999996421111 1123445678899999999999999653 222333222 11 122
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCe--EEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..|.+.|+.||..+|.+++.+.+. .+++++.+||+.+++|.. +........+ ...+..++|+++++
T Consensus 149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~ 224 (249)
T PRK09135 149 PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTP----LKRIGTPEDIAEAV 224 (249)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCC----cCCCcCHHHHHHHH
Confidence 4556688999999999999887433 259999999999998851 1111111111 11234689999999
Q ss_pred HHHHhcC---CCceeEccCCCccc
Q 005818 580 VEMAKRN---LSGIWNFTNPGVVS 600 (676)
Q Consensus 580 ~~~~~~~---~~g~yn~~~~~~~s 600 (676)
..++... .+.+||++++..++
T Consensus 225 ~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 225 RFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HHHcCccccccCcEEEECCCeecc
Confidence 7666432 23489999987765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.5e-17 Score=160.81 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=142.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
++|+|+||||+|+||++|+++|+++|++| .++.+|+.|++.+.+++++. +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999999999863 45678999999998887654 6
Q ss_pred CCEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHH----HcCC-cEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCR----ENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||....+.. ....++....+++|+.++.++++++. +.+. +++++||...+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~--------------- 149 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG--------------- 149 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC---------------
Confidence 7999999996521111 11234456778999999999999883 4444 6777777665521
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH---HHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
..+...|+.+|...|.+++.+.+ ..+++++.+||+.++++.. +............ ...+++.+|+++++.
T Consensus 150 ---~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~ 225 (249)
T PRK12825 150 ---WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETP-LGRSGTPEDIARAVA 225 (249)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCC-CCCCcCHHHHHHHHH
Confidence 12346799999999999877633 3689999999999998851 1111111100111 225889999999999
Q ss_pred HHHhcCC----CceeEccCCCcc
Q 005818 581 EMAKRNL----SGIWNFTNPGVV 599 (676)
Q Consensus 581 ~~~~~~~----~g~yn~~~~~~~ 599 (676)
.+++... +.+|+++++..+
T Consensus 226 ~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 226 FLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred HHhCccccCcCCCEEEeCCCEee
Confidence 9997642 359999987654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=155.83 Aligned_cols=222 Identities=16% Similarity=0.081 Sum_probs=152.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.++++|||||+|+||++++++|+++ +++|++.+|...... ...+ .....++..+.+|++|++.+.++++.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKL--RQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHH--HhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999 678888888642110 0011 11134578889999999998877642
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++... .+..+||++||.....+.
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 152 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR----------- 152 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-----------
Confidence 368999999997542 2234456678999999999998877642 124689999996432111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
.+...|+.+|...+.+++.++.+. |+++.+++||++..+......-...+........+ . ..+..
T Consensus 153 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p--~-------~~~~~ 220 (254)
T PRK08085 153 ---DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP--A-------ARWGD 220 (254)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC--C-------CCCcC
Confidence 123569999999999999987763 89999999999988754211001112222222211 1 13677
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|++.+++.++.... .++...+.+|
T Consensus 221 ~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 221 PQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred HHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 8999999998886432 4566666554
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.4e-17 Score=160.40 Aligned_cols=208 Identities=13% Similarity=0.112 Sum_probs=140.4
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCC-hHHHHHHh-hccCCCEEEEC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLEN-RSQLLADI-QNVKPTHVFNA 439 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d-~~~~~~~~-~~~~~d~Vih~ 439 (676)
..+|+|+||||||+||+.|+++|+++|++| .++.+|++| .+.+.+.+ .++ |+|||+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~--d~vi~~ 92 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDS--DAVICA 92 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCC--CEEEEC
Confidence 345799999999999999999999999765 345678887 45666666 444 999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
++.. . ..++...+++|..++.++++++++.++ ++|++||..+|+.....+ +.....+..+...|..
T Consensus 93 ~g~~---~----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~------~~~~~~~~~~~~~~~~ 159 (251)
T PLN00141 93 TGFR---R----SFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQI------LNPAYIFLNLFGLTLV 159 (251)
T ss_pred CCCC---c----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccc------cCcchhHHHHHHHHHH
Confidence 8854 1 112334467899999999999999886 677778888875321111 0000001111223456
Q ss_pred hHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC--CceeEccC-
Q 005818 519 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL--SGIWNFTN- 595 (676)
Q Consensus 519 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~- 595 (676)
+|..+|++++. .+++++++||+.+++....- ....... ......+++.+|+|++++.++..+. ..++.+.+
T Consensus 160 ~k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~-~~~~~~~-~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~ 233 (251)
T PLN00141 160 AKLQAEKYIRK----SGINYTIVRPGGLTNDPPTG-NIVMEPE-DTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVAR 233 (251)
T ss_pred HHHHHHHHHHh----cCCcEEEEECCCccCCCCCc-eEEECCC-CccccCcccHHHHHHHHHHHhcChhhcCcEEEEecC
Confidence 79999988764 47899999999998753110 0000000 0111257999999999999998764 35677775
Q ss_pred --CCcccHHHHHHHHHh
Q 005818 596 --PGVVSHNEILEMYKA 610 (676)
Q Consensus 596 --~~~~s~~e~~~~i~~ 610 (676)
+...++.+++..+++
T Consensus 234 ~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 234 ADAPKRSYKDLFASIKQ 250 (251)
T ss_pred CCCCchhHHHHHHHhhc
Confidence 334788888888765
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=155.85 Aligned_cols=224 Identities=14% Similarity=0.120 Sum_probs=155.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... +.+.. .....++.++.+|++|.+++.+++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAA--NHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 67788877753211 11000 01133678899999999998776532
Q ss_pred --CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++... ....++|++||.....+.
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 153 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------- 153 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------
Confidence 368999999997543 2233455567899999999999988631 113589999996543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
.+...|+.+|...+.+++.++.+ .++++.++.||.+..+.... ...+.+........++ ..+..
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~~ 220 (255)
T PRK06113 154 ---INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPI---------RRLGQ 220 (255)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc-ccCHHHHHHHHhcCCC---------CCCcC
Confidence 12356999999999999988764 37999999999997764321 1122232332222111 13568
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
.+|++++++.++.... .++.+++.++..
T Consensus 221 ~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 221 PQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence 8999999999986532 467888887753
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-16 Score=156.73 Aligned_cols=223 Identities=12% Similarity=0.045 Sum_probs=152.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||.+++++|+++ +++|++++|..... +.+.. .....++.++.+|++|++++.+++..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQL--DEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999998 67898888864211 11100 11134688999999999998877643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++++++... ....+||++||.....+
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------- 153 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA---------- 153 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC----------
Confidence 3799999999875432 233456678899999999999998641 22578999999533211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
..+...|+.+|..++.+++.++.+. .++++.+.||.+..+......--..+........+ ...+.
T Consensus 154 ----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 220 (263)
T PRK07814 154 ----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLG 220 (263)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCc
Confidence 1234569999999999999888764 57888999999876532110000112112111111 11356
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+|++++++.++... ..++.+.+.++
T Consensus 221 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 221 DPEDIAAAAVYLASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 7899999999998643 24556666554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=164.19 Aligned_cols=186 Identities=14% Similarity=0.100 Sum_probs=132.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++|+||||+|+||.++++.|+++ +++|++.+|...... ...+. .....+.++.+|+.|.+++.+++..
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELG--IPPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh--ccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 578888887542211 11111 1134688999999999998877743
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cC-CCceEEEEecccccCCCCC-Cc--
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TG-QIKRFIHVSTDEVYGETDE-DA-- 144 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~~v~~SS~~vyg~~~~-~~-- 144 (676)
.++|+|||+||.... ..+.+++...+++|+.|+.++++++.. .+ ...++|++||...+..... ..
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~ 159 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI 159 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence 259999999997532 224445678899999999999887764 22 1259999999766532111 00
Q ss_pred CCC------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCCccCCC
Q 005818 145 VVG------------------NHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPN 194 (676)
Q Consensus 145 ~~~------------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~l~~~ilR~~~i~G~~ 194 (676)
... ..+..+..|...|+.||+..+.+++++++++ |+++++++||+|++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 000 0011234567789999999988888877764 7999999999998644
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-16 Score=154.30 Aligned_cols=225 Identities=19% Similarity=0.155 Sum_probs=152.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|...++.|+++||||+|+||+++++.|+++ +++|++..+.... ..+.+. ..++.++.+|+.|++++.+++..
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~-~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAEN-EAKELR----EKGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHH-HHHHHH----hCCCeEEEecCCCHHHHHHHHHHH
Confidence 444456789999999999999999999999 5677776554321 111111 11578899999999998887743
Q ss_pred ----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHH----HHHHcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLE----ACKITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+.... ..+.+++...++.|+.++..+.+ .+++.+ ..++|++||...++...
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~------ 146 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAA------ 146 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCC------
Confidence 379999999988542 22344566788999999766544 344333 46999999977764321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC---CChHHHHHHHHHCCCCceeecCCC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.....|+.+|...+.+++.++.+ .|+++.+++||.+-.+.... ......+........+
T Consensus 147 -------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------- 211 (255)
T PRK06463 147 -------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV-------- 211 (255)
T ss_pred -------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC--------
Confidence 11345999999999999988765 48999999999986553211 1111112122222111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...+...+|++++++.++.... .++.+.+.+|.
T Consensus 212 -~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 212 -LKTTGKPEDIANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred -cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 1235678999999999986532 46778887665
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=179.49 Aligned_cols=232 Identities=18% Similarity=0.130 Sum_probs=161.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+.+++||||||+|+||++++++|+++ +++|++++|...... .... .....++..+.+|++|++++.+++..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~--~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAE--AAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHH--HHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 578998888653211 1000 00014788999999999998877643
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+.-.+||++||...+....
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~--------- 566 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP--------- 566 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC---------
Confidence 2799999999976432 2334566788999999999977664 323116899999965543222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCcc-CCCCCCCChHHHHHHHHHCCCCc----eeecCCCc
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVY-GPNQFPEKLIPKFILLAMKGKPL----PIHGDGSN 222 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~-G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.++ |+++.+++|+.+| +.+........ .+....+... .....+..
T Consensus 567 -----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~ 639 (681)
T PRK08324 567 -----NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE--ARAAAYGLSEEELEEFYRARNL 639 (681)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh--hhhhhccCChHHHHHHHHhcCC
Confidence 13569999999999999987765 6999999999998 65432221110 0111111111 02233445
Q ss_pred eEeeeeHHHHHHHHHHHHhc---CCCCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHK---GEVGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~---~~~~~~y~i~~~~~ 256 (676)
.+.+++++|++++++.++.. ...+++|++.+|..
T Consensus 640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 56799999999999998842 23577899998864
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-17 Score=160.14 Aligned_cols=221 Identities=20% Similarity=0.296 Sum_probs=155.1
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEcc
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFA 89 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~a 89 (676)
|+|+||||.+|+++++.|++. +++|.++.|.......+.+. ..+++.+.+|+.|++++.+++ .++|+||.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~~al--~g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLVAAL--KGVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHHHHH--TTCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHHHHH--cCCceEEeec
Confidence 799999999999999999996 78888888865332222221 247889999999999999999 8999999887
Q ss_pred ccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005818 90 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 169 (676)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 169 (676)
+.... .......+++++|++.| +++||+.|....+.... ...|..+.-..|...|+
T Consensus 73 ~~~~~------------~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~-----------~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 73 PPSHP------------SELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESS-----------GSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp SCSCC------------CHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTT-----------TSTTHHHHHHHHHHHHH
T ss_pred Ccchh------------hhhhhhhhHHHhhhccc-cceEEEEEecccccccc-----------cccccchhhhhhhhhhh
Confidence 75431 12445788999999999 99999755544432111 11223345567888887
Q ss_pred HHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHH-HHCC--CCceeecCCCceEeee-eHHHHHHHHHHHHhcCCC
Q 005818 170 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL-AMKG--KPLPIHGDGSNVRSYL-YCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 170 ~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~v-~v~D~a~ai~~~~~~~~~ 245 (676)
.+++ .+++++++|+|..+... +..+... .... ..+.+.+++.....++ +.+|+++++..++..+..
T Consensus 129 ~l~~----~~i~~t~i~~g~f~e~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~ 198 (233)
T PF05368_consen 129 YLRE----SGIPYTIIRPGFFMENL------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK 198 (233)
T ss_dssp HHHH----CTSEBEEEEE-EEHHHH------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred hhhh----ccccceeccccchhhhh------hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence 7654 48999999999765321 1111110 0111 1356777777777775 999999999999987643
Q ss_pred ---CceEEEcCCCcccHHHHHHHHHHHhCCC
Q 005818 246 ---GHVYNIGTKKERRVIDVATDICKLFSLN 273 (676)
Q Consensus 246 ---~~~y~i~~~~~~s~~el~~~i~~~~g~~ 273 (676)
+..+.+++ +.+|..|+++.+.+.+|++
T Consensus 199 ~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 199 HNNGKTIFLAG-ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp TTEEEEEEEGG-GEEEHHHHHHHHHHHHTSE
T ss_pred hcCCEEEEeCC-CCCCHHHHHHHHHHHHCCc
Confidence 35566655 8899999999999999985
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.6e-16 Score=152.80 Aligned_cols=215 Identities=14% Similarity=0.101 Sum_probs=151.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||.++++.|+++ +++|++.+|.... ...+.++++|++|++++.++++.
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~-----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPS-----------YNDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 55689999999999999999999999 6788888875321 12688999999999998877743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+.... +...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 139 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR----------- 139 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC-----------
Confidence 269999999997542 2233456677899999999998877532 1247999999976654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCC-------C--hHHHHHHHHHCCCCceeecCCC
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE-------K--LIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...+.+++.++.+. ++++.+++||.+-.+..... . ............ .+
T Consensus 140 ---~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------ 208 (258)
T PRK06398 140 ---NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM--HP------ 208 (258)
T ss_pred ---CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc--CC------
Confidence 24569999999999999988765 48899999998866532100 0 000001111111 11
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...+...+|++++++.++.... .++.+.+.+|.
T Consensus 209 -~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 209 -MKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred -cCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 1135678999999999886432 56667776663
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=157.91 Aligned_cols=221 Identities=17% Similarity=0.159 Sum_probs=153.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
..++||||||+|+||+++++.|+++ +++|++++|....... ........+..+.+|+++++++.+++.. .
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEV---AAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHH---HHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 6788888886432110 0111124567899999999998877643 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
++|+|||+|+..... ...+++...++.|+.++.++++++... ....+||++||...+.+..
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 156 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE------------ 156 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC------------
Confidence 789999999976432 223345568899999999999987642 1257999999965432211
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
....|+.+|...+.+++.++.+ .|+++..++||.+..+..... +........... .+ ...+.+.+
T Consensus 157 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~--~~-------~~~~~~~~ 224 (255)
T PRK06841 157 --RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA-WAGEKGERAKKL--IP-------AGRFAYPE 224 (255)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc-cchhHHHHHHhc--CC-------CCCCcCHH
Confidence 1245999999999999887776 389999999999987643210 001111111111 11 12478999
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 231 DVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 231 D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
|++++++.++.... .|+.+.+.++.
T Consensus 225 ~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 225 EIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHHHHHHHcCccccCccCCEEEECCCc
Confidence 99999999986532 46777777664
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.6e-16 Score=150.45 Aligned_cols=214 Identities=19% Similarity=0.208 Sum_probs=148.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d 83 (676)
++.++++||||+|+||+++++.|+++ +++|++++|..... ...++..+.+|+.++ +.++++. .++|
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~--~~~~~~~~~~id 69 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD--LEPLFDWVPSVD 69 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc---------cCCcEEEEECChHHH--HHHHHHhhCCCC
Confidence 45689999999999999999999999 67888888753211 134688999999997 4444322 4799
Q ss_pred EEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+|+... .+...+++...++.|+.++.++++++... .+..+||++||...+....+
T Consensus 70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 136 (235)
T PRK06550 70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG------------- 136 (235)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-------------
Confidence 9999998642 12234456678999999999999887532 12458999999765433221
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
...|+.+|...+.+++.++.++ |+++++++||.+.++..........+........+ ...+...+|+
T Consensus 137 -~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 206 (235)
T PRK06550 137 -GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEV 206 (235)
T ss_pred -CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHH
Confidence 2359999999999888877754 89999999999988754211001112222222211 1136778999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCC
Q 005818 233 AEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 233 a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+++++.++.... .++++.+.+|
T Consensus 207 a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 207 AELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHHHHcChhhccCCCcEEEECCc
Confidence 999999986432 4566777655
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.4e-16 Score=154.08 Aligned_cols=224 Identities=17% Similarity=0.126 Sum_probs=150.6
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|.+ +++++||||||+|+||+++++.|+++ ++.|++.+|.... .+.+. .....+++++.+|+.|.+++.++++.
T Consensus 1 ~~~-~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~--~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 1 MFD-LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEK--LEALA-AELGERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CcC-CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHH-HHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 554 45789999999999999999999999 5677776664321 11111 11134688899999999998877632
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++... .+..+||++||...+.+...
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------ 148 (245)
T PRK12936 75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG------ 148 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC------
Confidence 3699999999976432 233456678899999999998876431 12578999999644322221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+++.++.+ .++++++++||.+..+.... ............ .+ ...
T Consensus 149 --------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~--~~-------~~~ 209 (245)
T PRK12936 149 --------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK--LNDKQKEAIMGA--IP-------MKR 209 (245)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc--cChHHHHHHhcC--CC-------CCC
Confidence 235999999888887766554 37999999999886653311 111111111111 11 113
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+...+|+++++..++.... .++.+++.++.
T Consensus 210 ~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 210 MGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred CcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 5678999999988875432 46788888763
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-16 Score=154.10 Aligned_cols=216 Identities=18% Similarity=0.154 Sum_probs=149.8
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----CCC
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-----EKI 82 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~~ 82 (676)
||||||+|+||++++++|+++ +++|++++|..... ...+. ......++.++.+|++|+++++++++. .++
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEG-AEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999 67888887754111 00000 011133578999999999998887643 368
Q ss_pred CEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecc-cccCCCCCCcCCCCCCCCCC
Q 005818 83 DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTD-EVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 83 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~-~vyg~~~~~~~~~~~e~~~~ 154 (676)
|+|||+|+..... .+.+++...++.|+.++.++++++... ....+||++||. ++||...
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~------------- 144 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG------------- 144 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-------------
Confidence 9999999986432 233455678899999999999988653 125699999995 4444321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
...|+.+|...+.+++.++++ .|+++++++|+.+.++... .....+........+. ..+.+++|
T Consensus 145 --~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~ 211 (239)
T TIGR01830 145 --QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD--KLSEKVKKKILSQIPL---------GRFGTPEE 211 (239)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh--hcChHHHHHHHhcCCc---------CCCcCHHH
Confidence 345999999999888877665 4899999999998765332 1112222222222111 13667899
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCC
Q 005818 232 VAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 232 ~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
++++++.++... ..+++||+.++
T Consensus 212 ~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 212 VANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 999999888543 25678998754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=156.00 Aligned_cols=197 Identities=15% Similarity=0.167 Sum_probs=140.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS-RLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
+++||||||+|+||+++++.|+++ +++|++++|..... ...... ....++.++.+|++|++++.++++. .
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDAL--QAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 479999999999999999999999 67888888864221 111100 0111688999999999998877632 2
Q ss_pred CCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHH----HHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLE----ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.+|++||+|+..... .+.+++...+++|+.++.++++ ++++.+ ..+||++||...+.+..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~---------- 146 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLP---------- 146 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC----------
Confidence 489999999975421 2234566788999999999877 444444 57899999965442221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
....|+.+|...+.+++.++. .+|+++++++||.+.++..... ....+ .++.
T Consensus 147 ----~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~---------~~~~ 201 (257)
T PRK07024 147 ----GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN------------PYPMP---------FLMD 201 (257)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC------------CCCCC---------CccC
Confidence 134599999999999988764 3589999999999987743110 00000 1357
Q ss_pred HHHHHHHHHHHHhcC
Q 005818 229 CEDVAEAFDTILHKG 243 (676)
Q Consensus 229 v~D~a~ai~~~~~~~ 243 (676)
.+++++.++.++++.
T Consensus 202 ~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 202 ADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHHHHhCC
Confidence 899999999999754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=157.51 Aligned_cols=165 Identities=15% Similarity=0.178 Sum_probs=124.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc------
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT------ 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~------ 79 (676)
++++||||||+|+||+++++.|+++ +++|++.+|.... ...+. ..+++++.+|++|.+++..+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~--~~~l~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEED--VAALE----AEGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH----HCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999998 6889988886421 11111 12578899999999988777643
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHH----HHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYG----THVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+...... +.++....+++|+.| +.+++..+++.+ ..+||++||...+.+.
T Consensus 75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~----------- 142 (277)
T PRK05993 75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM----------- 142 (277)
T ss_pred CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC-----------
Confidence 26899999998765322 233455788999999 556666666655 6799999996544221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGP 193 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~ 193 (676)
.+...|+.+|...|.+++.++. .+|+++++++||.+-.+
T Consensus 143 ---~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 143 ---KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred ---CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 2245799999999999887654 35899999999998765
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.7e-16 Score=155.78 Aligned_cols=222 Identities=18% Similarity=0.159 Sum_probs=148.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+++||||||+|+||+++++.|+++ +++|++++|.................++.++++|++|++.+.+++.. .
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3579999999999999999999999 67888888764211000000011134678899999999988777643 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+|+..... .+.+++...+++|+.++..+++++... +...++|++||...+.+..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP----------- 147 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------
Confidence 699999999875422 123345678899999988877766532 2135899999965432221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHH----------H-HHHHHCCCCceeec
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPK----------F-ILLAMKGKPLPIHG 218 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~----------~-~~~~~~~~~~~~~~ 218 (676)
....|+.+|...+.+++.++.+ .|+++++++||.+..+... ..... + ....... ++
T Consensus 148 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 217 (256)
T PRK08643 148 ---ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF--DIAHQVGENAGKPDEWGMEQFAKD--IT--- 217 (256)
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh--HHHhhhccccCCCchHHHHHHhcc--CC---
Confidence 1346999999999988887764 4899999999999876431 00000 0 0001110 11
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
...+...+|++.++..++... ..++.+.+.+|
T Consensus 218 ----~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 218 ----LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred ----CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 113567899999999988643 25667777655
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=154.77 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=148.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++++++|||||+|+||+++++.|+++ +++|++..+..... .+.. ........+..+.+|+.+.+.+..+++.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEE-AEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHH-HHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67777654321111 0000 0011133567889999998877654421
Q ss_pred --------CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCC
Q 005818 80 --------EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 --------~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||..... .+.+++...+++|+.++..+++++... ....+||++||...+....
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 153 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP----- 153 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC-----
Confidence 2699999999975322 223345678889999999999877643 1135899999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHH-HHHHHHHCCCCceeecCCCc
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP-KFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.++ |+++.++.||.|.++... .... .......... . .
T Consensus 154 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~-~-------~ 214 (252)
T PRK12747 154 ---------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNA--ELLSDPMMKQYATTI-S-------A 214 (252)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhh--hcccCHHHHHHHHhc-C-------c
Confidence 23469999999999998877654 899999999999887531 1100 0111111100 0 0
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+.+.+|+++++..++.... .++.+.+.+|
T Consensus 215 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 215 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence 1247789999999999886432 4667777665
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4e-16 Score=154.57 Aligned_cols=222 Identities=14% Similarity=0.103 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++|+||||+|+||++++++|+++ +++|++++|..... ..+.. .....++..+.+|+.|++++..+++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATL--EAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 67899998864211 11100 01234588999999999998777632
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+++.... +.+.+++...++.|+.++.++.+++.. .+ ..+||++||...+.+..+
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~------- 156 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAG------- 156 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCC-------
Confidence 368999999997543 223345667889999999999976643 33 578999999654432221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|...+.+++.++.+ .++++.+++||.+.++..........+....... .+. ..+
T Consensus 157 -------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~ 220 (256)
T PRK06124 157 -------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TPL-------GRW 220 (256)
T ss_pred -------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CCC-------CCC
Confidence 246999999999998887665 3799999999999988532110011222222221 111 147
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
++.+|++.+++.++..+. .++.+.+.++
T Consensus 221 ~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 221 GRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred CCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 889999999999997643 3555666544
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-16 Score=154.91 Aligned_cols=223 Identities=14% Similarity=0.149 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.++||||||+|+||.++++.|+++ +++|++.+|........... .....++.++++|+.|.+++..+++.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTNWDETRRLI-EKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHH-HhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 67777777752111111100 11234688999999999998877742
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+|+.... ..+.+++...++.|+.++.++.+++.. .+ ..++|++||...+.+...
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------- 159 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKF--------- 159 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCC---------
Confidence 268999999997542 223345667889999998888876653 33 468999999776543321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++++. |+++++++||.+..+.................. ++ ...+..
T Consensus 160 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~ 225 (258)
T PRK06935 160 -----VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGE 225 (258)
T ss_pred -----chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCC
Confidence 2359999999999999888754 799999999999876432110001111111111 11 113677
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|++.++..++.... .++++.+.++
T Consensus 226 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 226 PDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 7999999998886432 5667777665
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.2e-16 Score=154.87 Aligned_cols=203 Identities=14% Similarity=0.075 Sum_probs=145.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++|||||+|+||+.+++.|+++ +++|++++|..... ..+.. .....++.++.+|++|++++..+++.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDAL--EALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999 57888888864221 11100 11234688999999999988777642
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++. +.+ ..++|++||...+++..
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------- 150 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP--------- 150 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC---------
Confidence 3699999999975432 2334556778999999998887763 333 57899999987775433
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...+.+++.++.. .|++++++|||.+-.+........ ... ....++
T Consensus 151 -----~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~------------~~~-----~~~~~~ 208 (241)
T PRK07454 151 -----QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ------------ADF-----DRSAML 208 (241)
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc------------ccc-----ccccCC
Confidence 2346999999999998876543 489999999999977643111100 000 001357
Q ss_pred eHHHHHHHHHHHHhcCC
Q 005818 228 YCEDVAEAFDTILHKGE 244 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~ 244 (676)
..+|+|++++.++..+.
T Consensus 209 ~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 209 SPEQVAQTILHLAQLPP 225 (241)
T ss_pred CHHHHHHHHHHHHcCCc
Confidence 88999999999998764
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=152.92 Aligned_cols=222 Identities=17% Similarity=0.193 Sum_probs=148.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|+.+++|||||+|+||++++++|+++ +++|++..+.......+.+.. .....++..+.+|+.|.+++.+++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 567766443221111000000 11234577889999999998877643
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||.....+.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---------- 147 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ---------- 147 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCC----------
Confidence 379999999997542 22445567888999999888766553 333 5799999995432211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
.....|+.+|...+.+++.++++ .++++.+++||.+.++... ...+..........+. ..+.
T Consensus 148 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~---------~~~~ 212 (246)
T PRK12938 148 ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIPV---------RRLG 212 (246)
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh--hcChHHHHHHHhcCCc---------cCCc
Confidence 12456999999988888776654 4899999999999887542 1122333333222211 1356
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+|++++++.++... ..++.+.+.++
T Consensus 213 ~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 213 SPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred CHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 7899999999888643 24566777654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=153.96 Aligned_cols=224 Identities=14% Similarity=0.118 Sum_probs=154.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+..|++|||||+|+||+++++.|+++ +++|++++|...... ...+.......++.++.+|+.|++++.++++.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888887542211 00111111134688899999999988776632
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+.... ..+.+++...+.+|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~-------- 155 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR-------- 155 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC--------
Confidence 378999999997432 234456677899999999999888742 33 57899999976654433
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+ .+++++.++||.+.++..........+.+......++. -+
T Consensus 156 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~---------~~ 220 (257)
T PRK09242 156 ------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMR---------RV 220 (257)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCC---------CC
Confidence 2345999999999999987665 38999999999998876421111122223222222211 24
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|++.++..++.... .++.+.+.++
T Consensus 221 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 221 GEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 467999999999886432 4566767554
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=154.48 Aligned_cols=221 Identities=15% Similarity=0.104 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||.++++.|+++ +++|+++ +|...... ...+. ....++.++.+|++|++.+.+++..
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIK--EEGGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45679999999999999999999998 6778777 77532110 00001 1234588999999999998777632
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+++..... .+.+++...++.|+.++.++++++... ....+||++||...+.+...
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~------- 151 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC------- 151 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC-------
Confidence 2799999999986422 223345678899999999988877642 11467999999665543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|...+.+++.++.+ .|+++++++||.+..+.... ..+.......... ....+
T Consensus 152 -------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~--~~~~~~~~~~~~~---------~~~~~ 213 (247)
T PRK05565 152 -------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS--FSEEDKEGLAEEI---------PLGRL 213 (247)
T ss_pred -------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc--cChHHHHHHHhcC---------CCCCC
Confidence 235999999888888776664 38999999999997654321 1111111111111 11236
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|++++++.++.... .++.+++.++
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 214 GKPEEIAKVVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred CCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence 688999999999886533 4667777665
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.4e-16 Score=152.74 Aligned_cols=223 Identities=15% Similarity=0.114 Sum_probs=152.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|++|||||+|.||+++++.|+++ +++|++.+|.........+ .....++.++.+|++|++++.++++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQV--EALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHH--HHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 44689999999999999999999999 6788888775321111111 11234688999999999999888743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||..... .+.+++...+++|+.++..+.+++... +.-.++|++||...+.+...
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------- 152 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------- 152 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------
Confidence 3699999999976432 234566788899999999888876532 21258999999776644322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ +|+++..++||.+-.+......-.....+..... ++. . .+..
T Consensus 153 -----~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-----~--~~~~ 218 (251)
T PRK12481 153 -----VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-----S--RWGT 218 (251)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-----C--CCcC
Confidence 235999999999999887764 4899999999999765421100001111111111 111 1 3567
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|++.++..++.... .++.+.+.++
T Consensus 219 peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 219 PDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 8999999999986422 4566666554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.8e-16 Score=151.59 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=153.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++++++|||||+|.||+++++.|+++ +++|+++++.......+.+. .....+..+++|+.|.+++.++++.
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVT--ALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 55689999999999999999999999 67888877643211111111 1134578899999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||..... .+.+++...+++|+.++.++++++... ++-.++|++||...+.+...
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 154 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--------- 154 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC---------
Confidence 3799999999976432 234567788999999999999887542 21258999999876654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...|.+.+.++.+ +|+++..++||.+-.+......-.....+.... .++. ..+..
T Consensus 155 -----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~ 220 (253)
T PRK08993 155 -----VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGL 220 (253)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcC
Confidence 235999999999999888776 489999999999977643110000111111211 1111 13667
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+|++.+++.++.... .++.+.+.++
T Consensus 221 p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 221 PSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 7999999999886532 4555666544
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=153.50 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=151.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|+++||||||+|+||+++++.|+++ +++|++..+...... +.+ .......++.++.+|++|+++++.+++.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGA-KETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR 77 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999 678877654322110 000 0011234688999999999988776643
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... .+.+++...+..|+.++.++++++... ++-.+||++||.....
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------ 145 (256)
T PRK12743 78 LGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------ 145 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------
Confidence 3689999999976432 233456678999999999999887642 1125899999954221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+..+...|+.+|...+.+++.++.+ ++++++.++||.+.++...... .........+ .+. ..+.
T Consensus 146 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~--~~~-------~~~~ 212 (256)
T PRK12743 146 --PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--SDVKPDSRPG--IPL-------GRPG 212 (256)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--hHHHHHHHhc--CCC-------CCCC
Confidence 2223457999999999998887764 3799999999999987542111 1111111111 111 0245
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+.+|++.++..++.... .+..+.+.++.
T Consensus 213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 78999999988886432 46677776663
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-16 Score=153.16 Aligned_cols=222 Identities=22% Similarity=0.197 Sum_probs=151.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+.++||||||+|+||+++++.|+++ ++++++..++.... ...+. ......++.++.+|+.|++++.++++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAA-ADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4589999999999999999999999 56776665543211 00000 011234688999999999998888743
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|+|||+|+.... ....+++...++.|+.++.++++++... ....+||++||...+.+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------ 148 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP------------ 148 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC------------
Confidence 379999999997542 1233345677899999999999887643 1135899999865543221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+...|+.+|...+.+++.++.++ ++++++++||.+-.+..... ..+..........+.. .+.+.+
T Consensus 149 --~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~ 216 (245)
T PRK12937 149 --GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQIDQLAGLAPLE---------RLGTPE 216 (245)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHHHHHHHhcCCCC---------CCCCHH
Confidence 24569999999999998876653 79999999999876642111 1122233333222211 355779
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 231 DVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 231 D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
|+++++..++..+. .+..+++.++
T Consensus 217 d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 217 EIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHHHHcCccccCccccEEEeCCC
Confidence 99999998886532 4667777654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-16 Score=153.83 Aligned_cols=207 Identities=18% Similarity=0.109 Sum_probs=141.9
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EKI 82 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~~ 82 (676)
|+|+||||+|+||.++++.|+++ +++|++++|..... ..+.. ....++.++.+|+.|.+++.++++. .++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERL--QELKD-ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHH-HhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999 67888888864211 11110 1134688999999999998877642 379
Q ss_pred CEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 83 DTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 83 d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
|+|||+||... ...+.+++...++.|+.++.++++++. +.+ ..+||++||...+...
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------- 141 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY------------- 141 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCC-------------
Confidence 99999998642 122344556788999999777666553 334 5799999996543211
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
.+...|+.+|...|.+++.++.+. ++++.+++||.+.|+......+.... .... . .+ .+ ..++..+
T Consensus 142 -~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~~~--~---~~-~~---~~~~~~~ 210 (248)
T PRK10538 142 -AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GKAE--K---TY-QN---TVALTPE 210 (248)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HHHH--h---hc-cc---cCCCCHH
Confidence 224569999999999999887654 79999999999987643111010000 0000 0 00 01 1356889
Q ss_pred HHHHHHHHHHhcCC
Q 005818 231 DVAEAFDTILHKGE 244 (676)
Q Consensus 231 D~a~ai~~~~~~~~ 244 (676)
|+|++++.++..+.
T Consensus 211 dvA~~~~~l~~~~~ 224 (248)
T PRK10538 211 DVSEAVWWVATLPA 224 (248)
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999987553
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-16 Score=153.56 Aligned_cols=227 Identities=17% Similarity=0.146 Sum_probs=155.6
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...++.++||||||+|+||++++++|+++ +++|++++|...... .+.+ .....++..+.+|+.|.+++.++++
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~i~~~~~ 76 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALI--REAGGEALFVACDVTRDAEVKALVE 76 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHH
Confidence 444456689999999999999999999999 678888888643211 0111 1123468899999999998887764
Q ss_pred c-----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCc
Q 005818 79 T-----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
. .++|+|||+|+.... +.+.+++...+++|+.++.++.+++. +.+ ..++|++||...+.+...
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~-- 153 (253)
T PRK06172 77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPK-- 153 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCC--
Confidence 3 268999999997532 22345566788999999988776543 223 468999999776654332
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
...|+.+|...+.+++.++.++ |+++.++.||.+-.+..... ...+..........+ .
T Consensus 154 ------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~---- 215 (253)
T PRK06172 154 ------------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP--V---- 215 (253)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC--C----
Confidence 3469999999999999888764 79999999999866543110 001112122211111 1
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+...+|+++.++.++... -.|+.+.+.+|.
T Consensus 216 ---~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 216 ---GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred ---CCccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 13567899999999988643 256677777653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-16 Score=153.49 Aligned_cols=223 Identities=17% Similarity=0.082 Sum_probs=150.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++++++|||||+|+||.++++.|+++ +++|++++|..... +.+.. .....++.++.+|+.|++++.++++.
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAEL--DQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34579999999999999999999999 67888888864221 11100 11134688899999999988877642
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++. +.+ ..++|++||...+....
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~------- 151 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGF------- 151 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCC-------
Confidence 379999999997532 22334566789999998887765543 333 46899999976542111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
.+...|+.+|...+.+++.++++. |+++.+++||.+-.+........+..........+ ...
T Consensus 152 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~ 216 (254)
T PRK07478 152 ------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKR 216 (254)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCC
Confidence 123469999999999999887764 69999999999977632111101111111111111 113
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+...+|++++++.++.... .++.+.+.++
T Consensus 217 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 217 MAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred CcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 5678999999999886532 4666767654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-16 Score=153.34 Aligned_cols=222 Identities=15% Similarity=0.116 Sum_probs=150.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||.+++++|+++ +++|++++|..... +.+.. ......+..+++|+.|.+++..++..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGC--QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67899888854211 11100 01133578899999999988776632
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+|+.... +...+++...++.|+.++..+++++. +.+ ..++|++||...+.+.
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------- 152 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPG-------- 152 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCC--------
Confidence 268999999986431 22334456788999999998887763 333 5789999995443221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
.+...|+.+|..+|.+++.+++++ |+++..+.||.+-.+.......-..+........+ . ..
T Consensus 153 ------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~-------~~ 217 (252)
T PRK07035 153 ------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP--L-------RR 217 (252)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC--C-------CC
Confidence 124569999999999999887654 79999999999876532110000112222222111 1 13
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+...+|++++++.++.+.. .++.+++.++
T Consensus 218 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 218 HAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred cCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 5677999999999886532 4666777654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=156.68 Aligned_cols=195 Identities=11% Similarity=-0.011 Sum_probs=139.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++++||||+|+||++++++|+++|++| ..+.+|++|++++.++++.. ++|
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 86 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLD 86 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCc
Confidence 689999999999999999999999865 23567999999988877642 579
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+|||+|+.. . ....++...+++|+.++.++++++.+. +.++|++||....... ...+..
T Consensus 87 ~vi~~ag~~---~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~~ 148 (248)
T PRK07806 87 ALVLNASGG---M--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP-------------TVKTMP 148 (248)
T ss_pred EEEECCCCC---C--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc-------------cccCCc
Confidence 999999854 1 112345677899999999999999864 3478888885432111 000111
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc--e----eccCCCccchhhHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK--V----VNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~--~----~~~~~~~~~v~D~a~~~~~~ 582 (676)
..+.|+.||..+|.+++.+. ...++++..++|+.+.++. ...+..... . -.....+++++|++++++.+
T Consensus 149 ~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 226 (248)
T PRK07806 149 EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV--TATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARA 226 (248)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch--hhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHH
Confidence 24679999999999998863 3468999999988777653 111111100 0 00113688999999999999
Q ss_pred HhcC-CC-ceeEccCCCcc
Q 005818 583 AKRN-LS-GIWNFTNPGVV 599 (676)
Q Consensus 583 ~~~~-~~-g~yn~~~~~~~ 599 (676)
++.. .+ .+|++++++.+
T Consensus 227 ~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 227 VTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred hhccccCccEEEecCccce
Confidence 9866 34 48999998654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-16 Score=154.70 Aligned_cols=230 Identities=14% Similarity=0.130 Sum_probs=150.6
Q ss_pred CCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc--ccccCCCC--CCCCCCeEEEEecCCCHHHHHH
Q 005818 1 MATV-YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC--SNLKNLNP--SRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 1 ~~~~-~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
|++. ++.++||||||+|+||.++++.|+++ +++|+++.+.... ...+.+.. .....++.++++|++|++++.+
T Consensus 1 ~~~~~l~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 78 (257)
T PRK12744 1 MADHSLKGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEK 78 (257)
T ss_pred CCCCCCCCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHH
Confidence 5542 44689999999999999999999999 5665555443211 11111000 0113468889999999999987
Q ss_pred HHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEE-ecc-cccCCCCCC
Q 005818 76 ILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHV-STD-EVYGETDED 143 (676)
Q Consensus 76 ~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~-SS~-~vyg~~~~~ 143 (676)
++.. .++|++||+|+.... ..+.+++...+++|+.++..+++++... .+..+++++ ||. +++.+
T Consensus 79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~---- 154 (257)
T PRK12744 79 LFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP---- 154 (257)
T ss_pred HHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC----
Confidence 7643 379999999997532 2234456678899999999999888643 112456665 332 32211
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHH--HHHHCCCCceeec
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFI--LLAMKGKPLPIHG 218 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (676)
....|+.+|...|.+++.++++. |+++++++||.+.++...+........ .......
T Consensus 155 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------ 216 (257)
T PRK12744 155 ------------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALS------ 216 (257)
T ss_pred ------------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccccccccc------
Confidence 13469999999999999988774 699999999999876432211110000 0000011
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcCC--CCceEEEcCCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKGE--VGHVYNIGTKK 255 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~~ 255 (676)
+...+.+.+.+|++.++..+++... .++++++.++.
T Consensus 217 -~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 217 -PFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGY 254 (257)
T ss_pred -ccccCCCCCHHHHHHHHHHhhcccceeecceEeecCCc
Confidence 1111247889999999999998532 46788887764
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-16 Score=154.06 Aligned_cols=224 Identities=13% Similarity=0.109 Sum_probs=155.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcE-EEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYK-IVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~-v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.++|+||||+|+||+.++++|+++ +++ |++++|...... ...+ .....++.++.+|++|++++.+++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAEL--EALGAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHH--HhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999 566 888887532111 0011 11234578899999999998877643
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+|+..... ...+++...++.|+.++.++++++... +...+||++||...++....
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------ 153 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF------ 153 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC------
Confidence 3699999999976422 233344567899999999998877532 11357999999877654332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC-----CChHHHHHHHHHCCCCceeecCC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
...|+.+|...|.+++.++.++ +++++.++||.++++.... ......+........
T Consensus 154 --------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-------- 217 (260)
T PRK06198 154 --------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ-------- 217 (260)
T ss_pred --------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC--------
Confidence 3469999999999999877654 6899999999999886411 001111222221111
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
....+++.+|++++++.++... ..++.+++.++.
T Consensus 218 -~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 218 -PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred -CccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 1224678999999999987543 256777776653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.4e-16 Score=152.42 Aligned_cols=221 Identities=15% Similarity=0.170 Sum_probs=150.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE----- 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~----- 80 (676)
+.++||||||+|+||+++++.|+++ +++|++..+..... .+.+.. ....++.++++|+.|++++.+++...
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~-~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDA-AEALAD-ELGDRAIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHH-HHHHHH-HhCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3479999999999999999999999 57777654432111 111111 11246889999999999988777431
Q ss_pred -CCCEEEEccccCC----------cCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 81 -KIDTIMHFAAQTH----------VDNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 81 -~~d~Vih~a~~~~----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
++|+|||+|+... .+.+.+++...++.|+.++.++++++... ....++|++||.....
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------- 151 (253)
T PRK08642 80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-------- 151 (253)
T ss_pred CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC--------
Confidence 3999999998631 12233455678999999999999988631 1246899999853221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+..|.+.|+.+|...|.+++.+++++ |+++..++||.+..+.... ............. .+.
T Consensus 152 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~-~~~~~~~~~~~~~--~~~------- 215 (253)
T PRK08642 152 ------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA-ATPDEVFDLIAAT--TPL------- 215 (253)
T ss_pred ------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc-cCCHHHHHHHHhc--CCc-------
Confidence 12245679999999999999988763 7999999999987653211 1111222222221 111
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+.+.+|++.++..++... ..|+.+.+.++
T Consensus 216 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 216 RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 24788999999999998643 25677777765
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.7e-16 Score=153.27 Aligned_cols=230 Identities=13% Similarity=0.047 Sum_probs=155.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...++.++||||||+|+||+++++.|+++ +++|++++|...... ...+.......++.++++|++|++++.+++.
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVA 78 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHH
Confidence 444566789999999999999999999999 678888888542111 0111111123468899999999999887774
Q ss_pred c-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 79 T-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|++||+|+.... ..+.+++...+++|+.++.++.+++... ....++|++||...+....
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 153 (260)
T PRK07063 79 AAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----- 153 (260)
T ss_pred HHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC-----
Confidence 3 379999999997542 2234456678899999999988876531 1246899999975543322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 219 (676)
....|+.+|...+.+++.++.++ |+++..++||.+-.+..... .-........... .+.
T Consensus 154 ---------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~--- 219 (260)
T PRK07063 154 ---------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLAL--QPM--- 219 (260)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhc--CCC---
Confidence 23469999999999999887764 79999999999876532100 0000011111111 111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|++.+++.++.... .++...+.+|.
T Consensus 220 ----~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 220 ----KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred ----CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence 125578999999999886432 46667776654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.3e-16 Score=155.29 Aligned_cols=166 Identities=19% Similarity=0.165 Sum_probs=120.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++||||||+|+||++++++|+++ +++|++++|..... ..+.. .....++.++.+|+.|++.+..++. .++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQV--TALRAEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCE
Confidence 578999999999999999999999 67888888753211 11000 1113358899999999999988873 38999
Q ss_pred EEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 85 IMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 85 Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
|||+|+...... +.++....+++|+.++.++.+.+ ++.+ .++||++||...+.... .
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~--------------~ 141 (257)
T PRK09291 77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGP--------------F 141 (257)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCC--------------C
Confidence 999999764322 22334567788998887776544 3444 57999999964432211 1
Q ss_pred CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccC
Q 005818 157 TNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYG 192 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G 192 (676)
...|+.+|...|.+++.++.. .|++++++|||.+..
T Consensus 142 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 142 TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 346999999999988876654 589999999998743
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-15 Score=154.64 Aligned_cols=224 Identities=12% Similarity=0.038 Sum_probs=144.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... +..... ..++.++++|++|.+++.+++..
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~--~~~~~~--l~~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVA--REALAG--IDGVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHH--hhhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 45689999999999999999999999 67888888864211 110000 12478899999999998877642
Q ss_pred CCCCEEEEccccCCc--CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|+|||+||.... ..+.+.+...+++|+.++..+.+++ ++.+ ..++|++||.......... .......+
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~--~~~~~~~~ 174 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRW--DDPHFTRG 174 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCc--cccCccCC
Confidence 479999999997543 2234456778899999976666544 3433 4699999996543211100 00011123
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
..+...|+.+|...+.+++.+++. .|+++++++||.+.++.....................++ . ..+...+
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~ 248 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI-D-----PGFKTPA 248 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh-h-----hhcCCHh
Confidence 334567999999999999887664 489999999999998854211110000000000000000 0 0245679
Q ss_pred HHHHHHHHHHhcC
Q 005818 231 DVAEAFDTILHKG 243 (676)
Q Consensus 231 D~a~ai~~~~~~~ 243 (676)
|.|.+++.++..+
T Consensus 249 ~~a~~~~~l~~~~ 261 (315)
T PRK06196 249 QGAATQVWAATSP 261 (315)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999888654
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.8e-16 Score=153.21 Aligned_cols=223 Identities=16% Similarity=0.145 Sum_probs=144.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|+++||||||+|+||+.+++.|+++ +++|++..+.......... .......++.++++|+.|++++.+++..
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 3679999999999999999999999 5677655432211100000 0011134688999999999998776632
Q ss_pred CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH-HcC-----CCceEEEEecccc-cCCCCCCcCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK-ITG-----QIKRFIHVSTDEV-YGETDEDAVVG 147 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~-~~~-----~~~~~v~~SS~~v-yg~~~~~~~~~ 147 (676)
.++|+|||+|+.... +...+++...+++|+.++.++++++. ... .-.+||++||... ++....
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----- 153 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE----- 153 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC-----
Confidence 369999999997542 12333455678999999988875433 322 0136999998543 332211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...+.+++.++++. ++++++++||.+..+........ ......... .+. .
T Consensus 154 ---------~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~--~~~-----~-- 214 (248)
T PRK06947 154 ---------YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQ--TPL-----G-- 214 (248)
T ss_pred ---------CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhc--CCC-----C--
Confidence 1359999999999998887764 79999999999988753211111 111111111 111 0
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+..++|++++++.+++.+. .+..+.+.++
T Consensus 215 ~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 215 RAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 24678999999999887643 4555555443
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-16 Score=155.03 Aligned_cols=196 Identities=12% Similarity=0.068 Sum_probs=137.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||+++++.|+++|++| .++.+|++|.+.++++++.. ++|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 34679999999988877753 479
Q ss_pred EEEECccccCCCCc-chhccchhhHHhhhhhh----HHHHHHHH-HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRPNV-DWCETHKPETIRTNVVG----TLTLADVC-RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g----~~~ll~a~-~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||..+.... ....+..+..+++|+.+ +.++++++ +..+. ++|++||...+.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~----------------- 149 (262)
T PRK13394 87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE----------------- 149 (262)
T ss_pred EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------------
Confidence 99999997521111 11234455778899999 66677777 55554 667776643221
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCc---------e---eccCCCcc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK---------V---VNIPNSMT 570 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~---------~---~~~~~~~~ 570 (676)
+..+.+.|+.+|...+.+++.+.+ ..++++.++||+.+++|. ..+........ . .....+|+
T Consensus 150 -~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (262)
T PRK13394 150 -ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFT 228 (262)
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCC
Confidence 112346799999999999887642 357999999999999884 12221111000 0 01124799
Q ss_pred chhhHHHHHHHHHhcCC----CceeEccCCC
Q 005818 571 ILDELLPISVEMAKRNL----SGIWNFTNPG 597 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~~----~g~yn~~~~~ 597 (676)
+++|++++++.++.... +..|++.++.
T Consensus 229 ~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 229 TVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 99999999999987542 3478887763
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-16 Score=153.87 Aligned_cols=222 Identities=14% Similarity=0.113 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+..++++||||+|+||+++++.|+++ +++|++++|..... +.+.. .....++..+++|+.|++.+..++..
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKA--EAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999 67888888864211 11100 11133588899999999988777642
Q ss_pred --CCCCEEEEccccCCcC-------------------CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecc
Q 005818 80 --EKIDTIMHFAAQTHVD-------------------NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTD 134 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~-------------------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~ 134 (676)
.++|+|||+|+..... ...+++...++.|+.++..+++++. +.+ ..+||++||.
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~ 162 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSM 162 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccc
Confidence 3799999999964321 1234566788999999987665543 333 4689999998
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC-----CChHHHHHH
Q 005818 135 EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFIL 206 (676)
Q Consensus 135 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~ 206 (676)
..+.+.. +...|+.+|...+.+++.++.++ |+++.+++||.+..+.... .........
T Consensus 163 ~~~~~~~--------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 228 (278)
T PRK08277 163 NAFTPLT--------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERAN 228 (278)
T ss_pred hhcCCCC--------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHH
Confidence 7764332 23459999999999999887765 7999999999998874310 000111111
Q ss_pred HHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc-CC---CCceEEEcCC
Q 005818 207 LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK-GE---VGHVYNIGTK 254 (676)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~-~~---~~~~y~i~~~ 254 (676)
......+ ...+...+|++++++.++.. .. .++.+.+.+|
T Consensus 229 ~~~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 229 KILAHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred HHhccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 1111111 11366789999999998865 22 4666777655
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-16 Score=158.05 Aligned_cols=210 Identities=11% Similarity=0.042 Sum_probs=146.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++|+||||+|+||++++++|+++|++| ..+++|++|.+++.++++.+ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3579999999999999999999999765 34578999999988877754 679999
Q ss_pred ECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||..... ..+...++....+++|+.++..+++++ ++.+. ++|++||...+.. ..
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~------------------~~ 144 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA------------------FP 144 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC------------------CC
Confidence 999965211 112233456678999999998888876 34443 6778877655521 12
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-----------HHHHHHhcCceeccCCCc-cchhhHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-----------FITKISRYNKVVNIPNSM-TILDELL 576 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-----------~~~~~~~~~~~~~~~~~~-~~v~D~a 576 (676)
..+.|+.+|...+.+++.+.. ..++++..++|+.+..+.. ....+............+ ...+|++
T Consensus 145 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva 224 (275)
T PRK08263 145 MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAA 224 (275)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHH
Confidence 236799999999998877632 4689999999987764321 000010000000011245 7899999
Q ss_pred HHHHHHHhcCC-CceeEc-cCCCcccHHHHHHHHHhh
Q 005818 577 PISVEMAKRNL-SGIWNF-TNPGVVSHNEILEMYKAY 611 (676)
Q Consensus 577 ~~~~~~~~~~~-~g~yn~-~~~~~~s~~e~~~~i~~~ 611 (676)
++++.+++.+. .+.|.. ..+..+++.++.+.+.+-
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 225 EALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW 261 (275)
T ss_pred HHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence 99999998763 344444 445789999999998884
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.9e-16 Score=152.79 Aligned_cols=191 Identities=13% Similarity=0.164 Sum_probs=139.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||.+++++|+++|++| ..+.+|++|.+++.++++.. ++|
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGID 85 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999754 35689999999888877653 579
Q ss_pred EEEECccccCC----CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 435 HVFNAAGVTGR----PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 435 ~Vih~a~~~~~----~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|||+||..+. +..+....+....+++|+.++.++++++... +.++|++||..+|.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------- 150 (250)
T PRK07774 86 YLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------------- 150 (250)
T ss_pred EEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---------------
Confidence 99999996421 1112223445577899999999999998764 34788888876651
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCCCccchhhH
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+.+.|+.||...|.+++.+.+ ..++++..++|+.+..+. .+...+.+..+. .-+..++|+
T Consensus 151 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~ 220 (250)
T PRK07774 151 ------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPL----SRMGTPEDL 220 (250)
T ss_pred ------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCC----CCCcCHHHH
Confidence 236799999999999988743 357999999998887653 122222222211 124578999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCcc
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~ 599 (676)
+++++.++... .+++||+.+++.+
T Consensus 221 a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 221 VGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred HHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 99999988754 2358999987654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.6e-15 Score=149.86 Aligned_cols=207 Identities=15% Similarity=0.065 Sum_probs=142.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+||||||+|+||+++++.|+++ +++|++.+|..... +... ......++.++++|+.|++++.+++.. .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGG--EETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999 67888888754211 1000 011244688899999999998877642 3
Q ss_pred CCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+|+...... +.+++...+++|+.++.++.+++ ++.+ ..+||++||...+.+..
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~----------- 144 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP----------- 144 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC-----------
Confidence 7999999999865322 22344557789988888766654 4444 67999999976654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
....|+.+|...+.+.+.++.+. |+++++++||.+..+...... ..+......... ....+++
T Consensus 145 ---~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 211 (270)
T PRK05650 145 ---AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL----------LEKSPIT 211 (270)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH----------hhcCCCC
Confidence 23469999999888888877763 899999999999877542110 011111111000 0113578
Q ss_pred HHHHHHHHHHHHhcC
Q 005818 229 CEDVAEAFDTILHKG 243 (676)
Q Consensus 229 v~D~a~ai~~~~~~~ 243 (676)
++|+|+.++.++++.
T Consensus 212 ~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 212 AADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999864
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=150.33 Aligned_cols=221 Identities=14% Similarity=0.129 Sum_probs=149.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+|++|||||+|+||+++++.|+++ +++|++.+|...... .+.. .....++.++++|++|++++.++++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLE--EAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999998 678888888642111 1100 01134688999999999998877643
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...++.|+.++.++++++... +...++|++||...+....
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 146 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP---------- 146 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC----------
Confidence 368999999986432 2334456778999999999999888431 2135899999865432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCCCceeecCCCceEee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
....|+.+|...+.+++.++.+ +|+++..++||.+.+....... ......+.+....+ + ..+
T Consensus 147 ----~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~ 213 (252)
T PRK07677 147 ----GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP--L-------GRL 213 (252)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC--C-------CCC
Confidence 1235999999999999876655 4899999999999854321100 01222233322211 1 136
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
...+|+++++..++... -.++.+.+.++
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 244 (252)
T PRK07677 214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGG 244 (252)
T ss_pred CCHHHHHHHHHHHcCccccccCCCEEEECCC
Confidence 67799999998887643 24566667655
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.9e-16 Score=156.44 Aligned_cols=209 Identities=13% Similarity=0.092 Sum_probs=150.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. +
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR 86 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999765 23457999999888887754 6
Q ss_pred CCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 433 PTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 433 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|+|||+||.... +......++....+++|+.++.++++++.+. + .+++++||...+.
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~--------------- 151 (276)
T PRK05875 87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN--------------- 151 (276)
T ss_pred CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC---------------
Confidence 7999999985411 1111223345677899999999999877553 2 3678887765441
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-H-------HHHHHhcCceeccCCCccchhh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-F-------ITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-~-------~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+.+.|+.+|...|.+++.+.+ ..++++..++|+.+.++.. . ....... .....+.+++|
T Consensus 152 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d 224 (276)
T PRK05875 152 ---THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRAC----TPLPRVGEVED 224 (276)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcC----CCCCCCcCHHH
Confidence 112347899999999999988642 3579999999998876521 0 0111100 01124668999
Q ss_pred HHHHHHHHHhcCC----CceeEccCCCcc----cHHHHHHHHHhhcCC
Q 005818 575 LLPISVEMAKRNL----SGIWNFTNPGVV----SHNEILEMYKAYIDP 614 (676)
Q Consensus 575 ~a~~~~~~~~~~~----~g~yn~~~~~~~----s~~e~~~~i~~~~g~ 614 (676)
++++++.++..+. +.+||+.++..+ ++.|+++.+.+..|.
T Consensus 225 va~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 225 VANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 9999999998753 358999998776 888888888766543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=150.37 Aligned_cols=224 Identities=17% Similarity=0.132 Sum_probs=152.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+.++++|||||+|+||.+++++|+++ +++|++.+|.................++..+++|++|++++.+++..
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 34689999999999999999999999 67788887754211100000011134688999999999998887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEeccc-ccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDE-VYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||.... +...+++...+++|+.++..+.+++.. .+ ..+||++||.. .++.
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 153 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGR----------- 153 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCC-----------
Confidence 368999999998653 233445667888999999988877643 23 57899999953 2322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCCh------HHHHHHHHHCCCCceeecCCC
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL------IPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.+...|+.+|...+.+++.++++. |++++.++||.+..+...+... ...+........+
T Consensus 154 ----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 221 (265)
T PRK07097 154 ----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-------- 221 (265)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC--------
Confidence 123569999999999999988774 8999999999998875421100 0011111111111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+...+|++.+++.++... -.++.+.+.++.
T Consensus 222 -~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 222 -AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred -ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 113667899999999998753 245666676653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-15 Score=150.47 Aligned_cols=222 Identities=17% Similarity=0.173 Sum_probs=151.8
Q ss_pred CCCC--CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATV--YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~--~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.++ ++.++||||||+|+||++++++|+++ +++|++.++..... ...++.++.+|++|++++.++++
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~ 69 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDG---------QHENYQFVPTDVSSAEEVNHTVA 69 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccc---------ccCceEEEEccCCCHHHHHHHHH
Confidence 5554 34689999999999999999999999 67888888754211 12367889999999999887764
Q ss_pred c-----CCCCEEEEccccCCc-------------CCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEeccccc
Q 005818 79 T-----EKIDTIMHFAAQTHV-------------DNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVY 137 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~-------------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vy 137 (676)
. .++|+|||+|+.... ..+.+++...+++|+.++..+++++...- +..+||++||...+
T Consensus 70 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (266)
T PRK06171 70 EIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL 149 (266)
T ss_pred HHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence 3 368999999997532 12334556788999999999998886431 13589999997655
Q ss_pred CCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCCh-----------HHH
Q 005818 138 GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL-----------IPK 203 (676)
Q Consensus 138 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~-----------~~~ 203 (676)
.+.. ....|+.+|...+.+++.++.+ +|+++.+++||.+-......... ...
T Consensus 150 ~~~~--------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~ 215 (266)
T PRK06171 150 EGSE--------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQ 215 (266)
T ss_pred CCCC--------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHH
Confidence 3322 1346999999999999887765 48999999999884211110000 011
Q ss_pred HHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 204 FILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+..........++ ..+...+|++.++..++.... .++.+++.+|
T Consensus 216 ~~~~~~~~~~~p~-------~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 216 LRAGYTKTSTIPL-------GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred HHhhhcccccccC-------CCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 1111111001111 135677999999999886432 4566777655
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.3e-16 Score=149.29 Aligned_cols=218 Identities=15% Similarity=0.068 Sum_probs=153.8
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccC-CCCEEEEc
Q 005818 11 LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLTE-KIDTIMHF 88 (676)
Q Consensus 11 lVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d~Vih~ 88 (676)
|||||+|+||+++++.|+++ +++|++.+|..... ..... .....+++++.+|++|++++.+++... ++|++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRL--AAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 69999999999999999999 67888888864211 11000 011346889999999999999988543 58999999
Q ss_pred cccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 89 AAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 89 a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
++..... .+.+++...++.|+.++.++.++....+ ..+||++||...|.... +...|+.+|
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~~--------------~~~~Y~~sK 141 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPSA--------------SGVLQGAIN 141 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCCC--------------cchHHHHHH
Confidence 9875432 2334567888999999999999665543 67999999987765432 245699999
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 165 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 165 ~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
...+.+++.++.+. +++++.++||.+-.+.... ......+........+ . ..+...+|++++++.+++
T Consensus 142 ~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dva~~~~~l~~ 212 (230)
T PRK07041 142 AALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A-------RRVGQPEDVANAILFLAA 212 (230)
T ss_pred HHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhc
Confidence 99999999887764 6889999999886653210 0111112222222111 1 124567999999999997
Q ss_pred cCC-CCceEEEcCCCc
Q 005818 242 KGE-VGHVYNIGTKKE 256 (676)
Q Consensus 242 ~~~-~~~~y~i~~~~~ 256 (676)
... .++.|++.++.+
T Consensus 213 ~~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 213 NGFTTGSTVLVDGGHA 228 (230)
T ss_pred CCCcCCcEEEeCCCee
Confidence 653 477899988754
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=138.43 Aligned_cols=209 Identities=19% Similarity=0.099 Sum_probs=149.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----c-
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----T- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----~- 79 (676)
...|.|+|||||+.||.++++.|.+. |++|++..|+.. .++.+..+.....+..+..|++|.+++..+++ .
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~d--rL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA--GAKVVLAARREE--RLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHH--HHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 34578999999999999999999999 789999998652 22222222222568999999999999766653 2
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||.||....+ ...++|...+++|+.|..++.++.- +.+ ..++|.+||.+..-...+
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~--------- 149 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPG--------- 149 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCC---------
Confidence 3699999999997642 3456788999999999999888764 222 349999999653222221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCCh--HHHHHHHHHCCCCceeecCCCceEee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL--IPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
.+.|+.+|++...+....+++. +++++.+-||.+-..-...-++ -..-......+ ..+
T Consensus 150 -----~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~------------~~~ 212 (246)
T COG4221 150 -----GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG------------GTA 212 (246)
T ss_pred -----CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc------------CCC
Confidence 3459999999999998887764 7999999999885431100000 00111111111 157
Q ss_pred eeHHHHHHHHHHHHhcCC
Q 005818 227 LYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~ 244 (676)
+..+|+|+++.+++++|.
T Consensus 213 l~p~dIA~~V~~~~~~P~ 230 (246)
T COG4221 213 LTPEDIAEAVLFAATQPQ 230 (246)
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 888999999999999876
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=149.43 Aligned_cols=202 Identities=17% Similarity=0.087 Sum_probs=142.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS-RLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|++++||||||+|+||++++++|+++ +++|++++|..... ..+... ....+++++++|+.|.+++..++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKEL--EEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHH--HHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34589999999999999999999998 67888888864211 111000 0115689999999999998877742
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+++..... .+.++....++.|+.++.++++++... ....++|++||...+....
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------- 148 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA----------- 148 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC-----------
Confidence 2799999999876432 233345577899999999998887642 1246899999965543221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+...|+.+|...+.+++.++.+ .|++++++||+.+..+...... ... .. ..+..
T Consensus 149 ---~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----------~~~-------~~--~~~~~ 205 (237)
T PRK07326 149 ---GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----------SEK-------DA--WKIQP 205 (237)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-----------chh-------hh--ccCCH
Confidence 2346999999998888876543 4899999999998765321100 000 00 13678
Q ss_pred HHHHHHHHHHHhcCC
Q 005818 230 EDVAEAFDTILHKGE 244 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~ 244 (676)
+|++++++.++..+.
T Consensus 206 ~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 206 EDIAQLVLDLLKMPP 220 (237)
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999999997654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=148.70 Aligned_cols=220 Identities=16% Similarity=0.104 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcccc-------ccC--CC--CCCCCCCeEEEEecCCCHH
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSN-------LKN--LN--PSRLSPNFKFIKGDVASAD 71 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-------~~~--~~--~~~~~~~v~~v~~Dl~d~~ 71 (676)
+++++||||||+| .||.++++.|+++ +++|++.+|...... ... +. ......+++++++|++|.+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 4568999999995 7999999999999 678888887621110 000 00 0111346899999999999
Q ss_pred HHHHHHcc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCC
Q 005818 72 LVHFILLT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 72 ~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~ 139 (676)
++..+++. .++|+|||+|+..... .+.+++...+++|+.++.++++++... ....+||++||...+.+
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 98776643 3689999999875432 233445677899999999999887542 12368999999766544
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCcee
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 216 (676)
.. ....|+.+|...|.+++.++.+ .+++++.++||.+..+... ...........+
T Consensus 161 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~--- 218 (256)
T PRK12748 161 MP--------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFP--- 218 (256)
T ss_pred CC--------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCC---
Confidence 32 1346999999999998887665 3899999999988765331 111111111111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
. ..+...+|+++++..++... ..++.+++.++
T Consensus 219 -~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 219 -Q-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred -C-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 0 12345699999998888642 24677888665
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=156.07 Aligned_cols=215 Identities=18% Similarity=0.077 Sum_probs=147.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.+.+++|+||||+|+||+++++.|+++ +++|++++|..... +.+.. .....++.++.+|++|++++.++++.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l--~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGL--EALAAEIRAAGGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 456689999999999999999999999 67888888864211 11100 11234688999999999999877642
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHH----HHHcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEA----CKITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.++....+++|+.++.++.++ +++.+ ..+||++||...|.....
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~------ 153 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPL------ 153 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCc------
Confidence 379999999997542 223344567788887777665544 44433 478999999877754321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.+ .++.+++++||.+..+... .. ........ ...
T Consensus 154 --------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~------~~-~~~~~~~~-------~~~ 211 (334)
T PRK07109 154 --------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD------WA-RSRLPVEP-------QPV 211 (334)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh------hh-hhhccccc-------cCC
Confidence 346999999999888776654 2689999999998766321 11 11111110 011
Q ss_pred EeeeeHHHHHHHHHHHHhcCCCCceEEEcC
Q 005818 224 RSYLYCEDVAEAFDTILHKGEVGHVYNIGT 253 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~ 253 (676)
..+...+|+|++++.+++++ ...+.++.
T Consensus 212 ~~~~~pe~vA~~i~~~~~~~--~~~~~vg~ 239 (334)
T PRK07109 212 PPIYQPEVVADAILYAAEHP--RRELWVGG 239 (334)
T ss_pred CCCCCHHHHHHHHHHHHhCC--CcEEEeCc
Confidence 13568899999999999876 34566654
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.2e-16 Score=153.95 Aligned_cols=194 Identities=9% Similarity=0.022 Sum_probs=134.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++|+||||+|+||++++++|+++|++| ..+.+|++|.+++.++++.+ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999754 35678999999988887754 579999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||....+. ......+....+++|+.|+.++++++.. .+ .++|++||...+. +..
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------------------~~~ 145 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------------------TMP 145 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------------------CCC
Confidence 9999752111 1111233456689999999999998643 33 3688888865442 112
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-------------HHHHHHHh--cCceeccCCCccchh
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-------------NFITKISR--YNKVVNIPNSMTILD 573 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-------------~~~~~~~~--~~~~~~~~~~~~~v~ 573 (676)
+.+.|+.+|...|.+++.+. ...++++..++|+.+..+. .+...... .......+..+..++
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (277)
T PRK06180 146 GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPA 225 (277)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHH
Confidence 44779999999999988764 2368999999999986541 01000000 000011223566799
Q ss_pred hHHHHHHHHHhcCCCc-eeEccC
Q 005818 574 ELLPISVEMAKRNLSG-IWNFTN 595 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g-~yn~~~ 595 (676)
|++++++.+++.+... .|.++.
T Consensus 226 dva~~~~~~l~~~~~~~~~~~g~ 248 (277)
T PRK06180 226 KAAQAILAAVESDEPPLHLLLGS 248 (277)
T ss_pred HHHHHHHHHHcCCCCCeeEeccH
Confidence 9999999999887554 444443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=148.38 Aligned_cols=224 Identities=13% Similarity=0.088 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.+++|||||+|+||+++++.|+++ +++|++.+|..... .+.+. ......++..+++|+.|++++.+++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDG-LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67888888754211 00000 011134678899999999998877643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+..... ...+++...++.|+.++..+++++. +.+ ..++|++||...+.....
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~------- 154 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG------- 154 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC-------
Confidence 3689999999986432 2344566788999999988877654 222 468999999654432211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
.+...|+.+|...+.+++.++.+ +|+++.+++||.+.++........ .......... ++ ..+
T Consensus 155 -----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~-~~~~~~~~~~--p~-------~r~ 219 (254)
T PRK06114 155 -----LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMV-HQTKLFEEQT--PM-------QRM 219 (254)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccch-HHHHHHHhcC--CC-------CCC
Confidence 01346999999999998887764 489999999999988754211111 1111222111 11 135
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|++.+++.++.... .|+++.+.+|
T Consensus 220 ~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 220 AKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred cCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 678999999999886432 5667777665
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=150.90 Aligned_cols=208 Identities=20% Similarity=0.125 Sum_probs=141.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc------C
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT------E 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~------~ 80 (676)
+++||||||+|+||+++++.|+++ +++|++.+|..... +.+. ..+++.+.+|+.|.+++..++.. .
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~--~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDV--ARMN----SLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHh--HHHH----hCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999 57888888864211 1111 12578899999999887665522 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHH----HHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVL----LEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+|+..... .+.+++...++.|+.++.++ ++++++.+ ..++|++||...+.+.
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------------ 140 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST------------ 140 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC------------
Confidence 679999999865421 23334557889999998886 55555555 6799999996443221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
.....|+.+|...|.+.+.++. ..++++++++||.+..+.. ..+.. ... ..+....+...+.++++
T Consensus 141 --~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~------~~~~~-~~~--~~~~~~~~~~~~~~~~~ 209 (256)
T PRK08017 141 --PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT------DNVNQ-TQS--DKPVENPGIAARFTLGP 209 (256)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh------hcccc-hhh--ccchhhhHHHhhcCCCH
Confidence 1245699999999998765433 4589999999988754321 01000 000 11111222233467999
Q ss_pred HHHHHHHHHHHhcCCCC
Q 005818 230 EDVAEAFDTILHKGEVG 246 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~~~ 246 (676)
+|+++++..+++++...
T Consensus 210 ~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 210 EAVVPKLRHALESPKPK 226 (256)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 99999999999876543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.6e-16 Score=152.21 Aligned_cols=198 Identities=18% Similarity=0.148 Sum_probs=143.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
++++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.+ ++|+|||
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 86 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFN 86 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999765 46789999999998888754 6799999
Q ss_pred CccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 439 AAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 439 ~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+||.... |..+...++.+..+++|+.++.++++++... +.++|++||..... +..
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~ 148 (257)
T PRK07067 87 NAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------------GEA 148 (257)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------------CCC
Confidence 9996521 1122233556678999999999999998643 24678887753221 113
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHhcC------c---e--eccCCCccchhhH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYN------K---V--VNIPNSMTILDEL 575 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~------~---~--~~~~~~~~~v~D~ 575 (676)
+...|+.||...+.+++.+.. ..++++..++|+.++++.. ....+.... . . ......+.+.+|+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 228 (257)
T PRK07067 149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL 228 (257)
T ss_pred CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHH
Confidence 457799999999999887632 4689999999999998741 110000000 0 0 0112368899999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCccc
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~s 600 (676)
|++++.++... .+.+|++.+++.+|
T Consensus 229 a~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 229 TGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 99999998764 23599998886543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=150.36 Aligned_cols=204 Identities=22% Similarity=0.088 Sum_probs=142.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc------cC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL------TE 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~------~~ 80 (676)
|++||||||+|+||+++++.|+++ +++|++++|.... .+.+.......+++++++|+.|.+++.+++. ..
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAG--LAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 6788888876421 1111111113468999999999999887764 24
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccc-cCCCCCCcCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEV-YGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~ 151 (676)
++|+|||+|+..... .+.++....+++|+.++.++++++.. .+ ..++|++||... ++...
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~---------- 145 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPG---------- 145 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCC----------
Confidence 789999999986532 23345667899999999999888753 22 578999999543 33221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ .++++++++||.+-.+...... .......... ....+.
T Consensus 146 -----~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~-----------~~~~~~ 207 (260)
T PRK08267 146 -----LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTKR-----------LGVRLT 207 (260)
T ss_pred -----chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHhh-----------ccCCCC
Confidence 346999999999999887654 3799999999998765332100 0000000000 011356
Q ss_pred HHHHHHHHHHHHhcC
Q 005818 229 CEDVAEAFDTILHKG 243 (676)
Q Consensus 229 v~D~a~ai~~~~~~~ 243 (676)
.+|++.+++.+++..
T Consensus 208 ~~~va~~~~~~~~~~ 222 (260)
T PRK08267 208 PEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHHhCC
Confidence 699999999999754
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3e-15 Score=148.92 Aligned_cols=223 Identities=19% Similarity=0.108 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|+++++|||||+|+||++++++|+++ +++|++++|...... ...+ .....++.++.+|+.|++++.+++..
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADEL--CGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHH--HHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888888642111 0011 11134678899999999998877643
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccc-cCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEV-YGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~~e 150 (676)
.++|+|||+|+..... .+.++....++.|+.++.++++++... ....+||++||... +...
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 149 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD---------- 149 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC----------
Confidence 3789999999975432 223344567899999999999887532 12468999998543 1111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC------CChHHHHHHHHHCCCCceeecCCC
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP------EKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.....|+.+|...|.+++.++.++ ++++..++||.+.++.... ..........+..+.+.
T Consensus 150 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------- 218 (263)
T PRK08226 150 ----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL------- 218 (263)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC-------
Confidence 113469999999999999887754 7999999999998873210 01111223333322211
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+...+|+++++..++... ..++.+.+.++
T Consensus 219 --~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 219 --RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred --CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 13568899999998887532 24556666655
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=149.60 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++++++|||||+|+||+++++.|+++ +++|++.+|+.... +.+.. ....++.++++|+.|++++.++++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNG--AAVAA-SLGERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH-HhCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 67888888864211 11111 1134688999999999998877643
Q ss_pred CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|++||+|+.... ..+.+++...++.|+.++.++++++... .+-.++|++||...+-+...
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------ 146 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------------ 146 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------------
Confidence 378999999997532 2334456678899999999999876532 12368999999654322221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+++.++.+. |+++.+++||.+..+.... .... ......... ..+ ...+...
T Consensus 147 --~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~~~~~~~~~-~~p-------~~r~~~p 215 (261)
T PRK08265 147 --RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-AKADRVAAP-FHL-------LGRVGDP 215 (261)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-hHHHHhhcc-cCC-------CCCccCH
Confidence 3459999999999998877653 7999999999887653210 0000 000111100 001 1135678
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 230 EDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+|++++++.++.... .++.+.+.++.
T Consensus 216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 216 EEVAQVVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred HHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 999999999986432 56677777663
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.1e-16 Score=151.63 Aligned_cols=195 Identities=11% Similarity=0.056 Sum_probs=139.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.|+|+||||+|+||.+++++|+++|++| .++.+|+.|++++.++++.+ ++|
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 85 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLD 85 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999754 45678999999999888754 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+|+...... ......++...++.|+.++.++++++. +.+ .+++++||...+..
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------------- 148 (251)
T PRK12826 86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------------- 148 (251)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc-----------------
Confidence 9999998652100 022334556779999999999999884 333 36777777654310
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH----HHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI----TKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~----~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..+...|+.+|..+|.+++.+.. ..++++..+||+++++|.. .. ........ ....+++++|++.++
T Consensus 149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~~ 225 (251)
T PRK12826 149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAI---PLGRLGEPEDIAAAV 225 (251)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcC---CCCCCcCHHHHHHHH
Confidence 122346799999999999988643 3589999999999999842 11 11111111 112578999999999
Q ss_pred HHHHhcC----CCceeEccCCCc
Q 005818 580 VEMAKRN----LSGIWNFTNPGV 598 (676)
Q Consensus 580 ~~~~~~~----~~g~yn~~~~~~ 598 (676)
..++... .+++|++.++..
T Consensus 226 ~~l~~~~~~~~~g~~~~~~~g~~ 248 (251)
T PRK12826 226 LFLASDEARYITGQTLPVDGGAT 248 (251)
T ss_pred HHHhCccccCcCCcEEEECCCcc
Confidence 9988654 235888877543
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.9e-16 Score=152.13 Aligned_cols=222 Identities=17% Similarity=0.158 Sum_probs=148.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
.++||||||+|+||+++++.|+++ +++|++++|.................++.++.+|++|++++.++++. .+
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999998 67888888864221100000011123568899999999998877643 36
Q ss_pred CCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 82 ~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|+|||+|+.... +.+.+++...+++|+.++.++++++... .+-.+||++||...+....
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~-------------- 152 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP-------------- 152 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC--------------
Confidence 8999999985432 2233445677889999999999887642 1125999999965542221
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHH--HHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP--KFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
....|+.+|...|.+++.++.+ .++++++++||.+.+..... ...+ ......... .+ ...+...+
T Consensus 153 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~-~~~~~~~~~~~~~~~--~~-------~~~~~~~~ 222 (264)
T PRK07576 153 MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA-RLAPSPELQAAVAQS--VP-------LKRNGTKQ 222 (264)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh-hcccCHHHHHHHHhc--CC-------CCCCCCHH
Confidence 2346999999999999987665 37999999999987532100 0110 111111111 11 12366789
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 231 DVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 231 D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
|++++++.++..+. .+..+.+.++
T Consensus 223 dva~~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 223 DIANAALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred HHHHHHHHHcChhhcCccCCEEEECCC
Confidence 99999999987532 4556666655
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-15 Score=145.69 Aligned_cols=219 Identities=14% Similarity=0.091 Sum_probs=147.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
+++++||||||+|+||+++++.|+++ +++|++..+.... ..+.+.. ..++..+.+|++|.+.+.+++... ++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~-~~~~l~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKD-AAERLAQ---ETGATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHH-HHHHHHH---HhCCeEEecCCCCHHHHHHHHHHhCCCc
Confidence 55789999999999999999999999 6677766553211 1111100 113567889999999888877543 589
Q ss_pred EEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 84 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
++||+|+.... +.+.+++...++.|+.++.+++..+... ....++|++||..... .+..+..
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-------------~~~~~~~ 144 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-------------MPVAGMA 144 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-------------CCCCCCc
Confidence 99999987543 2233456788999999999997555442 2236899999954311 1122355
Q ss_pred hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
.|+.+|...|.+++.++.+ .|+++++++||.+..+...... + ......... ++ ..+...+|++++
T Consensus 145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~-~~~~~~~~~--~~-------~~~~~p~~~a~~ 212 (237)
T PRK12742 145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--P-MKDMMHSFM--AI-------KRHGRPEEVAGM 212 (237)
T ss_pred chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--H-HHHHHHhcC--CC-------CCCCCHHHHHHH
Confidence 7999999999999887765 3799999999999876432111 1 111111111 11 135678999999
Q ss_pred HHHHHhcCC---CCceEEEcCC
Q 005818 236 FDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 236 i~~~~~~~~---~~~~y~i~~~ 254 (676)
+..++.... .+..+.+.++
T Consensus 213 ~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 213 VAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHcCcccCcccCCEEEeCCC
Confidence 999886432 4556666544
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9e-16 Score=153.34 Aligned_cols=194 Identities=11% Similarity=0.015 Sum_probs=135.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++.++||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999765 34568999999998887753 57
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||..... ..+...++....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~---------------- 152 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ---------------- 152 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC----------------
Confidence 9999999965210 11112234456689999999999988753 22 36888888765521
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCc--eeccCCCccchhhHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNK--VVNIPNSMTILDELL 576 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~--~~~~~~~~~~v~D~a 576 (676)
..+.+.|+.+|...|.+++.+.+ ..++++.++||+.+..+. ..+........ .......+++++|+|
T Consensus 153 --~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 230 (274)
T PRK07775 153 --RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLA 230 (274)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHH
Confidence 12346799999999999988743 348999999998775431 11111111000 011123689999999
Q ss_pred HHHHHHHhcCCC-ceeEcc
Q 005818 577 PISVEMAKRNLS-GIWNFT 594 (676)
Q Consensus 577 ~~~~~~~~~~~~-g~yn~~ 594 (676)
++++.+++++.+ .+||+.
T Consensus 231 ~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 231 RAITFVAETPRGAHVVNME 249 (274)
T ss_pred HHHHHHhcCCCCCCeeEEe
Confidence 999999987643 367765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-16 Score=157.02 Aligned_cols=197 Identities=15% Similarity=0.046 Sum_probs=137.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999754 34788999999999888754 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcC-------CcEEEeecCeeeecCCCCCCCCCCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENG-------LLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-------~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
+|||+||...... .....++....+++|+.|+.++++++ .+.+ .++|++||...+..
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 154 (287)
T PRK06194 86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA----------- 154 (287)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-----------
Confidence 9999999762111 11233455667899999999977774 3222 36778787765531
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcCcee-----ccCCCccch
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVV-----NIPNSMTIL 572 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~v 572 (676)
..+.+.|+.+|...|.+++.+.. ..++++..+.|+.+..+ +.....+++.. ....+|+++
T Consensus 155 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~---~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T PRK06194 155 -------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG---IWQSERNRPADLANTAPPTRSQLIA 224 (287)
T ss_pred -------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc---cccccccCchhcccCccccchhhHH
Confidence 12336799999999999987643 34578878888766533 22222222211 122378899
Q ss_pred hhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCC
Q 005818 573 DELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPG 615 (676)
Q Consensus 573 ~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~ 615 (676)
+|++..+.... .++..|+++.+.+.+...
T Consensus 225 ~~~~~~~~~~~--------------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 225 QAMSQKAVGSG--------------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHHHHhhhhcc--------------CCCHHHHHHHHHHHHHcC
Confidence 99887764321 279999999999977543
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=151.17 Aligned_cols=227 Identities=13% Similarity=0.052 Sum_probs=149.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
++++++|||||+|+||+++++.|+++ +++|++++|...... ...+. ....++..+.+|++|++++..++..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIAEAVSETVDKIK--SNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHH--hcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999 688888888621111 11111 1134588999999999988776632
Q ss_pred -CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+|+.... ..+.+.+...++.|+.++..+.+++... .+-.++|++||...+.+..
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 149 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL---------- 149 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------
Confidence 368999999997542 1223345577889999998777765432 1125899999976553322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
....|+.+|...+.+++.++.++ |+++.++.||.|..+..... ..-..+............ + ...+
T Consensus 150 ----~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~ 220 (272)
T PRK08589 150 ----YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT---P--LGRL 220 (272)
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC---C--CCCC
Confidence 13469999999999999887754 79999999999976643100 000000011100000000 0 1135
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|++++++.++.... .++.+.+.++
T Consensus 221 ~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 221 GKPEEVAKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred cCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence 678999999999886432 4566777655
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=149.97 Aligned_cols=220 Identities=17% Similarity=0.150 Sum_probs=146.1
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
..|++++||||||+|+||.++++.|+++ +++|++++|...... ..... ....++++|+.|++++.++++.
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~--~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGK--AAADE---VGGLFVPTDVTDEDAVNALFDTAAE 75 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHH--HHHHH---cCCcEEEeeCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999 678888887542111 00000 0125789999999998887743
Q ss_pred --CCCCEEEEccccCCcC------CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecc-cccCCCCCCcCC
Q 005818 80 --EKIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTD-EVYGETDEDAVV 146 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~-~vyg~~~~~~~~ 146 (676)
.++|+|||+|+..... .+.+.+...++.|+.++.++++.+. +.+ ..++|++||. ++++...
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~----- 149 (255)
T PRK06057 76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT----- 149 (255)
T ss_pred HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC-----
Confidence 3689999999875421 1223456788999999988877654 233 4689999884 4554321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...+.+++.++.+ .|+++++++||.+.++..... .......+... .++.
T Consensus 150 ---------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~----- 212 (255)
T PRK06057 150 ---------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV---HVPM----- 212 (255)
T ss_pred ---------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh---cCCC-----
Confidence 1345999998777776654432 389999999999988754211 00111111110 1111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+..++|+++++..++.... .++.+.+.++
T Consensus 213 --~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 213 --GRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred --CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 147889999999988875422 3566666654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=151.49 Aligned_cols=196 Identities=13% Similarity=0.086 Sum_probs=136.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||+.|+++|+++|++| .++.+|+.|++++.++++.. ++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999999754 45678999999887766543 4799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+|+..+... ......+.+..++.|+.++..+++++ ++.+. ++|++||...+.+
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~------------------ 143 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA------------------ 143 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC------------------
Confidence 999999652111 11122334567889999988888877 44554 5677776544421
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCce------------eccCCCccch
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKV------------VNIPNSMTIL 572 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~------------~~~~~~~~~v 572 (676)
....+.|+.+|...|.+++.+.. ..+++++.+||+.+++|. ..+......... .....+++++
T Consensus 144 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (255)
T TIGR01963 144 SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTV 223 (255)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCH
Confidence 11236799999999999877632 348999999999999884 222211111110 1122378999
Q ss_pred hhHHHHHHHHHhcC----CCceeEccCCCc
Q 005818 573 DELLPISVEMAKRN----LSGIWNFTNPGV 598 (676)
Q Consensus 573 ~D~a~~~~~~~~~~----~~g~yn~~~~~~ 598 (676)
+|+|++++.++... .++.||++++..
T Consensus 224 ~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 224 DEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred HHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 99999999999753 235899987643
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.3e-15 Score=148.73 Aligned_cols=223 Identities=17% Similarity=0.085 Sum_probs=152.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.+++|||||+|+||+++++.|+++ +++|++.+|.... .+.+.. .....++..+.+|++|++++.+++..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDA--LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888875421 111110 11234678899999999998877643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+|+..... .+.+++...++.|+.++..+++++... +.-.++|++||....-...
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 154 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV-------- 154 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--------
Confidence 3799999999976432 233455677899999999999887532 2124799998854321100
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
......|+.+|...+.+++.+++++ |+++.+++||.+-.+... .. ........... +. ..+
T Consensus 155 ----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~--~~-~~~~~~~~~~~--~~-------~r~ 218 (253)
T PRK05867 155 ----PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE--PY-TEYQPLWEPKI--PL-------GRL 218 (253)
T ss_pred ----CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc--cc-hHHHHHHHhcC--CC-------CCC
Confidence 0112469999999999999887654 899999999999776432 11 11112222111 11 136
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...+|++++++.++.... .++.+.+.+|.
T Consensus 219 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 219 GRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred cCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 678999999999986432 56777777663
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=146.47 Aligned_cols=226 Identities=17% Similarity=0.092 Sum_probs=154.5
Q ss_pred CCCCCCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|+..|++|+++||||+ +.||+++++.|+++ |++|++.+|..... +.+. ......+..+++|++|+++++++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~--~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMK--KSLQ-KLVDEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHH--HHHH-hhccCceeEEeCCCCCHHHHHHHHH
Confidence 7788888999999999 79999999999999 68888887752111 1111 1112357889999999999887663
Q ss_pred c-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCc
Q 005818 79 T-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
. .++|++||+||.... +.+.+++...++.|+.++..+.+++... .+-.++|++||........
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~--- 152 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP--- 152 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC---
Confidence 2 369999999997532 2344556778899999999888777542 1125899999854322111
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..........+.+..... .+.
T Consensus 153 -----------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~----- 214 (252)
T PRK06079 153 -----------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSR--TVD----- 214 (252)
T ss_pred -----------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhc--Ccc-----
Confidence 1346999999999999988775 4899999999999776321110011222222221 111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|+++++..++.... .++++.+.++
T Consensus 215 --~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 215 --GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred --cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 136678999999999986432 4566666554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=147.22 Aligned_cols=218 Identities=18% Similarity=0.213 Sum_probs=146.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|++|||||+|+||++++++|+++ +++|+++.|..... .... .......++.++.+|+.|++++.++++. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEER-AEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999 56777776632111 1000 0011234688999999999988777632 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+|+.... ..+.+++...++.|+.++..+++.+ ++.+ ..+||++||.....+..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~----------- 145 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF----------- 145 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC-----------
Confidence 68999999987642 2233455677889999988865554 4444 67999999954332211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...+.+++.++++ .++++++++||.+.++... .+.+.+........++. .+...
T Consensus 146 ---~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~~---------~~~~~ 211 (242)
T TIGR01829 146 ---GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM--AMREDVLNSIVAQIPVG---------RLGRP 211 (242)
T ss_pred ---CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc--ccchHHHHHHHhcCCCC---------CCcCH
Confidence 1345999999888888776654 3899999999999887542 12223333332222211 24556
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
+|+++++..++..+ -.++.+.+.++
T Consensus 212 ~~~a~~~~~l~~~~~~~~~G~~~~~~gg 239 (242)
T TIGR01829 212 EEIAAAVAFLASEEAGYITGATLSINGG 239 (242)
T ss_pred HHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 89999988777543 24677877766
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=150.94 Aligned_cols=199 Identities=18% Similarity=0.031 Sum_probs=140.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||||+||+++++.|+++ +++|++.+|..... +.... ...+++++.+|++|++++.+++..
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~--~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALA--KETAA--ELGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHH--HhccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 67788887754211 11000 011578899999999998766632
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||...... +.++....+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 145 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP---------- 145 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC----------
Confidence 36899999999864321 223455688999999888877664 333 56899999976543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
....|+.+|...+.+.+.++.+ .|+++++++|+.+-.+.... .. ......++.
T Consensus 146 ----~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~--------------~~------~~~~~~~~~ 201 (273)
T PRK07825 146 ----GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG--------------TG------GAKGFKNVE 201 (273)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc--------------cc------cccCCCCCC
Confidence 2346999999888776665544 48999999999885542210 00 001124789
Q ss_pred HHHHHHHHHHHHhcCC
Q 005818 229 CEDVAEAFDTILHKGE 244 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~ 244 (676)
.+|+|++++.+++++.
T Consensus 202 ~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 202 PEDVAAAIVGTVAKPR 217 (273)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.1e-15 Score=147.53 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=123.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
||+||||||+|+||++++++|+++ +++|++++|..... ..+. ..+++++.+|+.|.+.+.++++. .+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~--~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDV--EALA----AAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999998 68898888864211 1111 12477899999999998877643 37
Q ss_pred CCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 82 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|+|||+||..... .+.+++...++.|+.++.++++++... ....++|++||...+....
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 138 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP-------------- 138 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC--------------
Confidence 99999999975432 233455678899999999999887431 1136899999955432211
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCC
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 194 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~ 194 (676)
....|+.+|...+.+.+.++.+ +|+++++++||.+..+.
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 1356999999999988877654 58999999999997653
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=149.53 Aligned_cols=227 Identities=11% Similarity=0.042 Sum_probs=148.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|...|++++||||||+++||+++++.|+++ +++|++..+...... ...+. .....++.++++|++|++++++++
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~ 78 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLE-QKYGIKAKAYPLNILEPETYKELF 78 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHH-HhcCCceEEEEcCCCCHHHHHHHH
Confidence 344567899999999999999999999999 677777655322110 00110 112346889999999999988777
Q ss_pred cc-----CCCCEEEEccccCCc----------CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccC
Q 005818 78 LT-----EKIDTIMHFAAQTHV----------DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYG 138 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg 138 (676)
+. .++|++||+|+.... +...+++...++.|+.+...+.+.+. +.+ ..+||++||...+-
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~ 157 (260)
T PRK08416 79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLV 157 (260)
T ss_pred HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccccc
Confidence 43 368999999986421 11223445677888887776655443 222 36899999964321
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
... ....|+.+|...+.+++.++.++ |+++..+.||.+-.+......-............+
T Consensus 158 ~~~--------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~-- 221 (260)
T PRK08416 158 YIE--------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP-- 221 (260)
T ss_pred CCC--------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC--
Confidence 111 12359999999999999988864 89999999998865532110000112222222111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
. ..+...+|++.+++.++... -.++.+.+.++
T Consensus 222 ~-------~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 222 L-------NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred C-------CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 1 13667899999999988643 24666777655
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-15 Score=146.30 Aligned_cols=196 Identities=16% Similarity=0.142 Sum_probs=141.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--CCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE--KIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--~~d~ 84 (676)
+++|+||||+|+||.+++++|+++ +++|++.+|.... .+.+.. ...++.++.+|++|++++.+++... .+|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSV--LDELHT--QSANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHH--HHHHHH--hcCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 368999999999999999999999 6788888886421 111111 1235889999999999999888542 4789
Q ss_pred EEEccccCCc-C---CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccc-cCCCCCCcCCCCCCCCCCCCCC
Q 005818 85 IMHFAAQTHV-D---NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEV-YGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 85 Vih~a~~~~~-~---~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~~p~~ 158 (676)
+||+|+.... + ...+++...+++|+.++.++++++... .+..++|++||... ++.. ...
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---------------~~~ 139 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP---------------RAE 139 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC---------------CCc
Confidence 9999986432 1 223345578999999999999988753 11357999988532 2211 134
Q ss_pred hhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
.|+.+|...+.+.+.++. .+|+++++++||.++++...... ... + ..+..+|+++.
T Consensus 140 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--------------~~~---~----~~~~~~~~a~~ 198 (240)
T PRK06101 140 AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT--------------FAM---P----MIITVEQASQE 198 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC--------------CCC---C----cccCHHHHHHH
Confidence 699999999999988764 35899999999999987542111 000 0 24678999999
Q ss_pred HHHHHhcCC
Q 005818 236 FDTILHKGE 244 (676)
Q Consensus 236 i~~~~~~~~ 244 (676)
++..++...
T Consensus 199 i~~~i~~~~ 207 (240)
T PRK06101 199 IRAQLARGK 207 (240)
T ss_pred HHHHHhcCC
Confidence 999998653
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=148.68 Aligned_cols=231 Identities=13% Similarity=0.099 Sum_probs=154.1
Q ss_pred CCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATV-YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~-~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|..+ ++++++|||||+|.||+++++.|+++ +++|++.+|...... .+.+. .....++..+.+|++|++++++++
T Consensus 1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (263)
T PRK08339 1 MLKIDLSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIK-SESNVDVSYIVADLTKREDLERTV 77 (263)
T ss_pred CCccCCCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hhcCCceEEEEecCCCHHHHHHHH
Confidence 4443 45789999999999999999999999 678888888642211 00000 111346889999999999988777
Q ss_pred cc----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcC
Q 005818 78 LT----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 78 ~~----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
+. .++|++||+||.... +.+.+++...+++|+.+...+.+++ ++.+ ..++|++||...+.+...
T Consensus 78 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~--- 153 (263)
T PRK08339 78 KELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPN--- 153 (263)
T ss_pred HHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCc---
Confidence 43 369999999997543 2344567788899988777666544 3333 468999999765432221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC---------CChHHHHHHHHHCCCC
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP---------EKLIPKFILLAMKGKP 213 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~---------~~~~~~~~~~~~~~~~ 213 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.+..+.... ........+.... .
T Consensus 154 -----------~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 220 (263)
T PRK08339 154 -----------IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK--P 220 (263)
T ss_pred -----------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc--c
Confidence 2359999999999998887764 7999999999996652100 0000111111111 1
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
++. ..+...+|++.+++.++... -.++.+.+.+|...+
T Consensus 221 ~p~-------~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 221 IPL-------GRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred CCc-------ccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 111 13667899999999988642 256677777665443
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=148.52 Aligned_cols=221 Identities=14% Similarity=0.064 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||+++++.|+++ +++|++++|.... .+.+.. .....++..+.+|+.+++++.+++..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVER--LKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 55789999999999999999999998 6788888886422 111110 11134688999999999998887643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----C-------CCceEEEEecccccCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----G-------QIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-------~~~~~v~~SS~~vyg~~~~ 142 (676)
.++|+|||+|+..... .+.+++...++.|+.++.++++++... . ...++|++||...+....
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~- 161 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP- 161 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC-
Confidence 3689999999975432 123456678899999999999876521 1 025899999976653221
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC
Q 005818 143 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
+..+|+.+|...+.+++.++.+ .++++++++||.|+++....... .......... ++.
T Consensus 162 -------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~--~~~--- 222 (258)
T PRK06949 162 -------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSM--LPR--- 222 (258)
T ss_pred -------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhc--CCC---
Confidence 2456999999999999887765 48999999999999886421111 1111111111 111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGT 253 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~ 253 (676)
..+...+|+++++.+++.... .+....+.+
T Consensus 223 ----~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg 255 (258)
T PRK06949 223 ----KRVGKPEDLDGLLLLLAADESQFINGAIISADD 255 (258)
T ss_pred ----CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence 134556999999999886432 444444443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-15 Score=149.09 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=136.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc--------
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-------- 431 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-------- 431 (676)
++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++..
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 689999999999999999999999754 34678999999988877742
Q ss_pred ---CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 ---KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|+|||+||...... .+.........+++|+.++.++++++.+. ..++|++||..++.
T Consensus 87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-------------- 152 (254)
T PRK12746 87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-------------- 152 (254)
T ss_pred CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC--------------
Confidence 5799999999652111 01112223456789999999999998763 23788888876652
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H-----HHHHHhcCceeccCCCccchhh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F-----ITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~-----~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+.+.|+.+|...|.+++.+.+ ..++++..++|+.+++|.. + +....... .....+++++|
T Consensus 153 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d 225 (254)
T PRK12746 153 ----GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS---SVFGRIGQVED 225 (254)
T ss_pred ----CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc---CCcCCCCCHHH
Confidence 123346799999999999877643 3579999999999987631 1 11111111 11236779999
Q ss_pred HHHHHHHHHhcC----CCceeEccCC
Q 005818 575 LLPISVEMAKRN----LSGIWNFTNP 596 (676)
Q Consensus 575 ~a~~~~~~~~~~----~~g~yn~~~~ 596 (676)
+++++..++..+ .+.+||+.++
T Consensus 226 va~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 226 IADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 999998888654 2358998875
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=150.70 Aligned_cols=195 Identities=10% Similarity=0.026 Sum_probs=139.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999643 46678999999988887755 689
Q ss_pred EEEECccccCCCC---cchhccchhhHHhhhhhhHHHHHHHHHHc-----C-----C-cEEEeecCeeeecCCCCCCCCC
Q 005818 435 HVFNAAGVTGRPN---VDWCETHKPETIRTNVVGTLTLADVCREN-----G-----L-LMMNYATGCIFEYDAKHPEGTG 500 (676)
Q Consensus 435 ~Vih~a~~~~~~~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~-----~-~~v~~sS~~v~~~~~~~~~~~~ 500 (676)
+|||+||...... .....++....+++|+.++.++++++.+. + . ++|++||...+.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---------- 152 (256)
T PRK12745 83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM---------- 152 (256)
T ss_pred EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc----------
Confidence 9999999642100 11123455677999999999999988653 1 2 477777765442
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH---HHHHhcCceeccCCCccch
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI---TKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~---~~~~~~~~~~~~~~~~~~v 572 (676)
+..+.+.|+.+|...|.+++.+.. ..++++..++|+.++++.. +. .+..... ......+.+.
T Consensus 153 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 222 (256)
T PRK12745 153 --------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKG--LVPMPRWGEP 222 (256)
T ss_pred --------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhc--CCCcCCCcCH
Confidence 112346799999999999988743 3689999999999987631 11 1111111 1111257789
Q ss_pred hhHHHHHHHHHhcC---C-CceeEccCCCcc
Q 005818 573 DELLPISVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
+|+++++..++... . +.+|++.++...
T Consensus 223 ~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 223 EDVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred HHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 99999999888654 2 348999887543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-15 Score=149.51 Aligned_cols=196 Identities=14% Similarity=0.098 Sum_probs=139.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||++++++|+++|++| ..+.+|+++++++.++++.. ++|
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 86 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVAD 86 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999865 23558999988888777653 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|||+||...... .+......+..+++|+.++.++++++.+. +.++|++||...+. +.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~ 148 (252)
T PRK06077 87 ILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR------------------PA 148 (252)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC------------------CC
Confidence 9999999642111 01111223467899999999999988754 34688888766552 23
Q ss_pred CCCCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCCChHH-HHHHHHh-----cCceeccCCCccchhhHHHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN-FITKISR-----YNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~-~~~~~~~-----~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
.+.+.|+.+|...|.+++.+.+.. ++++..++|+.+.++.. .+..... ..........+++++|+|++++.+
T Consensus 149 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~ 228 (252)
T PRK06077 149 YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAI 228 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHH
Confidence 455789999999999998864322 68999999999887632 1111100 000112234789999999999999
Q ss_pred HhcC-C-CceeEccCCCc
Q 005818 583 AKRN-L-SGIWNFTNPGV 598 (676)
Q Consensus 583 ~~~~-~-~g~yn~~~~~~ 598 (676)
++.+ . +++||+.++..
T Consensus 229 ~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 229 LKIESITGQVFVLDSGES 246 (252)
T ss_pred hCccccCCCeEEecCCee
Confidence 9755 2 46999998754
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-15 Score=146.12 Aligned_cols=190 Identities=14% Similarity=0.045 Sum_probs=131.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~ 442 (676)
||+++||||+|+||+++++.|+++ ++| .++.+|++|.+++.++++.+ ++|+|||+||.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 468999999999999999999998 765 45679999999999988764 46999999996
Q ss_pred cCCCC-cchhccchhhHHhhhhhh----HHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 443 TGRPN-VDWCETHKPETIRTNVVG----TLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 443 ~~~~~-~~~~~~~~~~~~~~Nv~g----~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
..... .+...++....+.+|+.+ +.++++++++.+.+++++||+..+.. ..+...|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~------------------~~~~~~y~ 143 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRA------------------NPGWGSYA 143 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc------------------CCCCchHH
Confidence 52100 111123344567888888 45555555666678888888765421 12236799
Q ss_pred hhHHHHHHHHHHccC-eEE-EEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC-ceeEcc
Q 005818 518 KTKAMVEELLKEYDN-VCT-LRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS-GIWNFT 594 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~-~~~-l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~-g~yn~~ 594 (676)
.+|...|.+++.+.. ... +++..++|+.+..+.. ..+............+++++|++++++.+++++.. .+||+.
T Consensus 144 ~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 144 ASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ--RGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPPDAHITEVV 221 (227)
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh--hhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence 999999988877532 123 8999999988776531 11111111111234689999999999999987754 356554
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.2e-15 Score=147.70 Aligned_cols=219 Identities=16% Similarity=0.129 Sum_probs=145.7
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC----CCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL----NPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~----~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+||||||+|+||+++++.|+++ +++|++++|..... .+.+ ........+..+++|+.|++++.+++..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAG-LDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchH-HHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999 67888888762111 1111 0111112345688999999998777632
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHH----HHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIY----GTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~----~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+..... ...++....++.|+. ++.++++++++.+ .++||++||...+....+
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~--------- 147 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPD--------- 147 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCC---------
Confidence 3689999999976532 123344567788887 6777777777655 689999999877654432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEeeCCccCCCCCCC--Ch-HHHHHHHHHCCCCceeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPE--KL-IPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~l~~~ilR~~~i~G~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+++.++.+. ++++..++||.+.++..... .. .........++.+ .
T Consensus 148 -----~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~ 213 (251)
T PRK07069 148 -----YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------L 213 (251)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------C
Confidence 2359999999999998876652 48889999999988754210 00 0111111222111 1
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+.+++|++++++.++..+. .++.+.+.++
T Consensus 214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 214 GRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred CCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 135678999999998876432 3455555443
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.2e-15 Score=147.08 Aligned_cols=218 Identities=17% Similarity=0.113 Sum_probs=145.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
+++|||||+|+||.+++++|+++ +.+|++++|...... .+.+ .....++..+.+|++|++++.+++.. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEI--NQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999 678888887532110 0011 11234688999999999998877632 2
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+|+.... +.+.+++...+++|+.++..+++++.. .+...++|++||.....+..
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 145 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------- 145 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-----------
Confidence 68999999987543 223445567889999999877766543 22236899999954432222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHH-----------HHHHHHHCCCCceeec
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP-----------KFILLAMKGKPLPIHG 218 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 218 (676)
....|+.+|...+.+++.++.+. ++++.+++||.+..+... .... ......... +
T Consensus 146 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~---- 214 (254)
T TIGR02415 146 ---ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE--EIDEETSEIAGKPIGEGFEEFSSE--I---- 214 (254)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh--hhhhhhhhcccCchHHHHHHHHhh--C----
Confidence 13469999999999998876664 799999999988665321 1100 000111100 0
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
....+...+|+++++..+++... .++.+.+.++
T Consensus 215 ---~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 215 ---ALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred ---CCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence 01137788999999999997643 3444544443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-15 Score=149.45 Aligned_cols=207 Identities=14% Similarity=0.062 Sum_probs=145.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
++++||||+|+||.+++++|+++|++| ..+.+|+.|.+++.++++.+ ++|+||
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV 82 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 479999999999999999999999644 46689999999998887764 579999
Q ss_pred ECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||....... ....+.....+.+|+.++.++++++.. .+ .+++++||...+. + .
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~--------------~ 143 (257)
T PRK07074 83 ANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-----A--------------L 143 (257)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-----C--------------C
Confidence 99996521111 111122234578999999999988843 33 3567776643221 0 0
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHH-----HHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI-----TKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
....|+.+|...|.+++.+.+ ..++++..++|+.++++.... ..+...........++++++|++++++.++
T Consensus 144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLA 223 (257)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 113699999999999988743 347999999999998774110 001000000111247899999999999999
Q ss_pred hcC---CCc-eeEccCCCcccHHHHHHHHHh
Q 005818 584 KRN---LSG-IWNFTNPGVVSHNEILEMYKA 610 (676)
Q Consensus 584 ~~~---~~g-~yn~~~~~~~s~~e~~~~i~~ 610 (676)
... ..| .+++.++...+..||.+.+.+
T Consensus 224 ~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 224 SPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 643 234 778888889999999998765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.6e-15 Score=145.00 Aligned_cols=228 Identities=15% Similarity=0.091 Sum_probs=147.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...++.++||||||+|+||.+++++|+++ +++|++..|..... ...... .....++.++.+|++|.+++.+++.
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~ 77 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEE-ANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQ 77 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Confidence 445577899999999999999999999999 56777666642111 000000 0113457789999999999877663
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHH----HHHcCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|++||+|+..... .+.+++...++.|+.++..++++ +.+.+.-.++|++||...+.+
T Consensus 78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~------ 151 (261)
T PRK08936 78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP------ 151 (261)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC------
Confidence 2 3689999999975432 22344556789998888765544 344332358999999543321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
..+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+.......-+.......... +.
T Consensus 152 --------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~------ 215 (261)
T PRK08936 152 --------WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI--PM------ 215 (261)
T ss_pred --------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcC--CC------
Confidence 223456999998887777766554 38999999999998875321100111112221111 11
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|++++++.++.... .+..+.+.++
T Consensus 216 -~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 216 -GYIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred -CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 136678999999999886432 3445555544
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-15 Score=148.65 Aligned_cols=195 Identities=11% Similarity=0.034 Sum_probs=138.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||+|+||++++++|+++|++| .++++|++|++++.++++.+ ++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999998754 44678999999988888763 57
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... ........+..+++|+.++.++++++... +.++|++||...+.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------- 148 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA----------------- 148 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC-----------------
Confidence 99999999752111 11123556678999999999999998742 34778887754331
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+..+.+.|+.+|...|.+++.+.. ..++++..++|+.+..+. ..................+.+++|++++++.+
T Consensus 149 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~ 227 (247)
T PRK12935 149 -GGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYL 227 (247)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHH
Confidence 112346799999999988877632 348999999999998763 11111110000011234689999999999998
Q ss_pred HhcC---CCceeEccCC
Q 005818 583 AKRN---LSGIWNFTNP 596 (676)
Q Consensus 583 ~~~~---~~g~yn~~~~ 596 (676)
++.. .+..||+.++
T Consensus 228 ~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 228 CRDGAYITGQQLNINGG 244 (247)
T ss_pred cCcccCccCCEEEeCCC
Confidence 8654 2358998876
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4e-15 Score=147.71 Aligned_cols=194 Identities=14% Similarity=0.108 Sum_probs=134.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++|+||||+|+||++++++|+++|++| ..+.+|++|++++.++++.. .+|+
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 84 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI 84 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999764 35789999999998887753 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+|+...... ......+.+..+++|+.++.++++.+ ++.+. ++|++||...+. +
T Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~------------------~ 146 (258)
T PRK12429 85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV------------------G 146 (258)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc------------------C
Confidence 999999652111 11112334466789999966555554 44454 677777765442 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHHHHHhc--Cc----------eeccCCCccch
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISRY--NK----------VVNIPNSMTIL 572 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~~--~~----------~~~~~~~~~~v 572 (676)
..+.+.|+.+|...+.+++.+. ...++++..++|+.+++|.. .+...... .. .......++++
T Consensus 147 ~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (258)
T PRK12429 147 SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTV 226 (258)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCH
Confidence 2334779999999998887752 34579999999999998752 11111110 00 01122379999
Q ss_pred hhHHHHHHHHHhcC---C-CceeEccCC
Q 005818 573 DELLPISVEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~-~g~yn~~~~ 596 (676)
+|++++++.++... . +..|++.++
T Consensus 227 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 227 EEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 99999999988653 2 347888765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=151.90 Aligned_cols=197 Identities=15% Similarity=0.071 Sum_probs=138.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++++||||+|+||+++++.|+++|++| .++.+|++|++++++ ++.+ ++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~i 82 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRI 82 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCe
Confidence 479999999999999999999999754 345789999988876 5442 57
Q ss_pred CEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||....... ....++....+++|+.++.++++++ ++.+. ++|++||...+.
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~----------------- 145 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV----------------- 145 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC-----------------
Confidence 999999996521111 1122444567889999999998886 44443 567776653331
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHH-------------------HHHHHhcCceecc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNF-------------------ITKISRYNKVVNI 565 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~-------------------~~~~~~~~~~~~~ 565 (676)
+..+.+.|+.+|...|.+++.+. ...+++++++||+.++.+..- +..+.... ...
T Consensus 146 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 222 (280)
T PRK06914 146 -GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI--NSG 222 (280)
T ss_pred -CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH--hhh
Confidence 11234679999999999988764 356899999999988876311 00000000 001
Q ss_pred CCCccchhhHHHHHHHHHhcCCC-ceeEccCCCcccHH
Q 005818 566 PNSMTILDELLPISVEMAKRNLS-GIWNFTNPGVVSHN 602 (676)
Q Consensus 566 ~~~~~~v~D~a~~~~~~~~~~~~-g~yn~~~~~~~s~~ 602 (676)
...+++++|+|++++.+++++.. ..||++++..+++.
T Consensus 223 ~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 223 SDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred hhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 12568999999999999988744 57999887776664
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.4e-15 Score=148.24 Aligned_cols=214 Identities=18% Similarity=0.110 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+.+++||||||+|.||.++++.|.++ +++|++.+|.... .+.+.. ......+..+.+|++|.+++.++++.
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAE--LAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888885421 111100 11123566778999999998877643
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... .+..+||++||...+.+..+
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 152 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG---------- 152 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC----------
Confidence 3689999999986432 233455678899999999999887532 11358999999776644332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+++.++.+ .|+.+.++.||.+..+......--...........+.+. ..++..
T Consensus 153 ----~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~ 221 (296)
T PRK05872 153 ----MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPL-------RRTTSV 221 (296)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcc-------cCCCCH
Confidence 345999999999999877653 489999999999977643211000011111111111111 146788
Q ss_pred HHHHHHHHHHHhcC
Q 005818 230 EDVAEAFDTILHKG 243 (676)
Q Consensus 230 ~D~a~ai~~~~~~~ 243 (676)
+|++++++.+++..
T Consensus 222 ~~va~~i~~~~~~~ 235 (296)
T PRK05872 222 EKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999754
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-15 Score=150.86 Aligned_cols=207 Identities=17% Similarity=0.144 Sum_probs=144.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+..++||||||+|+||+++++.|+++ +++|++.+|.... .+.+.. ......+..+.+|++|++++.++++.
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~--l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEA--LQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888886421 111100 11234678899999999998887642
Q ss_pred --CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||...... +.+++...+++|+.++.++.+++. +.+ ..++|++||...+.....
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~------- 152 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPY------- 152 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCC-------
Confidence 46899999999754322 233455789999999999887753 333 368999999765543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+.+.++.+ .++.++.+.||.+..+....... ..+... .....
T Consensus 153 -------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~~~~~~------~~~~~ 211 (330)
T PRK06139 153 -------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------YTGRRL------TPPPP 211 (330)
T ss_pred -------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------cccccc------cCCCC
Confidence 346999999877777766554 37999999999998875421110 001110 00113
Q ss_pred eeeHHHHHHHHHHHHhcCC
Q 005818 226 YLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~ 244 (676)
+.+.+|+|++++.+++++.
T Consensus 212 ~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 212 VYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 6789999999999998764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-15 Score=147.18 Aligned_cols=196 Identities=18% Similarity=0.127 Sum_probs=140.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++|+||||+|+||++++++|+++|++| ..+.+|++|.++++++++.+ ++|
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 89 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPID 89 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999765 34567999999999888764 479
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.... |......++.+..+.+|+.++.++++++.+. + .++|++||.....
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------------ 151 (255)
T PRK07523 90 ILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL------------------ 151 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc------------------
Confidence 99999996521 1111122334567889999999999988753 3 3677777754321
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-------HHHHHhcCceeccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-------ITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+.+.|+.+|...|.+++.+.. ..++++..++|+.+.++..- +........ ....+..++|+|.+
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~ 228 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRT---PAGRWGKVEELVGA 228 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcC---CCCCCcCHHHHHHH
Confidence 123346799999999999988742 46899999999999887411 111111111 12357789999999
Q ss_pred HHHHHhcCC---Cc-eeEccCCCccc
Q 005818 579 SVEMAKRNL---SG-IWNFTNPGVVS 600 (676)
Q Consensus 579 ~~~~~~~~~---~g-~yn~~~~~~~s 600 (676)
++.++.... .| ++++.++..+|
T Consensus 229 ~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 229 CVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCeecc
Confidence 999987532 34 88888876554
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-15 Score=148.42 Aligned_cols=201 Identities=19% Similarity=0.176 Sum_probs=142.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+||.++++.|+++ +++|++++|..... +.+.. ......+.++++|+.|.+++.++++.
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l--~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLL--DAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44589999999999999999999998 68899988864211 11100 01133578899999999998887742
Q ss_pred --CCCCEEEEccccCCcCCc------CCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHVDNS------FGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~~------~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||....... +++....++.|+.++.++++++. +.+ ..++|++||.+++....
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 186 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEAS------ 186 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC------
Confidence 379999999997643221 12345678999999888887654 334 57999999976654211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
.....|+.+|...+.+++.++.+. ++++++++||.+-.+...+. ... .+ .
T Consensus 187 -------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~----------~~~-------~~---~ 239 (293)
T PRK05866 187 -------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT----------KAY-------DG---L 239 (293)
T ss_pred -------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc----------ccc-------cC---C
Confidence 113469999999999988876653 89999999998866543110 000 00 1
Q ss_pred eeeeHHHHHHHHHHHHhcC
Q 005818 225 SYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~ 243 (676)
..+..+++|+.++.++++.
T Consensus 240 ~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 240 PALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 2467899999999999864
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-15 Score=151.72 Aligned_cols=197 Identities=18% Similarity=0.129 Sum_probs=141.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|.++++++++.. +
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 134 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG 134 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999765 24568999999888887654 6
Q ss_pred CCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 433 PTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 433 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|+|||+||.... +..+...++....+++|+.++.++++++... +.++|++||...|..
T Consensus 135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 198 (300)
T PRK06128 135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP---------------- 198 (300)
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC----------------
Confidence 8999999996421 1112234566788999999999999999753 457888888766521
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH----HHH-HHhcCceeccCCCccchhhHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF----ITK-ISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~----~~~-~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
......|+.||...+.+++.+.+ ..++++..++|+.+.+|... ... +....... ....+...+|++.++
T Consensus 199 --~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~-p~~r~~~p~dva~~~ 275 (300)
T PRK06128 199 --SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET-PMKRPGQPVEMAPLY 275 (300)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCC-CCCCCcCHHHHHHHH
Confidence 12235699999999999988743 35899999999999877310 000 00000011 112466889999999
Q ss_pred HHHHhcCC----CceeEccCCCcc
Q 005818 580 VEMAKRNL----SGIWNFTNPGVV 599 (676)
Q Consensus 580 ~~~~~~~~----~g~yn~~~~~~~ 599 (676)
+.++.... +.+|++.++..+
T Consensus 276 ~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 276 VLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHhCccccCccCcEEeeCCCEeC
Confidence 99886532 348898887654
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-15 Score=144.56 Aligned_cols=200 Identities=15% Similarity=0.092 Sum_probs=142.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||++++++|+++ +.+|++.+|...... ...+.......+++++++|++|++++.++++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999 578888888642211 00111111234688999999999988777642
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||...... ..+.+...++.|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------- 148 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLP---------- 148 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCC----------
Confidence 37999999999765322 223345678899999999888774 333 57899999965432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
.+...|+.+|...+.+++.++.++ ++++++++||++.++.... .+. ...++.
T Consensus 149 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------------~~~----------~~~~~~ 203 (248)
T PRK08251 149 ---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------------AKS----------TPFMVD 203 (248)
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc------------ccc----------CCccCC
Confidence 123569999999999998877653 7899999999997654310 000 012567
Q ss_pred HHHHHHHHHHHHhcCC
Q 005818 229 CEDVAEAFDTILHKGE 244 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~ 244 (676)
.+|.+++++.++++..
T Consensus 204 ~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 204 TETGVKALVKAIEKEP 219 (248)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8999999999997643
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.5e-15 Score=143.45 Aligned_cols=216 Identities=16% Similarity=0.165 Sum_probs=146.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|++++|||||+|+||+++++.|+++ +++|++.+|..... .+.+. ..++.++.+|+.|++++.++++. .
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~-~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPA-IDGLR----QAGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhH-HHHHH----HcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 4579999999999999999999999 67888888864211 11111 12467899999999998777633 2
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CC--CceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQ--IKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~--~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|++||+|+..... .+.+++...+++|+.++..+.+++... .. ..++|++||.....+..
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------- 143 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD---------- 143 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC----------
Confidence 599999999975322 234456678899999998877666542 11 25799999854332111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...|.+++.++.++ ++++.++.||.+.-+... . ...........++. -+...
T Consensus 144 ----~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~---~~~~~~~~~~~~~~---------~~~~~ 206 (236)
T PRK06483 144 ----KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-D---AAYRQKALAKSLLK---------IEPGE 206 (236)
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-C---HHHHHHHhccCccc---------cCCCH
Confidence 13469999999999999988875 589999999987432211 1 11112222221111 13467
Q ss_pred HHHHHHHHHHHhcCC-CCceEEEcCCC
Q 005818 230 EDVAEAFDTILHKGE-VGHVYNIGTKK 255 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~-~~~~y~i~~~~ 255 (676)
+|+++++..++...- .++.+.+.++.
T Consensus 207 ~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 207 EEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 999999999886432 56677776653
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-15 Score=151.76 Aligned_cols=187 Identities=13% Similarity=0.044 Sum_probs=128.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+.......++.++.+|+.|.+++.+++..
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 34689999999999999999999999 678888887542211 01111111134688999999999998877642
Q ss_pred --CCCCEEEEccccCCcC--CcCCChHHHHHHHHHH----HHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYG----THVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.++....+++|+.+ +..+++.+++.+ ..+||++||...+..... ...+....
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~-~~~~~~~~ 169 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAI-HFDDLQWE 169 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCC-CccccCcc
Confidence 3699999999975432 2345566788999999 556666666654 579999999764321111 11111112
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEE--eeCCccCCCC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITT--RGNNVYGPNQ 195 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~il--R~~~i~G~~~ 195 (676)
.+..+...|+.+|+..+.+.+.++++. +++++++ .||.|..+..
T Consensus 170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 233456789999999999999887764 6665544 7999877643
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.3e-15 Score=144.66 Aligned_cols=199 Identities=17% Similarity=0.101 Sum_probs=141.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--CCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--EKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~~ 82 (676)
||+|+||||+|+||.++++.|+++ +++|++++|...... .+.+. .....+++++++|+.|++++.++++. .++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLR-ARGAVAVSTHELDILDTASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence 468999999999999999999999 678888888653211 00000 11234789999999999998887743 257
Q ss_pred CEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 83 DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 83 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
|+|||+++..... ...+++...++.|+.++.++++++... .+..+||++||.....+..
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 143 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA-------------- 143 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC--------------
Confidence 9999999875432 223344567899999999999887542 1257899999964322111
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
....|+.+|...+.+.+.++.+ .|+++.+++||.+.++.... .. .+. ..+...+|+
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~~--~~~-----~~~~~~~~~ 202 (243)
T PRK07102 144 SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------LK--LPG-----PLTAQPEEV 202 (243)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------cC--CCc-----cccCCHHHH
Confidence 1235999999999999887653 48999999999998763210 00 000 135678999
Q ss_pred HHHHHHHHhcC
Q 005818 233 AEAFDTILHKG 243 (676)
Q Consensus 233 a~ai~~~~~~~ 243 (676)
+++++.+++++
T Consensus 203 a~~i~~~~~~~ 213 (243)
T PRK07102 203 AKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHhCC
Confidence 99999999865
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.4e-15 Score=147.44 Aligned_cols=194 Identities=15% Similarity=0.120 Sum_probs=132.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence 4689999999999999999999999754 34668999988888777653 5799
Q ss_pred EEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||... .|.......+....+++|+.++..+++++. +.+ .++|++||...++
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------ 149 (260)
T PRK12823 88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG------------------ 149 (260)
T ss_pred EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC------------------
Confidence 999998431 111222334455678899998886655543 444 4788888865441
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHH----hcCc-----------eeccCCCcc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKIS----RYNK-----------VVNIPNSMT 570 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~----~~~~-----------~~~~~~~~~ 570 (676)
.+...|+.||...|.+++.+.. ..++++..++|+.+++|........ .... .-....-+.
T Consensus 150 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T PRK12823 150 --INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYG 227 (260)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCC
Confidence 0124699999999999988743 3589999999999998731111000 0000 000011345
Q ss_pred chhhHHHHHHHHHhcC---CC-ceeEccCCC
Q 005818 571 ILDELLPISVEMAKRN---LS-GIWNFTNPG 597 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~~-g~yn~~~~~ 597 (676)
+++|++++++.++... .. .+|++.+++
T Consensus 228 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 228 TIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred CHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 7899999999988653 23 478887654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6e-15 Score=146.66 Aligned_cols=222 Identities=17% Similarity=0.110 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... +.+.. ....++.++++|+.|++++.+++..
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKL--ASLRQ-RFGDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH-HhCCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 67888888864211 11111 1134578899999999988777643
Q ss_pred CCCCEEEEccccCCc-----CCcCCC----hHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGN----SFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~----~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.++ +...++.|+.++..+++++... .+-.++|++||...+.+..+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------ 152 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG------ 152 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC------
Confidence 379999999997532 112222 4566789999999988877632 11257999999776543322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCC---------hHHHHHHHHHCCCCceee
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEK---------LIPKFILLAMKGKPLPIH 217 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~---------~~~~~~~~~~~~~~~~~~ 217 (676)
...|+.+|...+.+++.++.+. ++++..+.||.+..+...... ..+......... .++
T Consensus 153 --------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~- 221 (263)
T PRK06200 153 --------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--TPL- 221 (263)
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--CCC-
Confidence 2359999999999999888764 589999999999765321100 011111111111 111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC-C---CCceEEEcCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG-E---VGHVYNIGTK 254 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~-~---~~~~y~i~~~ 254 (676)
..+...+|++++++.++... . .++.+.+.+|
T Consensus 222 ------~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 222 ------QFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred ------CCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 13667899999999988644 2 4666777655
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.8e-15 Score=147.14 Aligned_cols=166 Identities=13% Similarity=0.074 Sum_probs=122.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-------
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT------- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~------- 79 (676)
||+||||||+|+||++++++|+++ +++|++++|+..... ......++.++++|+.|.+++.+++..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 358999999999999999999998 678888887643211 111234688999999999998875432
Q ss_pred --CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+|+..... .+.+++...++.|+.++..+.+.+... ....++|++||...+.+..
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 145 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA-------- 145 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC--------
Confidence 2689999999975431 123445677889999977766655432 1246999999976654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH--cCCCEEEEeeCCccCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGP 193 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~l~~~ilR~~~i~G~ 193 (676)
+...|+.+|...|.+++.++.+ .++++.+++||.+-.+
T Consensus 146 ------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 ------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred ------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 2456999999999999988764 4899999999988554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.6e-15 Score=139.19 Aligned_cols=191 Identities=17% Similarity=0.173 Sum_probs=140.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d~Vi 86 (676)
|+||||||+|+||.++++.|.++ ++|++.+|... .+++|++|+++++++++.. ++|+||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999987 67888887421 3689999999999888544 799999
Q ss_pred EccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 87 HFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 87 h~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
|+||..... .+.+++...+++|+.++.++.+++... .+..+|+++||.....+.. ....|+
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~--------------~~~~Y~ 126 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP--------------GGASAA 126 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC--------------CchHHH
Confidence 999975432 234456678899999999999887642 1135799999854322111 234699
Q ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~--~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
.+|...+.+++.++.+ .|+++..+.||.+-.+.. .. +..++ + ..++..+|+|++++.+
T Consensus 127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-------~~------~~~~~--~-----~~~~~~~~~a~~~~~~ 186 (199)
T PRK07578 127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-------KY------GPFFP--G-----FEPVPAARVALAYVRS 186 (199)
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-------hh------hhcCC--C-----CCCCCHHHHHHHHHHH
Confidence 9999999999887775 489999999998744321 00 00011 1 1367889999999999
Q ss_pred HhcCCCCceEEEc
Q 005818 240 LHKGEVGHVYNIG 252 (676)
Q Consensus 240 ~~~~~~~~~y~i~ 252 (676)
++....+++|+++
T Consensus 187 ~~~~~~g~~~~~~ 199 (199)
T PRK07578 187 VEGAQTGEVYKVG 199 (199)
T ss_pred hccceeeEEeccC
Confidence 9876677777653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-15 Score=157.96 Aligned_cols=204 Identities=14% Similarity=0.044 Sum_probs=143.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------------eeccccCCChHHHHHHhh
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------------EYGKGRLENRSQLLADIQ 429 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------------~~~~~Dl~d~~~~~~~~~ 429 (676)
..++|+||||+|+||++++++|+++|++| .++.+|+.|.+++.+++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 34689999999999999999999999765 246789999999999898
Q ss_pred ccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 430 NVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 430 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
++ |+|||++|.. .. ...+....+++|+.|+.+++++|++.++ ++|++||..++... .+ . .
T Consensus 159 gi--DiVVn~AG~~---~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g--~p--------~-~- 219 (576)
T PLN03209 159 NA--SVVICCIGAS---EK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG--FP--------A-A- 219 (576)
T ss_pred CC--CEEEEccccc---cc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC--cc--------c-c-
Confidence 87 9999999854 11 1123456688999999999999999886 67777776542110 00 0 0
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee----ccCCCccchhhHHHHHHHHHh
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV----NIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~ 584 (676)
.......|...|..+|+.+.. .+++++++|++.++++..... ..+.... .....++..+|+|++++.++.
T Consensus 220 ~~~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~--~t~~v~~~~~d~~~gr~isreDVA~vVvfLas 293 (576)
T PLN03209 220 ILNLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--ETHNLTLSEEDTLFGGQVSNLQVAELMACMAK 293 (576)
T ss_pred chhhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccc--cccceeeccccccCCCccCHHHHHHHHHHHHc
Confidence 112345688899999998863 589999999999987631100 0011011 111245788999999999988
Q ss_pred cCC---CceeEccCCCcccHHHHHHHHHhh
Q 005818 585 RNL---SGIWNFTNPGVVSHNEILEMYKAY 611 (676)
Q Consensus 585 ~~~---~g~yn~~~~~~~s~~e~~~~i~~~ 611 (676)
.+. ..+|.+.++.......+.+++..+
T Consensus 294 d~~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 294 NRRLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred CchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 653 358999987655445555555543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.8e-15 Score=149.09 Aligned_cols=220 Identities=16% Similarity=0.129 Sum_probs=147.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.++++++|||||+|+||+++++.|+++ +.+|++.++...... +.... .....++.++.+|+.|.+.+.++++.
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~-~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDA-SDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHH-HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 678888776432110 00000 11234688999999999998877643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc--------C--CCceEEEEecccccCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT--------G--QIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~--~~~~~v~~SS~~vyg~~~~~ 143 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... + .-.++|++||...+.+..+
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 164 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG- 164 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC-
Confidence 3799999999986532 334456678999999999999876421 0 0148999999665433221
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
...|+.+|...+.+++.++.+ +|+++.++.|+. ..+ +...+.. .... ..
T Consensus 165 -------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~------~~~~~~~----~~~~-~~--- 216 (306)
T PRK07792 165 -------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA------MTADVFG----DAPD-VE--- 216 (306)
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc------hhhhhcc----ccch-hh---
Confidence 235999999999999887764 589999998873 111 1111100 0000 00
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.....++..+|++.++..++... ..+++|.+.++.
T Consensus 217 ~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 217 AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM 254 (306)
T ss_pred hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence 01123457899999998887542 356778776653
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7e-15 Score=145.87 Aligned_cols=184 Identities=14% Similarity=0.050 Sum_probs=133.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.|+|+||||+|+||++++++|+++|++| ..+.+|++|++++.++++.+ ++|
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d 84 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD 84 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence 3689999999999999999999999755 45788999999988887764 689
Q ss_pred EEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||..+. +......++....+++|+.++..+++++... +.++|++||...+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~------------------ 146 (258)
T PRK07890 85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH------------------ 146 (258)
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc------------------
Confidence 99999986421 1112234556678999999999999998753 23678887764431
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCc-----------eeccCCCccch
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK-----------VVNIPNSMTIL 572 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~-----------~~~~~~~~~~v 572 (676)
+..+...|+.+|...|.+++.+.. ..++++..++|+.+++|. .++........ .......+..+
T Consensus 147 ~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (258)
T PRK07890 147 SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTD 226 (258)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCH
Confidence 123346799999999999988743 358999999999999984 22221111100 00011256789
Q ss_pred hhHHHHHHHHHhc
Q 005818 573 DELLPISVEMAKR 585 (676)
Q Consensus 573 ~D~a~~~~~~~~~ 585 (676)
+|++++++.++..
T Consensus 227 ~dva~a~~~l~~~ 239 (258)
T PRK07890 227 DEVASAVLFLASD 239 (258)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999998874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.3e-15 Score=145.98 Aligned_cols=197 Identities=12% Similarity=0.031 Sum_probs=135.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999764 24568999999998888764 58
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----CC-cEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----GL-LMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... |..+....+....+.+|+.++.++++++... +. ++|++||...+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------- 146 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR----------------- 146 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc-----------------
Confidence 999999986421 1111112233456789999999999988753 23 667777654331
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH--HHHHhcCceeccCCCccchhhHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI--TKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~--~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
+..+...|+.+|.+.|.+++.+.. ..++++..++|+.+..+.. +. ..+............++..+|++++++
T Consensus 147 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 225 (250)
T PRK08063 147 -YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVL 225 (250)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 123346799999999999988642 3689999999999876531 00 000000000011235788999999999
Q ss_pred HHHhcCC----CceeEccCCCc
Q 005818 581 EMAKRNL----SGIWNFTNPGV 598 (676)
Q Consensus 581 ~~~~~~~----~g~yn~~~~~~ 598 (676)
.++..+. +..+++.++..
T Consensus 226 ~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 226 FLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred HHcCchhcCccCCEEEECCCee
Confidence 9987542 34777777644
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.7e-15 Score=146.38 Aligned_cols=196 Identities=12% Similarity=0.063 Sum_probs=134.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+|+++||||+|+||++++++|+++|++| .++.+|++|.+++.++++.+ ++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 88 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPI 88 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999644 34678999999988887654 47
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHcC-----CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRENG-----LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-----~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... +......++.+..+++|+.++.++++++.... .++++++|...+.
T Consensus 89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~----------------- 151 (258)
T PRK09134 89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN----------------- 151 (258)
T ss_pred CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----------------
Confidence 999999996421 11122334556789999999999999887632 2455555543221
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCCChHH----HHHHHHhcCceeccCCCccchhhHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
+.+....|+.+|...|.+.+.+.+.+ .+++..++|+.+..... ......... . ......++|+|++++.
T Consensus 152 -~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~---~-~~~~~~~~d~a~~~~~ 226 (258)
T PRK09134 152 -LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAAT---P-LGRGSTPEEIAAAVRY 226 (258)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcC---C-CCCCcCHHHHHHHHHH
Confidence 11223579999999999998864322 38999999988764321 111111111 1 1235679999999999
Q ss_pred HHhcC-CCc-eeEccCCCcccH
Q 005818 582 MAKRN-LSG-IWNFTNPGVVSH 601 (676)
Q Consensus 582 ~~~~~-~~g-~yn~~~~~~~s~ 601 (676)
+++.+ .+| .|++.++..+++
T Consensus 227 ~~~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 227 LLDAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred HhcCCCcCCCEEEECCCeeccc
Confidence 99876 334 778777654443
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=160.32 Aligned_cols=233 Identities=16% Similarity=0.145 Sum_probs=150.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||++++++|+++ +++|++.+|....... ..+........+..+++|++|++++.++++.
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888886422110 0111001123577899999999999888743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...++.|+.+...+.+.+. ..+...+||++||...+.+..
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~-------- 561 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK-------- 561 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC--------
Confidence 2799999999975432 1233456778889988877764443 322125899999954432221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCcc-CCCCCCCChHHHHHHHHHCCCCc----eeecCCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVY-GPNQFPEKLIPKFILLAMKGKPL----PIHGDGS 221 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~-G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 221 (676)
....|+.+|...+.+++.++.+. |+++..++|+.|+ |.+......... +....+... .......
T Consensus 562 ------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~ 633 (676)
T TIGR02632 562 ------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREE--RAAAYGIPADELEEHYAKRT 633 (676)
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhh--hhhcccCChHHHHHHHHhcC
Confidence 13569999999999999887763 7999999999887 433211111000 000000000 0000111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
....+++.+|+++++..++... ..+.++++.+|.
T Consensus 634 ~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 634 LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 1235788999999999887642 246788888764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=141.62 Aligned_cols=224 Identities=16% Similarity=0.119 Sum_probs=150.9
Q ss_pred CCCCCeEEEEcCCc-hhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAG-FIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG-~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
+++++++|||||+| .||+++++.|+++ +++|++.+|...... .+.+.......++..+++|+.+++++.++++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 45678999999998 6999999999999 677888877542110 00011001123688899999999998877743
Q ss_pred ----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+.... +.+.+++...++.|+.++..+++++.. .+.-.++|++||...+-..
T Consensus 92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------- 164 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ------- 164 (262)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-------
Confidence 378999999997532 223345667888999999998887653 1113578888885433221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
.+...|+.+|...+.+++.++.+ +|+++.+++||.+..+..... .............++ .
T Consensus 165 -------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~---------~ 227 (262)
T PRK07831 165 -------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAF---------G 227 (262)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCC---------C
Confidence 12346999999999999988876 489999999999988753211 112222233222211 1
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcC
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGT 253 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~ 253 (676)
.+...+|++++++.++.... .|+.+.+.+
T Consensus 228 r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 228 RAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred CCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 35667999999999886532 455665554
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=144.82 Aligned_cols=197 Identities=14% Similarity=0.104 Sum_probs=135.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|++.+.++++.+ ++|+|
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 90 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVL 90 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3689999999999999999999999865 34678999999888877653 67999
Q ss_pred EECccccCCC--CcchhccchhhHHhhhhhhHHHHHHHHHH----cCC-cEE-EeecCeeeecCCCCCCCCCCCccccCC
Q 005818 437 FNAAGVTGRP--NVDWCETHKPETIRTNVVGTLTLADVCRE----NGL-LMM-NYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 437 ih~a~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~-~~v-~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
||+||....+ ......++....+++|+.++.++++++.. .+. ++| ++||.....
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~------------------ 152 (264)
T PRK12829 91 VNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL------------------ 152 (264)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc------------------
Confidence 9999964110 11223345568899999999999998743 333 444 444432211
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHh--cCc-------ee--ccCCCccch
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR--YNK-------VV--NIPNSMTIL 572 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~--~~~-------~~--~~~~~~~~v 572 (676)
+..+...|+.+|...|.+++.+.. ..+++++.+||+.+++|.. ++..... +.. .. .....++++
T Consensus 153 ~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (264)
T PRK12829 153 GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEP 232 (264)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCH
Confidence 112235699999999999988643 3589999999999999852 2111000 000 00 011258999
Q ss_pred hhHHHHHHHHHhcC----CCceeEccCCCc
Q 005818 573 DELLPISVEMAKRN----LSGIWNFTNPGV 598 (676)
Q Consensus 573 ~D~a~~~~~~~~~~----~~g~yn~~~~~~ 598 (676)
+|++.++..++... .+..|++.++..
T Consensus 233 ~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 233 EDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 99999998887642 234888888654
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=143.63 Aligned_cols=191 Identities=13% Similarity=0.112 Sum_probs=133.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+.++||||+|+||.+++++|+++|+.| .++.+|++|.+++.++++.. ++|
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 469999999999999999999999643 35678999999988888754 579
Q ss_pred EEEECccccCCC--CcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 435 HVFNAAGVTGRP--NVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 435 ~Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|||+|+..... ..+...++....+++|+.++.++++++.+. ..+++++||...+...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------ 150 (248)
T PRK06123 83 ALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS------------ 150 (248)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC------------
Confidence 999999965211 011122344577999999999999888653 1257888887544211
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+ .....|+.+|...|.+++.+. ...++++..+||+.+++|.. ++.... ....+ .-+.+++|
T Consensus 151 ----~-~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~-~~~p~---~~~~~~~d 221 (248)
T PRK06123 151 ----P-GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVK-AGIPM---GRGGTAEE 221 (248)
T ss_pred ----C-CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHH-hcCCC---CCCcCHHH
Confidence 0 111359999999999988764 34589999999999998841 111111 11111 12347899
Q ss_pred HHHHHHHHHhcC---CC-ceeEccCC
Q 005818 575 LLPISVEMAKRN---LS-GIWNFTNP 596 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~-g~yn~~~~ 596 (676)
++++++.++... .. .+|++.++
T Consensus 222 ~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 222 VARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHHHhCccccCccCCEEeecCC
Confidence 999999988753 23 48888764
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.8e-15 Score=144.74 Aligned_cols=195 Identities=13% Similarity=0.118 Sum_probs=133.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+||
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 89 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALV 89 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999754 35678999998887665543 579999
Q ss_pred ECccccCC---CCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 438 NAAGVTGR---PNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 438 h~a~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
|+||.... +..+...++....+++|+.++.++++++.. .+.++|++||...+.. .
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~------------------~ 151 (255)
T PRK05717 90 CNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS------------------E 151 (255)
T ss_pred ECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC------------------C
Confidence 99996521 001122345567899999999999999964 2356788887654421 1
Q ss_pred CCCCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCCChHHH---HHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRNF---ITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
...+.|+.+|...|.+++.+.+.+ ++++..++|+.+.++..- ................+.+.+|++.++..++..
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 231 (255)
T PRK05717 152 PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSR 231 (255)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 123579999999999998864332 489999999999875310 000110000011123567889999999888864
Q ss_pred C---CCc-eeEccCC
Q 005818 586 N---LSG-IWNFTNP 596 (676)
Q Consensus 586 ~---~~g-~yn~~~~ 596 (676)
. ..| ++.+.++
T Consensus 232 ~~~~~~g~~~~~~gg 246 (255)
T PRK05717 232 QAGFVTGQEFVVDGG 246 (255)
T ss_pred hhcCccCcEEEECCC
Confidence 3 223 5555443
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=141.08 Aligned_cols=200 Identities=20% Similarity=0.219 Sum_probs=137.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLVHFILL---- 78 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~---- 78 (676)
..++||||||+|+||++++++|+++| +++|++.+|+..... .+.+.. ....+++++++|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPRRDAAVAQMKA-AGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchhHHHHHHHHHh-cCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 46799999999999999999999985 478888888653200 011111 112368999999999988665543
Q ss_pred cCCCCEEEEccccCCcC-CcCCCh---HHHHHHHHHHHHH----HHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHVD-NSFGNS---FEFTKNNIYGTHV----LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~-~~~~~~---~~~~~~nv~~~~~----ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
..++|++||++|..... ....+. .+.+++|+.++.+ ++.++++.+ ..+||++||...+.+.
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~---------- 153 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR---------- 153 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC----------
Confidence 23799999999876431 112222 2468999988876 556666655 6799999996543221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
.+...|+.+|.....+.+.++. .+++++++++||.+..+.... .... ...+
T Consensus 154 ----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~-------------~~~~---------~~~~ 207 (253)
T PRK07904 154 ----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH-------------AKEA---------PLTV 207 (253)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc-------------CCCC---------CCCC
Confidence 1234599999999877666543 358999999999998653210 0000 0246
Q ss_pred eHHHHHHHHHHHHhcCC
Q 005818 228 YCEDVAEAFDTILHKGE 244 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~ 244 (676)
..+|+|+.++.+++++.
T Consensus 208 ~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 208 DKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 78999999999998654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=143.38 Aligned_cols=208 Identities=15% Similarity=0.179 Sum_probs=137.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC------
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE------ 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~------ 80 (676)
||+||||||+|+||+++++.|+++ +++|++++|..... ...+. .....+++++++|++|++++++++...
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKE-LTKLA-EQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHH-HHHHH-hccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 368999999999999999999999 67888888864211 11111 112346889999999999988776321
Q ss_pred ---CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 81 ---KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 81 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
+..++||+||.... ..+.+++...+++|+.+...+++.+. +.+...+||++||...+..
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 147 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--------- 147 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC---------
Confidence 12278999987543 23344556777889888776665543 3222358999999655322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCC-----CChHHHHHHHHHCCCCceeec
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 218 (676)
..+...|+.+|...+.+++.++.+ .++++..++||.+-.+.... ...... .+...... .
T Consensus 148 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~-----~ 216 (251)
T PRK06924 148 -----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-LDRFITLK-----E 216 (251)
T ss_pred -----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchH-HHHHHHHh-----h
Confidence 223457999999999999887755 36889999999886543210 000000 11111000 0
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhc
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
.+ .+...+|++++++.+++.
T Consensus 217 ~~----~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 217 EG----KLLSPEYVAKALRNLLET 236 (251)
T ss_pred cC----CcCCHHHHHHHHHHHHhc
Confidence 01 257889999999999875
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=144.02 Aligned_cols=223 Identities=16% Similarity=0.088 Sum_probs=147.0
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc-------ccccCCCC--CCCCCCeEEEEecCCCHHHHH
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-------SNLKNLNP--SRLSPNFKFIKGDVASADLVH 74 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-------~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~ 74 (676)
.++.+++|||||++.||+++++.|+++ +++|++.++.... ........ .....++..+.+|++|++++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence 466789999999999999999999999 5777777654200 00000000 011345788999999999887
Q ss_pred HHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cC-----CCceEEEEecccc
Q 005818 75 FILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TG-----QIKRFIHVSTDEV 136 (676)
Q Consensus 75 ~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-----~~~~~v~~SS~~v 136 (676)
++++. .++|++||+||.... +.+.+++...+++|+.++..+.+++.. .. .-.+||++||...
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 160 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG 160 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence 76632 378999999997542 234456678899999999998877642 11 0148999999654
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCC
Q 005818 137 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKP 213 (676)
Q Consensus 137 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 213 (676)
+.+..+ ...|+.+|...+.+++.++.+ +|+++..+.|| +..+. ............+
T Consensus 161 ~~~~~~--------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~------~~~~~~~~~~~~~ 219 (286)
T PRK07791 161 LQGSVG--------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM------TETVFAEMMAKPE 219 (286)
T ss_pred CcCCCC--------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc------chhhHHHHHhcCc
Confidence 332221 345999999999998887665 48999999998 42221 1111111111110
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.....+...+|++.+++.++... -.++.+.+.++..
T Consensus 220 -------~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~ 258 (286)
T PRK07791 220 -------EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI 258 (286)
T ss_pred -------ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence 01112457899999999988642 2566777766653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=139.28 Aligned_cols=215 Identities=18% Similarity=0.116 Sum_probs=143.7
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc-----CCCC
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT-----EKID 83 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~~d 83 (676)
||||||+|+||.++++.|+++ +++|+++++........... ......++.++.+|+.|.+++.+++.. .++|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999 67787777643211100000 011234689999999999998777632 3689
Q ss_pred EEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH-----HcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK-----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 84 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++||+|+.... ..+.+++...++.|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~------------- 144 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNR------------- 144 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCC-------------
Confidence 99999997543 22445667889999999999988762 122 46899999954432221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
....|+.+|...+.+.+.++.+ .|++++.++||.+.++... ..... ....... .++ ..+...+|
T Consensus 145 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~-~~~~~~~--~~~-------~~~~~~~~ 211 (239)
T TIGR01831 145 -GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA--EVEHD-LDEALKT--VPM-------NRMGQPAE 211 (239)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch--hhhHH-HHHHHhc--CCC-------CCCCCHHH
Confidence 1245999999988888776654 3899999999999877542 11111 1122211 111 12456799
Q ss_pred HHHHHHHHHhcCC---CCceEEEcC
Q 005818 232 VAEAFDTILHKGE---VGHVYNIGT 253 (676)
Q Consensus 232 ~a~ai~~~~~~~~---~~~~y~i~~ 253 (676)
++++++.++..+. .+....+.+
T Consensus 212 va~~~~~l~~~~~~~~~g~~~~~~g 236 (239)
T TIGR01831 212 VASLAGFLMSDGASYVTRQVISVNG 236 (239)
T ss_pred HHHHHHHHcCchhcCccCCEEEecC
Confidence 9999999987532 344444443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-14 Score=140.13 Aligned_cols=227 Identities=12% Similarity=0.034 Sum_probs=148.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.++.+++|||||+|+||+++++.|+++ +++|++.+|...... .+.+.......++..+.+|++|.+++.++++.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 355789999999999999999999999 678888888642111 01111111123678899999999998777632
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...++.|+.+...+.+++. +.+ ..++|++||...+.+...
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~------ 155 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPH------ 155 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCC------
Confidence 3689999999975421 2333566778889888777776553 332 468999999765433221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC--------CChHHHHHHHHHCCCCceee
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMKGKPLPIH 217 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~ 217 (676)
...|+.+|...+.+++.++.+ .|+++..++||.+..+.... ................++.
T Consensus 156 --------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 226 (265)
T PRK07062 156 --------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL- 226 (265)
T ss_pred --------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc-
Confidence 245999999988888776654 48999999999997653210 0001111111111111111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+...+|++.+++.++... -.++++.+.+|
T Consensus 227 ------~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 227 ------GRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred ------CCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 13567799999999988642 25667777665
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=143.30 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=138.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||+++++.|+++|++| .++.+|++|.+++.++++.+ ++|
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 85 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVD 85 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999999999999754 34678999999998887764 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----Hc--CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----EN--GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||...... .....++....+++|+.++.++++++. +. +.++|++||...+.
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~----------------- 148 (275)
T PRK05876 86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV----------------- 148 (275)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc-----------------
Confidence 9999999652111 112233445678999999999999875 23 34688888875542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHH-HHHHH-----hcCce-----eccCCCccchh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNF-ITKIS-----RYNKV-----VNIPNSMTILD 573 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~-~~~~~-----~~~~~-----~~~~~~~~~v~ 573 (676)
+..+.+.|+.||...+.+.+.+. ...++++.+++|+.+.++... ...+. ..... .....++++++
T Consensus 149 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (275)
T PRK05876 149 -PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD 227 (275)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH
Confidence 22345779999997555544432 235899999999998876310 01110 00000 01122578999
Q ss_pred hHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhh
Q 005818 574 ELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAY 611 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~ 611 (676)
|+|+.++.++.++. .|.+.+ +.....+.+...+.
T Consensus 228 dva~~~~~ai~~~~--~~~~~~--~~~~~~~~~~~~~~ 261 (275)
T PRK05876 228 DIAQLTADAILANR--LYVLPH--AASRASIRRRFERI 261 (275)
T ss_pred HHHHHHHHHHHcCC--eEEecC--hhhHHHHHHHHHHH
Confidence 99999999997643 444443 33444455444443
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=142.15 Aligned_cols=196 Identities=14% Similarity=0.045 Sum_probs=136.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+|+|+||||+|+||.+|+++|+++|++| .++.+|+.|++++.+++++. ++|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999865 35558999999888877653 579
Q ss_pred EEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHH----HcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCR----ENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||....... ....++....++.|+.++.++++++. +.+. +++++||.....
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~------------------ 146 (246)
T PRK05653 85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT------------------ 146 (246)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc------------------
Confidence 99999986521111 11223345678999999999998885 3454 566666643221
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH--HHHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--ITKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
+..+...|+.+|...|.+++.+.+ ..++++..+||+.++++... ................+++++|+++++..++
T Consensus 147 ~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 226 (246)
T PRK05653 147 GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLA 226 (246)
T ss_pred CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 123346799999999998888642 35899999999999887421 1111111111111246788899999999988
Q ss_pred hcC---C-CceeEccCCC
Q 005818 584 KRN---L-SGIWNFTNPG 597 (676)
Q Consensus 584 ~~~---~-~g~yn~~~~~ 597 (676)
... . +.+|++.++.
T Consensus 227 ~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 227 SDAASYITGQVIPVNGGM 244 (246)
T ss_pred CchhcCccCCEEEeCCCe
Confidence 653 1 2488888764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.6e-15 Score=144.11 Aligned_cols=191 Identities=14% Similarity=0.086 Sum_probs=135.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------------eeccccCCChHHHHHHhhcc----
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
+|+++||||+|+||+++++.|+++|++| .++.+|+.|.+.+.++++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999765 24678999999888877542
Q ss_pred -CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH-----HcC-CcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 432 -KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR-----ENG-LLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 432 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~-----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
++|.|||+||.... +..+...++....+++|+.++.++++++. +.+ .++|++||...+.+
T Consensus 86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 153 (249)
T PRK12827 86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG------------ 153 (249)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC------------
Confidence 57999999997521 11222234456778999999999999997 334 36777777655421
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH---HHH-HHHHhcCceeccCCCccchhhHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR---NFI-TKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~---~~~-~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
..+...|+.+|...+.+++.+.. ..+++++.++|+.++++. .+. ..+....+ ...+...+|++
T Consensus 154 ------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~va 223 (249)
T PRK12827 154 ------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP----VQRLGEPDEVA 223 (249)
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC----CcCCcCHHHHH
Confidence 12346799999999998887642 348999999999999874 111 11211111 11345789999
Q ss_pred HHHHHHHhcC---C-CceeEccCC
Q 005818 577 PISVEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 577 ~~~~~~~~~~---~-~g~yn~~~~ 596 (676)
++++.++... . +..+++.++
T Consensus 224 ~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 224 ALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHcCcccCCccCcEEEeCCC
Confidence 9999888643 2 237777654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=143.57 Aligned_cols=196 Identities=15% Similarity=0.075 Sum_probs=136.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++|+||||+|+||++++++|+++|++| ..+.+|++|.+++.++++.. ++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999754 35667999998888777653 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... ......+.+..+++|+.++.++++++.+ .+ .+++++||.....
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~---------------- 146 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV---------------- 146 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc----------------
Confidence 99999999652111 1222334456789999999888877754 34 3677777754221
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHH---HHHHHhcC-----cee------ccCCCc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNF---ITKISRYN-----KVV------NIPNSM 569 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~---~~~~~~~~-----~~~------~~~~~~ 569 (676)
+......|+.||...+.+++.+. ...++++..++|+.++++..+ +....... ... .....+
T Consensus 147 --~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (259)
T PRK12384 147 --GSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG 224 (259)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence 11223679999999999888864 247899999999988765422 11111000 000 112367
Q ss_pred cchhhHHHHHHHHHhcC---C-CceeEccCCCc
Q 005818 570 TILDELLPISVEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~~ 598 (676)
++++|++++++.++... . +.+||+.+++.
T Consensus 225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred CCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 89999999999887654 2 24799988764
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=145.64 Aligned_cols=200 Identities=13% Similarity=0.067 Sum_probs=137.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
+++++||||+|+||++++++|+++|++| .++++|++|.+++.++++.+ ++|+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999754 45678999999998887753 5799
Q ss_pred EEECccccCCCC---cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 436 VFNAAGVTGRPN---VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 436 Vih~a~~~~~~~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|||+||....+. .+...++....+++|+.++.++++++.+. ..+++++||.....+
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------- 161 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG---------------- 161 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc----------------
Confidence 999999652111 11223556688999999999999988642 246788877643211
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------------HHHHHHhc-CceeccCCCccc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------------FITKISRY-NKVVNIPNSMTI 571 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------------~~~~~~~~-~~~~~~~~~~~~ 571 (676)
......|+.+|...|.+++.+.+ ..++++..++|+.+..+.. .+..+... ..........++
T Consensus 162 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (280)
T PLN02253 162 --GLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELT 239 (280)
T ss_pred --CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCC
Confidence 01125699999999999988643 3589999999998875420 00000000 000011123578
Q ss_pred hhhHHHHHHHHHhcC----CCceeEccCCCcccH
Q 005818 572 LDELLPISVEMAKRN----LSGIWNFTNPGVVSH 601 (676)
Q Consensus 572 v~D~a~~~~~~~~~~----~~g~yn~~~~~~~s~ 601 (676)
.+|++++++.++... .+.++++.++...+.
T Consensus 240 ~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 240 VDDVANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred HHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 999999999988653 224778877654443
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-14 Score=139.96 Aligned_cols=228 Identities=15% Similarity=0.095 Sum_probs=150.6
Q ss_pred CCCCCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|...|+.+++|||||++ .||+++++.|+++ +++|++.+|..... ..+.+... . .....+++|++|++++++++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~-~-g~~~~~~~Dv~d~~~v~~~~ 76 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAES-L-GSDFVLPCDVEDIASVDAVF 76 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHh-c-CCceEEeCCCCCHHHHHHHH
Confidence 45567789999999997 9999999999999 67888877753111 11111111 1 12347899999999988776
Q ss_pred cc-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCC
Q 005818 78 LT-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~ 143 (676)
+. .++|++||+||.... +.+.+++...++.|+.++.++.+++... ..-.++|++||........
T Consensus 77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~-- 154 (271)
T PRK06505 77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP-- 154 (271)
T ss_pred HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC--
Confidence 32 379999999997531 2344566788899999999988766431 1125899999964322111
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
....|+.+|...+.+.+.++.+. |+++..+.||.+-.+......-........... .++
T Consensus 155 ------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~--~p~---- 216 (271)
T PRK06505 155 ------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRN--SPL---- 216 (271)
T ss_pred ------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhc--CCc----
Confidence 13469999999999998887764 799999999999776421100001111111111 111
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|++.+++.++.... .++.+.+.++.
T Consensus 217 ---~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 217 ---RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred ---cccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 124567999999999986432 45667676653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=145.49 Aligned_cols=192 Identities=16% Similarity=0.147 Sum_probs=139.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+|+++||||+|+||++++++|+++|++| .++.+|++|.+.++++++.. ++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i 125 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL 125 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999754 35678999999888877653 67
Q ss_pred CEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 434 THVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 434 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|+|||+|+.... +..+...++....+++|+.++.++++++.+. +.++|++||...|...
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------------- 189 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------------- 189 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----------------
Confidence 999999996421 0111223344577999999999999998763 3578888887766321
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
.....|+.+|...+.+++.+.. ..++++..++|+.++.+.. .+..... .. ....+.+++|++++
T Consensus 190 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~dva~~ 263 (290)
T PRK06701 190 --ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---NT-PMQRPGQPEELAPA 263 (290)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---cC-CcCCCcCHHHHHHH
Confidence 1225699999999999988753 3589999999999987631 1111111 11 12357889999999
Q ss_pred HHHHHhcC---CCc-eeEccCCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~~ 597 (676)
++.++... ..| ++++.++.
T Consensus 264 ~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 264 YVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHcCcccCCccCcEEEeCCCc
Confidence 99988754 234 67776653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=140.95 Aligned_cols=219 Identities=16% Similarity=0.155 Sum_probs=140.9
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHH----HHHHc--
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLV----HFILL-- 78 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~----~~~~~-- 78 (676)
+.++||||+|+||+++++.|+++ +++|++..|...... .+.+. .....++..+.+|++|.+.+ .++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELN-ARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHH-hccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 57999999999999999999999 677877655321111 01111 11123567789999998754 33321
Q ss_pred --c-CCCCEEEEccccCCcCC----cCC-----------ChHHHHHHHHHHHHHHHHHHHHcC---------CCceEEEE
Q 005818 79 --T-EKIDTIMHFAAQTHVDN----SFG-----------NSFEFTKNNIYGTHVLLEACKITG---------QIKRFIHV 131 (676)
Q Consensus 79 --~-~~~d~Vih~a~~~~~~~----~~~-----------~~~~~~~~nv~~~~~ll~a~~~~~---------~~~~~v~~ 131 (676)
. .++|+|||+||...... ... ++...++.|+.++..+.+++.... ...++|++
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 1 36999999999754211 111 245678999999999988764321 01357777
Q ss_pred ecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHH
Q 005818 132 STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLA 208 (676)
Q Consensus 132 SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 208 (676)
||..... +..+...|+.+|...+.+++.++.+ .|+++++++||.+..+...+. ......
T Consensus 159 ~s~~~~~--------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~----~~~~~~ 220 (267)
T TIGR02685 159 CDAMTDQ--------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF----EVQEDY 220 (267)
T ss_pred hhhhccC--------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch----hHHHHH
Confidence 7743321 1123457999999999999988776 489999999999876643211 111222
Q ss_pred HCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 209 MKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
... .++ + ..+...+|++++++.++.... .+..+.+.++.
T Consensus 221 ~~~--~~~---~---~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 221 RRK--VPL---G---QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred HHh--CCC---C---cCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence 111 111 0 124577999999999886532 45667776654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-15 Score=140.34 Aligned_cols=162 Identities=19% Similarity=0.283 Sum_probs=122.1
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCce----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCcch
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPF----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDW 450 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 450 (676)
|+|+||||++|+.|+++|+++|++| +++.+|+.|++.+.++++++ |+|||+++.. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~--d~vi~~~~~~---~--- 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGA--DAVIHAAGPP---P--- 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTS--SEEEECCHST---T---
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhc--chhhhhhhhh---c---
Confidence 7999999999999999999999865 77889999999999999988 9999999854 1
Q ss_pred hccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHH
Q 005818 451 CETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE 529 (676)
Q Consensus 451 ~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~ 529 (676)
. +...+.+++++|++.++ +++++||..+|...... +.... ... ...|...|..+|+.++.
T Consensus 73 --~--------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~-------~~~~~-~~~-~~~~~~~~~~~e~~~~~ 133 (183)
T PF13460_consen 73 --K--------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL-------FSDED-KPI-FPEYARDKREAEEALRE 133 (183)
T ss_dssp --T--------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE-------EEGGT-CGG-GHHHHHHHHHHHHHHHH
T ss_pred --c--------cccccccccccccccccccceeeeccccCCCCCcc-------ccccc-ccc-hhhhHHHHHHHHHHHHh
Confidence 1 17788999999999998 56677777776422110 11111 111 15688999999999864
Q ss_pred ccCeEEEEeeecccCCCCChHHHHHHHHhcCcee----ccCCCccchhhHHHHHHHHHhc
Q 005818 530 YDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV----NIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 530 ~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.+++++++||+.+||+..- ..... ....++++++|+|++++.++++
T Consensus 134 ----~~~~~~ivrp~~~~~~~~~------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 134 ----SGLNWTIVRPGWIYGNPSR------SYRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp ----STSEEEEEEESEEEBTTSS------SEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred ----cCCCEEEEECcEeEeCCCc------ceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 2789999999999987411 11111 1122899999999999998863
|
... |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=142.85 Aligned_cols=193 Identities=15% Similarity=0.163 Sum_probs=135.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
++|+||||+|+||.+++++|+++|++| .++.+|+.|++++.++++.+ ++|+|
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 85 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL 85 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999765 26789999999999888765 68999
Q ss_pred EECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+|+.... |......++.+..+++|+.++.++++.+.. .+ .++|++||...+. +
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~ 147 (251)
T PRK07231 86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR------------------P 147 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC------------------C
Confidence 999996421 011123345567789999998888877754 33 4677777765542 2
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHH----HHH-hcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT----KIS-RYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~----~~~-~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.+|...+.+++.+.+ ..++++..++|+.+..+. .... ... ..... .....+.+++|+|.++
T Consensus 148 ~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~ 226 (251)
T PRK07231 148 RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT-IPLGRLGTPEDIANAA 226 (251)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC-CCCCCCcCHHHHHHHH
Confidence 23456799999999988887632 348999999999887652 1111 000 00000 1123578999999999
Q ss_pred HHHHhcC---CCc-eeEccCC
Q 005818 580 VEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~ 596 (676)
+.++... ..| .+.+.++
T Consensus 227 ~~l~~~~~~~~~g~~~~~~gg 247 (251)
T PRK07231 227 LFLASDEASWITGVTLVVDGG 247 (251)
T ss_pred HHHhCccccCCCCCeEEECCC
Confidence 9998654 234 4555544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=143.03 Aligned_cols=207 Identities=18% Similarity=0.186 Sum_probs=141.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-----cCCC--CCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-----KNLN--PSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-----~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|++++||||||+|+||+++++.|+++ +++|++++|....... +... ......++.++.+|++|++++.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 44589999999999999999999999 6788888876432100 0000 0012346888999999999988777
Q ss_pred cc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcC
Q 005818 78 LT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.. .++|+|||+|+..... .+.+++...+++|+.++.++++++... ..-.++|++||.......
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 156 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK----- 156 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc-----
Confidence 43 2799999999975432 233445678889999999999988642 112578999884321110
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCC-ccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNN-VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~-i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
...+...|+.+|...|.+++.++.+. ++++..+.|+. +-.+. .+....+..
T Consensus 157 -------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~----------~~~~~~~~~-------- 211 (273)
T PRK08278 157 -------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA----------VRNLLGGDE-------- 211 (273)
T ss_pred -------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH----------HHhcccccc--------
Confidence 11234679999999999999888764 79999999984 32211 111111110
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
....+...+|++++++.++...
T Consensus 212 ~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 212 AMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred cccccCCHHHHHHHHHHHhcCc
Confidence 1113568899999999998754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.5e-14 Score=138.24 Aligned_cols=226 Identities=14% Similarity=0.074 Sum_probs=147.7
Q ss_pred CCCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
.++.|+++||||+ +.||.++++.|+++ +++|++.+|.... ...+.+.......++..+++|++|+++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence 3567899999997 89999999999999 6788887764321 1111111111134688899999999998877632
Q ss_pred ----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+|+.... +.+.+++...++.|+.++..+.+++... .+-.++|++||....-..
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------ 155 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV------ 155 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC------
Confidence 369999999987531 2233345567889999988887776542 112589999996442111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
.....|+.+|...+.+.+.++.++ |+++..+.||.+-.+......-........... .++
T Consensus 156 --------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~------- 218 (257)
T PRK08594 156 --------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--APL------- 218 (257)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CCc-------
Confidence 113469999999999998877653 799999999998765321000000111111111 111
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|++++++.++.... .++.+.+.++
T Consensus 219 ~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 219 RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred cccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 135678999999999886432 4566666554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=136.87 Aligned_cols=207 Identities=23% Similarity=0.195 Sum_probs=146.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC---CCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---SRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
.|++++++|||||+.||..+++.|.++ ++.++++.|+.. .+..+.. ....-.++++.+||++++++.++...
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~--kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR--GYNLILVARRED--KLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHH--HHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH
Confidence 466789999999999999999999999 788888888642 1111111 11234588999999999998877632
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
..+|++||+||..... .++++..+.++.|+.++..|-.+.. +.+ -.++|.++|.+.|-+...
T Consensus 79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~----- 152 (265)
T COG0300 79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPY----- 152 (265)
T ss_pred HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcc-----
Confidence 3799999999997643 3555666899999998888776654 222 358999999777644432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|++||.+.-.+....+.+ .|+.++.+.||.+.-+.... .+..... ....+
T Consensus 153 ---------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~------------~~~~~~~---~~~~~ 208 (265)
T COG0300 153 ---------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA------------KGSDVYL---LSPGE 208 (265)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc------------ccccccc---ccchh
Confidence 345999999877766665544 48999999999887543310 0000100 00122
Q ss_pred eeeeHHHHHHHHHHHHhcCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~ 244 (676)
-++..+|+|+..+..+++..
T Consensus 209 ~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 209 LVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred hccCHHHHHHHHHHHHhcCC
Confidence 47788999999999998653
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-14 Score=141.99 Aligned_cols=206 Identities=16% Similarity=0.108 Sum_probs=142.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||.+++++|+++ |++|++++|..... +.+.. .....++.++.+|+.|++.+..+++.
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKL--EALAARLPYPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 34689999999999999999999999 67888888864221 11100 01234788999999999988776532
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+..... .+.++....++.|+.++.++++++... .+..++|++||...+.+..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------- 147 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP----------- 147 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----------
Confidence 4689999999976432 223344567889999999999887541 1246799998854332211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...+.+++.++.+ .+++++++.||.+..+... ...... . ... ...+..+
T Consensus 148 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~------~~~~~~-~-~~~--------~~~~~~~ 208 (263)
T PRK09072 148 ---GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS------EAVQAL-N-RAL--------GNAMDDP 208 (263)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh------hhcccc-c-ccc--------cCCCCCH
Confidence 1345999999998888877765 3799999999988655321 000000 0 000 0135678
Q ss_pred HHHHHHHHHHHhcCC
Q 005818 230 EDVAEAFDTILHKGE 244 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~ 244 (676)
+|+|++++.++++..
T Consensus 209 ~~va~~i~~~~~~~~ 223 (263)
T PRK09072 209 EDVAAAVLQAIEKER 223 (263)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998764
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.6e-14 Score=139.28 Aligned_cols=232 Identities=15% Similarity=0.098 Sum_probs=147.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|++.++|||| |+||++++++|. + +++|++.+|...... .+.+. ....++.++++|++|++++.++++.
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~ 74 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLR--EAGFDVSTQEVDVSSRESVKALAATAQTL 74 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHH--hcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence 4678999998 799999999995 6 688999888642111 01111 1134678899999999998887743
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCC------CCcCCCCCC--
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETD------EDAVVGNHE-- 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~------~~~~~~~~e-- 150 (676)
.++|+|||+||... ..+++...+++|+.++.++++++... ..-.++|++||........ ........+
T Consensus 75 g~id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T PRK06940 75 GPVTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEEL 151 (275)
T ss_pred CCCCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccc
Confidence 36999999999753 23567889999999999999888653 1113567777754432210 000000000
Q ss_pred -CCC-------CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceee
Q 005818 151 -ASQ-------LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIH 217 (676)
Q Consensus 151 -~~~-------~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~ 217 (676)
..+ ..+...|+.+|...+.+++.++.+ +|+++..+.||.+..+.... .............. .++
T Consensus 152 ~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~p~- 228 (275)
T PRK06940 152 LSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK--SPA- 228 (275)
T ss_pred cccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh--CCc-
Confidence 000 013457999999999998877665 37999999999998764311 00001111111111 111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|+|.+++.++.... .++.+.+.++.
T Consensus 229 ------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 229 ------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred ------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 136778999999999885322 46677776653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-14 Score=141.10 Aligned_cols=181 Identities=19% Similarity=0.115 Sum_probs=128.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|.+++.++++.+ ++|+||
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3689999999999999999999999754 35668899888777665533 579999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH---cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE---NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~---~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
|+||...... .....++++..+++|+.++.++++++.. .+.++++++|+.... +....
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~------------------~~~~~ 147 (249)
T PRK06500 86 INAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI------------------GMPNS 147 (249)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc------------------CCCCc
Confidence 9999652111 1233455667899999999999999975 345677777754321 11234
Q ss_pred CchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH------------HHHHHhcCceeccCCCccchhhHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF------------ITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~------------~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+.|+.+|...|.+++.+.+ ..++++..++|+.+++|..- ...+....+ ..-+...+|++++
T Consensus 148 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~ 223 (249)
T PRK06500 148 SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP----LGRFGTPEEIAKA 223 (249)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC----CCCCcCHHHHHHH
Confidence 6799999999999977642 35899999999999987310 111111111 1124578999999
Q ss_pred HHHHHhcC
Q 005818 579 SVEMAKRN 586 (676)
Q Consensus 579 ~~~~~~~~ 586 (676)
+..++..+
T Consensus 224 ~~~l~~~~ 231 (249)
T PRK06500 224 VLYLASDE 231 (249)
T ss_pred HHHHcCcc
Confidence 99988643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.5e-14 Score=154.95 Aligned_cols=221 Identities=19% Similarity=0.203 Sum_probs=154.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
..+++|||||+|.||.++++.|+++ +++|++.+|.... .+.+.. ....++..+.+|++|++++.++++. .
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEG--AKKLAE-ALGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHH-HhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 6788888885421 111111 1133567789999999998877743 3
Q ss_pred CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 81 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++|++||+||.... +.+.+++...+++|+.++.++.+++... .+-.+||++||...+....
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 409 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP------------- 409 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC-------------
Confidence 69999999997531 2334456788999999999999887653 2236899999976543322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+...|+.+|...+.+++.++.+. |+++.++.||.|..+...... .-........+..+ . ..+...+
T Consensus 410 -~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~ 479 (520)
T PRK06484 410 -PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP--L-------GRLGDPE 479 (520)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC--C-------CCCcCHH
Confidence 23469999999999999887654 799999999999877431100 00011111221111 1 1256789
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 231 DVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 231 D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
|++++++.++... ..++.+.+.++
T Consensus 480 dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 480 EVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHHhCccccCccCcEEEECCC
Confidence 9999999988653 25677877665
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-14 Score=142.45 Aligned_cols=195 Identities=10% Similarity=0.042 Sum_probs=133.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++|+|||+|
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3689999999999999999999999865 46778999999998888744 679999999
Q ss_pred cccCCC-CcchhccchhhHHhhhhhhHHH----HHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 441 GVTGRP-NVDWCETHKPETIRTNVVGTLT----LADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~----ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|..... ..+...++.+..+++|+.++.. ++..+++.+. ++|++||...+. +.....
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~------------------~~~~~~ 144 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI------------------YTPLGA 144 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC------------------CCCCcc
Confidence 965211 1112334566788999998554 4455556554 778887754321 111225
Q ss_pred chhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-HH-HHHHhcCc-------------ee---ccCCCccchh
Q 005818 515 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-FI-TKISRYNK-------------VV---NIPNSMTILD 573 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~~-~~~~~~~~-------------~~---~~~~~~~~v~ 573 (676)
.|+.+|...+.+.+.+. ...++++.+++|+.+..+.. .. ..+..... .+ .....+...+
T Consensus 145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (273)
T PRK06182 145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPS 224 (273)
T ss_pred HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHH
Confidence 69999999999876642 45689999999999987631 11 11110000 00 0012456889
Q ss_pred hHHHHHHHHHhcCC-CceeEccCC
Q 005818 574 ELLPISVEMAKRNL-SGIWNFTNP 596 (676)
Q Consensus 574 D~a~~~~~~~~~~~-~g~yn~~~~ 596 (676)
|+|++++.++.... ...|+++.+
T Consensus 225 ~vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 225 VIADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred HHHHHHHHHHhCCCCCceeecCcc
Confidence 99999999887653 347776653
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=136.45 Aligned_cols=228 Identities=14% Similarity=0.058 Sum_probs=147.8
Q ss_pred CCCCCCCCeEEEEcC--CchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGA--AGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...++.++++|||| ++.||.++++.|+++ +++|++.+|.......+.+... ....+..+++|+.|+++++++++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~ 77 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKR-LPEPAPVLELDVTNEEHLASLAD 77 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHh-cCCCCcEEeCCCCCHHHHHHHHH
Confidence 334456789999999 899999999999999 6788888764311111111111 12357789999999999887763
Q ss_pred c-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCc
Q 005818 79 T-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
. .++|++||+||.... +.+++++...+++|+.++..+.+++... .+-.++|++|+....+
T Consensus 78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------ 151 (256)
T PRK07889 78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------ 151 (256)
T ss_pred HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------
Confidence 2 369999999997632 1233455567899999999888776532 1124788887632211
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
......|+.+|...+.+.+.++.+ +|+++..+.||.+-.+......-........... .++
T Consensus 152 ---------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~----- 215 (256)
T PRK07889 152 ---------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDER--APL----- 215 (256)
T ss_pred ---------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhc--Ccc-----
Confidence 011345899999999999887765 4899999999999765321100001111111111 111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.+.+...+|+|++++.++.... .++.+.+.++
T Consensus 216 -~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 216 -GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred -ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 0135678999999999986532 4566666554
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=141.05 Aligned_cols=191 Identities=15% Similarity=0.076 Sum_probs=135.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+++|+||||+|+||+.++++|+++|++| ..+.+|+.|.+++.++++.+ ++|+|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL 86 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence 3589999999999999999999999865 34458999999888887754 57999
Q ss_pred EECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+|+..... ......++....+.+|+.++.++++++.+ .+. +++++||...+.. .
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~ 148 (239)
T PRK12828 87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA------------------G 148 (239)
T ss_pred EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC------------------C
Confidence 9999854100 01112233446688999999999998753 333 6777777665521 1
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~ 587 (676)
.+...|+.+|...+.+++.+. ...++++..+||+.++++.... .........+++++|++++++.++....
T Consensus 149 ~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~------~~~~~~~~~~~~~~dva~~~~~~l~~~~ 222 (239)
T PRK12828 149 PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA------DMPDADFSRWVTPEQIAAVIAFLLSDEA 222 (239)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh------cCCchhhhcCCCHHHHHHHHHHHhCccc
Confidence 234679999999988887753 2458999999999999873110 0011112247899999999999987642
Q ss_pred ---Cc-eeEccCCCc
Q 005818 588 ---SG-IWNFTNPGV 598 (676)
Q Consensus 588 ---~g-~yn~~~~~~ 598 (676)
.| .+++.+++.
T Consensus 223 ~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 223 QAITGASIPVDGGVA 237 (239)
T ss_pred ccccceEEEecCCEe
Confidence 24 777766643
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.5e-14 Score=150.34 Aligned_cols=220 Identities=20% Similarity=0.125 Sum_probs=147.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.+++|||||+|+||..++++|.++ +++|+++++.........+.. ..+...+.+|++|++++.++++.
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVAN---RVGGTALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999 688888887432221111110 11346789999999998877642
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+.... +.+.+++...+++|+.+++++++++.... +-.+||++||...+.+..+
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~---------- 352 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG---------- 352 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------
Confidence 268999999997653 22445567889999999999999987632 1268999999665433221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+++.++.+ .++++.++.||.+-.+... . ++...+...... ..+ ......
T Consensus 353 ----~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~--~-~~~~~~~~~~~~-~~l-------~~~~~p 417 (450)
T PRK08261 353 ----QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA--A-IPFATREAGRRM-NSL-------QQGGLP 417 (450)
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh--c-cchhHHHHHhhc-CCc-------CCCCCH
Confidence 346999999877777766554 4899999999988543221 1 111111111110 000 112345
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 230 EDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.|+++++.+++.... .++.+.++++
T Consensus 418 ~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 418 VDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred HHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 799999998886432 4677777664
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-14 Score=142.63 Aligned_cols=194 Identities=16% Similarity=0.191 Sum_probs=136.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
++++||||+|+||.+++++|+++|++| .++.+|+++++++.++++.. ++|+|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 87 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGL 87 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 589999999999999999999999753 45789999999988888753 67999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
||+||...........++....+++|+.++.++++++.+ .+.+++++||...+. +..+
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~~~ 149 (258)
T PRK08628 88 VNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT------------------GQGG 149 (258)
T ss_pred EECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc------------------CCCC
Confidence 999995421122222244557789999999999888754 234677777765442 1123
Q ss_pred CCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHHHHHhcC-------ceeccCCCccchhhHHHHHH
Q 005818 513 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISRYN-------KVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~~~-------~~~~~~~~~~~v~D~a~~~~ 580 (676)
...|+.||...|.+++.+. ...++++..++|+.+++|.. ++....... ........+...+|++++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 229 (258)
T PRK08628 150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAV 229 (258)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHH
Confidence 4679999999999999864 24689999999999998841 111111000 01112235678899999999
Q ss_pred HHHhcC---CCc-eeEccCC
Q 005818 581 EMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 581 ~~~~~~---~~g-~yn~~~~ 596 (676)
.++... ..| .|.+.++
T Consensus 230 ~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 230 FLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred HHhChhhccccCceEEecCC
Confidence 988654 334 5555443
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.9e-13 Score=135.66 Aligned_cols=222 Identities=18% Similarity=0.221 Sum_probs=161.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
++||||||||++|+++++.|+++ +++|.+..|....... .. ..++.+.+|+.++..+...+ .+.|.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~-----~~--~~v~~~~~d~~~~~~l~~a~--~G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAA-----LA--GGVEVVLGDLRDPKSLVAGA--KGVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHh-----hc--CCcEEEEeccCCHhHHHHHh--ccccEEEE
Confidence 57999999999999999999999 6777777776532211 11 68999999999999999998 89999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+.+... ... ...........+..+.+. .+ +++++++|....-.. ....|..+|...
T Consensus 70 i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~~----------------~~~~~~~~~~~~ 125 (275)
T COG0702 70 ISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADAA----------------SPSALARAKAAV 125 (275)
T ss_pred Eecccc-ccc-----chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCCC----------------CccHHHHHHHHH
Confidence 987654 211 223344455555555555 23 688998888543221 134599999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC-CCC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG-EVG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~-~~~ 246 (676)
|..+.. .|++.+++|+..+|..... .. .......+.++...+ ....+++..+|++.++..++..+ ..+
T Consensus 126 e~~l~~----sg~~~t~lr~~~~~~~~~~---~~--~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~~~ 194 (275)
T COG0702 126 EAALRS----SGIPYTTLRRAAFYLGAGA---AF--IEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPATAG 194 (275)
T ss_pred HHHHHh----cCCCeEEEecCeeeeccch---hH--HHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcccC
Confidence 998874 5899999997766654431 11 112222333333223 23679999999999999999766 467
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~~ 275 (676)
++|.+++++..+..++...+....|++..
T Consensus 195 ~~~~l~g~~~~~~~~~~~~l~~~~gr~~~ 223 (275)
T COG0702 195 RTYELAGPEALTLAELASGLDYTIGRPVG 223 (275)
T ss_pred cEEEccCCceecHHHHHHHHHHHhCCcce
Confidence 89999999999999999999999998654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-14 Score=142.22 Aligned_cols=186 Identities=12% Similarity=0.022 Sum_probs=132.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++|+||||+|+||.++++.|+++|++| .++.+|+.|.+.+.++++.+ ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999754 35678999999988888754 6799
Q ss_pred EEECccccCCCCcc-h-hccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPNVD-W-CETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~~~-~-~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||....+... . ..+.....+++|+.++.++++++.. .+.++|++||...+. +
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~------------------~ 143 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT------------------G 143 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC------------------C
Confidence 99999965211111 1 1222446689999999999998853 335788888876652 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHh--cCcee---ccCCCccchhhHHHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISR--YNKVV---NIPNSMTILDELLPISVE 581 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~--~~~~~---~~~~~~~~v~D~a~~~~~ 581 (676)
..+.+.|+.+|...|.+++.+. ...++++..++|+.+..+. ...... +.... .....+++++|+|++++.
T Consensus 144 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~ 221 (263)
T PRK06181 144 VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI--RKRALDGDGKPLGKSPMQESKIMSAEECAEAILP 221 (263)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc--chhhccccccccccccccccCCCCHHHHHHHHHH
Confidence 1234679999999999987753 3458999999999887652 111111 11110 111268899999999999
Q ss_pred HHhcCCCce
Q 005818 582 MAKRNLSGI 590 (676)
Q Consensus 582 ~~~~~~~g~ 590 (676)
+++.....+
T Consensus 222 ~~~~~~~~~ 230 (263)
T PRK06181 222 AIARRKRLL 230 (263)
T ss_pred HhhCCCCEE
Confidence 998643333
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-14 Score=141.70 Aligned_cols=195 Identities=12% Similarity=0.066 Sum_probs=137.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-CCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~ 443 (676)
.++++||||+|+||.++++.|+++|++| .++.+|++|.+.+.++++.. ++|+|||+||..
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~ 88 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIA 88 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 3689999999999999999999999865 35568999998888888753 469999999965
Q ss_pred CCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 444 GRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
.... .+....+.+..+.+|+.++.++++++.+. + .++|++||...+.. ..+...|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~y 150 (245)
T PRK07060 89 SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG------------------LPDHLAY 150 (245)
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC------------------CCCCcHh
Confidence 2111 11223345566789999999999988753 2 46788887655421 1233679
Q ss_pred hhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-H-HHHHhcCcee--ccCCCccchhhHHHHHHHHHhcCC--
Q 005818 517 SKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-I-TKISRYNKVV--NIPNSMTILDELLPISVEMAKRNL-- 587 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-~-~~~~~~~~~~--~~~~~~~~v~D~a~~~~~~~~~~~-- 587 (676)
+.+|...|.+++.+.. ..++++..++|+.++++... . .......... .....+++++|++++++.++..+.
T Consensus 151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 230 (245)
T PRK07060 151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM 230 (245)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 9999999999988743 35799999999999987421 0 0000000000 112368899999999999997542
Q ss_pred --CceeEccCC
Q 005818 588 --SGIWNFTNP 596 (676)
Q Consensus 588 --~g~yn~~~~ 596 (676)
+..+++.++
T Consensus 231 ~~G~~~~~~~g 241 (245)
T PRK07060 231 VSGVSLPVDGG 241 (245)
T ss_pred ccCcEEeECCC
Confidence 236666554
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=4e-14 Score=139.92 Aligned_cols=183 Identities=13% Similarity=0.060 Sum_probs=131.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTG 444 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 444 (676)
++++||||+|+||++++++|+++|++| ..+++|++|++++.++++.. ++|+|||+|+...
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR 88 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 689999999999999999999999765 45678999999999888763 4799999999652
Q ss_pred C-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 445 R-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 445 ~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
. +..+...++....+++|+.++.++++++.. .+ .++|++||..... +..+.+.|+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~------------------~~~~~~~Y~~ 150 (252)
T PRK08220 89 MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV------------------PRIGMAAYGA 150 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc------------------CCCCCchhHH
Confidence 1 111123445667899999999999998853 22 3677777754321 2233477999
Q ss_pred hHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-HHH--HHhcC---------ceeccCCCccchhhHHHHHHHHH
Q 005818 519 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-ITK--ISRYN---------KVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 519 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-~~~--~~~~~---------~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
+|...|.+++.+.+ ..++++..++|+.++++... +.. ..... ........+.+++|+|++++.++
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 230 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA 230 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh
Confidence 99999999988743 36899999999999988421 000 00000 00011236788999999999988
Q ss_pred hc
Q 005818 584 KR 585 (676)
Q Consensus 584 ~~ 585 (676)
..
T Consensus 231 ~~ 232 (252)
T PRK08220 231 SD 232 (252)
T ss_pred cc
Confidence 64
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-14 Score=141.34 Aligned_cols=201 Identities=15% Similarity=0.075 Sum_probs=134.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.|+|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+ +
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 83 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGK 83 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999754 23578999999998888764 3
Q ss_pred CCEEEECccccCC----CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 433 PTHVFNAAGVTGR----PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 433 ~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
+|+|||+|+..+. +......+.....+++|+.++..+++++.. .+ .++|++||...+..+... .
T Consensus 84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~ 156 (256)
T PRK09186 84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE-------I 156 (256)
T ss_pred ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch-------h
Confidence 7999999974310 011122233456688999888877666543 34 377888876554322110 1
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
.++. +......|+.||...|.+.+.+. ...++++..++|+.++.+. .+.... +... ....+++++|+|++
T Consensus 157 ~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~-~~~~---~~~~~~~~~dva~~ 231 (256)
T PRK09186 157 YEGT-SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAY-KKCC---NGKGMLDPDDICGT 231 (256)
T ss_pred cccc-ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHH-HhcC---CccCCCCHHHhhhh
Confidence 1222 22222469999999999987653 3468999999999887652 222221 1111 12357899999999
Q ss_pred HHHHHhcC---CCc-eeEccCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~ 596 (676)
++.++... .+| .+++.++
T Consensus 232 ~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 232 LVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred HhheeccccccccCceEEecCC
Confidence 99998754 235 5555544
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.7e-14 Score=141.16 Aligned_cols=148 Identities=17% Similarity=0.153 Sum_probs=110.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc------CCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV------KPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~------~~d~Vih~ 439 (676)
+++|+||||+|+||.++++.|+++|++| ..+.+|++|.++++++++.+ ++|+|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4589999999999999999999999865 45678999999888877653 57999999
Q ss_pred ccccCCCCc-chhccchhhHHhhhhhh----HHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 440 AGVTGRPNV-DWCETHKPETIRTNVVG----TLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 440 a~~~~~~~~-~~~~~~~~~~~~~Nv~g----~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
||....... +...++....+++|+.| +.++++++++.+. ++|++||...+. +..+.
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~------------------~~~~~ 145 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV------------------PMKYR 145 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC------------------CCCcc
Confidence 986521111 11123345678999999 5566777776654 778877754331 22344
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCCh
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 549 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 549 (676)
..|+.||...|.+++.+. ...++++..++|+.+..+
T Consensus 146 ~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 146 GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 689999999999988763 456899999999988755
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.1e-14 Score=136.40 Aligned_cols=201 Identities=16% Similarity=0.075 Sum_probs=136.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCC--HHHHHHHH---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVAS--ADLVHFIL--- 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d--~~~~~~~~--- 77 (676)
|++++|+||||+|+||+++++.|+++ +++|++++|....... ..+. ......+..+.+|+.+ .+.+.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIV-EAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHH-HcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 55689999999999999999999998 6788888886532110 0000 0112346778899975 33444332
Q ss_pred -cc--CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 78 -LT--EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 78 -~~--~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.. .++|+|||+|+.... +.+.+++...+++|+.++.++++++... ....++|++||.....+
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~------- 153 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP------- 153 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC-------
Confidence 11 368999999996432 2233445567899999999998877542 11468999998543211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
......|+.+|...+.+++.++.+. ++++++++||.|.++.... .. .+ ..
T Consensus 154 -------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~~--------~~---------~~ 207 (239)
T PRK08703 154 -------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--SH--------PG---------EA 207 (239)
T ss_pred -------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--cC--------CC---------CC
Confidence 1123469999999999998887764 5899999999999885310 00 01 01
Q ss_pred eEeeeeHHHHHHHHHHHHh
Q 005818 223 VRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~ 241 (676)
...+...+|++.++..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 208 KSERKSYGDVLPAFVWWAS 226 (239)
T ss_pred ccccCCHHHHHHHHHHHhC
Confidence 1134678999999999886
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=4e-14 Score=139.78 Aligned_cols=191 Identities=13% Similarity=0.101 Sum_probs=135.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999654 45789999999988887643 479
Q ss_pred EEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+|+....... .....+.+..+++|+.++.++++++. +.+ .+++++||...+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~---------------- 146 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS---------------- 146 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----------------
Confidence 99999986421111 11123335678999999999988875 333 478888887665321
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--HH----------HHHHhcCceeccCCCccchh
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FI----------TKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~----------~~~~~~~~~~~~~~~~~~v~ 573 (676)
.....|+.+|.+.+.+++.+.+. .++++..++|+.++++.. +. ..+... .. ...+...+
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~ 220 (250)
T TIGR03206 147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA---IP-LGRLGQPD 220 (250)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhc---CC-ccCCcCHH
Confidence 12356999999999888886433 489999999999998731 11 111110 11 12355789
Q ss_pred hHHHHHHHHHhcCC----CceeEccCC
Q 005818 574 ELLPISVEMAKRNL----SGIWNFTNP 596 (676)
Q Consensus 574 D~a~~~~~~~~~~~----~g~yn~~~~ 596 (676)
|+|+++..++..+. +.++++.++
T Consensus 221 dva~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 221 DLPGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence 99999999886542 348888765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.9e-14 Score=144.90 Aligned_cols=185 Identities=12% Similarity=0.056 Sum_probs=131.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++++||||+|+||.++++.|+++ +++|++.+|...... .+.+........+.++++|+.|.+++.++++.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 678888887642111 11111111123688999999999998877643
Q ss_pred --CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHH---cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKI---TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~---~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... ..+.+..+..+.+|+.+...|.+.+.. .+ ..++|++||...+..... ..+..+.
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~--~~~~~~~ 166 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN--WDDLNWE 166 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC--ccccccc
Confidence 369999999998653 234566778899999998887766652 12 368999999654332111 0111222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPN 194 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~ 194 (676)
.+..+...|+.||+..+.++++++++ .|+.+..+.||.|..+.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 33445678999999999999988763 36999999999987653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.4e-14 Score=140.45 Aligned_cols=189 Identities=17% Similarity=0.165 Sum_probs=132.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------eeccccCCChHHHHHHhhcc-----CCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~ 443 (676)
++|+||||+|+||++++++|+++|++| .++++|++|+++++++++.+ ++|+|||+||..
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~ 84 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG 84 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 579999999999999999999999755 56789999999999988865 579999999975
Q ss_pred CCCCc-chhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 444 GRPNV-DWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 444 ~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
..... ....++.+..+++|+.|+.++++++ ++.+ .++|++||...+. +......|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------~~~~~~~Y~ 146 (270)
T PRK06179 85 LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL------------------PAPYMALYA 146 (270)
T ss_pred CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC------------------CCCCccHHH
Confidence 21111 1223445678899999999998885 4444 4677877765442 112236799
Q ss_pred hhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcC--------------c-eeccCCCccchhhHHHHH
Q 005818 518 KTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYN--------------K-VVNIPNSMTILDELLPIS 579 (676)
Q Consensus 518 ~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--------------~-~~~~~~~~~~v~D~a~~~ 579 (676)
.+|...|.+++.+. +..++++..++|+.+.++.. ....... . ...........+|+++.+
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 224 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD--ANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTV 224 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc--cccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence 99999999988763 34689999999998876521 0000000 0 000111335678899999
Q ss_pred HHHHhcCCC-ceeEc
Q 005818 580 VEMAKRNLS-GIWNF 593 (676)
Q Consensus 580 ~~~~~~~~~-g~yn~ 593 (676)
+.++..+.. ..|..
T Consensus 225 ~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 225 VKAALGPWPKMRYTA 239 (270)
T ss_pred HHHHcCCCCCeeEec
Confidence 888877653 35544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=136.94 Aligned_cols=220 Identities=15% Similarity=0.172 Sum_probs=142.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+||||||+|.||+++++.|+++ +++|++.+|...... .+.+. ...++..+++|++|++++++++.. .
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELK---EYGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHH---hcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 48999999999999999999999 678888888642110 01111 113578899999999998877742 3
Q ss_pred CCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 81 KIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 81 ~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
++|+|||+||.... +...+++...+..|+.++..+.+++ .......+||++||...+.+..
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~--------- 146 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP--------- 146 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC---------
Confidence 79999999997431 1233344456677777765544332 2112246899999976543221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC--------C-hHHH-HHHHHHCCCCceee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--------K-LIPK-FILLAMKGKPLPIH 217 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~--------~-~~~~-~~~~~~~~~~~~~~ 217 (676)
+...|+.+|...+.+++.++.++ |+++..+.||.+-.+..... . -... ........ .+.
T Consensus 147 -----~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~- 218 (259)
T PRK08340 147 -----PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--TPL- 218 (259)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--CCc-
Confidence 23469999999999999888764 68999999998876643100 0 0000 00111111 111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|+++++++++.... .+++..+.+|.
T Consensus 219 ------~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 219 ------KRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred ------cCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 135678999999999886432 45666666653
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=135.19 Aligned_cols=223 Identities=17% Similarity=0.108 Sum_probs=146.3
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|+++++|||||++ .||+++++.|+++ +++|++.+|.... ...+.+.. ....+..+.+|++|+++++++++.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAA--QLGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHh--ccCCceEeecCCCCHHHHHHHHHHHH
Confidence 5678999999985 9999999999999 6778777765211 11111111 123466789999999998877732
Q ss_pred ---CCCCEEEEccccCCcC---------CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+||..... .+.+++...+++|+.+...+.+++... .+-.++|++||.+......
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~----- 154 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 154 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC-----
Confidence 3689999999975321 223345567889999988888776532 1125799999865321111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
....|+.+|...+.+++.++.+ +|+++..+.||.+-.+......-............ +.
T Consensus 155 ---------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~------- 216 (262)
T PRK07984 155 ---------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PI------- 216 (262)
T ss_pred ---------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcC--CC-------
Confidence 1246999999999999988775 38999999999986542110000111111111111 11
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|++.++++++.... .++.+.+.++
T Consensus 217 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 217 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred cCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 135678999999999986432 4566666655
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-13 Score=134.82 Aligned_cols=219 Identities=14% Similarity=0.092 Sum_probs=144.7
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCccc---------cccCCC--CCCCCCCeEEEEecCCCHH
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCS---------NLKNLN--PSRLSPNFKFIKGDVASAD 71 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---------~~~~~~--~~~~~~~v~~v~~Dl~d~~ 71 (676)
+++++||||||+| .||.++++.|+++ +++|++.++..... ....+. ......++.++++|++|.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 5678999999995 8999999999999 56777764321100 000000 0112346888999999999
Q ss_pred HHHHHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccC
Q 005818 72 LVHFILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYG 138 (676)
Q Consensus 72 ~~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg 138 (676)
++.+++.. .++|+|||+|+.... +.+.+++...++.|+.+...+.+++- +.+ -.+||++||...+.
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~ 160 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC
Confidence 98877732 258999999997542 23344566788999999998864442 222 35999999965432
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
+. .+...|+.+|...+.+.+.++.+ ++++++.++||.+-.+... ..+........++
T Consensus 161 ~~--------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~- 220 (256)
T PRK12859 161 PM--------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPF- 220 (256)
T ss_pred CC--------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCC-
Confidence 21 22457999999999998887765 4899999999998765321 1111111111111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|++++++.++.... .++.+.+.++
T Consensus 221 --------~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 221 --------GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred --------CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 124567999999998875432 4555655543
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.5e-14 Score=138.67 Aligned_cols=209 Identities=17% Similarity=0.071 Sum_probs=138.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+++||||+|+||.++++.|+++ +++|++++|...... ...+... ....+.++.+|+.|++++.++++. .
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARAL-GGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhc-CCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999998 677888887542110 0011110 112345678999999988776632 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+...+||++||...+.+..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~----------- 146 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP----------- 146 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC-----------
Confidence 68999999987542 234445567899999999999998642 12236899999965432221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHH---HcCCCEEEEeeCCccCCCCCCCC-----hHHHHHHHHHCCCCceeecCCCceE
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEK-----LIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~ilR~~~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+.+..+. .+++++++++||.+.++...... ............ ...
T Consensus 147 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 213 (272)
T PRK07832 147 ---WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR----------FRG 213 (272)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh----------ccc
Confidence 134599999977777766553 35899999999999887532100 000000000000 011
Q ss_pred eeeeHHHHHHHHHHHHhcC
Q 005818 225 SYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~ 243 (676)
..+..+|+|.+++.+++++
T Consensus 214 ~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 214 HAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 3578899999999999643
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.3e-14 Score=138.18 Aligned_cols=224 Identities=15% Similarity=0.043 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|+.|+||||||+ +.||+++++.|+++ +++|++.+|.... ...+.+... .... ..+++|++|.+++.++++.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~-~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQE-LGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHh-cCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 456899999997 79999999999999 6788887775311 111111111 1122 5789999999998877632
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||.+......
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------ 152 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP------ 152 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC------
Confidence 368999999997531 2344556788999999999988776532 1125899999854321111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+.+.++.+ +|+++..+.||.|..+......-......... ...+. .
T Consensus 153 --------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~pl-------~ 215 (274)
T PRK08415 153 --------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNE--INAPL-------K 215 (274)
T ss_pred --------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhh--hhCch-------h
Confidence 1346999999999999888765 47999999999987653210000000000000 01111 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+...+|++.+++.++... ..++.+.+.+|.
T Consensus 216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 3567899999999988642 256667776653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.1e-14 Score=139.88 Aligned_cols=194 Identities=16% Similarity=0.152 Sum_probs=134.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++++||||+|+||++|+++|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 84 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV 84 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3589999999999999999999999754 45678999999998887754 6799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+|+...... .....++....+++|+.++.++.+++. +.+. +++++||...+.+
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~------------------ 146 (252)
T PRK06138 85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG------------------ 146 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC------------------
Confidence 999999652101 112234455678999999987777653 4443 6777777644321
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCce------eccCCCccchhhHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKV------VNIPNSMTILDELLPI 578 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~------~~~~~~~~~v~D~a~~ 578 (676)
..+.+.|+.+|...+.+++.+.. ..+++++.++|+.++++. .++......... ......+++++|++++
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 226 (252)
T PRK06138 147 GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQA 226 (252)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 12336799999999999988743 348999999999998873 111110000000 0011247889999999
Q ss_pred HHHHHhcCC---Cc-eeEccC
Q 005818 579 SVEMAKRNL---SG-IWNFTN 595 (676)
Q Consensus 579 ~~~~~~~~~---~g-~yn~~~ 595 (676)
++.++..+. .| .+.+.+
T Consensus 227 ~~~l~~~~~~~~~g~~~~~~~ 247 (252)
T PRK06138 227 ALFLASDESSFATGTTLVVDG 247 (252)
T ss_pred HHHHcCchhcCccCCEEEECC
Confidence 999987753 35 455544
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.5e-14 Score=138.93 Aligned_cols=195 Identities=13% Similarity=0.120 Sum_probs=133.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id 91 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD 91 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999754 35789999999987766542 579
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----C-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||.... +......+.....+++|+.++.++++++.+. + .++|++||...+.+...
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~------------- 158 (259)
T PRK08213 92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP------------- 158 (259)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-------------
Confidence 99999996421 1111223344567889999999999988654 3 36778877655532110
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHH----HHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT----KISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~----~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
...+...|+.+|+..|.+++.+.+ ..++++..++|+.+..+. .++. .+....+. .-+...+|++..
T Consensus 159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~ 233 (259)
T PRK08213 159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPL----GRLGDDEDLKGA 233 (259)
T ss_pred -cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCC----CCCcCHHHHHHH
Confidence 012346799999999999988643 357999999998887652 2222 22211111 123457899988
Q ss_pred HHHHHhcC---CCc-eeEccCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~ 596 (676)
+..++... ..| .+++.++
T Consensus 234 ~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 234 ALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred HHHHhCccccCccCCEEEECCC
Confidence 88877543 234 5665554
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-14 Score=140.28 Aligned_cols=223 Identities=19% Similarity=0.154 Sum_probs=148.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++++||||+|+||+++++.|+++ +++|++.+|.... .+.+.. .....+..+++|+.|.+++.++++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAG--LQELEA-AHGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHh-hcCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 6888888886421 111111 1134588899999999888776643
Q ss_pred CCCCEEEEccccCCcC-----CcC----CChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCC
Q 005818 80 EKIDTIMHFAAQTHVD-----NSF----GNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~-----~~~----~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+||..... .+. +++...++.|+.++.++++++...- +-.++|++||...+-+..
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 150 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG------- 150 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC-------
Confidence 3789999999864311 111 2356788999999999998886531 124788888865432211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCCh--HH----HH-HHHHHCCCCceeecC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKL--IP----KF-ILLAMKGKPLPIHGD 219 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~--~~----~~-~~~~~~~~~~~~~~~ 219 (676)
....|+.+|...+.+++.++.++ .+++..+.||.+..+...+... .. .. ....... .+++
T Consensus 151 -------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~--- 219 (262)
T TIGR03325 151 -------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLPI--- 219 (262)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCCC---
Confidence 13459999999999999988875 3789999999998764321100 00 00 0111111 1111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTK 254 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~ 254 (676)
..+...+|++.+++.++..+ -.++++.+.++
T Consensus 220 ----~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 220 ----GRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred ----CCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 13566799999998887542 14566666554
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-14 Score=133.84 Aligned_cols=165 Identities=19% Similarity=0.225 Sum_probs=116.0
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCc-ccccc-CCC-CCCCCCCeEEEEecCCCHHHHHHHHccC-----
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY-CSNLK-NLN-PSRLSPNFKFIKGDVASADLVHFILLTE----- 80 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~-~~~~~-~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~----- 80 (676)
++|||||+|.||..++++|++++ ..+++++.|... ..... .+. ......++.++.+|++|++++.+++...
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 68999999999999999999997 668888888731 11111 000 0122457999999999999999998542
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc-ccCCCCCCcCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE-VYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~~ 155 (676)
+++.|||+|+.... +.+.++....+++++.|+++|+++..... +++||++||.. ++|..+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g-------------- 145 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG-------------- 145 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT--------------
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc--------------
Confidence 67899999998753 23444556788999999999999998865 89999999965 455554
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCcc
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 191 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~ 191 (676)
...|+.++.+++.++...+ +.|++++++.++.+-
T Consensus 146 -q~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 146 -QSAYAAANAFLDALARQRR-SRGLPAVSINWGAWD 179 (181)
T ss_dssp -BHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EBS
T ss_pred -hHhHHHHHHHHHHHHHHHH-hCCCCEEEEEccccC
Confidence 2359999999999998654 569999999988653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-12 Score=135.72 Aligned_cols=190 Identities=12% Similarity=0.106 Sum_probs=127.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
++++||||+|.||..+++.|.++|++| ..+.+|++|.++++++++.. ++|+|||
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~ 290 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVH 290 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 479999999999999999999999865 23457999998888877644 5799999
Q ss_pred CccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 439 AAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 439 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
+||...... .....++....+++|+.++.++.+++... +.++|++||...+.+ ...
T Consensus 291 ~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g------------------~~~ 352 (450)
T PRK08261 291 NAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG------------------NRG 352 (450)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC------------------CCC
Confidence 999652111 11123445577899999999999998763 247888887654421 122
Q ss_pred CCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH----H-HHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 513 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN----F-ITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~----~-~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
...|+.+|...+.+++.+. +..++++..+.|+.+-.+.. + .....+..... ....-.+|+++++..++.
T Consensus 353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l---~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSL---QQGGLPVDVAETIAWLAS 429 (450)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCc---CCCCCHHHHHHHHHHHhC
Confidence 3679999998888877753 34688999999988753310 0 01111100011 112345799999998886
Q ss_pred cC---CCc-eeEccC
Q 005818 585 RN---LSG-IWNFTN 595 (676)
Q Consensus 585 ~~---~~g-~yn~~~ 595 (676)
.. .+| ++++++
T Consensus 430 ~~~~~itG~~i~v~g 444 (450)
T PRK08261 430 PASGGVTGNVVRVCG 444 (450)
T ss_pred hhhcCCCCCEEEECC
Confidence 43 234 555554
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.5e-14 Score=138.00 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=130.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++++||||+|+||++++++|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999999999765 34678999999998888764 579
Q ss_pred EEEECccccCCCC--cchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 435 HVFNAAGVTGRPN--VDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 435 ~Vih~a~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|||+|+...... .+...++....+++|+.++..+++++... +.++|++||...+.+.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------------ 149 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------------ 149 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC------------
Confidence 9999999642101 11122334577899999999888776543 2358888886544211
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+ .....|+.+|...|.+++.+.. ..+++++.+||+.+++|.. +...+....+ . .-....+|
T Consensus 150 ----~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~d 220 (247)
T PRK09730 150 ----P-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIP---M-QRGGQPEE 220 (247)
T ss_pred ----C-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCC---C-CCCcCHHH
Confidence 1 1113599999999999887532 3589999999999998731 1111111111 1 11237899
Q ss_pred HHHHHHHHHhcC---CCc-eeEccC
Q 005818 575 LLPISVEMAKRN---LSG-IWNFTN 595 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~g-~yn~~~ 595 (676)
++++++.++... ..| .|++.+
T Consensus 221 va~~~~~~~~~~~~~~~g~~~~~~g 245 (247)
T PRK09730 221 VAQAIVWLLSDKASYVTGSFIDLAG 245 (247)
T ss_pred HHHHHHhhcChhhcCccCcEEecCC
Confidence 999999888653 234 565554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-13 Score=134.96 Aligned_cols=227 Identities=15% Similarity=0.058 Sum_probs=148.5
Q ss_pred CCC-CCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHH
Q 005818 1 MAT-VYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFI 76 (676)
Q Consensus 1 ~~~-~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~ 76 (676)
|++ .|++|++|||||++ .||.++++.|+++ +++|++.+|.... ...+.+.... .....+++|++|+++++++
T Consensus 1 ~~~~~~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~~~ 76 (260)
T PRK06603 1 MTTGLLQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSISNL 76 (260)
T ss_pred CCCcccCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHHHH
Confidence 444 46778999999997 8999999999999 6778777765211 1111111110 1234578999999998877
Q ss_pred Hcc-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCC
Q 005818 77 LLT-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 77 ~~~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~ 142 (676)
++. .++|++||+|+.... +.+.+++...++.|+.++..+++++... .+-.++|++||........
T Consensus 77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~- 155 (260)
T PRK06603 77 FDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP- 155 (260)
T ss_pred HHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC-
Confidence 632 369999999987431 2244566788999999999988876421 1125899999965431111
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC
Q 005818 143 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+......-........... .++
T Consensus 156 -------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~--- 217 (260)
T PRK06603 156 -------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAAT--APL--- 217 (260)
T ss_pred -------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhc--CCc---
Confidence 1346999999999999887775 4799999999999765321000011111222111 111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|+++++++++.... .++.+.+.++
T Consensus 218 ----~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 218 ----KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred ----CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 125678999999999986432 4566766655
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6e-13 Score=129.92 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=138.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d~Vi 86 (676)
|+|+||||+|+||+++++.|+++++++.++...|.... .....++.++++|++|.++++++.+. .++|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--------ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999999777888777664321 11235788999999999988776543 3799999
Q ss_pred EccccCCcC----------CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 87 HFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 87 h~a~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
|+||..... ...+.+...+..|+.++..+.+++... ....+++++||.. +.... .+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~---------~~ 141 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD---------NR 141 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc---------CC
Confidence 999986421 111234467889999998888776542 1235899998732 11110 01
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
..+...|+.+|...+.+++.++.+ .++++..+.||.+..+.... + ... .+ ...+..
T Consensus 142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~--~--------~~~--~~-------~~~~~~ 202 (235)
T PRK09009 142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP--F--------QQN--VP-------KGKLFT 202 (235)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc--h--------hhc--cc-------cCCCCC
Confidence 123456999999999999987765 37889999999987765321 0 001 11 112567
Q ss_pred HHHHHHHHHHHHhcC
Q 005818 229 CEDVAEAFDTILHKG 243 (676)
Q Consensus 229 v~D~a~ai~~~~~~~ 243 (676)
.+|++++++.++...
T Consensus 203 ~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 203 PEYVAQCLLGIIANA 217 (235)
T ss_pred HHHHHHHHHHHHHcC
Confidence 899999999999764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-13 Score=135.61 Aligned_cols=226 Identities=15% Similarity=0.066 Sum_probs=149.6
Q ss_pred CCCCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 3 TVYTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 3 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
..|+.+++|||||+ +.||.++++.|+++ +++|++..|.... ...+.+... ......+++|+.|++++++++..
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAE--LGAFVAGHCDVTDEASIDAVFET 81 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHh--cCCceEEecCCCCHHHHHHHHHH
Confidence 35677899999997 89999999999999 6788777664211 111111111 12355789999999998877632
Q ss_pred -----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcC
Q 005818 80 -----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|++||+||.... +.+.+++...+++|+.++..+++++... .+-.++|++||.+......
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p---- 157 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP---- 157 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC----
Confidence 368999999997531 2244566788999999999999877642 1125899999854322111
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.+. |+++.++.||.+..+......-....... ... ..++
T Consensus 158 ----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~-~~~-~~p~------ 219 (272)
T PRK08159 158 ----------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKW-NEY-NAPL------ 219 (272)
T ss_pred ----------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHH-HHh-CCcc------
Confidence 13469999999999998877753 79999999999876422100000011111 111 1111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|++++++.++.... .++.+.+.++.
T Consensus 220 -~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 220 -RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred -cccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence 135678999999999986432 46677777663
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-14 Score=138.42 Aligned_cols=183 Identities=15% Similarity=0.106 Sum_probs=127.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
|+|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 589999999999999999999999754 35678999999888877643 5799999
Q ss_pred CccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHH----HcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 439 AAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCR----ENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 439 ~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+||... .|......++....+++|+.++..+++++. +.+. +++++||...+. +..
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~~~ 142 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------------PYA 142 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------------CCC
Confidence 999641 111222344556778999999777666654 4443 677777754331 123
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc----eeccCCCccchhhHHHHHHHHHh
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK----VVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
+.+.|+.+|...|.+.+.+. ...++++..++|+.+.++...... ..+.. .......++..+|+|++++.++.
T Consensus 143 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~ 221 (248)
T PRK10538 143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR-FKGDDGKAEKTYQNTVALTPEDVSEAVWWVAT 221 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhh-ccCcHHHHHhhccccCCCCHHHHHHHHHHHhc
Confidence 34679999999999988763 345799999999998755311000 00000 00012256789999999999886
Q ss_pred cC
Q 005818 585 RN 586 (676)
Q Consensus 585 ~~ 586 (676)
.+
T Consensus 222 ~~ 223 (248)
T PRK10538 222 LP 223 (248)
T ss_pred CC
Confidence 54
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=134.72 Aligned_cols=216 Identities=17% Similarity=0.150 Sum_probs=144.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... +.+.. .....+++++++|+.|++.+.++++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKL--KRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999999 67888888864211 11100 01123588999999999988776632
Q ss_pred -CCCCEEEEccccCCcC--CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccc-cCCCCCCcCCCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEV-YGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~ 154 (676)
.++|.+||+++..... ...++....++.|+.+...+++.+... .+-.+||++||... ++..
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------------- 144 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS-------------- 144 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC--------------
Confidence 3579999999864321 111334566788999988888776543 11257999998643 2211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
.+...|+.+|...+.+++.++.+. +++++++||++++++.... . . .... .. . + ..++..+|
T Consensus 145 ~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~---~-~~~~---~~--~-~-----~~~~~~~~ 208 (238)
T PRK05786 145 PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-R---N-WKKL---RK--L-G-----DDMAPPED 208 (238)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-h---h-hhhh---cc--c-c-----CCCCCHHH
Confidence 123469999999998888877653 8999999999999874311 0 0 0000 00 0 0 12567799
Q ss_pred HHHHHHHHHhcCC---CCceEEEcCC
Q 005818 232 VAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 232 ~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
++++++.++..+. .+..+.+.++
T Consensus 209 va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 209 FAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred HHHHHHHHhcccccCccCCEEEECCc
Confidence 9999999886432 3455555443
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=135.35 Aligned_cols=222 Identities=16% Similarity=0.090 Sum_probs=149.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT-EK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~ 81 (676)
++.++||||||+|.||+++++.|+++ +++|++.+|....... ..+. .....++.++.+|++|++++.++++. .+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLR-AAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHH-hhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 45689999999999999999999998 6788888886421110 0010 11134688999999999999888754 36
Q ss_pred CCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|++||+|+.... ..+.+++...++.|+.+...+.+++. +.+ -.++|++||.....+
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~-------------- 146 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENP-------------- 146 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCC--------------
Confidence 9999999997542 22344566788999999998888763 222 357999998533211
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH----------HHHHHHHHCCCCceeecCC
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI----------PKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 220 (676)
......|+.+|...+.+++.++.+ .|+++..+.||.+..+... ... ....+..... .+
T Consensus 147 ~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~----- 217 (259)
T PRK06125 147 DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAG--LP----- 217 (259)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhcc--CC-----
Confidence 112345899999999999887654 4899999999998765320 000 0000111111 11
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+...+|++++++.++... ..+..+.+.++.
T Consensus 218 --~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 218 --LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred --cCCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence 113668899999999988643 246667776653
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-14 Score=139.42 Aligned_cols=203 Identities=14% Similarity=0.134 Sum_probs=138.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCC--CHHHHHHHHcc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVA--SADLVHFILLT 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~--d~~~~~~~~~~ 79 (676)
.+..++||||||+|+||.++++.|+++ +++|++++|...... ...+. .....++.++.+|+. +.+++.++++.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIE-AAGGPQPAIIPLDLLTATPQNYQQLADT 85 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHH-hcCCCCceEEEecccCCCHHHHHHHHHH
Confidence 355789999999999999999999998 678888888642110 01111 111235778888886 56555444321
Q ss_pred -----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 80 -----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|+|||+|+.... +...+.+...++.|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 86 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~---- 160 (247)
T PRK08945 86 IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA---- 160 (247)
T ss_pred HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC----
Confidence 369999999987543 22334566788999999999988774 333 68999999965432211
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...|.+++.+++++ ++++++++|+.+-.+... .. ..... +
T Consensus 161 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--~~--------~~~~~------~-- 212 (247)
T PRK08945 161 ----------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--SA--------FPGED------P-- 212 (247)
T ss_pred ----------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--hh--------cCccc------c--
Confidence 13469999999999999877765 688999999988665220 00 00000 0
Q ss_pred eEeeeeHHHHHHHHHHHHhcC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+...+|++++++.++...
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 213 -QKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred -cCCCCHHHHHHHHHHHhCcc
Confidence 13567799999999988543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=135.38 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=145.1
Q ss_pred CCCCeEEEEcC--CchhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGA--AGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.+++||||| ++.||+++++.|+++ +++|++..|..... ..+.+... ......+++|+.|++++++++..
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAE--LDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhc--cCCceEEECCCCCHHHHHHHHHHHH
Confidence 56789999997 679999999999999 67887766542111 11111111 12345789999999998877632
Q ss_pred ---CCCCEEEEccccCCcC---------CcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcC
Q 005818 80 ---EKIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|++||+||..... .+.+++...+++|+.++..+.+++... .+-.++|++||...+....
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~---- 155 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP---- 155 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC----
Confidence 3799999999986421 122344566788999988887765431 1125799999865442211
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.+ +|+++..+.||.+-.+......-........... .++
T Consensus 156 ----------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~------ 217 (261)
T PRK08690 156 ----------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAH--NPL------ 217 (261)
T ss_pred ----------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhc--CCC------
Confidence 1345999999999988877654 4899999999999765321000011111122111 111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+...+|+|.+++.++.... .++.+.+.+|.
T Consensus 218 -~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 218 -RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred -CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 136678999999999997432 45667666553
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=137.07 Aligned_cols=223 Identities=17% Similarity=0.088 Sum_probs=146.6
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCcccc----ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCSN----LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
++.++++||||+ +.||.++++.|+++ +++|++..+...... ...+.. ....+..+++|++|++++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTE--PLNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHh--ccCcceEeecCcCCHHHHHHHHH
Confidence 456899999986 79999999999999 677766654321111 111111 11246788999999999887763
Q ss_pred c-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCc
Q 005818 79 T-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
. .++|++||+||.... +.+.+++...++.|+.++..+.+++... ..-.++|++||.......
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---- 155 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI---- 155 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC----
Confidence 3 369999999997531 2234456788899999999988876531 112589999996433111
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.....|+.+|...+.+.+.++.++ |+++..+.||.+-.+......-.+.......... ++
T Consensus 156 ----------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~----- 218 (258)
T PRK07370 156 ----------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA--PL----- 218 (258)
T ss_pred ----------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcC--Cc-----
Confidence 123469999999999999887764 7999999999997653210000011111111111 11
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|++.++..++.... .++.+.+.++
T Consensus 219 --~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 219 --RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred --CcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 135677999999999986432 4566666554
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.3e-14 Score=124.83 Aligned_cols=283 Identities=15% Similarity=0.055 Sum_probs=181.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHH-----HHHHcC--CCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHH
Q 005818 4 VYTPKNILITGAAGFIASHVCN-----RLIGNY--PEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFI 76 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~-----~L~~~g--~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~ 76 (676)
+-+.++.++-+++|+|+..|.. ++-+.+ ..+.|++++|.+... ++++-+.|..-..
T Consensus 9 ~~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~------------ritw~el~~~Gip----- 71 (315)
T KOG3019|consen 9 SGKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA------------RITWPELDFPGIP----- 71 (315)
T ss_pred CCccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc------------ccccchhcCCCCc-----
Confidence 3445678888999999988877 333332 137888888875322 2222211111100
Q ss_pred HccCCCCEEEEccccCC----cCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEecccccCCCCCCcCCCCCCC
Q 005818 77 LLTEKIDTIMHFAAQTH----VDNSFGNSFEFTKNNIYGTHVLLEACKITGQI-KRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 77 ~~~~~~d~Vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
..|+.++++++... ...+++-..++...-+..+..|.++..++.+. +.+|.+|..++|-++..... +|+
T Consensus 72 ---~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY---~e~ 145 (315)
T KOG3019|consen 72 ---ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEY---SEK 145 (315)
T ss_pred ---eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccc---ccc
Confidence 13444444444322 22222222234444455678888998887654 47999999999988775543 566
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHH--CCCCceeecCCCceEeeeeH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM--KGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v 229 (676)
++....+....--+..|..++.-. ...+.+++|.|.|.|.+.. .+..++.-.. .|.+ .|+|.|+++|||+
T Consensus 146 ~~~qgfd~~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gGG---a~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv 217 (315)
T KOG3019|consen 146 IVHQGFDILSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGGG---ALAMMILPFQMGAGGP---LGSGQQWFPWIHV 217 (315)
T ss_pred cccCChHHHHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCCc---chhhhhhhhhhccCCc---CCCCCeeeeeeeh
Confidence 666655655555555566555422 2589999999999999873 3333333333 3443 3889999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeee-cCCCC--CCccccc-----CHHHHHhC
Q 005818 230 EDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFV-ENRPF--NDQRYFL-----DVQKLKQL 301 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~--~~~~~~~-----~~~k~~~l 301 (676)
+|++..|..+++++...++.|-..+++.+..|+.+.+.++++++.-+.++.+ -..-+ .....++ -..|+.++
T Consensus 218 ~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~ 297 (315)
T KOG3019|consen 218 DDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALEL 297 (315)
T ss_pred HHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhc
Confidence 9999999999999888889999999999999999999999988642221110 00001 1122223 34566789
Q ss_pred CCcccC-CHHHHHHHHH
Q 005818 302 GWYERV-TWEEGLQKTM 317 (676)
Q Consensus 302 g~~~~~-~~~~~l~~~~ 317 (676)
||+.++ .+.+++++++
T Consensus 298 Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 298 GFEFKYPYVKDALRAIM 314 (315)
T ss_pred CceeechHHHHHHHHHh
Confidence 999988 5777777654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=139.57 Aligned_cols=190 Identities=15% Similarity=0.095 Sum_probs=136.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++++||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.+ ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 129 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL 129 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999865 24668999998888776654 57
Q ss_pred CEEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 434 THVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 434 d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|++||+||... .+......++....+++|+.++..+++++... +.++|++||...+..
T Consensus 130 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~----------------- 192 (294)
T PRK07985 130 DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP----------------- 192 (294)
T ss_pred CEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC-----------------
Confidence 99999998531 11112234556788999999999999998753 457888888766521
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
......|+.+|...+.+++.+.. ..++++..++|+.+++|.. ....+.. ... ...+...+|++.
T Consensus 193 -~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~---~~~-~~r~~~pedva~ 267 (294)
T PRK07985 193 -SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQ---QTP-MKRAGQPAELAP 267 (294)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhc---cCC-CCCCCCHHHHHH
Confidence 12235699999999999988743 3589999999999998731 1111111 111 123567899999
Q ss_pred HHHHHHhcCC---Cc-eeEccCC
Q 005818 578 ISVEMAKRNL---SG-IWNFTNP 596 (676)
Q Consensus 578 ~~~~~~~~~~---~g-~yn~~~~ 596 (676)
+++.++.... .| ++.+.++
T Consensus 268 ~~~fL~s~~~~~itG~~i~vdgG 290 (294)
T PRK07985 268 VYVYLASQESSYVTAEVHGVCGG 290 (294)
T ss_pred HHHhhhChhcCCccccEEeeCCC
Confidence 9999886532 23 6666654
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=135.96 Aligned_cols=190 Identities=14% Similarity=0.101 Sum_probs=132.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||++++++|+++|++| ..+.+|+.+.+.+.++++.. ++|
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD 85 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999865 24557999999888877643 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||...... .....+..+..+.+|+.++.++++++... + .+++++||...+.+
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~----------------- 148 (248)
T PRK05557 86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMG----------------- 148 (248)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcC-----------------
Confidence 9999999652111 11123345567889999999999988753 3 35777777633311
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
......|+.+|...|.+++.+. +..++++..++|+.+..+. .+........ ....+.+++|+++++
T Consensus 149 -~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~ 223 (248)
T PRK05557 149 -NPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI----PLGRLGQPEEIASAV 223 (248)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 1224679999999998887753 2458999999998876442 1222221111 123567899999999
Q ss_pred HHHHhcC---CC-ceeEccCC
Q 005818 580 VEMAKRN---LS-GIWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~-g~yn~~~~ 596 (676)
..++... .. ..|++.++
T Consensus 224 ~~l~~~~~~~~~g~~~~i~~~ 244 (248)
T PRK05557 224 AFLASDEAAYITGQTLHVNGG 244 (248)
T ss_pred HHHcCcccCCccccEEEecCC
Confidence 8887652 23 48888765
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=136.33 Aligned_cols=197 Identities=14% Similarity=0.154 Sum_probs=135.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------------eeccccCCChHHHHHHhhcc----
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
.++++||||+|+||.++++.|+++|++| .++++|++|++++.++++.+
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 3689999999999999999999999763 24568999999998887754
Q ss_pred -CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 432 -KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 432 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
++|+|||+||.... +......++.+..+++|+.++..+++++... +.++++++|+.+...
T Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~--------------- 152 (257)
T PRK12744 88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF--------------- 152 (257)
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc---------------
Confidence 67999999996421 1122233455678899999999999998753 245666644432210
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH----HHHHHhcC--c-eeccC-CCccchhhH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF----ITKISRYN--K-VVNIP-NSMTILDEL 575 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~----~~~~~~~~--~-~~~~~-~~~~~v~D~ 575 (676)
....+.|+.||...|.+++.+.+ ..++++..++|+.+..+... ........ . ..... ..+.+.+|+
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 229 (257)
T PRK12744 153 ---TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDI 229 (257)
T ss_pred ---CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHH
Confidence 01236799999999999988743 34799999999998765210 00000000 0 00111 146789999
Q ss_pred HHHHHHHHhcC--C-CceeEccCCCc
Q 005818 576 LPISVEMAKRN--L-SGIWNFTNPGV 598 (676)
Q Consensus 576 a~~~~~~~~~~--~-~g~yn~~~~~~ 598 (676)
+.++..+++.. . +.++++.++..
T Consensus 230 a~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 230 VPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred HHHHHHhhcccceeecceEeecCCcc
Confidence 99999998753 1 34788777643
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=132.90 Aligned_cols=190 Identities=15% Similarity=0.068 Sum_probs=137.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc---cCCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL---TEKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~---~~~~d 83 (676)
|++++||||+|+||+++++.|+++ +++|++++|..... +.+. ..+++++.+|++|.+.+.+++. ..++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~--~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAAL--AALQ----ALGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHH--HHHH----hccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 468999999999999999999998 67888888764211 1111 1246789999999999888642 23699
Q ss_pred EEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecc-cccCCCCCCcCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTD-EVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 84 ~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~-~vyg~~~~~~~~~~~e~~~~ 154 (676)
+|||+++.... ..+.+++...++.|+.++.++++++... ..-.++|++||. +.++....
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------ 140 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG------------ 140 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC------------
Confidence 99999998632 1244566789999999999999888642 112478999884 44443211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
.+...|+.+|...+.+++.++.++ +++++.++||.+..+... . ...+..++.+
T Consensus 141 ~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~-----------~~~~~~~~~~ 194 (222)
T PRK06953 141 TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------A-----------QAALDPAQSV 194 (222)
T ss_pred CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------C-----------CCCCCHHHHH
Confidence 112359999999999999887765 789999999998766421 0 0135668888
Q ss_pred HHHHHHHhc
Q 005818 234 EAFDTILHK 242 (676)
Q Consensus 234 ~ai~~~~~~ 242 (676)
+.+..+++.
T Consensus 195 ~~~~~~~~~ 203 (222)
T PRK06953 195 AGMRRVIAQ 203 (222)
T ss_pred HHHHHHHHh
Confidence 888887754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-14 Score=142.72 Aligned_cols=165 Identities=13% Similarity=0.055 Sum_probs=115.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 85 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLD 85 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence 4689999999999999999999999754 35678999999988887652 479
Q ss_pred EEEECccccCCC--CcchhccchhhHHhhhhhhHHHHHHHHHHc----C---CcEEEeecCeeeecCC--C--CCCCCC-
Q 005818 435 HVFNAAGVTGRP--NVDWCETHKPETIRTNVVGTLTLADVCREN----G---LLMMNYATGCIFEYDA--K--HPEGTG- 500 (676)
Q Consensus 435 ~Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~---~~~v~~sS~~v~~~~~--~--~~~~~~- 500 (676)
+|||+||..... ......++.+..+++|+.|+.++++++... + .++|++||...+.... . .+....
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~ 165 (322)
T PRK07453 86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL 165 (322)
T ss_pred EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence 999999965210 112234556788999999999998887652 2 3788888876543210 0 000000
Q ss_pred -----------CCc-cccCCCCCCCCchhhhHHHHHHHHHHccCe----EEEEeeecccCCCCC
Q 005818 501 -----------IGF-KEEDKPNFTGSFYSKTKAMVEELLKEYDNV----CTLRVRMPISSDLNN 548 (676)
Q Consensus 501 -----------~~~-~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~~~r~~~~~g 548 (676)
.++ ..+..+..|.+.|+.||++.+.+++.+.+. .++++..++|+.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 166 GDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred hhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 000 001123456688999999988877776433 479999999999874
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=135.65 Aligned_cols=191 Identities=15% Similarity=0.110 Sum_probs=134.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+++|+||||+|+||.+++++|+++|++| ..+.+|+++.+++.++++.. ++|+|
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l 84 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDIL 84 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999754 46678999999988777643 58999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+||...... .+....+.+..+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------------ 146 (248)
T TIGR01832 85 VNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG------------------ 146 (248)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC------------------
Confidence 99999752111 1112344567789999999999998854 22 47788888765531
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-H------HHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-I------TKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-~------~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
......|+.+|...+.+++.+.+ ..++++..++|+.+..+... + ...... .. ..+.++..+|+|+++
T Consensus 147 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~dva~~~ 223 (248)
T TIGR01832 147 GIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE--RI-PAGRWGTPDDIGGPA 223 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh--cC-CCCCCcCHHHHHHHH
Confidence 11234699999999999988743 35899999999998765310 0 000000 11 123688899999999
Q ss_pred HHHHhcC---CCceeEccC
Q 005818 580 VEMAKRN---LSGIWNFTN 595 (676)
Q Consensus 580 ~~~~~~~---~~g~yn~~~ 595 (676)
+.++... ..|.+...+
T Consensus 224 ~~l~s~~~~~~~G~~i~~d 242 (248)
T TIGR01832 224 VFLASSASDYVNGYTLAVD 242 (248)
T ss_pred HHHcCccccCcCCcEEEeC
Confidence 9988643 235444444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-12 Score=113.17 Aligned_cols=208 Identities=16% Similarity=0.155 Sum_probs=149.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||.|+||||.+|+.+++..+++ |++|+++.|+... ....+++..++.|+.|++++.+.+ .+.|+||.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K--------~~~~~~~~i~q~Difd~~~~a~~l--~g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASK--------LAARQGVTILQKDIFDLTSLASDL--AGHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHh--------ccccccceeecccccChhhhHhhh--cCCceEEE
Confidence 68999999999999999999999 6788888886421 112267889999999999998888 89999998
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
.-+....+ .. .........|++..+..+ +.|++.++.++-.--.++.. -.++|.-|...|..++..+
T Consensus 69 A~~~~~~~-----~~---~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~r----LvD~p~fP~ey~~~A~~~a 135 (211)
T COG2910 69 AFGAGASD-----ND---ELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTR----LVDTPDFPAEYKPEALAQA 135 (211)
T ss_pred eccCCCCC-----hh---HHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCce----eecCCCCchhHHHHHHHHH
Confidence 87654321 11 122334677888888877 89999988855433222221 3456666777788888888
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~ 246 (676)
|.+- .++...+++|+.+-|...|-|+....++- +.+..+.....|. ++|...|.|-+++..++++. .+
T Consensus 136 e~L~-~Lr~~~~l~WTfvSPaa~f~PGerTg~yr-------lggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 136 EFLD-SLRAEKSLDWTFVSPAAFFEPGERTGNYR-------LGGDQLLVNAKGE---SRISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred HHHH-HHhhccCcceEEeCcHHhcCCccccCceE-------eccceEEEcCCCc---eeeeHHHHHHHHHHHHhcccccc
Confidence 8443 35555679999999999999987655441 1233333322332 78999999999999999876 45
Q ss_pred ceEEE
Q 005818 247 HVYNI 251 (676)
Q Consensus 247 ~~y~i 251 (676)
+.|-+
T Consensus 205 qRftv 209 (211)
T COG2910 205 QRFTV 209 (211)
T ss_pred eeeee
Confidence 55544
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.9e-14 Score=142.97 Aligned_cols=219 Identities=16% Similarity=0.181 Sum_probs=147.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC------------------------------------------ceeeccccCCC--
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI------------------------------------------PFEYGKGRLEN-- 420 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~------------------------------------------~v~~~~~Dl~d-- 420 (676)
+.|+|||||||+|..|++.|++.-- ++..+.||+++
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~ 92 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD 92 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence 5799999999999999999998652 34678889884
Q ss_pred ----hHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCC
Q 005818 421 ----RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAK 494 (676)
Q Consensus 421 ----~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~ 494 (676)
+.++..+.+.+ |+|||+||.+ .. .+.......+|+.||.++++.|++.- . -++|+||..+-.....
T Consensus 93 LGis~~D~~~l~~eV--~ivih~AAtv-----rF-de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~ 164 (467)
T KOG1221|consen 93 LGISESDLRTLADEV--NIVIHSAATV-----RF-DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH 164 (467)
T ss_pred cCCChHHHHHHHhcC--CEEEEeeeee-----cc-chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence 35555455555 9999999954 22 23345678999999999999999975 3 5788888866532211
Q ss_pred C-----CCCCCCCcc---------ccC-----CC---CCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--
Q 005818 495 H-----PEGTGIGFK---------EED-----KP---NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-- 550 (676)
Q Consensus 495 ~-----~~~~~~~~~---------~e~-----~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-- 550 (676)
. |.+...+.. +++ .+ ....+.|.-+|..+|+++.... .+++++++||+-+....
T Consensus 165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKE 242 (467)
T ss_pred ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccC
Confidence 1 100000000 000 00 0123789999999999998864 57999999998887542
Q ss_pred ---HHHHHH----------HhcCceec-----cCCCccchhhHHHHHHHHHhcC--C-----CceeEccCC--CcccHHH
Q 005818 551 ---NFITKI----------SRYNKVVN-----IPNSMTILDELLPISVEMAKRN--L-----SGIWNFTNP--GVVSHNE 603 (676)
Q Consensus 551 ---~~~~~~----------~~~~~~~~-----~~~~~~~v~D~a~~~~~~~~~~--~-----~g~yn~~~~--~~~s~~e 603 (676)
.++..+ .+|.-..- ...+++.||.|+.+++.+.-.. . .-+||++++ +++++.+
T Consensus 243 P~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~ 322 (467)
T KOG1221|consen 243 PFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGD 322 (467)
T ss_pred CCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHH
Confidence 122211 11111111 1118889999999998766321 1 239999996 6789999
Q ss_pred HHHHHHhhcC
Q 005818 604 ILEMYKAYID 613 (676)
Q Consensus 604 ~~~~i~~~~g 613 (676)
+.+...+..-
T Consensus 323 ~~e~~~~~~~ 332 (467)
T KOG1221|consen 323 FIELALRYFE 332 (467)
T ss_pred HHHHHHHhcc
Confidence 9999888764
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=134.64 Aligned_cols=179 Identities=16% Similarity=0.080 Sum_probs=131.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc--CCCEEEECccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV--KPTHVFNAAGV 442 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~--~~d~Vih~a~~ 442 (676)
++++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. .+|.+||+||.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 579999999999999999999999754 45679999999999988874 47999999985
Q ss_pred cCCCCcc---hhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 443 TGRPNVD---WCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 443 ~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
.. ..+ ...++.+..+++|+.++.++++++... +.+++++||..... +......|
T Consensus 82 ~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------------~~~~~~~Y 141 (240)
T PRK06101 82 CE--YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------------ALPRAEAY 141 (240)
T ss_pred cc--cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------------CCCCCchh
Confidence 31 111 122334567999999999999998763 55778887754221 11233579
Q ss_pred hhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCcee
Q 005818 517 SKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIW 591 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~y 591 (676)
+.+|...+.+.+.+. +..++++..++|+.++++.. . ... .. ....+..+|+++.++..++.....+|
T Consensus 142 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~--~----~~~-~~-~~~~~~~~~~a~~i~~~i~~~~~~~~ 211 (240)
T PRK06101 142 GASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLT--D----KNT-FA-MPMIITVEQASQEIRAQLARGKSHIY 211 (240)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCc--C----CCC-CC-CCcccCHHHHHHHHHHHHhcCCCEEE
Confidence 999999999988763 35689999999999987621 0 000 00 11245789999999999987655444
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.3e-13 Score=132.64 Aligned_cols=223 Identities=16% Similarity=0.087 Sum_probs=146.1
Q ss_pred CCCCeEEEEcC--CchhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGA--AGFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.++|||||| ++.||.++++.|+++ +++|++.+|.... ...+.+... ......+++|++|++++.++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAE--FGSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHh--cCCcceeeccCCCHHHHHHHHHHHH
Confidence 56789999996 679999999999999 6778776553211 111111111 11234688999999998877742
Q ss_pred ---CCCCEEEEccccCCc---------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+||.... ..+.+++...+++|+.++..+.+++... .+-.++|++||....-..
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~------ 153 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV------ 153 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC------
Confidence 469999999997532 1233456678899999999988776542 112589999986542111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+......-.....+..... .++
T Consensus 154 --------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~------- 216 (260)
T PRK06997 154 --------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--APL------- 216 (260)
T ss_pred --------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Ccc-------
Confidence 11345999999999999988775 4799999999998764321000001111111111 111
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+...+|+++++..++.... .++++.+.++
T Consensus 217 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 217 RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred cccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 135678999999999986432 4566766655
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-13 Score=133.04 Aligned_cols=223 Identities=14% Similarity=0.030 Sum_probs=147.2
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.+++|||||+ +.||.++++.|+++ +++|++.+|..... ..+.+... ...+..+++|++|++++.++++.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHHHHHHHHH
Confidence 456899999998 59999999999999 67888877753211 01111111 12346789999999998877632
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++... ..-.++|++||.......
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~------- 156 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV------- 156 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC-------
Confidence 368999999987532 2244566788999999999999876532 112479999985432111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+............+..... .+. .
T Consensus 157 -------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~ 220 (258)
T PRK07533 157 -------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAER--APL-------R 220 (258)
T ss_pred -------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhc--CCc-------C
Confidence 11346999999999999887765 4799999999998765321100011222222221 111 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
.+...+|++.+++.++... -.++.+.+.++
T Consensus 221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred CCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 3567899999999988642 24566666544
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=135.98 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=127.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
+|+|+||||+|+||.+++++|+++|++| .++.+|++|++++.++++.+ ++|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 3689999999999999999999998643 46779999999988877653 4799
Q ss_pred EEECccccCCCCcc--hhccchhhHHhhhhhhHHHHHHH----HHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGRPNVD--WCETHKPETIRTNVVGTLTLADV----CRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a----~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||....+... ...++....+++|+.|+.+++++ +++.+ .++|++||...+.+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~----------------- 144 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG----------------- 144 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------------
Confidence 99999965211111 12244567899999999998774 34444 46788888654421
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccC-CCccchhhHHHHHHHHHh
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIP-NSMTILDELLPISVEMAK 584 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~D~a~~~~~~~~ 584 (676)
......|+.||...+.+.+.+. +..++++..++|+.+.++... ... +. ..++..+++++.++.++.
T Consensus 145 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------~~~---~~~~~~~~~~~~a~~~~~~l~ 214 (257)
T PRK07024 145 -LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA------HNP---YPMPFLMDADRFAARAARAIA 214 (257)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh------cCC---CCCCCccCHHHHHHHHHHHHh
Confidence 1223569999999999987763 457899999999999876311 000 11 123568999999999887
Q ss_pred cC
Q 005818 585 RN 586 (676)
Q Consensus 585 ~~ 586 (676)
+.
T Consensus 215 ~~ 216 (257)
T PRK07024 215 RG 216 (257)
T ss_pred CC
Confidence 64
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-13 Score=135.66 Aligned_cols=173 Identities=15% Similarity=0.081 Sum_probs=126.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-ce-----------------eeccccCCChHHHHHHhhcc-CCCEEEECccccCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI-PF-----------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVTGR 445 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~-~v-----------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~~ 445 (676)
++|+||||+|+||++++++|+++|+ +| .++.+|+.|++++.++++.. ++|+|||+||....
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 86 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRT 86 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 5899999999999999999999998 54 45678999999999888764 46999999997311
Q ss_pred CC--cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 446 PN--VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 446 ~~--~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
+. .....++....+++|+.++.++++++.. .+ .+++++||...+. +..+...|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------------~~~~~~~y~~ 148 (238)
T PRK08264 87 GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------------NFPNLGTYSA 148 (238)
T ss_pred CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------------CCCCchHhHH
Confidence 11 1122345567789999999999998753 33 3577777766542 1233467999
Q ss_pred hHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 519 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 519 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
+|...|.+.+.+.. ..++++..++|+.+..+.. .. .....+..+|+++.++..+...
T Consensus 149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~------~~-----~~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA------AG-----LDAPKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc------cc-----CCcCCCCHHHHHHHHHHHHhCC
Confidence 99999999887642 3589999999999876520 00 0112566788888888877653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=135.95 Aligned_cols=185 Identities=18% Similarity=0.143 Sum_probs=125.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
|++|+||||+|+||..+++.|+++|++| .++.+|++|++++.++++.. ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999754 35668999998888777643 57
Q ss_pred CEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 434 THVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 434 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
|+|||+||.... +..+...++....+.+|+.++..+++++.+. +.++|++||...+.+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------- 150 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS----------- 150 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-----------
Confidence 999999996421 0111223344567899999999887654432 2357888876544211
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH----HHHHHHhcCceeccCCCccchhhHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
+ .....|+.||...+.+++.+.+ ..++++..++|+.+..|.. ............. ..-+..++|++
T Consensus 151 -----~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~va 223 (248)
T PRK06947 151 -----P-NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTP-LGRAGEADEVA 223 (248)
T ss_pred -----C-CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCC-CCCCcCHHHHH
Confidence 0 1124699999999999887643 3479999999999986621 0000000000111 11245689999
Q ss_pred HHHHHHHhcC
Q 005818 577 PISVEMAKRN 586 (676)
Q Consensus 577 ~~~~~~~~~~ 586 (676)
+.++.++..+
T Consensus 224 ~~~~~l~~~~ 233 (248)
T PRK06947 224 ETIVWLLSDA 233 (248)
T ss_pred HHHHHHcCcc
Confidence 9999988765
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=135.37 Aligned_cols=193 Identities=12% Similarity=0.109 Sum_probs=133.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||.+++++|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRID 82 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999754 45668999999888777653 579
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||..... ..+...++....+.+|+.++..+++++... +.++|++||....
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------------ 144 (256)
T PRK12743 83 VLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------------------ 144 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc------------------
Confidence 999999965210 011223455677899999999999987653 2467888775321
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-H-HHHHh-cCceeccCCCccchhhHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-I-TKISR-YNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-~-~~~~~-~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
.+..+...|+.+|...+.+++.+.. ..++++..++|+.++.+..- . ..... ....... ..+...+|++.++..
T Consensus 145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ 223 (256)
T PRK12743 145 TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPL-GRPGDTHEIASLVAW 223 (256)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence 1233446799999999999887642 45799999999999876311 0 00000 0011111 235678999999988
Q ss_pred HHhcC---CCc-eeEccCC
Q 005818 582 MAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 582 ~~~~~---~~g-~yn~~~~ 596 (676)
++... ..| ++.+.++
T Consensus 224 l~~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 224 LCSEGASYTTGQSLIVDGG 242 (256)
T ss_pred HhCccccCcCCcEEEECCC
Confidence 88653 235 5555544
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-13 Score=134.58 Aligned_cols=199 Identities=12% Similarity=0.076 Sum_probs=135.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-----CCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~ 443 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|++.+.++++.. ++|+|||+||..
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGS 88 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 4689999999999999999999999865 46778999999888766543 579999999953
Q ss_pred CCC---CcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 444 GRP---NVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 444 ~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
..+ ......++.+..+++|+.++..+++++. +.+ .++|++||...+.. ...+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----------------~~~~~~~ 151 (260)
T PRK06523 89 SAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP-----------------LPESTTA 151 (260)
T ss_pred ccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------------CCCCcch
Confidence 100 0112334556778999999988876653 333 36788887654311 0123467
Q ss_pred hhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcC---------------ceeccCCCccchhhH
Q 005818 516 YSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYN---------------KVVNIPNSMTILDEL 575 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~---------------~~~~~~~~~~~v~D~ 575 (676)
|+.+|...|.+++.+.+ ..++++..++|+.+..+. .+........ .... ...+...+|+
T Consensus 152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~v 230 (260)
T PRK06523 152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-LGRPAEPEEV 230 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-cCCCCCHHHH
Confidence 99999999999888642 357999999999998773 1211111000 0001 1235568899
Q ss_pred HHHHHHHHhcC---C-CceeEccCCCccc
Q 005818 576 LPISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 576 a~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
++++..++... . +..+++.++...|
T Consensus 231 a~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 231 AELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHHHHhCcccccccCceEEecCCccCC
Confidence 99999888643 2 2477777765443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=139.23 Aligned_cols=183 Identities=15% Similarity=0.124 Sum_probs=125.7
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCC-cEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPE-YKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++|||||++.||.++++.|+++ + ++|++.+|...... .+.+ ......+..+.+|++|.+++.++++.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSL--GMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHh--cCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999999 5 78888887542211 0111 11234678899999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cC-CCceEEEEecccccCCCCCC----
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TG-QIKRFIHVSTDEVYGETDED---- 143 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~~v~~SS~~vyg~~~~~---- 143 (676)
.++|++||+||.... ..+.+++...+++|+.++..+.+++.. .+ ...++|++||...+......
T Consensus 78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~ 157 (314)
T TIGR01289 78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP 157 (314)
T ss_pred hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC
Confidence 369999999997532 123345567889999998888665432 21 13599999997765421100
Q ss_pred c-CCC--------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccC
Q 005818 144 A-VVG--------------NHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYG 192 (676)
Q Consensus 144 ~-~~~--------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G 192 (676)
. ... ..+..+..+...|+.||+....+.++++++ .|+.++.++||.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 158 KANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred cccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 0 000 011122334567999999988888877664 379999999999953
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-12 Score=126.52 Aligned_cols=188 Identities=15% Similarity=0.093 Sum_probs=125.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++++++||||+|+||+++++.|+++ +++|++++|...... .. . .......+.+|++|.+++.+.+ .++|+
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~-~~---~-~~~~~~~~~~D~~~~~~~~~~~--~~iDi 82 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNS-ES---N-DESPNEWIKWECGKEESLDKQL--ASLDV 82 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhh-hh---h-ccCCCeEEEeeCCCHHHHHHhc--CCCCE
Confidence 55689999999999999999999999 678888887641111 00 0 0112357889999999998877 67999
Q ss_pred EEEccccCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHcC------CCceEEEEecccccCCCCCCcCCCCCCCCCCCCC
Q 005818 85 IMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKITG------QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 157 (676)
Q Consensus 85 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~------~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 157 (676)
+||+||.... ..+.+++...+++|+.++.++++++...- .-..++..||.+.+... ..
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~---------------~~ 147 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA---------------LS 147 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC---------------CC
Confidence 9999997532 23345677889999999999998875420 11234444553322111 12
Q ss_pred ChhHHHHHHHHHHHHHHHH-------HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 158 NPYSATKAGAEMLVMAYGR-------SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~-------~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
..|+.||...+.+. .+++ ..++.+..+.||.+..+.. + ...+..+
T Consensus 148 ~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-----------------~----------~~~~~~~ 199 (245)
T PRK12367 148 PSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELN-----------------P----------IGIMSAD 199 (245)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccC-----------------c----------cCCCCHH
Confidence 45999999986443 2222 2467777777766432210 0 0146779
Q ss_pred HHHHHHHHHHhcCC
Q 005818 231 DVAEAFDTILHKGE 244 (676)
Q Consensus 231 D~a~ai~~~~~~~~ 244 (676)
|+|+.++.++++..
T Consensus 200 ~vA~~i~~~~~~~~ 213 (245)
T PRK12367 200 FVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999987654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-13 Score=133.57 Aligned_cols=191 Identities=10% Similarity=0.054 Sum_probs=135.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||++|++.|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 86 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD 86 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999754 45678999999988887653 679
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||...... .....++.+..+..|+.++.++++++... +.++|++||...+..
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 149 (250)
T PRK12939 87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG----------------- 149 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC-----------------
Confidence 9999999652101 11123344566889999999999988643 236788887654421
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
......|+.+|...|.+++.+. ...++++..++|+.+..+. .+........ ....+++++|++++
T Consensus 150 -~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~ 224 (250)
T PRK12939 150 -APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGR----ALERLQVPDDVAGA 224 (250)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcC----CCCCCCCHHHHHHH
Confidence 1223569999999999998763 2357999999999887653 1222222111 12357889999999
Q ss_pred HHHHHhcC---CC-ceeEccCC
Q 005818 579 SVEMAKRN---LS-GIWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~-g~yn~~~~ 596 (676)
++.++..+ .. ..+++.++
T Consensus 225 ~~~l~~~~~~~~~G~~i~~~gg 246 (250)
T PRK12939 225 VLFLLSDAARFVTGQLLPVNGG 246 (250)
T ss_pred HHHHhCccccCccCcEEEECCC
Confidence 99998754 23 36666665
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-13 Score=134.81 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=137.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||.++++.|+++|+++ .++.+|++|.+++.++++.. ++|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999754 35678999999888876653 679
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+|||+||.......+...++.+..+++|+.++.++++++.. .+ .++|++||..... +
T Consensus 91 ~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~ 152 (255)
T PRK06113 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------K 152 (255)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC------------------C
Confidence 99999996521122223345566789999999999999863 22 4788888865331 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.+|...+.+++.+. ...++++..+.|+.+..+. .+........ . ...+...+|+++++
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~d~a~~~ 228 (255)
T PRK06113 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT---P-IRRLGQPQDIANAA 228 (255)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcC---C-CCCCcCHHHHHHHH
Confidence 2234679999999999998864 3457999999998876442 1111111111 1 12356889999999
Q ss_pred HHHHhcC---CCc-eeEccCCCc
Q 005818 580 VEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~~~ 598 (676)
+.++... .+| ++++.++..
T Consensus 229 ~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 229 LFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHcCccccCccCCEEEECCCcc
Confidence 9998653 134 777777643
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-13 Score=132.69 Aligned_cols=190 Identities=16% Similarity=0.168 Sum_probs=132.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++++||||+|+||+++++.|+++|+++ .++.+|++|++++.++++.+ ++|
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRID 85 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999754 35678999999998888754 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|||+||...... .....++.+..+++|+.++.++++++.+. +.+++++||..... +.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~ 147 (245)
T PRK12937 86 VLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL------------------PL 147 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC------------------CC
Confidence 9999999652111 11223445577899999999999888654 23677777654321 12
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
++.+.|+.+|...|.+++.+. ...++++..++|+.+..+. ..+..+.+..+ ...+..++|++++++
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~~ 223 (245)
T PRK12937 148 PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP----LERLGTPEEIAAAVA 223 (245)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC----CCCCCCHHHHHHHHH
Confidence 334679999999999998763 2357899999998765442 12222221111 123557899999999
Q ss_pred HHHhcC---CCc-eeEccCC
Q 005818 581 EMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 581 ~~~~~~---~~g-~yn~~~~ 596 (676)
.++..+ ..| .+++.++
T Consensus 224 ~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 224 FLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHcCccccCccccEEEeCCC
Confidence 888653 223 6666543
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.9e-13 Score=123.80 Aligned_cols=185 Identities=17% Similarity=0.096 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
|.++|||||+.||.++++.|.+.|++| .....|++|+++++++++.. ++|++|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv 86 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV 86 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEE
Confidence 579999999999999999999999854 56678999999977766533 689999
Q ss_pred ECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH-----HcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR-----ENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~-----~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|.||.... |-.....++...++++|+.|.++...+.. +.+.++|.+||...- .+.+
T Consensus 87 NNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~------------------~~y~ 148 (246)
T COG4221 87 NNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR------------------YPYP 148 (246)
T ss_pred ecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc------------------ccCC
Confidence 99996521 11122235566889999999999988763 234588999887422 1224
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-HHHHHHHhcCc--eeccCCCccchhhHHHHHHHHHhc
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-NFITKISRYNK--VVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~--~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
..+.|+.+|+..-.+...+.+ ..++|++.+-|+.+-... ..+..--.... .......++..+|+|+++.+++++
T Consensus 149 ~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~ 228 (246)
T COG4221 149 GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQ 228 (246)
T ss_pred CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence 457899999999998877632 358999999998874221 00000000000 112334688899999999999998
Q ss_pred CC
Q 005818 586 NL 587 (676)
Q Consensus 586 ~~ 587 (676)
|.
T Consensus 229 P~ 230 (246)
T COG4221 229 PQ 230 (246)
T ss_pred CC
Confidence 74
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.4e-14 Score=155.24 Aligned_cols=174 Identities=16% Similarity=0.092 Sum_probs=128.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+..+++|||||+|+||++++++|+++ +++|++.+|+................++.++.+|++|++++.++++.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 67888888864221100000011234688999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.|+.++++++.. .+.-.+||++||.+.|....+
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 461 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS--------- 461 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC---------
Confidence 2689999999986532 23445667889999999998887542 221258999999888765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 194 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~ 194 (676)
...|+.+|...+.+++.++.+ +|++++++.||.|-.+.
T Consensus 462 -----~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 462 -----LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 356999999999888877654 48999999999986653
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.2e-13 Score=133.63 Aligned_cols=195 Identities=16% Similarity=0.130 Sum_probs=132.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 445 (676)
+++++||||+|+||.+++++|+++|++| .++.+|++|+++++++++.+ ++|+|||+||....
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~ 85 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESY 85 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 3689999999999999999999999865 46789999999988887754 57999999996421
Q ss_pred -CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 446 -PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 446 -~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
+......++....+++|+.++..+++++... +.++|++||...+. +..+...|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~s 147 (258)
T PRK06398 86 GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA------------------VTRNAAAYVTS 147 (258)
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc------------------CCCCCchhhhh
Confidence 1111122334566899999999998887542 25788888865442 22344779999
Q ss_pred HHHHHHHHHHccCeE--EEEeeecccCCCCChHHH-HHHHHhcC------------ceeccCCCccchhhHHHHHHHHHh
Q 005818 520 KAMVEELLKEYDNVC--TLRVRMPISSDLNNPRNF-ITKISRYN------------KVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 520 K~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~-~~~~~~~~------------~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
|...+.+.+.+...+ .+++..+.|+.+..+... ......+. ........+...+|++++++.++.
T Consensus 148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s 227 (258)
T PRK06398 148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLAS 227 (258)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcC
Confidence 999999998863221 388999999988655210 00000000 000011245678999999998886
Q ss_pred cC---CCc-eeEccCC
Q 005818 585 RN---LSG-IWNFTNP 596 (676)
Q Consensus 585 ~~---~~g-~yn~~~~ 596 (676)
.. ..| ++.+.++
T Consensus 228 ~~~~~~~G~~i~~dgg 243 (258)
T PRK06398 228 DLASFITGECVTVDGG 243 (258)
T ss_pred cccCCCCCcEEEECCc
Confidence 43 234 5555554
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-13 Score=132.14 Aligned_cols=193 Identities=18% Similarity=0.144 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||+++++.|+++|++| .++.+|++|++.+.++++.+ ++|+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999765 34678999999888877754 5799
Q ss_pred EEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||.... +......++.+..+++|+.++..+++++... +.++|++||...+..
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 145 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG----------------- 145 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC-----------------
Confidence 9999986421 1111123344577899999998877777542 247888888654421
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHHHHHh--cCc----------eeccCCCccc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISR--YNK----------VVNIPNSMTI 571 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~--~~~----------~~~~~~~~~~ 571 (676)
....+.|+.+|...+.+++.+. ...++++..++|+.+..|.. +..+... +.+ ... ...+..
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (256)
T PRK08643 146 -NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT-LGRLSE 223 (256)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC-CCCCcC
Confidence 1224679999999998887753 34689999999999987641 1111000 000 001 124567
Q ss_pred hhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 572 LDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
.+|++.++..++... .+| ++.+.++
T Consensus 224 ~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 224 PEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 899999999988653 334 5555443
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.6e-13 Score=131.46 Aligned_cols=190 Identities=14% Similarity=0.135 Sum_probs=131.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------eeccccCCChHHHHHHhhcc----CCCEEEECccccCCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------EYGKGRLENRSQLLADIQNV----KPTHVFNAAGVTGRPN 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~a~~~~~~~ 447 (676)
|+|+||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+||......
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 83 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQP 83 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCC
Confidence 589999999999999999999999877 46678999998887766632 5799999999652100
Q ss_pred c-chhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 448 V-DWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 448 ~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
. ....++....+++|+.++.++.+++.. .+ .++|++||...++. .....|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------------~~~~~Y~~sK~ 144 (234)
T PRK07577 84 LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-------------------LDRTSYSAAKS 144 (234)
T ss_pred hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-------------------CCchHHHHHHH
Confidence 0 112344556789999999888776643 34 36778877765421 12367999999
Q ss_pred HHHHHHHHcc---CeEEEEeeecccCCCCChHHH---------HHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---
Q 005818 522 MVEELLKEYD---NVCTLRVRMPISSDLNNPRNF---------ITKISRYNKVVNIPNSMTILDELLPISVEMAKRN--- 586 (676)
Q Consensus 522 ~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--- 586 (676)
..|.+++.+. ...++++..++|+.+..+... ...+.... .. ......+|++.+++.++..+
T Consensus 145 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~a~~~~~l~~~~~~~ 220 (234)
T PRK07577 145 ALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI---PM-RRLGTPEEVAAAIAFLLSDDAGF 220 (234)
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC---CC-CCCcCHHHHHHHHHHHhCcccCC
Confidence 9999988753 235899999999998765310 00111110 11 12446899999999998754
Q ss_pred CCc-eeEccCCC
Q 005818 587 LSG-IWNFTNPG 597 (676)
Q Consensus 587 ~~g-~yn~~~~~ 597 (676)
..| .+++.++.
T Consensus 221 ~~g~~~~~~g~~ 232 (234)
T PRK07577 221 ITGQVLGVDGGG 232 (234)
T ss_pred ccceEEEecCCc
Confidence 234 66665543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-13 Score=132.94 Aligned_cols=170 Identities=15% Similarity=0.111 Sum_probs=121.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---CCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---EKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---~~~d 83 (676)
|++|+||||+|+||+++++.|+++ +++|++++|...... .+. ...++.++.+|+.|++++.+++.. .++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~--~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDT--ALQ---ALPGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchH--HHH---hccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 478999999999999999999999 678999988653211 111 123577889999999988777643 3799
Q ss_pred EEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+|+.... ....++....++.|+.++..+++++...- ...+++++||. ++..... +..
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~---------~~~ 142 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELP---------DGG 142 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccC---------CCC
Confidence 99999987532 11233445677889999999888775421 12578888874 2221110 111
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCC
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN 194 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~ 194 (676)
+...|+.+|...+.+++.++.++ ++++..++||.+-.+.
T Consensus 143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 23469999999999999887763 6889999999986654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=134.80 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=135.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++|+||||+|+||.+++++|+++|++| ..+.+|+++++++.++++.+ ++|+||
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi 94 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILV 94 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3589999999999999999999999865 36678999999988887654 679999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++....+++|+.++.++++++... + .++|++||...+.+ ..
T Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~ 156 (255)
T PRK06841 95 NSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA------------------LE 156 (255)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC------------------CC
Confidence 9999652101 11223445567899999999999998653 2 47788877643311 12
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-------HHHHHhcCceeccCCCccchhhHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-------ITKISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
....|+.+|...+.+++.+.. ..++++..++|+.+..+... ....... . ....+.+.+|++++++.
T Consensus 157 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~va~~~~~ 232 (255)
T PRK06841 157 RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKL---I-PAGRFAYPEEIAAAALF 232 (255)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhc---C-CCCCCcCHHHHHHHHHH
Confidence 235699999999999888643 35799999999988765310 0111111 1 12357889999999999
Q ss_pred HHhcC---CCc-eeEccCCC
Q 005818 582 MAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 582 ~~~~~---~~g-~yn~~~~~ 597 (676)
++..+ ..| ++.+.++.
T Consensus 233 l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 233 LASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HcCccccCccCCEEEECCCc
Confidence 98754 234 56665543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=135.15 Aligned_cols=183 Identities=16% Similarity=0.118 Sum_probs=126.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc------CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV------KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~------~~d~ 435 (676)
|++++||||+|+||++++++|+++|++| .++.+|++|.+++.++++.+ ++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4579999999999999999999999754 45678999999888877643 6799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||...... .....++.+..+.+|+.++.++++++.. . +.++|++||...+.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------------ 142 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG------------------ 142 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC------------------
Confidence 999999752111 1112345567899999999999998853 2 357888888644321
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHH--HHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNF--ITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
......|+.||...+.+++.+. ...++++..++|+.+..+..- ...... .......-.+..+|++++++.+++
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~~~~ 220 (260)
T PRK08267 143 QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA--GSTKRLGVRLTPEDVAEAVWAAVQ 220 (260)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh--hhHhhccCCCCHHHHHHHHHHHHh
Confidence 1123579999999999888863 345799999999888654200 000000 000001113456999999999986
Q ss_pred cC
Q 005818 585 RN 586 (676)
Q Consensus 585 ~~ 586 (676)
..
T Consensus 221 ~~ 222 (260)
T PRK08267 221 HP 222 (260)
T ss_pred CC
Confidence 54
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.5e-13 Score=129.98 Aligned_cols=200 Identities=10% Similarity=0.056 Sum_probs=140.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--CCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--EKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~~d~V 85 (676)
|+++||||+|+||+++++.|+++ +++|++.+|..... ..+.. ..+++.+++|+.|++++++++.. .++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDL--EVAAK---ELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH---hccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 37999999999999999999999 67888888754211 11100 11367889999999999887743 268999
Q ss_pred EEccccCC----c-----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 86 MHFAAQTH----V-----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 86 ih~a~~~~----~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
||+|+... . ..+.+++...+++|+.++.++++++... ..-.++|++||... .
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------------------~ 135 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------------------P 135 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------------C
Confidence 99997521 0 0123566788999999999999887642 11258999998540 0
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
....|+.+|...+.+++.++.+ +|+++..+.||.+..+.. ... . . .+ .-..+|+
T Consensus 136 ~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~-~-~-~p----------~~~~~~i 192 (223)
T PRK05884 136 AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGL-S-R-TP----------PPVAAEI 192 (223)
T ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhc-c-C-CC----------CCCHHHH
Confidence 1245999999999999888775 479999999998864421 000 0 0 00 1267999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCC
Q 005818 233 AEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 233 a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
++++..++.... .++.+.+.+|.
T Consensus 193 a~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 193 ARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred HHHHHHHcCchhhccCCcEEEeCCCe
Confidence 999999886432 45667666553
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-13 Score=133.22 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=130.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhcc-------
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNV------- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~------- 431 (676)
+++++||||+|+||.++++.|+++|++|. .+..|+++.+++..+++..
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 36899999999999999999999998662 2345787776666544321
Q ss_pred ----CCCEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 432 ----KPTHVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 432 ----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
++|+|||+||..... ..+...++.+..+++|+.++..+++++... +.++|++||...+.
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------------- 150 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------------- 150 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-------------
Confidence 579999999964211 111122334567889999999999887653 24788888875442
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HH-----HHHHhcCceeccCCCccchh
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FI-----TKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~-----~~~~~~~~~~~~~~~~~~v~ 573 (676)
+......|+.||...+.+++.+. ...++++..+.|+.+..+.. +. ...... ......+...+
T Consensus 151 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 222 (252)
T PRK12747 151 -----SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATT---ISAFNRLGEVE 222 (252)
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHh---cCcccCCCCHH
Confidence 11233679999999999998864 24589999999999987731 11 111100 00123567899
Q ss_pred hHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 574 ELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
|+++++..++... ..| .+.+.++
T Consensus 223 dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 223 DIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHHHcCccccCcCCcEEEecCC
Confidence 9999999987643 234 5555543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.1e-13 Score=130.86 Aligned_cols=195 Identities=15% Similarity=0.149 Sum_probs=136.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------eeccccCCChHHHHHHhhcc-----CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~ 442 (676)
.++++||||+|+||+++++.|+++|++| .++++|+.|++++.++++.+ ++|+|||+||.
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 85 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGG 85 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3689999999999999999999999754 46778999999988887765 68999999996
Q ss_pred cCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 443 TGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 443 ~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
.... ..+...++.+..+++|+.++.++++++... +.++|++||...+. +....+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------------~~~~~~~ 147 (252)
T PRK07856 86 SPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------------PSPGTAA 147 (252)
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------------CCCCCch
Confidence 4210 111223445577899999999999988641 24788888765431 1223467
Q ss_pred hhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH--------HHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 516 YSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
|+.+|...|.+++.+.. .. +++..++|+.+..+..- ...+... .. ...+...+|++++++.++.
T Consensus 148 Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~-~~~~~~p~~va~~~~~L~~ 222 (252)
T PRK07856 148 YGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAAT---VP-LGRLATPADIAWACLFLAS 222 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhc---CC-CCCCcCHHHHHHHHHHHcC
Confidence 99999999999988632 23 89999999988766311 0011110 11 1245678999999999886
Q ss_pred cC---CCc-eeEccCCCcccH
Q 005818 585 RN---LSG-IWNFTNPGVVSH 601 (676)
Q Consensus 585 ~~---~~g-~yn~~~~~~~s~ 601 (676)
.. ..| .+.+.++...+.
T Consensus 223 ~~~~~i~G~~i~vdgg~~~~~ 243 (252)
T PRK07856 223 DLASYVSGANLEVHGGGERPA 243 (252)
T ss_pred cccCCccCCEEEECCCcchHH
Confidence 53 234 667766655444
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=127.84 Aligned_cols=183 Identities=14% Similarity=0.099 Sum_probs=130.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------eccccCCChHHHHHHhhcc-CCCEEEECccccCCCCc-chhccch
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------YGKGRLENRSQLLADIQNV-KPTHVFNAAGVTGRPNV-DWCETHK 455 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~~-~~~~~~~ 455 (676)
|+++||||+|.||.+++++|.++ ++|. .+++|++|+++++++++.. ++|+|||+||....... +...++.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 79 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDF 79 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHH
Confidence 47999999999999999999998 7763 4578999999999988865 68999999996421011 1123345
Q ss_pred hhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC
Q 005818 456 PETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN 532 (676)
Q Consensus 456 ~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~ 532 (676)
...+++|+.++.++++++... +..++++||..... +......|+.+|...+.+++.+..
T Consensus 80 ~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~------------------~~~~~~~Y~~sK~a~~~~~~~la~ 141 (199)
T PRK07578 80 NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE------------------PIPGGASAATVNGALEGFVKAAAL 141 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC------------------CCCCchHHHHHHHHHHHHHHHHHH
Confidence 566899999999999988653 34567776643220 222346799999999999887633
Q ss_pred --eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC-ceeEc
Q 005818 533 --VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS-GIWNF 593 (676)
Q Consensus 533 --~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~-g~yn~ 593 (676)
..++++..+.|+.+-.+..... ... ....++..+|+|+.++.+++.... ++|++
T Consensus 142 e~~~gi~v~~i~Pg~v~t~~~~~~------~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~~~~ 198 (199)
T PRK07578 142 ELPRGIRINVVSPTVLTESLEKYG------PFF-PGFEPVPAARVALAYVRSVEGAQTGEVYKV 198 (199)
T ss_pred HccCCeEEEEEcCCcccCchhhhh------hcC-CCCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence 3589999999988764421111 101 112467899999999999886644 36654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.5e-13 Score=131.73 Aligned_cols=193 Identities=12% Similarity=0.120 Sum_probs=135.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.+++.++++.+ ++|+||
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv 85 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILV 85 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3689999999999999999999999754 46678999999998888764 689999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
|+||....+......++....+++|+.++..+++++.. .+.++|++||...+.+ ....
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------------------~~~~ 147 (261)
T PRK08265 86 NLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA------------------QTGR 147 (261)
T ss_pred ECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC------------------CCCC
Confidence 99996421122233445567789999999999988754 2357888888654421 1223
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc-----e---eccCCCccchhhHHHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK-----V---VNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~---~~~~~~~~~v~D~a~~~~~~ 582 (676)
..|+.+|...+.+++.+. ...++++..++|+.+..+. ...+..... . ......+...+|++++++.+
T Consensus 148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~--~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l 225 (261)
T PRK08265 148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV--MDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFL 225 (261)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh--hhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHH
Confidence 569999999999988763 2358999999999887652 111111100 0 00111345679999999999
Q ss_pred HhcC---CCc-eeEccCC
Q 005818 583 AKRN---LSG-IWNFTNP 596 (676)
Q Consensus 583 ~~~~---~~g-~yn~~~~ 596 (676)
+... ..| ++.+.++
T Consensus 226 ~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 226 CSDAASFVTGADYAVDGG 243 (261)
T ss_pred cCccccCccCcEEEECCC
Confidence 8653 234 5666554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3e-13 Score=133.80 Aligned_cols=190 Identities=11% Similarity=0.122 Sum_probs=133.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||..+++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999743 45688999988888777653 5799
Q ss_pred EEECccccCCCC----------cchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCC
Q 005818 436 VFNAAGVTGRPN----------VDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGT 499 (676)
Q Consensus 436 Vih~a~~~~~~~----------~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~ 499 (676)
|||+||...... .+...++....+++|+.++..+++++.. . +.+++++||...++.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-------- 157 (253)
T PRK08217 86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-------- 157 (253)
T ss_pred EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC--------
Confidence 999999542100 1112334456788999999988765543 2 235677776554421
Q ss_pred CCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCcc
Q 005818 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMT 570 (676)
Q Consensus 500 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~ 570 (676)
.+...|+.+|...|.+++.+.+ ..+++++.++|+.+.++. .+...+.... ....+.
T Consensus 158 -----------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~ 222 (253)
T PRK08217 158 -----------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMI----PVGRLG 222 (253)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcC----CcCCCc
Confidence 2346799999999999888642 368999999999998763 1112222111 122466
Q ss_pred chhhHHHHHHHHHhcC-CC-ceeEccCCC
Q 005818 571 ILDELLPISVEMAKRN-LS-GIWNFTNPG 597 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~-~~-g~yn~~~~~ 597 (676)
+++|+++++..++... .. .+|++.++-
T Consensus 223 ~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 223 EPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred CHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 8999999999988764 23 488888753
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.1e-13 Score=132.37 Aligned_cols=179 Identities=17% Similarity=0.139 Sum_probs=129.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||.+++++|+++|++| .++.+|+++++++.++++.+ ++|+
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 579999999999999999999999765 35678999999988888743 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||....+. .+...++....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~------------------ 149 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG------------------ 149 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC------------------
Confidence 999999652111 1122334457789999999999988864 23 36777777654421
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
..+...|+.+|...+.+++.+. ...++++..++|+.+..+...-.... ......++..+|++++++.++..+
T Consensus 150 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 150 AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-----DGNPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc-----ccCCCCCCCHHHHHHHHHHHHhCC
Confidence 1233569999999998887753 34689999999999887632111111 111234577899999999998765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=131.33 Aligned_cols=178 Identities=15% Similarity=0.108 Sum_probs=128.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc--CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV--KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~--~~d~V 436 (676)
||+|+||||+|+||.+++++|+++|++| .++++|++|++++.++++.+ ++|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 4689999999999999999999999754 46778999999988887754 56999
Q ss_pred EECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||.... +..+...++....+++|+.++.++++++.. .+ .+++++||...+. +.
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~ 142 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR------------------GR 142 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC------------------CC
Confidence 999985421 111222344456789999999999988764 23 4677777753221 11
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~ 587 (676)
.....|+.+|...+.+++.+. ...++++..++|+.++++.. . ... . ...-....+|+++.++.+++++.
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~--~----~~~-~-~~~~~~~~~~~a~~i~~~~~~~~ 214 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT--A----GLK-L-PGPLTAQPEEVAKDIFRAIEKGK 214 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh--h----ccC-C-CccccCCHHHHHHHHHHHHhCCC
Confidence 123569999999999988863 34689999999999987621 1 111 0 01124568999999999888653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.4e-13 Score=129.95 Aligned_cols=183 Identities=9% Similarity=0.064 Sum_probs=128.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~ 442 (676)
+++|+||||+|+||++++++|+++|++| ..+.+|++|.+.+.++++.. ++|+|||+||.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~ 85 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGI 85 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCC
Confidence 4689999999999999999999999765 23457888988888877653 47999999996
Q ss_pred cCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 443 TGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 443 ~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
... +..+...++.+..+++|+.++..++..+.+. +.++|++||.... ..+..+...|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------------~~~~~~~~~Y~~ 148 (237)
T PRK12742 86 AVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD-----------------RMPVAGMAAYAA 148 (237)
T ss_pred CCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc-----------------cCCCCCCcchHH
Confidence 421 1112233455678999999999997766553 3578888875421 012234577999
Q ss_pred hHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH----HHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 519 TKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 519 sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
+|...|.+++.+. ...++++..++|+.+..+.. -........ .. ...+...+|+++++..++...
T Consensus 149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~a~~~~~l~s~~ 220 (237)
T PRK12742 149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSF--MA-IKRHGRPEEVAGMVAWLAGPE 220 (237)
T ss_pred hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhc--CC-CCCCCCHHHHHHHHHHHcCcc
Confidence 9999999998763 34579999999998875421 011111111 11 124567899999999888653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.8e-13 Score=130.76 Aligned_cols=191 Identities=16% Similarity=0.123 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc------CCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV------KPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~------~~d~V 436 (676)
++++||||+|+||+++++.|+++|++| .++++|++|++++.++++.. ++|+|
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~l 85 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTV 85 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 589999999999999999999999764 34668999999888887764 27999
Q ss_pred EECccccC-------CCCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 437 FNAAGVTG-------RPNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 437 ih~a~~~~-------~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
||+|+... .+..+...++....+++|+.++.++++++.. .+ .+++++||....
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--------------- 150 (253)
T PRK08642 86 VNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ--------------- 150 (253)
T ss_pred EECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc---------------
Confidence 99998531 0011122344456799999999999999863 23 367777664321
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhH
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
.+..+.+.|+.+|...|.+++.+.+ ..++++..++|+.+..+.. ......... .. ...+...+|+
T Consensus 151 ---~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~v 224 (253)
T PRK08642 151 ---NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAAT--TP-LRKVTTPQEF 224 (253)
T ss_pred ---CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhc--CC-cCCCCCHHHH
Confidence 1223456899999999999999743 4679999999988765421 111111111 11 1247789999
Q ss_pred HHHHHHHHhcC---CCc-eeEccCC
Q 005818 576 LPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+++++.++... ..| ++.+.++
T Consensus 225 a~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 225 ADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHHHcCchhcCccCCEEEeCCC
Confidence 99999988643 234 5655554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=124.50 Aligned_cols=165 Identities=18% Similarity=0.160 Sum_probs=120.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-----cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-----KNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-----~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++++||||+|+||.++++.|+++|. ..|+..+|....... ..+ .....++..+.+|+.+++.+.+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAEL--EALGAEVTVVACDVADRAALAAALAAIPA 77 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999852 366666665322110 000 01234678899999999888877632
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccc-cCCCCCCcCCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEV-YGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+|+.... ....+++...+++|+.++.+++++++..+ .+++|++||... ++..
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~------------ 144 (180)
T smart00822 78 RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNP------------ 144 (180)
T ss_pred HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCC------------
Confidence 357999999997542 22334556788999999999999997765 688999998544 3321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccC
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 192 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G 192 (676)
....|+.+|...+.+++.. +..+++++.+.||.+-|
T Consensus 145 ---~~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~~ 180 (180)
T smart00822 145 ---GQANYAAANAFLDALAAHR-RARGLPATSINWGAWAD 180 (180)
T ss_pred ---CchhhHHHHHHHHHHHHHH-HhcCCceEEEeeccccC
Confidence 1346999999999999654 45699999999987643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=131.23 Aligned_cols=180 Identities=16% Similarity=0.042 Sum_probs=127.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
+++++||||||.||+.++++|+++|++| .++.+|++|++++.++++.+ ++|++||
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3689999999999999999999999754 45678999999887776654 5799999
Q ss_pred CccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 439 AAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 439 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
+||...... .+...++....+++|+.|+..+++++.. .+ .++|++||...+. +...
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~ 146 (273)
T PRK07825 85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI------------------PVPG 146 (273)
T ss_pred CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC------------------CCCC
Confidence 999652111 1112233456789999999988777643 34 3678888765441 1233
Q ss_pred CCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC
Q 005818 513 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS 588 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 588 (676)
...|+.||...+.+.+.+. +..+++++.++|+.+..+. .. +.. ......++..+|+|+.++.++.++..
T Consensus 147 ~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~--~~----~~~-~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 147 MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL--IA----GTG-GAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh--hc----ccc-cccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 4679999998887776642 3468999999998876431 11 111 01112467899999999999987644
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.1e-13 Score=130.34 Aligned_cols=188 Identities=16% Similarity=0.106 Sum_probs=133.1
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
|+|||++|+||+.++++|+++|++| .++.+|++|+++++++++.+ ++|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999754 35678999999988887664 57999
Q ss_pred EECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||..... ..+....+++..+++|+.++.++++++.+. + .+++++||...+.+ .
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g------------------~ 142 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG------------------N 142 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC------------------C
Confidence 9999965210 112234556678899999999999998753 2 36777777543321 1
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
.+.+.|+.+|...+.+++.+.+ ..++++..++|+.+.++.. +...+....+ ...+.+++|++++++.
T Consensus 143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~ 218 (239)
T TIGR01830 143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIP----LGRFGTPEEVANAVAF 218 (239)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCC----cCCCcCHHHHHHHHHH
Confidence 1236699999999988877532 3689999999998876531 1111221111 2246689999999998
Q ss_pred HHhcC----CCceeEccCC
Q 005818 582 MAKRN----LSGIWNFTNP 596 (676)
Q Consensus 582 ~~~~~----~~g~yn~~~~ 596 (676)
++..+ .+.+||+.++
T Consensus 219 ~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 219 LASDEASYITGQVIHVDGG 237 (239)
T ss_pred HhCcccCCcCCCEEEeCCC
Confidence 88543 2348888764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.4e-13 Score=132.47 Aligned_cols=179 Identities=18% Similarity=0.102 Sum_probs=125.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.+ ++|
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id 119 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD 119 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 35678999999988888732 579
Q ss_pred EEEECccccCCCCcch---hccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 435 HVFNAAGVTGRPNVDW---CETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|||+||......... ...+....+++|+.|+.++++++. +.+ .++|++||..++..
T Consensus 120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 184 (293)
T PRK05866 120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE--------------- 184 (293)
T ss_pred EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC---------------
Confidence 9999999652111110 113345678999999988888764 344 47777777544421
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
+....+.|+.||...+.+++.+. ...++++..++|+.+-.+. ....... .....+..+++|+.++.++
T Consensus 185 --~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~--~~~~~~~-----~~~~~~~pe~vA~~~~~~~ 255 (293)
T PRK05866 185 --ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM--IAPTKAY-----DGLPALTADEAAEWMVTAA 255 (293)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc--ccccccc-----cCCCCCCHHHHHHHHHHHH
Confidence 01223679999999999888763 3468999999998776542 1110000 0112357899999999988
Q ss_pred hcC
Q 005818 584 KRN 586 (676)
Q Consensus 584 ~~~ 586 (676)
+++
T Consensus 256 ~~~ 258 (293)
T PRK05866 256 RTR 258 (293)
T ss_pred hcC
Confidence 764
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.2e-13 Score=130.90 Aligned_cols=183 Identities=16% Similarity=0.116 Sum_probs=128.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
|++++||||+|+||..++++|+++|++| .++.+|++|++++.++++.+ ++|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999754 45789999999888877753 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||...... .+...++....+.+|+.++.++++++.. .+ .++|++||...+.
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 147 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN------------------ 147 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc------------------
Confidence 9999999642100 1112234557789999999998877633 33 4677877776552
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
+..+...|+.+|...+.+++.+. ...++++..++|+.+..+.. .. ....... ....++..+|+|++++.++..
T Consensus 148 ~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~--~~-~~~~~~~-~~~~~~~~~~va~~~~~l~~~ 223 (241)
T PRK07454 148 AFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLW--DT-ETVQADF-DRSAMLSPEQVAQTILHLAQL 223 (241)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcc--cc-ccccccc-ccccCCCHHHHHHHHHHHHcC
Confidence 11234679999999999987753 34589999999999876531 00 0000000 011356789999999999987
Q ss_pred CCC
Q 005818 586 NLS 588 (676)
Q Consensus 586 ~~~ 588 (676)
+..
T Consensus 224 ~~~ 226 (241)
T PRK07454 224 PPS 226 (241)
T ss_pred Ccc
Confidence 643
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.4e-13 Score=132.14 Aligned_cols=185 Identities=15% Similarity=0.094 Sum_probs=125.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc------CCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV------KPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~------~~d~Vih~a 440 (676)
++|+||||+|+||.++++.|+++|++| ..+.+|+.|.+++.++++.+ ++|.+||+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999765 45678888888776665443 469999999
Q ss_pred cccCC-CCcchhccchhhHHhhhhhhHHHH----HHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 441 GVTGR-PNVDWCETHKPETIRTNVVGTLTL----ADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 441 ~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~l----l~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|.... +......++.+..+++|+.|+.++ ++++++.+. +++++||...+. +....+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~~~~~ 144 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI------------------STPGRG 144 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc------------------CCCCcc
Confidence 96421 111112344557789999998876 566666654 567776653221 112346
Q ss_pred chhhhHHHHHHHHHHc---cCeEEEEeeecccCCCCChHHHHHHHHhcC--ce-ec---cCCCccchhhHHHHHHHHHhc
Q 005818 515 FYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYN--KV-VN---IPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~~-~~---~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.|+.+|...|.+.+.+ ....++++.+++|+.+..+ +...+.... .. .. ....+++++|+++++..++++
T Consensus 145 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 222 (256)
T PRK08017 145 AYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR--FTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALES 222 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc--hhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence 7999999999987764 2456899999999877543 222221111 11 00 112468999999999999987
Q ss_pred CCCc
Q 005818 586 NLSG 589 (676)
Q Consensus 586 ~~~g 589 (676)
+...
T Consensus 223 ~~~~ 226 (256)
T PRK08017 223 PKPK 226 (256)
T ss_pred CCCC
Confidence 6544
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.2e-13 Score=137.71 Aligned_cols=195 Identities=12% Similarity=0.020 Sum_probs=127.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
.++|+||||+|+||.+++++|+++|++| .++.+|++|.++++++++.. ++|+|||
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~ 105 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILIN 105 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3689999999999999999999999754 46678999999988877642 5799999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
+||....+ .....+..+..+.+|+.++..+++++ ++.+ .++|++||........... . .....+..+.
T Consensus 106 nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~---~---~~~~~~~~~~ 178 (315)
T PRK06196 106 NAGVMACP-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD---D---PHFTRGYDKW 178 (315)
T ss_pred CCCCCCCC-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc---c---cCccCCCChH
Confidence 99975211 12223345677899999976666544 4443 5788888764332110000 0 0001233445
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHH------HHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FIT------KISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~------~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
..|+.||...+.+.+.+. ...++++..++|+.+.++.. +-. ....... ......+...+|+|..++.+
T Consensus 179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l 257 (315)
T PRK06196 179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPIDPGFKTPAQGAATQVWA 257 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhhhhhcCCHhHHHHHHHHH
Confidence 679999999999887763 34589999999999988731 000 0000000 00000234578999999988
Q ss_pred HhcC
Q 005818 583 AKRN 586 (676)
Q Consensus 583 ~~~~ 586 (676)
+..+
T Consensus 258 ~~~~ 261 (315)
T PRK06196 258 ATSP 261 (315)
T ss_pred hcCC
Confidence 8643
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.2e-13 Score=130.78 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=133.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++++||||+|+||+++++.|+++|++| .++.+|++|.+++.++++.. ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999988643 45678999999888877653 579
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.... +..+...++.+..+++|+.++.+++.++ ++.+ .++|++||...+..
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~----------------- 145 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG----------------- 145 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC-----------------
Confidence 99999996521 0112223455677899999999985544 4444 47777777654421
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
......|+.+|...+.+++.+. ...++++..++|+.+.++. .....+....+ ...+...+|+++++
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~ 220 (245)
T PRK12824 146 -QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIP----MKRLGTPEEIAAAV 220 (245)
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCC----CCCCCCHHHHHHHH
Confidence 1223569999999998887763 2457999999999988763 11111111111 12455789999999
Q ss_pred HHHHhcC----CCceeEccCCCc
Q 005818 580 VEMAKRN----LSGIWNFTNPGV 598 (676)
Q Consensus 580 ~~~~~~~----~~g~yn~~~~~~ 598 (676)
..++... .+.++++.++..
T Consensus 221 ~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 221 AFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred HHHcCccccCccCcEEEECCCee
Confidence 8888643 235888887753
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.3e-13 Score=131.03 Aligned_cols=192 Identities=18% Similarity=0.168 Sum_probs=131.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
|+++||||+|+||.+++++|+++|++| .++.+|++|++++.++++.+ ++|+|||+|
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a 87 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNA 87 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 689999999999999999999999865 35568999999998887754 679999999
Q ss_pred cccCC-CCcchhccchhhHHhhhhhhHHHHHHH----HHHc-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 441 GVTGR-PNVDWCETHKPETIRTNVVGTLTLADV----CREN-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 441 ~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a----~~~~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|.... |......++.+..+++|+.++..+..+ +++. +.++|++||...++. +.....
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------------~~~~~~ 150 (255)
T PRK06463 88 GIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT-----------------AAEGTT 150 (255)
T ss_pred CcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC-----------------CCCCcc
Confidence 96421 111223344567789999997665444 4433 357888888765521 112235
Q ss_pred chhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH----------HHHHHHhcCceeccCCCccchhhHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN----------FITKISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~----------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
.|+.||...+.+++.+. ...++++..++|+.+..+.. .+........ ....+...+|++++++.
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~va~~~~~ 227 (255)
T PRK06463 151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---VLKTTGKPEDIANIVLF 227 (255)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---CcCCCcCHHHHHHHHHH
Confidence 69999999999998874 34689999999998864421 0011111111 11235678999999999
Q ss_pred HHhcC---CCc-eeEccCC
Q 005818 582 MAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 582 ~~~~~---~~g-~yn~~~~ 596 (676)
++... ..| .+.+.++
T Consensus 228 l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 228 LASDDARYITGQVIVADGG 246 (255)
T ss_pred HcChhhcCCCCCEEEECCC
Confidence 88654 234 6666554
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-13 Score=133.75 Aligned_cols=196 Identities=15% Similarity=0.107 Sum_probs=135.8
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|+|+||||.+|+.+++.|++.+++| +.+.+|+.|.+.+.++++++ |.||.+.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--d~v~~~~~~~--- 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGV--DAVFSVTPPS--- 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTC--SEEEEESSCS---
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCC--ceEEeecCcc---
Confidence 7999999999999999999999865 67789999999999999999 9999887743
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
. ..-.....++++||++.|++++++||...- . +......|....-..|...|+.
T Consensus 76 ~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~---~-----------~~~~~~~p~~~~~~~k~~ie~~ 129 (233)
T PF05368_consen 76 H------------PSELEQQKNLIDAAKAAGVKHFVPSSFGAD---Y-----------DESSGSEPEIPHFDQKAEIEEY 129 (233)
T ss_dssp C------------CCHHHHHHHHHHHHHHHT-SEEEESEESSG---T-----------TTTTTSTTHHHHHHHHHHHHHH
T ss_pred h------------hhhhhhhhhHHHhhhccccceEEEEEeccc---c-----------cccccccccchhhhhhhhhhhh
Confidence 1 112445678999999999999888774211 1 1111222334455689999999
Q ss_pred HHHccCeEEEEeeecccCCCCChH-HHHHHH--HhcCc--eeccCC-----Cc-cchhhHHHHHHHHHhcC-CC---cee
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPR-NFITKI--SRYNK--VVNIPN-----SM-TILDELLPISVEMAKRN-LS---GIW 591 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~--~~~~~--~~~~~~-----~~-~~v~D~a~~~~~~~~~~-~~---g~y 591 (676)
+++. +++++++|++..+... ...... ..... .....+ .+ +..+|+++++..++..+ .. ..+
T Consensus 130 l~~~----~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~ 205 (233)
T PF05368_consen 130 LRES----GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTI 205 (233)
T ss_dssp HHHC----TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEE
T ss_pred hhhc----cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEE
Confidence 9765 7889999987644211 001110 11111 111111 44 48899999999999876 22 367
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcc
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKW 618 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~ 618 (676)
.+++ +.+|..|+++.+.+.+|.++++
T Consensus 206 ~~~~-~~~t~~eia~~~s~~~G~~v~y 231 (233)
T PF05368_consen 206 FLAG-ETLTYNEIAAILSKVLGKKVKY 231 (233)
T ss_dssp EEGG-GEEEHHHHHHHHHHHHTSEEEE
T ss_pred EeCC-CCCCHHHHHHHHHHHHCCccEE
Confidence 7655 8899999999999999987654
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.2e-13 Score=130.79 Aligned_cols=194 Identities=15% Similarity=0.108 Sum_probs=130.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++++||||+|+||+++++.|+++|+.| .++.+|++|.++++++++.. ++|+||
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILV 85 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3689999999999999999999999754 45678999999988876543 579999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... ......+.+..+++|+.++.++++++.+ .+.++|++||...+.+. .
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~ 147 (245)
T PRK12936 86 NNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN------------------P 147 (245)
T ss_pred ECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC------------------C
Confidence 9999642100 1122345567889999999999888753 23468888876444211 1
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-HHHHHHhc--CceeccCCCccchhhHHHHHHHHHhc
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-FITKISRY--NKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~~~~~~~~--~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
....|+.+|...+.+++.+. ...++++..++|+.+..+.. ........ ..... ...+...+|+++++..++..
T Consensus 148 ~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ia~~~~~l~~~ 226 (245)
T PRK12936 148 GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIP-MKRMGTGAEVASAVAYLASS 226 (245)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCC-CCCCcCHHHHHHHHHHHcCc
Confidence 22569999998888776653 23579999999998765421 00000000 00011 12355789999999888754
Q ss_pred C---CCc-eeEccCC
Q 005818 586 N---LSG-IWNFTNP 596 (676)
Q Consensus 586 ~---~~g-~yn~~~~ 596 (676)
. ..| ++++.++
T Consensus 227 ~~~~~~G~~~~~~~g 241 (245)
T PRK12936 227 EAAYVTGQTIHVNGG 241 (245)
T ss_pred cccCcCCCEEEECCC
Confidence 3 134 7887765
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.5e-13 Score=132.54 Aligned_cols=182 Identities=16% Similarity=0.093 Sum_probs=125.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
|+|+||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999765 34678999999888877642 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||...... .....++.+..+++|+.++.++.+++ ++.+ .+++++||...+. +
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------~ 142 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM------------------Q 142 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC------------------C
Confidence 999999652111 11112334456889998888866664 4555 4677777765442 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCce------eccCCCccchhhHHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKV------VNIPNSMTILDELLPISV 580 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~v~D~a~~~~ 580 (676)
....+.|+.+|...+.+.+.+. ...++++..++|+.+..+. ........+. ......++.++|+|+.++
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~ 220 (270)
T PRK05650 143 GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL--LDSFRGPNPAMKAQVGKLLEKSPITAADIADYIY 220 (270)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc--ccccccCchhHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 2234679999999887777653 2358999999999987652 1100000000 001225678999999999
Q ss_pred HHHhcC
Q 005818 581 EMAKRN 586 (676)
Q Consensus 581 ~~~~~~ 586 (676)
.++++.
T Consensus 221 ~~l~~~ 226 (270)
T PRK05650 221 QQVAKG 226 (270)
T ss_pred HHHhCC
Confidence 999864
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-12 Score=133.38 Aligned_cols=191 Identities=11% Similarity=0.047 Sum_probs=130.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||.++++.|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD 87 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID 87 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 4689999999999999999999999754 35678999999998887653 579
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
++||+||.... +..+...++.+..+++|+.++.++.+++ ++.+ .++|++||...+..
T Consensus 88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~----------------- 150 (334)
T PRK07109 88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS----------------- 150 (334)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC-----------------
Confidence 99999996411 1111223344567888888877755554 4433 47888888766521
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChH-HHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPR-NFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
....+.|+.+|...+.+.+.+. +..+++++.++|+.+..|. .......... ......+...+|+|++++.+
T Consensus 151 -~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~--~~~~~~~~~pe~vA~~i~~~ 227 (334)
T PRK07109 151 -IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVE--PQPVPPIYQPEVVADAILYA 227 (334)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcccc--ccCCCCCCCHHHHHHHHHHH
Confidence 1223679999999988877652 2347999999999988763 1111111110 11112455789999999999
Q ss_pred HhcCCCceeEccC
Q 005818 583 AKRNLSGIWNFTN 595 (676)
Q Consensus 583 ~~~~~~g~yn~~~ 595 (676)
+.++. ..+.++.
T Consensus 228 ~~~~~-~~~~vg~ 239 (334)
T PRK07109 228 AEHPR-RELWVGG 239 (334)
T ss_pred HhCCC-cEEEeCc
Confidence 98762 3444443
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=130.31 Aligned_cols=181 Identities=11% Similarity=0.022 Sum_probs=126.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||.+++++|+++|++| .++.+|+++++++.++++.+ ++|
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 89 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLD 89 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999764 35678999999988877754 679
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH-----c-CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE-----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||..... ..+...++....+.+|+.++.++++++.. . ..+++++||.....
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------- 152 (263)
T PRK07814 90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------------- 152 (263)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------------
Confidence 999999864210 11222345667899999999999999974 2 24678887753221
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe--EEEEeeecccCCCCChH-HH------HHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR-NF------ITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~-~~------~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+.+.|+.+|...|.+++.+... ..+++..+.|+.+..+. .. +....... .. .......+|++++
T Consensus 153 -~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~va~~ 228 (263)
T PRK07814 153 -AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA--TP-LRRLGDPEDIAAA 228 (263)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc--CC-CCCCcCHHHHHHH
Confidence 2234467999999999999886321 24788888888876431 10 11111111 01 1134578999999
Q ss_pred HHHHHhc
Q 005818 579 SVEMAKR 585 (676)
Q Consensus 579 ~~~~~~~ 585 (676)
++.++..
T Consensus 229 ~~~l~~~ 235 (263)
T PRK07814 229 AVYLASP 235 (263)
T ss_pred HHHHcCc
Confidence 9998864
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.8e-13 Score=148.32 Aligned_cols=199 Identities=14% Similarity=0.082 Sum_probs=139.6
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
..++|+||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34789999999999999999999999754 25678999999988877654 579
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||..... .......+....+++|+.|+.++++++.+ . +.++|++||...+.
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~----------------- 563 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN----------------- 563 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC-----------------
Confidence 999999965211 11122344557789999999999887753 2 35788888875542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCC-ChHH----HHH-HHH-hcCce---------eccCCC
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLN-NPRN----FIT-KIS-RYNKV---------VNIPNS 568 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~-g~~~----~~~-~~~-~~~~~---------~~~~~~ 568 (676)
+......|+.+|...|.+++.+. ...++++..++|+.+| ++.. +.. +.. .+... ......
T Consensus 564 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 642 (681)
T PRK08324 564 -PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKR 642 (681)
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCC
Confidence 11234679999999999998864 3457999999999997 4421 110 111 01000 011226
Q ss_pred ccchhhHHHHHHHHHhc--C-C-CceeEccCCCcc
Q 005818 569 MTILDELLPISVEMAKR--N-L-SGIWNFTNPGVV 599 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~--~-~-~g~yn~~~~~~~ 599 (676)
+++++|+|++++.++.. . . +.+|++.++...
T Consensus 643 ~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 643 EVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred ccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 88999999999998842 2 2 348999887654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.6e-13 Score=131.26 Aligned_cols=183 Identities=14% Similarity=0.115 Sum_probs=128.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++|+||||+|+||++++++|+++|++| ..+.+|+++++++.++++.. ++|
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTID 88 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 3689999999999999999999999754 46778999999888887753 579
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc-------------CCcEEEeecCeeeecCCCCCCCCC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN-------------GLLMMNYATGCIFEYDAKHPEGTG 500 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-------------~~~~v~~sS~~v~~~~~~~~~~~~ 500 (676)
+|||+|+..... ..+...++....+++|+.++.++++++... +.++|++||+..+.
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------- 158 (258)
T PRK06949 89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR---------- 158 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC----------
Confidence 999999964211 111223456678899999999999887532 23677777765441
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH---HHHHH-hcCceeccCCCccchh
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---ITKIS-RYNKVVNIPNSMTILD 573 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---~~~~~-~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.+|...|.+++.+.. ..++++..++|+.++++... ..... ....... ...+.-.+
T Consensus 159 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~p~ 229 (258)
T PRK06949 159 --------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLP-RKRVGKPE 229 (258)
T ss_pred --------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCC-CCCCcCHH
Confidence 112346799999999999988632 35899999999999987421 11100 0001111 12455679
Q ss_pred hHHHHHHHHHhc
Q 005818 574 ELLPISVEMAKR 585 (676)
Q Consensus 574 D~a~~~~~~~~~ 585 (676)
|+++++..++..
T Consensus 230 ~~~~~~~~l~~~ 241 (258)
T PRK06949 230 DLDGLLLLLAAD 241 (258)
T ss_pred HHHHHHHHHhCh
Confidence 999999988764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=127.68 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=130.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
++|+||||+|+||++++++|+++|++| ..+.+|+.|.+++.++++.. ++|+|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVL 86 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 589999999999999999999999754 34678999999988877743 57999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
||+|+...... .+...++....+++|+.++.++++++... + .++|++||...+. +..
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~~ 148 (237)
T PRK07326 87 IANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN------------------FFA 148 (237)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc------------------CCC
Confidence 99998652111 11223344577899999999998888642 2 3567777654331 112
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS 588 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 588 (676)
+...|+.+|+..+.+.+.+. +..++++..++|+.+..+. ... .. .......+..+|+++.++.++..+..
T Consensus 149 ~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~--~~~----~~-~~~~~~~~~~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 149 GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF--NGH----TP-SEKDAWKIQPEDIAQLVLDLLKMPPR 221 (237)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc--ccc----cc-chhhhccCCHHHHHHHHHHHHhCCcc
Confidence 34669999999998887752 4468999999999886542 110 00 00001236789999999999887632
Q ss_pred ---ceeEccCCCc
Q 005818 589 ---GIWNFTNPGV 598 (676)
Q Consensus 589 ---g~yn~~~~~~ 598 (676)
+...+.++.+
T Consensus 222 ~~~~~~~~~~~~~ 234 (237)
T PRK07326 222 TLPSKIEVRPSRP 234 (237)
T ss_pred ccccceEEecCCC
Confidence 3555554443
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-13 Score=134.52 Aligned_cols=148 Identities=16% Similarity=0.106 Sum_probs=111.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
||+++||||+|+||++++++|+++|++| .++.+|++|.+.+.++++.+ ++|+|||+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4689999999999999999999999866 34678999999988887655 689999999
Q ss_pred cccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 441 GVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 441 ~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
|.... +..+...++....+++|+.++.++++++.. ...+++++||...+. +....+.
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~ 142 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL------------------VTPFAGA 142 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC------------------CCCCccH
Confidence 96421 111223345567789999999999988743 224667777754331 1122367
Q ss_pred hhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCCh
Q 005818 516 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 549 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 549 (676)
|+.+|...+.+.+.+. ...++++..++|+.+..+
T Consensus 143 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 143 YCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 9999999999887753 346899999999998754
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=126.60 Aligned_cols=206 Identities=17% Similarity=0.164 Sum_probs=136.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|++|||||++.||.+++++|. + +++|++.+|...... .+.+. ......+.++++|+.|+++++++++. .
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLR-QRGATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHH-hccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 579999999999999999998 5 578888887642211 00111 11123478899999999998877632 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+||..... ...++..+....|+.+...++.++ .+.+.-.++|++||...+-...
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------- 145 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR----------- 145 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-----------
Confidence 699999999986431 122223355677877777655443 3322125899999965432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...+.+.+.++.+ .|+++..+.||.+..+.... ..+.+ -....
T Consensus 146 ---~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~-------------~~~~~---------~~~~p 200 (246)
T PRK05599 146 ---ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG-------------MKPAP---------MSVYP 200 (246)
T ss_pred ---CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC-------------CCCCC---------CCCCH
Confidence 1345999999999999887775 37899999999887653210 00000 02467
Q ss_pred HHHHHHHHHHHhcCCCCceEEEcC
Q 005818 230 EDVAEAFDTILHKGEVGHVYNIGT 253 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~~~~~y~i~~ 253 (676)
+|+|++++.+++....++.+.+..
T Consensus 201 e~~a~~~~~~~~~~~~~~~~~~~~ 224 (246)
T PRK05599 201 RDVAAAVVSAITSSKRSTTLWIPG 224 (246)
T ss_pred HHHHHHHHHHHhcCCCCceEEeCc
Confidence 999999999998765445555544
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=129.02 Aligned_cols=184 Identities=14% Similarity=0.076 Sum_probs=124.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-----CCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~ 439 (676)
+++|+||||+|+||.+++++|+++|++| .++.+|++|+++++++++.+ ++|+|||+
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 86 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNN 86 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999999999865 35678999999988888754 67999999
Q ss_pred ccccCC---CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 440 AGVTGR---PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 440 a~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
||.... +-.....+..+..+++|+.++..+++.+.. .+ .++|++||.....+ +..
T Consensus 87 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g-----------------~~~ 149 (255)
T PRK06057 87 AGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG-----------------SAT 149 (255)
T ss_pred CCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC-----------------CCC
Confidence 986521 000112234567789999999888877642 33 46777777543211 011
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HH----HHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FI----TKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~----~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+...|+.+|...+.+++.+. ...++++..++|+.+.+|.. .. ....+...... ...+..++|+++++..+
T Consensus 150 ~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l 228 (255)
T PRK06057 150 SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVP-MGRFAEPEEIAAAVAFL 228 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCC-CCCCcCHHHHHHHHHHH
Confidence 23569999987777766532 23479999999999987741 10 00000000111 23578899999998887
Q ss_pred Hhc
Q 005818 583 AKR 585 (676)
Q Consensus 583 ~~~ 585 (676)
+..
T Consensus 229 ~~~ 231 (255)
T PRK06057 229 ASD 231 (255)
T ss_pred hCc
Confidence 754
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-12 Score=131.28 Aligned_cols=190 Identities=17% Similarity=0.114 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++|+|+||||+|+||+++++.|.++ +++|++++|...... .... .....+..+.+|++|++.+.+.+ .++|+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~-~~~~--~~~~~v~~v~~Dvsd~~~v~~~l--~~IDi 248 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKIT-LEIN--GEDLPVKTLHWQVGQEAALAELL--EKVDI 248 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHH-HHHh--hcCCCeEEEEeeCCCHHHHHHHh--CCCCE
Confidence 45689999999999999999999999 678888887542111 0011 11224678899999999998888 68999
Q ss_pred EEEccccCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHc----CC--C-ceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 85 IMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKIT----GQ--I-KRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 85 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~--~-~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
+||+||.... +.+.+++...+++|+.++.++++++... +. . ..+|.+|++.. .. ..
T Consensus 249 LInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~~---------------~~ 312 (406)
T PRK07424 249 LIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-NP---------------AF 312 (406)
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-cC---------------CC
Confidence 9999987542 2334456788999999999999887531 10 1 23455554221 10 01
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
...|++||...+.+....+...+..+..+.||.+ .. .+ + + ...+..+|+|+.+
T Consensus 313 ~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~----~t--~~----------~-~----------~~~~spe~vA~~i 365 (406)
T PRK07424 313 SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPF----KS--NL----------N-P----------IGVMSADWVAKQI 365 (406)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCC----cC--CC----------C-c----------CCCCCHHHHHHHH
Confidence 2359999999998764322223444444444432 11 11 0 0 0246789999999
Q ss_pred HHHHhcCC
Q 005818 237 DTILHKGE 244 (676)
Q Consensus 237 ~~~~~~~~ 244 (676)
+.+++++.
T Consensus 366 l~~i~~~~ 373 (406)
T PRK07424 366 LKLAKRDF 373 (406)
T ss_pred HHHHHCCC
Confidence 99997664
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=127.68 Aligned_cols=190 Identities=17% Similarity=0.156 Sum_probs=130.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+.++||||+|+||++++++|+++|++|. .+.+|++|.+++.++++.. ++|
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID 83 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 5799999999999999999999997642 3458999999888877643 579
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH----HcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR----ENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.... +..+...++.+..+++|+.++..+++++. +.+. ++|++||.....
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 145 (246)
T PRK12938 84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK------------------ 145 (246)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC------------------
Confidence 99999996521 11122344556778999999887766654 3443 678887754321
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..+...|+.+|...+.+++.+. ...++++..++|+.+..|.. ++..+....+ ...+...+|++.++
T Consensus 146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~ 221 (246)
T PRK12938 146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP----VRRLGSPDEIGSIV 221 (246)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCC----ccCCcCHHHHHHHH
Confidence 11234679999999888877753 34689999999999987731 1111111111 12355789999999
Q ss_pred HHHHhcC---CCc-eeEccCC
Q 005818 580 VEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~ 596 (676)
..++..+ ..| ++.+.++
T Consensus 222 ~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 222 AWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHcCcccCCccCcEEEECCc
Confidence 9887653 223 5655543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=128.69 Aligned_cols=181 Identities=15% Similarity=0.103 Sum_probs=128.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL 82 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999998654 45678999999988877654 57
Q ss_pred CEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||....... ....+.....+++|+.++.++++++. +.+ .++|++||...+.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 147 (248)
T PRK08251 83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL--------------- 147 (248)
T ss_pred CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC---------------
Confidence 999999996521111 11123345678999999999988874 333 467888776543210
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
..+.+.|+.||...+.+.+.+. ...+++++.++|+.+..+.. .. ... ....+..+|+|+.++.+++
T Consensus 148 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~--~~-~~~------~~~~~~~~~~a~~i~~~~~ 216 (248)
T PRK08251 148 --PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN--AK-AKS------TPFMVDTETGVKALVKAIE 216 (248)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh--hc-ccc------CCccCCHHHHHHHHHHHHh
Confidence 1234679999999998887753 23579999999999986521 11 100 1134678999999999998
Q ss_pred cCCCcee
Q 005818 585 RNLSGIW 591 (676)
Q Consensus 585 ~~~~g~y 591 (676)
+....+|
T Consensus 217 ~~~~~~~ 223 (248)
T PRK08251 217 KEPGRAA 223 (248)
T ss_pred cCCCeEE
Confidence 7654454
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=129.24 Aligned_cols=192 Identities=19% Similarity=0.108 Sum_probs=130.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+++||||+|+||.+++++|+++|++| ..+.+|++|++++.++++.. ++|+|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 69999999999999999999999754 45678999999988876654 57999
Q ss_pred EECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+|+.... +..+...++.+..+++|+.++..+++++.+ .+ .+++++||.....+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------ 143 (254)
T TIGR02415 82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG------------------ 143 (254)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC------------------
Confidence 999996410 011222344557799999999988777654 22 46777777544321
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-HHHHHHhcCc------------eeccCCCccchh
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-FITKISRYNK------------VVNIPNSMTILD 573 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~~~~~~~~~~------------~~~~~~~~~~v~ 573 (676)
....+.|+.+|...|.+++.+. ...++++..++|+.+..+.. -+........ .......+...+
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T TIGR02415 144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPE 223 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHH
Confidence 1224679999999999998753 23479999999998876531 1111000000 000112467889
Q ss_pred hHHHHHHHHHhcCC---CceeEccC
Q 005818 574 ELLPISVEMAKRNL---SGIWNFTN 595 (676)
Q Consensus 574 D~a~~~~~~~~~~~---~g~yn~~~ 595 (676)
|+++++..++.... .|.+...+
T Consensus 224 ~~a~~~~~l~~~~~~~~~g~~~~~d 248 (254)
T TIGR02415 224 DVAGLVSFLASEDSDYITGQSILVD 248 (254)
T ss_pred HHHHHHHhhcccccCCccCcEEEec
Confidence 99999999988652 35444444
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.4e-13 Score=129.69 Aligned_cols=192 Identities=15% Similarity=0.142 Sum_probs=131.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
++++++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.. +
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 34689999999999999999999998754 34568999999988877643 5
Q ss_pred CCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||...... .+...++.+..+++|+.++.++++++... + .+++++||...+.+.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-------------- 149 (247)
T PRK05565 84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-------------- 149 (247)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC--------------
Confidence 799999999651100 11223445677899999999988887642 2 357777776544211
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
.....|+.+|...+.+++.+.+ ..++++..++|+.+..+.. ....+.. ......+...+|+++
T Consensus 150 ----~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~va~ 221 (247)
T PRK05565 150 ----SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE----EIPLGRLGKPEEIAK 221 (247)
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh----cCCCCCCCCHHHHHH
Confidence 1235699999998888777532 3589999999998865421 1111111 011124568899999
Q ss_pred HHHHHHhcCC---Cc-eeEccCC
Q 005818 578 ISVEMAKRNL---SG-IWNFTNP 596 (676)
Q Consensus 578 ~~~~~~~~~~---~g-~yn~~~~ 596 (676)
+++.++.... +| .+++.++
T Consensus 222 ~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 222 VVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred HHHHHcCCccCCccCcEEEecCC
Confidence 9999886542 23 6666654
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-12 Score=113.18 Aligned_cols=220 Identities=16% Similarity=0.087 Sum_probs=149.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
+.+..+||||+..||++++..|.++ +.+|.+.++....+.... ...........+.||+.++.++...+++ .
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata-~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATA-GDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHH-hhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999 566666665432221110 1111123567789999999988765532 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc----C-CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT----G-QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++++++|||+... .+..++|...+.+|+.|+..+-+++.+. + ..-.+|.+||+----++-+
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--------- 160 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--------- 160 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---------
Confidence 79999999999763 4677889999999999999888776543 1 1238999999533222222
Q ss_pred CCCCCCChhHHHHHH----HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 152 SQLLPTNPYSATKAG----AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~----~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
++.|+++|.- .-..+++.+++ ++++.++-||+|--|.. ..+.+.++..+...-|..- +=
T Consensus 161 -----QtnYAAsK~GvIgftktaArEla~k-nIrvN~VlPGFI~tpMT--~~mp~~v~~ki~~~iPmgr---------~G 223 (256)
T KOG1200|consen 161 -----QTNYAASKGGVIGFTKTAARELARK-NIRVNVVLPGFIATPMT--EAMPPKVLDKILGMIPMGR---------LG 223 (256)
T ss_pred -----chhhhhhcCceeeeeHHHHHHHhhc-CceEeEeccccccChhh--hhcCHHHHHHHHccCCccc---------cC
Confidence 2348888753 33344454443 89999999999998875 2445566666665544322 33
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+|+|..++++..... .+..+.+.+|
T Consensus 224 ~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 224 EAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred CHHHHHHHHHHHhccccccccceeEEEecc
Confidence 45899999988874332 3455666554
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-12 Score=127.40 Aligned_cols=194 Identities=15% Similarity=0.140 Sum_probs=131.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
+++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.+ ++|+
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 85 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDV 85 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence 4689999999999999999999999754 46779999998888777654 5799
Q ss_pred EEECccccCCCC--cchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN--VDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||....+. .....+..+..+++|+.++..+++++.. .+.++|++||...+. +
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~ 147 (272)
T PRK08589 86 LFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA------------------A 147 (272)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC------------------C
Confidence 999999652111 1112233456778999999877776543 346788888865442 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-HHH--------HHHhcC--ceeccCCCccchhhH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-FIT--------KISRYN--KVVNIPNSMTILDEL 575 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~~~--------~~~~~~--~~~~~~~~~~~v~D~ 575 (676)
......|+.||...+.+++.+. ...++++..+.|+.+..+.. -+. ...... .... ...+...+|+
T Consensus 148 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v 226 (272)
T PRK08589 148 DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-LGRLGKPEEV 226 (272)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-CCCCcCHHHH
Confidence 1223679999999999998864 24589999999999876521 000 000000 0001 1135678999
Q ss_pred HHHHHHHHhcC---CCc-eeEccCC
Q 005818 576 LPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+++++.++... ..| .+.+.++
T Consensus 227 a~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 227 AKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred HHHHHHHcCchhcCcCCCEEEECCC
Confidence 99999888643 234 5555444
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-12 Score=126.82 Aligned_cols=180 Identities=14% Similarity=0.150 Sum_probs=129.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
.++++||||+|.||++++++|+++|++| ..+.+|++|++++.++++.. ++|++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~l 87 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDIL 87 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999755 45678999999998888753 68999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+||...... .+...++.+..+++|+.++..+.+++.. . +.++|++||...+..
T Consensus 88 v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------------ 149 (251)
T PRK12481 88 INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG------------------ 149 (251)
T ss_pred EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC------------------
Confidence 99999652111 1223345567789999999988887753 2 257888888765521
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-HHH-------HHHHhcCceeccCCCccchhhHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-NFI-------TKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-~~~-------~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
......|+.||...+.+++.+.. ..++++..+.|+.+-.+. ..+ ..+... .. ...+...+|++.+
T Consensus 150 ~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~p-~~~~~~peeva~~ 225 (251)
T PRK12481 150 GIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER---IP-ASRWGTPDDLAGP 225 (251)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc---CC-CCCCcCHHHHHHH
Confidence 11224699999999999987642 468999999999886542 100 011110 11 1245678999999
Q ss_pred HHHHHhc
Q 005818 579 SVEMAKR 585 (676)
Q Consensus 579 ~~~~~~~ 585 (676)
+..++..
T Consensus 226 ~~~L~s~ 232 (251)
T PRK12481 226 AIFLSSS 232 (251)
T ss_pred HHHHhCc
Confidence 9998864
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.4e-13 Score=130.86 Aligned_cols=145 Identities=17% Similarity=0.096 Sum_probs=104.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|++++.+++.. ++|+|||+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW-DVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC-CCCEEEEC
Confidence 3579999999999999999999999765 3456899999999888764 57999999
Q ss_pred ccccCC-CCcchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 440 AGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 440 a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
||.... +......++....+++|+.++.++.+++ ++.+. ++|++||...+.. ....
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~ 142 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT------------------GPFT 142 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC------------------CCCc
Confidence 996521 1111223334566889999988776644 34443 6777777543211 1223
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCC
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLN 547 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~ 547 (676)
..|+.||...|.+++.+. +..+++++.+||+.+.
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 679999999999887753 3468999999997764
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-12 Score=127.25 Aligned_cols=191 Identities=17% Similarity=0.193 Sum_probs=133.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++|+||||+|+||.+++++|+++|++| .++.+|+++.+++.++++.+ ++|+
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 94 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI 94 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999754 46779999999988887754 5799
Q ss_pred EEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||.... |..+...++.+..+++|+.++..+++++.. .+ .+++++||...+.+
T Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 156 (258)
T PRK06935 95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------------ 156 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------------
Confidence 9999996421 111222345567789999998888877653 33 47788888765421
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-HH-------HHHHhcCceeccCCCccchhhHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-FI-------TKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-~~-------~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
......|+.+|...|.+++.+.+ ..++++..++|+.+..+.. .. ..+.. ... ...+...+|++..
T Consensus 157 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~dva~~ 232 (258)
T PRK06935 157 GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILK---RIP-AGRWGEPDDLMGA 232 (258)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHh---cCC-CCCCCCHHHHHHH
Confidence 12235799999999999988743 4579999999998876521 00 01111 011 1356678999999
Q ss_pred HHHHHhcC---CCc-eeEccCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~ 596 (676)
+..++... ..| ++.+.++
T Consensus 233 ~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 233 AVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred HHHHcChhhcCCCCCEEEECCC
Confidence 98888643 234 5555554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=123.83 Aligned_cols=184 Identities=16% Similarity=0.140 Sum_probs=134.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCc-------------------------eeeccccCCChHHHHHHhhc-----cC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIP-------------------------FEYGKGRLENRSQLLADIQN-----VK 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~-------------------------v~~~~~Dl~d~~~~~~~~~~-----~~ 432 (676)
++++++|||||+.||..++++|+++|++ |.++..|+++++++.++.+. ..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGP 84 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCc
Confidence 4568999999999999999999999974 36889999999988877653 25
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|++||+||+..- +-.+...++.++++++|+.++..|-.+... . ..++|.++|...|-
T Consensus 85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~---------------- 148 (265)
T COG0300 85 IDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI---------------- 148 (265)
T ss_pred ccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC----------------
Confidence 7999999997531 122334455568899999999888776643 2 35899999987662
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHc---cCeEEEEeeecccCCCCChHHHHHHHHhcCc--eeccCCCccchhhHHHHHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNK--VVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~v~D~a~~~~~ 581 (676)
|.+-.+.|+.||...-.+.+.. -+..|+++..+-|+.+.-. |.. ..+.. ......-++..+|+|+..+.
T Consensus 149 --p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~--f~~--~~~~~~~~~~~~~~~~~~~~va~~~~~ 222 (265)
T COG0300 149 --PTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE--FFD--AKGSDVYLLSPGELVLSPEDVAEAALK 222 (265)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc--ccc--ccccccccccchhhccCHHHHHHHHHH
Confidence 3333478999999887776664 2567899999999887742 322 11111 11122356789999999999
Q ss_pred HHhcCCC
Q 005818 582 MAKRNLS 588 (676)
Q Consensus 582 ~~~~~~~ 588 (676)
++.+...
T Consensus 223 ~l~~~k~ 229 (265)
T COG0300 223 ALEKGKR 229 (265)
T ss_pred HHhcCCc
Confidence 9987543
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=127.04 Aligned_cols=189 Identities=17% Similarity=0.131 Sum_probs=130.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++|+||||+|+||.+++++|+++|++| ..+.+|+.|.++++++++.+ ++|+
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 88 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI 88 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999754 45678999999888777654 5799
Q ss_pred EEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+|+... .+..+...++.+..+++|+.++..+++++. +.+ .+++++||...+.
T Consensus 89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------ 150 (252)
T PRK07035 89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS------------------ 150 (252)
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC------------------
Confidence 999998531 111222334455778999999998887773 333 4677777653321
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchhhHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
+..+.+.|+.||...|.+++++.+ ..++++..+.|+.+..+. .......... . ...+...+|+++
T Consensus 151 ~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~va~ 226 (252)
T PRK07035 151 PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHI---P-LRRHAEPSEMAG 226 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccC---C-CCCcCCHHHHHH
Confidence 223446799999999999998743 358999999998876431 0111111111 1 124556889999
Q ss_pred HHHHHHhcC---CCc-eeEccC
Q 005818 578 ISVEMAKRN---LSG-IWNFTN 595 (676)
Q Consensus 578 ~~~~~~~~~---~~g-~yn~~~ 595 (676)
+++.++... ..| ++++.+
T Consensus 227 ~~~~l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 227 AVLYLASDASSYTTGECLNVDG 248 (252)
T ss_pred HHHHHhCccccCccCCEEEeCC
Confidence 999988654 234 555544
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=126.93 Aligned_cols=189 Identities=12% Similarity=0.079 Sum_probs=133.8
Q ss_pred EEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-CCCEEEECcccc
Q 005818 388 LIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVT 443 (676)
Q Consensus 388 litG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~ 443 (676)
+||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|++||+|+..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 599999999999999999998654 46678999999999988764 469999999964
Q ss_pred CCCC-cchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 444 GRPN-VDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
.... .+...++....+++|+.++.+++++....+ .++|++||...+. +..+.+.|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~------------------~~~~~~~Y~~sK~ 142 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR------------------PSASGVLQGAINA 142 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC------------------CCCcchHHHHHHH
Confidence 2111 112234566788999999999999665544 4677777776552 1234467999999
Q ss_pred HHHHHHHHcc-CeEEEEeeecccCCCCChHHH----------HHHHHhcCceeccCCCccchhhHHHHHHHHHhcC-C-C
Q 005818 522 MVEELLKEYD-NVCTLRVRMPISSDLNNPRNF----------ITKISRYNKVVNIPNSMTILDELLPISVEMAKRN-L-S 588 (676)
Q Consensus 522 ~~E~~~~~~~-~~~~l~~~~~r~~~~~g~~~~----------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~-~ 588 (676)
..|.+++.+. +...+++..+.|+.+..+... +...... ... ..+...+|++++++.++... . +
T Consensus 143 a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~dva~~~~~l~~~~~~~G 218 (230)
T PRK07041 143 ALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAER---LPA-RRVGQPEDVANAILFLAANGFTTG 218 (230)
T ss_pred HHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhc---CCC-CCCcCHHHHHHHHHHHhcCCCcCC
Confidence 9999998863 223488899999887655310 0111100 011 13456899999999998765 3 3
Q ss_pred ceeEccCCCc
Q 005818 589 GIWNFTNPGV 598 (676)
Q Consensus 589 g~yn~~~~~~ 598 (676)
.+|++.++.+
T Consensus 219 ~~~~v~gg~~ 228 (230)
T PRK07041 219 STVLVDGGHA 228 (230)
T ss_pred cEEEeCCCee
Confidence 4888887754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.4e-12 Score=127.02 Aligned_cols=182 Identities=13% Similarity=0.118 Sum_probs=130.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+++++||||+|.||.+++++|+++|++| ..+++|++|.+++.++++.. ++|++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l 89 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL 89 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3589999999999999999999999764 34578999999998888753 68999
Q ss_pred EECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+||..... ..+...++.+..+++|+.++.++++++... +.++|++||...+...
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 152 (253)
T PRK08993 90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG----------------- 152 (253)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----------------
Confidence 9999964211 112233556688999999999999987542 2468888887655311
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhc-------CceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY-------NKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~v~D~a~~~ 579 (676)
.....|+.+|...|.+.+.+.. ..++++..++|+.+..+.. ..+... ...+. ..-+.-.+|+++.+
T Consensus 153 -~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~--~~~~~~~~~~~~~~~~~p-~~r~~~p~eva~~~ 228 (253)
T PRK08993 153 -IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT--QQLRADEQRSAEILDRIP-AGRWGLPSDLMGPV 228 (253)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch--hhhccchHHHHHHHhcCC-CCCCcCHHHHHHHH
Confidence 1124699999999999988632 3689999999999875521 110000 00111 12356679999999
Q ss_pred HHHHhcC
Q 005818 580 VEMAKRN 586 (676)
Q Consensus 580 ~~~~~~~ 586 (676)
+.++...
T Consensus 229 ~~l~s~~ 235 (253)
T PRK08993 229 VFLASSA 235 (253)
T ss_pred HHHhCcc
Confidence 9988653
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2e-12 Score=128.40 Aligned_cols=195 Identities=14% Similarity=0.100 Sum_probs=133.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCc-e------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIP-F------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~-v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||+.++++|+++|++ | .++.+|+++++++.++++.+ ++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRL 85 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999987 4 23678999999888887754 57
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||....+. .+...+..+..+++|+.++.++++++.+. + .++|++||...+++
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--------------- 150 (260)
T PRK06198 86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG--------------- 150 (260)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC---------------
Confidence 99999999652111 11123334567899999999999887542 2 35777777665531
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH-HHHH--------HHhcCceeccCCCccchhh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-FITK--------ISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~~~~--------~~~~~~~~~~~~~~~~v~D 574 (676)
....+.|+.+|...|.+++.+. ...++++..++|+.++++.. .+.. +............+.+.+|
T Consensus 151 ---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T PRK06198 151 ---QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDE 227 (260)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHH
Confidence 1223679999999999988753 34579999999999987632 1110 0000000001124678999
Q ss_pred HHHHHHHHHhcC---CCc-eeEccCC
Q 005818 575 LLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
++++++.++... ..| ++++.++
T Consensus 228 ~a~~~~~l~~~~~~~~~G~~~~~~~~ 253 (260)
T PRK06198 228 VARAVAFLLSDESGLMTGSVIDFDQS 253 (260)
T ss_pred HHHHHHHHcChhhCCccCceEeECCc
Confidence 999999987543 223 5665553
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-12 Score=127.05 Aligned_cols=181 Identities=15% Similarity=0.113 Sum_probs=128.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||.+++++|+++|++| ..+.+|++|++++.++++.+ ++|+
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 89 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV 89 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999754 35678999999988877653 5799
Q ss_pred EEECccccC-CCCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTG-RPNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~-~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||... .|..+...++....+++|+.++..+++++... + .++|++||..... +
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~ 151 (254)
T PRK08085 90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL------------------G 151 (254)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc------------------C
Confidence 999999641 11112223455678999999999998887652 2 4677887754321 1
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H-----HHHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F-----ITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~-----~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.+|...|.+++.+.. ..++++..++|+.+..+.. . +....... .. ...+...+|++.++
T Consensus 152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~--~p-~~~~~~~~~va~~~ 228 (254)
T PRK08085 152 RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKR--TP-AARWGDPQELIGAA 228 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhc--CC-CCCCcCHHHHHHHH
Confidence 12346799999999999998743 3589999999999987631 0 01111111 11 12466789999999
Q ss_pred HHHHhcC
Q 005818 580 VEMAKRN 586 (676)
Q Consensus 580 ~~~~~~~ 586 (676)
+.++...
T Consensus 229 ~~l~~~~ 235 (254)
T PRK08085 229 VFLSSKA 235 (254)
T ss_pred HHHhCcc
Confidence 8888653
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.6e-13 Score=130.34 Aligned_cols=148 Identities=16% Similarity=0.165 Sum_probs=109.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhc---------cCCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQN---------VKPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~---------~~~d~ 435 (676)
||+++||||+|+||++++++|+++|++| .++++|+.|.++++++++. .++|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 5789999999999999999999999764 4467899999988885543 25799
Q ss_pred EEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+||+|+.... +......++....+++|+.++..+++.+.+. + .++|++||...+.
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 142 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN------------------ 142 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC------------------
Confidence 9999996521 1111123445677899999988777766542 2 4778888865441
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc--CeEEEEeeecccCCCCCh
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD--NVCTLRVRMPISSDLNNP 549 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~--~~~~l~~~~~r~~~~~g~ 549 (676)
+..+...|+.+|...|.+++.+. ...++++..++|+.+-.+
T Consensus 143 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 143 AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 22344679999999999998764 346899999999888655
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-12 Score=126.83 Aligned_cols=209 Identities=14% Similarity=0.053 Sum_probs=135.5
Q ss_pred eEEEEcCCchhHHHHHHHHHHc--CCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----C
Q 005818 9 NILITGAAGFIASHVCNRLIGN--YPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----E 80 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~--g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~ 80 (676)
.||||||+|.||.++++.|+++ ..+++|++.+|...... .+.+.......++.++.+|+.|++++++++.. .
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 5899999999999999999972 12688888888642111 01111111233688899999999988776532 1
Q ss_pred -----CCCEEEEccccCCcC---C----cCCChHHHHHHHHHHHHHHHHHHHHc-----CCCceEEEEecccccCCCCCC
Q 005818 81 -----KIDTIMHFAAQTHVD---N----SFGNSFEFTKNNIYGTHVLLEACKIT-----GQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 81 -----~~d~Vih~a~~~~~~---~----~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~~v~~SS~~vyg~~~~~ 143 (676)
+.|+|||+||..... . ..+++...+++|+.++..+.+++... +.-.++|++||...+.+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~-- 159 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK-- 159 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC--
Confidence 236999999974321 1 12345678999999988887665432 1125899999975543221
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH-----HHHHHHHHCCCCce
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----PKFILLAMKGKPLP 215 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~-----~~~~~~~~~~~~~~ 215 (676)
....|+.+|...+.+++.++.+ .++.+..+.||.+-.+... .+. +.+........ +
T Consensus 160 ------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~--~ 223 (256)
T TIGR01500 160 ------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ--QVREESVDPDMRKGLQELK--A 223 (256)
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH--HHHHhcCChhHHHHHHHHH--h
Confidence 1346999999999999987766 3799999999998654210 000 00111111100 0
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
...+...+|+|.+++.++++
T Consensus 224 -------~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 224 -------KGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred -------cCCCCCHHHHHHHHHHHHhc
Confidence 01266789999999999864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=127.29 Aligned_cols=193 Identities=17% Similarity=0.090 Sum_probs=131.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGID 88 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999765 35678999999988887643 689
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
++||+||...... .+...++....+++|+.++..+++++... + .+++++||......
T Consensus 89 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------- 152 (253)
T PRK05867 89 IAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------------- 152 (253)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC----------------
Confidence 9999999652111 11122344566799999999999987542 2 35666666432100
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-----HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
........|+.+|...+.+++.+.+ ..++++..+.|+.+..+. ......... .. ...+...+|+|+++
T Consensus 153 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~---~~-~~r~~~p~~va~~~ 228 (253)
T PRK05867 153 NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPK---IP-LGRLGRPEELAGLY 228 (253)
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhc---CC-CCCCcCHHHHHHHH
Confidence 0011235799999999999988743 358999999999887652 111111111 11 12466789999999
Q ss_pred HHHHhcC---CCc-eeEccCC
Q 005818 580 VEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~ 596 (676)
+.++... .+| ++.+.++
T Consensus 229 ~~L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 229 LYLASEASSYMTGSDIVIDGG 249 (253)
T ss_pred HHHcCcccCCcCCCeEEECCC
Confidence 9988643 234 5665554
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=131.12 Aligned_cols=184 Identities=15% Similarity=0.107 Sum_probs=126.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++|+||||+|.||++++++|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 87 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV 87 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999754 35678999999998887642 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||...... .+...++.+..+++|+.++.++.+++. +.+ .++|++||...+. +
T Consensus 88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~------------------~ 149 (330)
T PRK06139 88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA------------------A 149 (330)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC------------------C
Confidence 999999652111 111223345678999999999888764 233 4677777765442 1
Q ss_pred CCCCCchhhhHHHHHHHHHHc----cCeEEEEeeecccCCCCChHHH-HHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 510 NFTGSFYSKTKAMVEELLKEY----DNVCTLRVRMPISSDLNNPRNF-ITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~----~~~~~l~~~~~r~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
.+....|+.||...+.+.+.+ .+..+++++.+.|+.+..|... ..... .. .......+...+|+|++++.+++
T Consensus 150 ~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~-~~-~~~~~~~~~~pe~vA~~il~~~~ 227 (330)
T PRK06139 150 QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT-GR-RLTPPPPVYDPRRVAKAVVRLAD 227 (330)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc-cc-cccCCCCCCCHHHHHHHHHHHHh
Confidence 122367999999766666554 3334899999999999876311 00000 11 11111245678999999999998
Q ss_pred cCCC
Q 005818 585 RNLS 588 (676)
Q Consensus 585 ~~~~ 588 (676)
++..
T Consensus 228 ~~~~ 231 (330)
T PRK06139 228 RPRA 231 (330)
T ss_pred CCCC
Confidence 7643
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=132.56 Aligned_cols=199 Identities=14% Similarity=0.032 Sum_probs=134.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCC--HHHHHHH---Hcc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVAS--ADLVHFI---LLT 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d--~~~~~~~---~~~ 79 (676)
++.++||||||+||.++++.|+++ |++|++.+|+..... .+.+.......++..+.+|+.+ .+.++++ +..
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 589999999999999999999999 678888888642211 0011111112357788999985 3434333 323
Q ss_pred CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||.... +.+.++....+++|+.++.++.+++.. .+ ..++|++||...+....
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~-------- 201 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPS-------- 201 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC--------
Confidence 357799999997532 223344567889999999999887653 23 46899999976542110
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
......|+.+|...+.+.+.++.+. |++++++.||.+-.+.... ..... ..
T Consensus 202 ----~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------------~~~~~----------~~ 255 (320)
T PLN02780 202 ----DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------------RRSSF----------LV 255 (320)
T ss_pred ----CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------------cCCCC----------CC
Confidence 0013569999999999998887764 8999999999986553210 00000 13
Q ss_pred eeHHHHHHHHHHHHhc
Q 005818 227 LYCEDVAEAFDTILHK 242 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~ 242 (676)
...+++|+.++..+..
T Consensus 256 ~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 256 PSSDGYARAALRWVGY 271 (320)
T ss_pred CCHHHHHHHHHHHhCC
Confidence 4678999999988853
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=132.62 Aligned_cols=160 Identities=13% Similarity=0.037 Sum_probs=115.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
++++++||||+|+||.+++++|+++|++| .++.+|+.|.++++++++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 34689999999999999999999999754 45778999999988887653
Q ss_pred CCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHH----HcCCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 432 KPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCR----ENGLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
++|++||+||....+......+..+..+.+|+.|+..+.+.+. +...++|++||...+.+..... . ..+.
T Consensus 93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~-----~-~~~~ 166 (313)
T PRK05854 93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWD-----D-LNWE 166 (313)
T ss_pred CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcc-----c-cccc
Confidence 5799999999763222122345566789999999887777665 3345888888875543211100 0 1122
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC-----eEEEEeeecccCCCCC
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNN 548 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g 548 (676)
.+..+...|+.||...+.+.+.+.+ ..++++..+.|+.+..
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 2344557899999999999887642 3478999999988753
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.2e-12 Score=127.11 Aligned_cols=182 Identities=16% Similarity=0.145 Sum_probs=125.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++++||||+|+||++++++|+++|++| .++.+|++++++++++++.. ++|+
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3689999999999999999999999754 35678999999988887754 6899
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|||+||...... .....++.+..+++|+.++..+++++... ..++|++||+.... .+
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~ 148 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM-----------------VA 148 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------------cC
Confidence 999999642111 11122334467899999999999987642 24677777753210 01
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcC-------------ceeccCCCccchh
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN-------------KVVNIPNSMTILD 573 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~v~ 573 (676)
......|+.+|...|.+++.+.+ ..++++..++|+.+..+.. ..+.... .... ...+...+
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~ 225 (263)
T PRK08226 149 DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA--ESIARQSNPEDPESVLTEMAKAIP-LRRLADPL 225 (263)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHH--HhhhhhccCCCcHHHHHHHhccCC-CCCCCCHH
Confidence 12235799999999999888642 3479999999999987731 1111000 0000 11345788
Q ss_pred hHHHHHHHHHhc
Q 005818 574 ELLPISVEMAKR 585 (676)
Q Consensus 574 D~a~~~~~~~~~ 585 (676)
|++++++.++..
T Consensus 226 ~va~~~~~l~~~ 237 (263)
T PRK08226 226 EVGELAAFLASD 237 (263)
T ss_pred HHHHHHHHHcCc
Confidence 999988887753
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.8e-12 Score=126.49 Aligned_cols=187 Identities=13% Similarity=0.077 Sum_probs=129.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~----~~d~V 436 (676)
+++++||||+|+||..++++|+++|++| .++.+|++|.+++.++++.. ++|+|
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l 84 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVL 84 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence 3589999999999999999999999765 35678999999888776643 57999
Q ss_pred EECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||.... +..+...++....+++|+.|+.++++++... + .+++++||...+.+ .
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------------~ 146 (263)
T PRK09072 85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG------------------Y 146 (263)
T ss_pred EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC------------------C
Confidence 999996521 0111223344567899999999999988642 2 46677777543311 1
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~ 587 (676)
.....|+.+|...+.+++.+. ...++++..+.|+.+..+..- ... ....-.....+..++|+|++++.++++..
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~--~~~-~~~~~~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 147 PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS--EAV-QALNRALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh--hhc-ccccccccCCCCCHHHHHHHHHHHHhCCC
Confidence 123569999999888887753 245799999999887654211 110 00000112245678999999999998775
Q ss_pred Ccee
Q 005818 588 SGIW 591 (676)
Q Consensus 588 ~g~y 591 (676)
.++|
T Consensus 224 ~~~~ 227 (263)
T PRK09072 224 AERW 227 (263)
T ss_pred CEEe
Confidence 5543
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.8e-12 Score=124.34 Aligned_cols=190 Identities=12% Similarity=0.117 Sum_probs=130.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||+++++.|+++|++| .++++|++|++.+.++++.+ ++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 579999999999999999999999754 35778999999988877654 5799
Q ss_pred EEECccccC-CCCcchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTG-RPNVDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~-~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||... .+..+...++....+++|+.++.++++++.+ .+ .+++++||...+.
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------------ 143 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD------------------ 143 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc------------------
Confidence 999998532 1112233444567899999999999999843 22 3677776653221
Q ss_pred CCCCCCchhhhHHHHHHHHHHc----cCeEEEEeeecccCCCCChH---------HHHHHHHhcCceeccCCCccchhhH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEY----DNVCTLRVRMPISSDLNNPR---------NFITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~----~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+......|+.+|...+.+++.+ .+.+++++..++|+.+..+. .+...+... .. ...+...+|+
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~v 219 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS---VP-LGRLGTPEEI 219 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc---CC-CCCCCCHHHH
Confidence 1112256999999999998874 33468999999999887431 111111111 11 1246678899
Q ss_pred HHHHHHHHhcC---CCc-eeEccCC
Q 005818 576 LPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+.++..++... .+| ++.+.++
T Consensus 220 a~~~~~l~~~~~~~~~g~~~~~~gg 244 (252)
T PRK07677 220 AGLAYFLLSDEAAYINGTCITMDGG 244 (252)
T ss_pred HHHHHHHcCccccccCCCEEEECCC
Confidence 99888877543 233 5555443
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.4e-12 Score=126.11 Aligned_cols=192 Identities=14% Similarity=0.107 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++|+||||+|+||.+++++|+++|++| ..+.+|++|.+++.++++.+ ++|+
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 87 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY 87 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999644 45679999999888887765 6899
Q ss_pred EEECccccCCC--CcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGRP--NVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||....+ ..+...++....+++|+.++..+++++. +.+ .+++++||...+..
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----------------- 150 (253)
T PRK06172 88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA----------------- 150 (253)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-----------------
Confidence 99999964211 1222345566778999999988776543 233 46778777655421
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCc-e------eccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-V------VNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-~------~~~~~~~~~v~D~a~~ 578 (676)
......|+.+|...+.+++.+.. ..++++..+.|+.+..+. ........+ . ......+...+|+++.
T Consensus 151 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~ 227 (253)
T PRK06172 151 -APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM--FRRAYEADPRKAEFAAAMHPVGRIGKVEEVASA 227 (253)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh--hhhhcccChHHHHHHhccCCCCCccCHHHHHHH
Confidence 12346799999999999888642 357999999999887552 111110000 0 0001235578999999
Q ss_pred HHHHHhcC---CCc-eeEccCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~ 596 (676)
++.++... .+| .+++.++
T Consensus 228 ~~~l~~~~~~~~~G~~i~~dgg 249 (253)
T PRK06172 228 VLYLCSDGASFTTGHALMVDGG 249 (253)
T ss_pred HHHHhCccccCcCCcEEEECCC
Confidence 99888653 234 5566554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-12 Score=142.63 Aligned_cols=198 Identities=14% Similarity=0.066 Sum_probs=132.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
.+++|+||||+|+||++++++|+++|++| ..+.+|++|++++.++++.+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35789999999999999999999999765 24578999999999888754
Q ss_pred CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----Hc--CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----EN--GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|+|||+||...... .....++....+++|+.+...++..+. +. +.++|++||...+.
T Consensus 493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~-------------- 558 (676)
T TIGR02632 493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY-------------- 558 (676)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--------------
Confidence 5799999999652111 111223345668899999887765543 33 34788888865432
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCC-ChHH----HH-HHHHh-cC------c---eecc
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLN-NPRN----FI-TKISR-YN------K---VVNI 565 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~-g~~~----~~-~~~~~-~~------~---~~~~ 565 (676)
+......|+.||...+.+++.+.. ..++++..+.|+.+. +... +. .+... +. . .-..
T Consensus 559 ----~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 634 (676)
T TIGR02632 559 ----AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL 634 (676)
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCC
Confidence 112246799999999999988632 457999999998875 2211 10 00000 00 0 0001
Q ss_pred CCCccchhhHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 566 PNSMTILDELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 566 ~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
...+++.+|+|+++..++... .+| ++++.++..
T Consensus 635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 124678999999999887643 234 777777644
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.5e-13 Score=134.17 Aligned_cols=160 Identities=14% Similarity=-0.000 Sum_probs=107.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++|+||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.+ +
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 95 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPR 95 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence 4689999999999999999999999754 35678999999988887653 5
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhh----HHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVG----TLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g----~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|+|||+||.... ......++.+..+++|+.| +..+++.+++.+ .++|++||...+......... ....
T Consensus 96 iD~li~nAg~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~-----~~~~ 169 (306)
T PRK06197 96 IDLLINNAGVMYT-PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDD-----LQWE 169 (306)
T ss_pred CCEEEECCccccC-CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccc-----cCcc
Confidence 7999999996521 1112234456778999999 556666666554 477888877543211110000 1111
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEe--eecccCCCCCh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRV--RMPISSDLNNP 549 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~--~~~r~~~~~g~ 549 (676)
.+..+...|+.||+..+.+.+.+.+. .++++ ..+.|+.+..+
T Consensus 170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 23345578999999999999876432 24443 34467776543
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.4e-12 Score=126.27 Aligned_cols=192 Identities=15% Similarity=0.096 Sum_probs=130.2
Q ss_pred ccEEEEEcCCc--chhHHHHHHHHHcCCce-----------------------------------eeccccCCChHHHHH
Q 005818 384 FLKFLIYGRTG--WIGGLLSKICEKKGIPF-----------------------------------EYGKGRLENRSQLLA 426 (676)
Q Consensus 384 ~~~vlitG~~G--~iG~~l~~~L~~~g~~v-----------------------------------~~~~~Dl~d~~~~~~ 426 (676)
+++|+||||+| .||.+++++|+++|++| .++.+|+++.+++.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 35799999996 69999999999988643 445678999888877
Q ss_pred Hhhcc-----CCCEEEECccccC-CCCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCC
Q 005818 427 DIQNV-----KPTHVFNAAGVTG-RPNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKH 495 (676)
Q Consensus 427 ~~~~~-----~~d~Vih~a~~~~-~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~ 495 (676)
+++.. ++|+|||+||... .+......++.+..+++|+.++..+++++... ..+++++||...+.
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----- 159 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG----- 159 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC-----
Confidence 76653 5899999998641 11111223445677899999999999988643 23678887765442
Q ss_pred CCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCceeccCCCcc
Q 005818 496 PEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMT 570 (676)
Q Consensus 496 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~ 570 (676)
|......|+.+|...|.+++.+.+ ..++++..++|+.+..+. ..+........ ....+.
T Consensus 160 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~---~~~~~~ 223 (256)
T PRK12748 160 -------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKF---PQGRVG 223 (256)
T ss_pred -------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccC---CCCCCc
Confidence 112336799999999999887632 358999999998876542 11111111111 112244
Q ss_pred chhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 571 ILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
-.+|+++++..++... ..| ++++.++
T Consensus 224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 5689999988877642 224 6777654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.7e-12 Score=126.87 Aligned_cols=182 Identities=17% Similarity=0.107 Sum_probs=126.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|.||.+++++|+++|++| .++.+|++|+++++++++.+ ++|+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI 86 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999754 35678999999888887754 6899
Q ss_pred EEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||..+. +..+...++....+++|+.++..+.+++. +.+ .++|++||...+..
T Consensus 87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------- 149 (254)
T PRK07478 87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------------- 149 (254)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-----------------
Confidence 9999996421 11122234456779999998887766543 333 46778877654310
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HH-----HHHHHhcCceeccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NF-----ITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+...|+.||...+.+++.+.. ..++++..+.|+.+..+. .+ ........ .....+...+|+++.
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~va~~ 226 (254)
T PRK07478 150 GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL---HALKRMAQPEEIAQA 226 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc---CCCCCCcCHHHHHHH
Confidence 112346799999999999988643 357999999999987652 00 00011100 011235578999999
Q ss_pred HHHHHhcC
Q 005818 579 SVEMAKRN 586 (676)
Q Consensus 579 ~~~~~~~~ 586 (676)
++.++..+
T Consensus 227 ~~~l~s~~ 234 (254)
T PRK07478 227 ALFLASDA 234 (254)
T ss_pred HHHHcCch
Confidence 99988653
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-12 Score=125.54 Aligned_cols=183 Identities=11% Similarity=0.092 Sum_probs=129.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+++++||||+|+||++++++|+++|++| ..+.+|++|++++.++++.+ ++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999999998754 46678999999988877654 57
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... +..+...++.+..+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------- 153 (256)
T PRK06124 90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA---------------- 153 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC----------------
Confidence 999999996521 011122344557789999999999977754 33 46777777654311
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H-----HHHHHhcCceeccCCCccchhhHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F-----ITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~-----~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
......|+.+|...+.+++.+.. ..++++..++|+.+..+.. . +....... . ....+.+.+|++.
T Consensus 154 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~a~ 228 (256)
T PRK06124 154 --RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--T-PLGRWGRPEEIAG 228 (256)
T ss_pred --CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--C-CCCCCCCHHHHHH
Confidence 11236799999999999887532 3479999999999987631 1 01111111 1 1235788999999
Q ss_pred HHHHHHhcC
Q 005818 578 ISVEMAKRN 586 (676)
Q Consensus 578 ~~~~~~~~~ 586 (676)
+++.++...
T Consensus 229 ~~~~l~~~~ 237 (256)
T PRK06124 229 AAVFLASPA 237 (256)
T ss_pred HHHHHcCcc
Confidence 999998764
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.9e-12 Score=125.13 Aligned_cols=190 Identities=12% Similarity=0.058 Sum_probs=127.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|++||+|
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 82 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA 82 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence 589999999999999999999999865 34678999999888877664 479999999
Q ss_pred cccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc----C---CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 441 GVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN----G---LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~---~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
|..... ......++.+..+++|+.++..+.+++... + .++|++||..... +...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~------------------~~~~ 144 (236)
T PRK06483 83 SDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK------------------GSDK 144 (236)
T ss_pred ccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc------------------CCCC
Confidence 964111 111123445677899999999887776542 2 3567776643220 1122
Q ss_pred CCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCC-ChH--HHH-HHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 513 GSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLN-NPR--NFI-TKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~-g~~--~~~-~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
...|+.||...|.+++.+.+.+ .+++..+.|+.+. +.. ... ...... .. . .-+...+|+++++..++...
T Consensus 145 ~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~-~~--~-~~~~~~~~va~~~~~l~~~~ 220 (236)
T PRK06483 145 HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAK-SL--L-KIEPGEEEIIDLVDYLLTSC 220 (236)
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhcc-Cc--c-ccCCCHHHHHHHHHHHhcCC
Confidence 3579999999999998864322 4899999998863 211 111 111111 11 1 12446799999999988643
Q ss_pred -CCc-eeEccCC
Q 005818 587 -LSG-IWNFTNP 596 (676)
Q Consensus 587 -~~g-~yn~~~~ 596 (676)
..| ++.+.++
T Consensus 221 ~~~G~~i~vdgg 232 (236)
T PRK06483 221 YVTGRSLPVDGG 232 (236)
T ss_pred CcCCcEEEeCcc
Confidence 233 5555544
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=125.80 Aligned_cols=182 Identities=12% Similarity=0.035 Sum_probs=123.4
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~----~~ 433 (676)
..++++||||+|+||++++++|+++|++| ..+.+|++|.+++.++++.+ ++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999644 35678999998888877653 57
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------------CCcEEEeecCeeeecCCCCCCCCC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------------GLLMMNYATGCIFEYDAKHPEGTG 500 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------------~~~~v~~sS~~v~~~~~~~~~~~~ 500 (676)
|+|||+||...... .+...++....+++|+.++.++++++..+ ..++|++||...+..
T Consensus 91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 161 (306)
T PRK07792 91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG--------- 161 (306)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC---------
Confidence 99999999752111 11223455677899999999999987531 136777777654311
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCcee-ccCCCccchhhHH
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVV-NIPNSMTILDELL 576 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~v~D~a 576 (676)
......|+.+|...+.+++.+.. .+++++..+.|+. .- .+...+....... .....+...+|++
T Consensus 162 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t--~~~~~~~~~~~~~~~~~~~~~~pe~va 229 (306)
T PRK07792 162 ---------PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RT--AMTADVFGDAPDVEAGGIDPLSPEHVV 229 (306)
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CC--chhhhhccccchhhhhccCCCCHHHHH
Confidence 12235699999999999887642 4689999888862 11 1111111110000 1112456789999
Q ss_pred HHHHHHHhc
Q 005818 577 PISVEMAKR 585 (676)
Q Consensus 577 ~~~~~~~~~ 585 (676)
.++..++..
T Consensus 230 ~~v~~L~s~ 238 (306)
T PRK07792 230 PLVQFLASP 238 (306)
T ss_pred HHHHHHcCc
Confidence 999888754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.8e-12 Score=125.57 Aligned_cols=195 Identities=11% Similarity=0.069 Sum_probs=132.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.+ +
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 86 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP 86 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3689999999999999999999999765 25678999999988887753 5
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|++||+||.... +......++.+..+++|+.++..+++++.. .+ .++|++||...+.
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 150 (260)
T PRK07063 87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK---------------- 150 (260)
T ss_pred CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc----------------
Confidence 7999999996411 011122344567789999999999988753 22 4788888865431
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHHH------HHh-cCceeccCCCccchhh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITK------ISR-YNKVVNIPNSMTILDE 574 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~------~~~-~~~~~~~~~~~~~v~D 574 (676)
+..+...|+.+|...+.+++.+. ...++++..+.|+.+..+.. +... ... ...... ..-+...+|
T Consensus 151 --~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~ 227 (260)
T PRK07063 151 --IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP-MKRIGRPEE 227 (260)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC-CCCCCCHHH
Confidence 11223569999999999998863 23589999999998876531 1000 000 000001 123556899
Q ss_pred HHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 575 LLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
++.+++.++... ..| ...+.++.
T Consensus 228 va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 228 VAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred HHHHHHHHcCccccccCCcEEEECCCe
Confidence 999999988653 234 55555443
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-12 Score=126.34 Aligned_cols=182 Identities=11% Similarity=0.113 Sum_probs=127.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||.+++++|+++|++| .++.+|++|++++.++++.+ ++|+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999765 34568999999988887764 5799
Q ss_pred EEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 436 VFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 436 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
|||+|+.... +..+...++....+++|+.++.++++++.. .+.+++++||...+. +.
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~------------------~~ 151 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV------------------PM 151 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc------------------CC
Confidence 9999984311 111222344557789999999999998764 234778887754331 12
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhc-------CceeccCCCccchhhHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRY-------NKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~v~D~a~~~~ 580 (676)
.....|+.+|...|.+++.+. ...++++..++|+.+.+...+. ..... ..... ...+....|++++++
T Consensus 152 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~ 229 (264)
T PRK07576 152 PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA-RLAPSPELQAAVAQSVP-LKRNGTKQDIANAAL 229 (264)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh-hcccCHHHHHHHHhcCC-CCCCCCHHHHHHHHH
Confidence 234679999999999998863 2357999999999886432111 11000 00111 124567899999999
Q ss_pred HHHhcC
Q 005818 581 EMAKRN 586 (676)
Q Consensus 581 ~~~~~~ 586 (676)
.++..+
T Consensus 230 ~l~~~~ 235 (264)
T PRK07576 230 FLASDM 235 (264)
T ss_pred HHcChh
Confidence 998753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.2e-12 Score=125.47 Aligned_cols=196 Identities=17% Similarity=0.145 Sum_probs=131.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||+|+||++++++|+++|++| ..+.+|++|++++.++++.+ ++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 87 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL 87 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999654 35678999999888877654 47
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||....+. .+...++.+..+++|+.++..+++++.. .+ .++|++||...+...
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 152 (254)
T PRK06114 88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN--------------- 152 (254)
T ss_pred CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------------
Confidence 99999999752111 1122344567789999999888777643 33 467888776543211
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH----HHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
+..+...|+.+|...+.+++.+. ...++++..+.|+.+..+.. .............. ..+...+|++.+++
T Consensus 153 -~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~~~ 230 (254)
T PRK06114 153 -RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM-QRMAKVDEMVGPAV 230 (254)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence 11123579999999999988864 34689999999998876531 00000000011111 23556899999999
Q ss_pred HHHhcC---CCc-eeEccCC
Q 005818 581 EMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 581 ~~~~~~---~~g-~yn~~~~ 596 (676)
.++... ..| ++.+.++
T Consensus 231 ~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 231 FLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred HHcCccccCcCCceEEECcC
Confidence 988643 234 5555443
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.8e-12 Score=126.35 Aligned_cols=183 Identities=20% Similarity=0.186 Sum_probs=126.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||+++++.|+++|++| .++++|+.|.+++.++++.. ++|+
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999754 35678999998888777643 5799
Q ss_pred EEECccccCCCC----------------cchhccchhhHHhhhhhhHHHHHHHHH----Hc-CCcEEEeecCeeeecCCC
Q 005818 436 VFNAAGVTGRPN----------------VDWCETHKPETIRTNVVGTLTLADVCR----EN-GLLMMNYATGCIFEYDAK 494 (676)
Q Consensus 436 Vih~a~~~~~~~----------------~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~-~~~~v~~sS~~v~~~~~~ 494 (676)
|||+||...... .+...++....+++|+.++..+++++. +. +.++|++||...+.
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~---- 166 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT---- 166 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC----
Confidence 999999642111 011233455778999999987766553 33 35788888876552
Q ss_pred CCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHH-----hcCcee-
Q 005818 495 HPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKIS-----RYNKVV- 563 (676)
Q Consensus 495 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~-----~~~~~~- 563 (676)
+..+...|+.+|...+.+++.+. ...++++..+.|+.+..+. .++..-. ......
T Consensus 167 --------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 232 (278)
T PRK08277 167 --------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILA 232 (278)
T ss_pred --------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhc
Confidence 22334679999999999998863 3358999999999998773 1110000 000000
Q ss_pred -ccCCCccchhhHHHHHHHHHhc
Q 005818 564 -NIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 564 -~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.....+.-.+|++++++.++..
T Consensus 233 ~~p~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 233 HTPMGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred cCCccCCCCHHHHHHHHHHHcCc
Confidence 0112455689999999998865
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.5e-12 Score=126.14 Aligned_cols=195 Identities=15% Similarity=0.108 Sum_probs=133.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||.+++++|+++|++| ..+++|++|+++++++++.+ ++|
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVID 89 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 3589999999999999999999999754 45789999999988887753 579
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.... |..+...++....+++|+.++..+++++.. .+ .++|++||.....
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------ 151 (265)
T PRK07097 90 ILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL------------------ 151 (265)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC------------------
Confidence 99999997521 111233455567789999999988887754 23 4777877753221
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH-HHHH-HhcC--c------eeccCCCccchhhH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF-ITKI-SRYN--K------VVNIPNSMTILDEL 575 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~-~~~~-~~~~--~------~~~~~~~~~~v~D~ 575 (676)
+..+...|+.+|...+.+++.+.+ ..++++..++|+.+..+..- .... ..+. . .......+...+|+
T Consensus 152 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 231 (265)
T PRK07097 152 GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDL 231 (265)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHH
Confidence 112346799999999999988743 35899999999999876311 0000 0000 0 00011245668999
Q ss_pred HHHHHHHHhcC---CCc-eeEccCC
Q 005818 576 LPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+..++.++... ..| .+.+.++
T Consensus 232 a~~~~~l~~~~~~~~~g~~~~~~gg 256 (265)
T PRK07097 232 AGPAVFLASDASNFVNGHILYVDGG 256 (265)
T ss_pred HHHHHHHhCcccCCCCCCEEEECCC
Confidence 99999988753 234 4454443
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.1e-12 Score=126.12 Aligned_cols=181 Identities=13% Similarity=0.077 Sum_probs=125.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------------eeccccCCChHHHHHHhhcc--
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------------EYGKGRLENRSQLLADIQNV-- 431 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------------~~~~~Dl~d~~~~~~~~~~~-- 431 (676)
++++||||+|+||.++++.|+++|++| ..+.+|+++++++.++++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 86 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE 86 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 589999999999999999999999765 13458999999988887754
Q ss_pred ---CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCC
Q 005818 432 ---KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 432 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
++|+|||+||...... .....++.+..+++|+.++.++++++... +.+++++||.... .+
T Consensus 87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----~~------ 155 (273)
T PRK08278 87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL-----DP------ 155 (273)
T ss_pred HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-----cc------
Confidence 6899999999652111 12223445677899999999999999643 2456666654211 00
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCC-CCChHHHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSD-LNNPRNFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
....+.+.|+.||...|.+++.+.. ..++++..+.|+. +..+ +......... ....+.-.+|++++
T Consensus 156 -----~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--~~~~~~~~~~---~~~~~~~p~~va~~ 225 (273)
T PRK08278 156 -----KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--AVRNLLGGDE---AMRRSRTPEIMADA 225 (273)
T ss_pred -----cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--HHHhcccccc---cccccCCHHHHHHH
Confidence 0113447899999999999998743 3579999999984 4332 2222211111 11245678999999
Q ss_pred HHHHHhcC
Q 005818 579 SVEMAKRN 586 (676)
Q Consensus 579 ~~~~~~~~ 586 (676)
++.++...
T Consensus 226 ~~~l~~~~ 233 (273)
T PRK08278 226 AYEILSRP 233 (273)
T ss_pred HHHHhcCc
Confidence 99988654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=123.62 Aligned_cols=188 Identities=17% Similarity=0.170 Sum_probs=128.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-CCCEEEECccccC--CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVTG--RP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~--~~ 446 (676)
++++||||+|+||+++++.|+++|++| ..+.+|++++ ++++++.. ++|+|||+||... .+
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD--LEPLFDWVPSVDILCNTAGILDDYKP 83 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH--HHHHHHhhCCCCEEEECCCCCCCCCC
Confidence 589999999999999999999999865 3556787776 44444433 5699999999531 11
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
..+...++.+..+++|+.++.++++++... ..+++++||...+.. ......|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~Y~~sK~ 145 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA------------------GGGGAAYTASKH 145 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC------------------CCCCcccHHHHH
Confidence 122334456678999999999999988642 246778877654421 122356999999
Q ss_pred HHHHHHHHccC---eEEEEeeecccCCCCChHH---HH-----HHHHhcCceeccCCCccchhhHHHHHHHHHhcC---C
Q 005818 522 MVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FI-----TKISRYNKVVNIPNSMTILDELLPISVEMAKRN---L 587 (676)
Q Consensus 522 ~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~-----~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~ 587 (676)
..+.+++.+.. ..++++..++|+.+..+.. +. ..+.... ....+...+|+|++++.++... .
T Consensus 146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~l~s~~~~~~ 221 (235)
T PRK06550 146 ALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARET----PIKRWAEPEEVAELTLFLASGKADYM 221 (235)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccC----CcCCCCCHHHHHHHHHHHcChhhccC
Confidence 99988887642 3589999999999976631 11 1111111 1124667899999999988643 2
Q ss_pred Cc-eeEccCC
Q 005818 588 SG-IWNFTNP 596 (676)
Q Consensus 588 ~g-~yn~~~~ 596 (676)
.| ++.+.++
T Consensus 222 ~g~~~~~~gg 231 (235)
T PRK06550 222 QGTIVPIDGG 231 (235)
T ss_pred CCcEEEECCc
Confidence 34 5555543
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.9e-13 Score=122.43 Aligned_cols=154 Identities=18% Similarity=0.214 Sum_probs=116.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+||||||+|.||..++++|+++| ...|++.+|....+....+. ......++.++++|++++++++++++. .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g-~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRG-ARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-ceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 67888888861111111110 012246789999999999998877732 4
Q ss_pred CCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
++|++||+|+...... +.+++...++.|+.+...+.+++...+ -.++|++||....-+..+
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~-------------- 144 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSPG-------------- 144 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSSTT--------------
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCCC--------------
Confidence 7999999999987322 334556889999999999999888744 689999999766544332
Q ss_pred CChhHHHHHHHHHHHHHHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRS 177 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~ 177 (676)
...|+.+|...+.+++.++++
T Consensus 145 ~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHh
Confidence 235999999999999988765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.6e-12 Score=122.87 Aligned_cols=180 Identities=11% Similarity=0.030 Sum_probs=126.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
++|+||||+|+||+++++.|+++|++| .++++|+++++.++++++.. ++|.+
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~i 85 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGL 85 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999643 56789999999888777653 35999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
||+++.... ......++.+..++.|+.++..+++.+... +.++|++||...... +..+.
T Consensus 86 i~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------------~~~~~ 147 (238)
T PRK05786 86 VVTVGGYVE-DTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-----------------ASPDQ 147 (238)
T ss_pred EEcCCCcCC-CchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-----------------CCCCc
Confidence 999984311 111122444567899999998888887653 456777777543210 11233
Q ss_pred CchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 514 SFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
..|+.+|...+.+++.+.+ ..+++++.+||+.++++...-.. .+. .......++..+|++++++.++..
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-~~~--~~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN-WKK--LRKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-hhh--hccccCCCCCHHHHHHHHHHHhcc
Confidence 5699999999988877643 34899999999999986311000 000 111122456779999999998865
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-12 Score=127.12 Aligned_cols=177 Identities=10% Similarity=0.077 Sum_probs=121.0
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc--------cccCCCC--CCCCCCeEEEEecCCCHHH
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--------NLKNLNP--SRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--------~~~~~~~--~~~~~~v~~v~~Dl~d~~~ 72 (676)
..++.+++|||||++.||.++++.|++. +++|++.+|..... ..+.+.. .....++..+++|+.|+++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 3456789999999999999999999999 67888888753210 0000000 1112357789999999999
Q ss_pred HHHHHcc-----CCCCEEEEcc-ccCC-----c---CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEeccc
Q 005818 73 VHFILLT-----EKIDTIMHFA-AQTH-----V---DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDE 135 (676)
Q Consensus 73 ~~~~~~~-----~~~d~Vih~a-~~~~-----~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~ 135 (676)
++++++. .++|++||+| +... . +.+.+++...++.|+.+...+.+++... ..-.++|++||..
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~ 161 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT 161 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence 8877643 3699999999 6421 1 1223345567888999888877666431 1125899999843
Q ss_pred c-cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCC
Q 005818 136 V-YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGP 193 (676)
Q Consensus 136 v-yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~ 193 (676)
. ++... ......|+.+|.....+.+.++.+. |+++..+.||.|-.+
T Consensus 162 ~~~~~~~------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 162 AEYNATH------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred ccccCcC------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 3 22111 0113359999999999988777654 799999999988554
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.6e-12 Score=124.35 Aligned_cols=181 Identities=15% Similarity=0.113 Sum_probs=128.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++++||||+|.||+.+++.|+++|++| ..+.+|+++++++.++++.+ +
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 88 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDG 88 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999765 23567999998888777654 5
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||.... +......++.+..+.+|+.++.++++++.. .+ .+++++||...+.
T Consensus 89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~---------------- 152 (257)
T PRK09242 89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT---------------- 152 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC----------------
Confidence 7999999996421 112233455667899999999999998753 33 4678888765442
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+..+.+.|+.+|...+.+++.+. ...++++..+.|+.+..+.. +........+ ..-+...+|+
T Consensus 153 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v 226 (257)
T PRK09242 153 --HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTP----MRRVGEPEEV 226 (257)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCC----CCCCcCHHHH
Confidence 11234679999999999998763 23589999999999887631 1111111111 1124457899
Q ss_pred HHHHHHHHhcC
Q 005818 576 LPISVEMAKRN 586 (676)
Q Consensus 576 a~~~~~~~~~~ 586 (676)
+.++..++...
T Consensus 227 a~~~~~l~~~~ 237 (257)
T PRK09242 227 AAAVAFLCMPA 237 (257)
T ss_pred HHHHHHHhCcc
Confidence 99998888643
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.5e-12 Score=121.73 Aligned_cols=170 Identities=16% Similarity=0.119 Sum_probs=117.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccc-cCCCCCCCCCCeEEEEecCCCHHHHHHHH-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNL-KNLNPSRLSPNFKFIKGDVASADLVHFIL----- 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~-~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~----- 77 (676)
+..|.|+|||||..||.+++..|+++ |..++++.|.... ... +.+.......++..+++|++|.+++.+++
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 55789999999999999999999999 5655555444321 111 11111222227999999999999988775
Q ss_pred ccCCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 78 LTEKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 78 ~~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
...++|++||.||...... ..++....+++|+.|+-.+.+++- +.+ -.++|.+||...+-..+.
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~------- 159 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF------- 159 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc-------
Confidence 2258999999999976321 222334688999999988887664 222 358999999765433221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEE----EEeeCCcc
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI----TTRGNNVY 191 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~----ilR~~~i~ 191 (676)
...|.+||.+.+.+...++.+..-..+ ++-||.|-
T Consensus 160 -------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~ 198 (282)
T KOG1205|consen 160 -------RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIE 198 (282)
T ss_pred -------ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence 226999999999999998888633222 25566553
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-12 Score=126.40 Aligned_cols=185 Identities=12% Similarity=0.057 Sum_probs=129.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++|+||||+|.||.++++.|+++|++| ..+.+|++|.++++++++.+ ++|+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 88 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV 88 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3589999999999999999999999765 22348999999988877653 6799
Q ss_pred EEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 436 VFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 436 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
|||+||.... +..+...++.+..+++|+.++.++++++.. .+.++|++||...+.. .
T Consensus 89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------------~ 150 (296)
T PRK05872 89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA------------------A 150 (296)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC------------------C
Confidence 9999996521 011122334456789999999999998854 2347888888755421 1
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
.....|+.||...+.+++.+. ...++++..+.|+.+..+.. ....+... .......+...+|+++++
T Consensus 151 ~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~va~~i 228 (296)
T PRK05872 151 PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRAR--LPWPLRRTTSVEKCAAAF 228 (296)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhh--CCCcccCCCCHHHHHHHH
Confidence 223679999999999998763 23578999999988875521 11111110 000112456799999999
Q ss_pred HHHHhcCCC
Q 005818 580 VEMAKRNLS 588 (676)
Q Consensus 580 ~~~~~~~~~ 588 (676)
+.++.....
T Consensus 229 ~~~~~~~~~ 237 (296)
T PRK05872 229 VDGIERRAR 237 (296)
T ss_pred HHHHhcCCC
Confidence 999876543
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.1e-12 Score=124.23 Aligned_cols=183 Identities=14% Similarity=0.112 Sum_probs=123.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcee---------------------------eccccCCChHHHHHHhhcc-----CC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFE---------------------------YGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++||||+|+||.++++.|+++|++|. .+.+|++|++++.++++.+ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 389999999999999999999997651 2567999999888777654 57
Q ss_pred CEEEECccccCCCCc-chhccchhhHHhhhhh----hHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPNV-DWCETHKPETIRTNVV----GTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~----g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||....... +...++....+++|+. ++..++.++++.+. +++++||...+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------- 144 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA---------------- 144 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC----------------
Confidence 999999996521111 1122334566788988 77778888877654 6777777655421
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChHH--HHHHHHhcCc---e--eccCCCccchhhH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRN--FITKISRYNK---V--VNIPNSMTILDEL 575 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~---~--~~~~~~~~~v~D~ 575 (676)
......|+.+|...+.+++.+. +..++++..+.|+.+.+|.. +......... . ......+..++|+
T Consensus 145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 222 (251)
T PRK07069 145 --EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDV 222 (251)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHH
Confidence 1223569999999999988753 23468999999999887742 1111000000 0 0011245679999
Q ss_pred HHHHHHHHhcC
Q 005818 576 LPISVEMAKRN 586 (676)
Q Consensus 576 a~~~~~~~~~~ 586 (676)
+++++.++..+
T Consensus 223 a~~~~~l~~~~ 233 (251)
T PRK07069 223 AHAVLYLASDE 233 (251)
T ss_pred HHHHHHHcCcc
Confidence 99999877643
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.8e-12 Score=122.23 Aligned_cols=175 Identities=14% Similarity=0.061 Sum_probs=125.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc---CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV---KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~---~~d~Vih~a~~ 442 (676)
|++++||||+|+||++++++|+++|++| .++.+|++|.+.++++++.. ++|+|||+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 4589999999999999999999999865 45788999999888865433 58999999996
Q ss_pred cCCC---CcchhccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 443 TGRP---NVDWCETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 443 ~~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
.+.. ......++.+..+++|+.++.++++++.+. +.+++++||...+.+.. +..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~~~~~~~ 145 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------------TGTTGWL 145 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------------cCCCccc
Confidence 5211 111234556788999999999999988752 34677777764332110 1112246
Q ss_pred hhhhHHHHHHHHHHccC-eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 516 YSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
|+.+|...+.+++.+.. ..++++..+.|+.+..+.. +. ..+...++.+..++.++...
T Consensus 146 Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~------~~-------~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 146 YRASKAALNDALRAASLQARHATCIALHPGWVRTDMG------GA-------QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred cHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCC------CC-------CCCCCHHHHHHHHHHHHHhc
Confidence 99999999999988743 3478889999988765421 10 12456788888888877654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-12 Score=125.51 Aligned_cols=184 Identities=13% Similarity=0.163 Sum_probs=123.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc---------C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV---------K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~---------~ 432 (676)
||+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ .
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 3579999999999999999999999754 46789999999988887654 1
Q ss_pred CCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++++||+||.... +..+...++....+++|+.++..+++.+.. .+ .++|++||..++.
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 146 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-------------- 146 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--------------
Confidence 2279999986420 011223344557788999997776665543 22 3677777754431
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChHHHHHHHHhcCce--------eccCCCccc
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISRYNKV--------VNIPNSMTI 571 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~ 571 (676)
+..+...|+.+|...|.+++.+. +..++++..++|+.+..+............. ....+.+..
T Consensus 147 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (251)
T PRK06924 147 ----PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLS 222 (251)
T ss_pred ----CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCC
Confidence 22345779999999999998763 2357999999999887553110000000000 001124677
Q ss_pred hhhHHHHHHHHHhc
Q 005818 572 LDELLPISVEMAKR 585 (676)
Q Consensus 572 v~D~a~~~~~~~~~ 585 (676)
++|+|+.++.++..
T Consensus 223 ~~dva~~~~~l~~~ 236 (251)
T PRK06924 223 PEYVAKALRNLLET 236 (251)
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999888875
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=5e-12 Score=125.89 Aligned_cols=192 Identities=14% Similarity=0.108 Sum_probs=123.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHH----HHHhhc-----
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQL----LADIQN----- 430 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~----~~~~~~----- 430 (676)
.++||||+|+||.+++++|+++|++| ..+.+|++|.+.+ +++++.
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~ 82 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF 82 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence 69999999999999999999999765 1356899998754 333322
Q ss_pred cCCCEEEECccccCCCCc-chhcc-----------chhhHHhhhhhhHHHHHHHHHHcC-----------CcEEEeecCe
Q 005818 431 VKPTHVFNAAGVTGRPNV-DWCET-----------HKPETIRTNVVGTLTLADVCRENG-----------LLMMNYATGC 487 (676)
Q Consensus 431 ~~~d~Vih~a~~~~~~~~-~~~~~-----------~~~~~~~~Nv~g~~~ll~a~~~~~-----------~~~v~~sS~~ 487 (676)
-++|+|||+||....... ..... +....+++|+.++..+++++.... ..+++++|..
T Consensus 83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~ 162 (267)
T TIGR02685 83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM 162 (267)
T ss_pred CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence 157999999996411000 00111 234668999999999998765432 1234444332
Q ss_pred eeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHH---HHHHhcCc
Q 005818 488 IFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI---TKISRYNK 561 (676)
Q Consensus 488 v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~---~~~~~~~~ 561 (676)
.. .+..+...|+.||...|.+++.+.. ..++++..++|+.+..|..+- ......
T Consensus 163 ~~------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~-- 222 (267)
T TIGR02685 163 TD------------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRR-- 222 (267)
T ss_pred cc------------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHH--
Confidence 11 1223456799999999999998643 368999999999876553221 111111
Q ss_pred eeccCCCccchhhHHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 562 VVNIPNSMTILDELLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 562 ~~~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
...........+|++++++.++... ..| .+.+.++.
T Consensus 223 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 223 KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence 1112223457899999999988654 234 55555443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-12 Score=126.60 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=110.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-----CCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~ 443 (676)
.++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.+ ++|+|||+||..
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGIN 88 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 3689999999999999999999999865 35678999999998887754 679999999964
Q ss_pred CCCC----------cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 444 GRPN----------VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 444 ~~~~----------~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
.... .....++.+..+++|+.++..+++++... ..++|++||...+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 151 (266)
T PRK06171 89 IPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG----------------- 151 (266)
T ss_pred CCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC-----------------
Confidence 2100 01223445567899999999999988753 236778877654421
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCC
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLN 547 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~ 547 (676)
......|+.+|...+.+++.+. ...++++..+.|+.+.
T Consensus 152 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 152 -SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 1223679999999999998864 2358999999998774
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=122.72 Aligned_cols=194 Identities=13% Similarity=0.077 Sum_probs=127.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++++||||+++||+++++.|+++|++| .++.+|++|+++++++++.. +
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 87 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDR 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999654 35667999999888887754 5
Q ss_pred CCEEEECccccCC-------CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCC
Q 005818 433 PTHVFNAAGVTGR-------PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTG 500 (676)
Q Consensus 433 ~d~Vih~a~~~~~-------~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~ 500 (676)
+|++||+||..+. |......++....+++|+.+...+.+++.. .+ .++|++||...+.
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 157 (260)
T PRK08416 88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV---------- 157 (260)
T ss_pred ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----------
Confidence 7999999985421 000111233445678888887776665543 22 4788888753221
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHH--HHHHhc-CceeccCCCccch
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFI--TKISRY-NKVVNIPNSMTIL 572 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~--~~~~~~-~~~~~~~~~~~~v 572 (676)
+.+....|+.||...+.+++.+.. ..++++..+.|+.+.-+. .+. ...... ..... ...+...
T Consensus 158 --------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~r~~~p 228 (260)
T PRK08416 158 --------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP-LNRMGQP 228 (260)
T ss_pred --------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC-CCCCCCH
Confidence 112235799999999999988743 358999999998886542 000 000000 00001 1235678
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+|++.+++.++... ..| .+.+.++
T Consensus 229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 229 EDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 99999999988653 234 5555443
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=122.12 Aligned_cols=176 Identities=13% Similarity=0.061 Sum_probs=121.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-Cce--------------------------eeccccCCChHHHHHHhhcc----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKG-IPF--------------------------EYGKGRLENRSQLLADIQNV----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g-~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----~~ 433 (676)
++|+||||+|+||.+++++|+++| ++| .++.+|++|.++++++++.. ++
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i 88 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV 88 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence 589999999999999999999985 433 45678999988876665532 57
Q ss_pred CEEEECccccCCCCcchhccch---hhHHhhhhhhHHH----HHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 434 THVFNAAGVTGRPNVDWCETHK---PETIRTNVVGTLT----LADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~---~~~~~~Nv~g~~~----ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
|++||++|.... ......++ ...+++|+.++.. +++++++.+ .+++++||...+.
T Consensus 89 d~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--------------- 151 (253)
T PRK07904 89 DVAIVAFGLLGD--AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--------------- 151 (253)
T ss_pred CEEEEeeecCCc--hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence 999999986521 11111122 2458999999887 455566554 4778887764321
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHc---cCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+..+...|+.||.....+.+.+ -+..++++..++|+.+..+. ... ... ....+..+|+|+.++.+
T Consensus 152 ---~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~--~~~---~~~----~~~~~~~~~~A~~i~~~ 219 (253)
T PRK07904 152 ---VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM--SAH---AKE----APLTVDKEDVAKLAVTA 219 (253)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecch--hcc---CCC----CCCCCCHHHHHHHHHHH
Confidence 1122356999999998776664 24568999999999998641 111 011 11235789999999999
Q ss_pred HhcCCCc
Q 005818 583 AKRNLSG 589 (676)
Q Consensus 583 ~~~~~~g 589 (676)
++++...
T Consensus 220 ~~~~~~~ 226 (253)
T PRK07904 220 VAKGKEL 226 (253)
T ss_pred HHcCCCE
Confidence 9876444
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=120.83 Aligned_cols=172 Identities=15% Similarity=0.129 Sum_probs=116.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------eccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------YGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
++++++||||+|+||+++++.|+++|++|. .+.+|++|.+++.+.+.. +|++||+||..
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--iDilVnnAG~~ 90 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLAS--LDVLILNHGIN 90 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCC--CCEEEECCccC
Confidence 346899999999999999999999998762 345789999988887765 49999999964
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
. ......++....+++|+.++.++++++... +..+++.||...+ . + .....
T Consensus 91 ~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~-----~-------------~-~~~~~ 149 (245)
T PRK12367 91 P--GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI-----Q-------------P-ALSPS 149 (245)
T ss_pred C--cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc-----C-------------C-CCCch
Confidence 2 112234566788999999999999987542 2223444443211 0 1 12356
Q ss_pred hhhhHHHHHHHH---HHc---cCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCc
Q 005818 516 YSKTKAMVEELL---KEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSG 589 (676)
Q Consensus 516 Y~~sK~~~E~~~---~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g 589 (676)
|+.||...+.+. .++ ....++.+..+.++.+..+. .+ ...+..+|+|+.++.+++++...
T Consensus 150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~---------~~-----~~~~~~~~vA~~i~~~~~~~~~~ 215 (245)
T PRK12367 150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL---------NP-----IGIMSADFVAKQILDQANLGLYL 215 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc---------Cc-----cCCCCHHHHHHHHHHHHhcCCce
Confidence 999999976443 111 13467777777776653221 00 12456899999999998776444
Q ss_pred ee
Q 005818 590 IW 591 (676)
Q Consensus 590 ~y 591 (676)
++
T Consensus 216 ~~ 217 (245)
T PRK12367 216 II 217 (245)
T ss_pred EE
Confidence 33
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.7e-12 Score=124.53 Aligned_cols=182 Identities=12% Similarity=0.124 Sum_probs=125.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
|+++||||+|+||.+++++|+++|++| .++.+|++|++++.++++.+ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 379999999999999999999999765 12468999988888776653 479
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH------cCCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE------NGLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~------~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||.... +..+...++....+++|+.++.++++++.. .+.+++++||...+.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------------- 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV----------------- 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------------
Confidence 99999996421 111223344567799999999999998742 124778887764331
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHH-hc----Cc-----eeccCCCccchhh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKIS-RY----NK-----VVNIPNSMTILDE 574 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~-~~----~~-----~~~~~~~~~~v~D 574 (676)
+......|+.+|...+.+.+... ...++++..++|+.+..+. ..... .+ .+ ........+..+|
T Consensus 144 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (272)
T PRK07832 144 -ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL--VNTVEIAGVDREDPRVQKWVDRFRGHAVTPEK 220 (272)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc--hhcccccccCcchhhHHHHHHhcccCCCCHHH
Confidence 11223569999998887776642 3468999999999998763 11110 00 00 0001124568899
Q ss_pred HHHHHHHHHhcC
Q 005818 575 LLPISVEMAKRN 586 (676)
Q Consensus 575 ~a~~~~~~~~~~ 586 (676)
+|++++.++.++
T Consensus 221 vA~~~~~~~~~~ 232 (272)
T PRK07832 221 AAEKILAGVEKN 232 (272)
T ss_pred HHHHHHHHHhcC
Confidence 999999998653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-10 Score=116.73 Aligned_cols=225 Identities=15% Similarity=0.071 Sum_probs=140.2
Q ss_pred CCCCeEEEEcC--CchhHHHHHHHHHHcCCCcEEEEEcCCCc-c---------ccccCCCCCC---CCCCeEEEEecC--
Q 005818 5 YTPKNILITGA--AGFIASHVCNRLIGNYPEYKIVVLDKLDY-C---------SNLKNLNPSR---LSPNFKFIKGDV-- 67 (676)
Q Consensus 5 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~-~---------~~~~~~~~~~---~~~~v~~v~~Dl-- 67 (676)
+++|++||||| +..||.++++.|.+. |.+|++ .|... . ...+...... .......+.+|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 66899999999 899999999999999 677777 33210 0 0000000000 011246788888
Q ss_pred CCHH------------------HHHHHHcc-----CCCCEEEEccccCC------cCCcCCChHHHHHHHHHHHHHHHHH
Q 005818 68 ASAD------------------LVHFILLT-----EKIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEA 118 (676)
Q Consensus 68 ~d~~------------------~~~~~~~~-----~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a 118 (676)
.+++ ++.+++.. .++|++||+||... .+.+.+++...+++|+.++..+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3322 55555422 36999999996432 1345567788999999999999887
Q ss_pred HHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCC
Q 005818 119 CKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 193 (676)
Q Consensus 119 ~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~ 193 (676)
+... ..-.++|++||....-..... ...|+.+|...+.+.+.++.+ +|+++..+-||.+-.+
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~~p~~-------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~ 230 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSR 230 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCCCCCC-------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCc
Confidence 6542 111589999996543221100 125999999999999888775 3689999999998766
Q ss_pred CCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 194 NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
.................. .++ . .+...+|++.++++++.... .++.+.+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~pl-----~--r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 231 AAKAIGFIDDMIEYSYAN--APL-----Q--KELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred hhhcccccHHHHHHHHhc--CCC-----C--CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 431100111111111111 111 1 24577999999999986422 4566666554
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.7e-11 Score=122.87 Aligned_cols=202 Identities=16% Similarity=0.179 Sum_probs=143.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
|+|+|||||||+|++++++|+++|++| .+..+|+.++..+...+++. |.++++.+...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~--~~~~~i~~~~~--- 75 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGV--DGVLLISGLLD--- 75 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccc--cEEEEEecccc---
Confidence 479999999999999999999999865 57778999999999999998 99999988541
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
... ...........+..+.+. .+++ ++++|. ++.. . .....|..+|..+|+.
T Consensus 76 -----~~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~---~~~~----------------~-~~~~~~~~~~~~~e~~ 128 (275)
T COG0702 76 -----GSD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSV---LGAD----------------A-ASPSALARAKAAVEAA 128 (275)
T ss_pred -----ccc-chhHHHHHHHHHHHHHhc-CCceEEEEecc---CCCC----------------C-CCccHHHHHHHHHHHH
Confidence 111 122333444444444444 2233 333332 2211 1 1226799999999999
Q ss_pred HHHccCeEEEEeeecccCCCC-ChHHH-H-HHHHhcCceeccCC---CccchhhHHHHHHHHHhcC--CCceeEccCCCc
Q 005818 527 LKEYDNVCTLRVRMPISSDLN-NPRNF-I-TKISRYNKVVNIPN---SMTILDELLPISVEMAKRN--LSGIWNFTNPGV 598 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~-g~~~~-~-~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~ 598 (676)
+.+ .+++.+.+|+...| +.... + .....+.+....+. +++.++|++.++...+..+ ..++|.+++++.
T Consensus 129 l~~----sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~ 204 (275)
T COG0702 129 LRS----SGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEA 204 (275)
T ss_pred HHh----cCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCce
Confidence 965 46777777755554 43332 3 33333333333333 7899999999999998876 446999999999
Q ss_pred ccHHHHHHHHHhhcCCCCcccccc
Q 005818 599 VSHNEILEMYKAYIDPGFKWTNFT 622 (676)
Q Consensus 599 ~s~~e~~~~i~~~~g~~~~~~~~~ 622 (676)
.+..++++.+.+..|.+....+.+
T Consensus 205 ~~~~~~~~~l~~~~gr~~~~~~~~ 228 (275)
T COG0702 205 LTLAELASGLDYTIGRPVGLIPEA 228 (275)
T ss_pred ecHHHHHHHHHHHhCCcceeeCCc
Confidence 999999999999999887774444
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.2e-11 Score=118.75 Aligned_cols=196 Identities=12% Similarity=0.105 Sum_probs=133.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~----~~d 434 (676)
.++++||||+|.||.++++.|+++|++| ..+.+|++|+++++++++.. ++|
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD 87 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPD 87 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCc
Confidence 3579999999999999999999999754 35678999999988887753 579
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
++||+||..... ..+...++....+++|+.++..+.+++. +.+ .++|++||...+.
T Consensus 88 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~------------------ 149 (263)
T PRK08339 88 IFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE------------------ 149 (263)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC------------------
Confidence 999999964211 1122334556778999888877766553 333 5788888875431
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHh---------------c-CceeccCCCc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISR---------------Y-NKVVNIPNSM 569 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~---------------~-~~~~~~~~~~ 569 (676)
+......|+.+|...+.+.+.+. ...++|+..+.|+.+..+. ...... . ..... ...+
T Consensus 150 ~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~ 226 (263)
T PRK08339 150 PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR--VIQLAQDRAKREGKSVEEALQEYAKPIP-LGRL 226 (263)
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH--HHHHHHhhhhccCCCHHHHHHHHhccCC-cccC
Confidence 11223569999999999888863 3468999999999987663 111100 0 00011 1235
Q ss_pred cchhhHHHHHHHHHhcC---CCc-eeEccCCCccc
Q 005818 570 TILDELLPISVEMAKRN---LSG-IWNFTNPGVVS 600 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~~~s 600 (676)
...+|++.+++.++... .+| ++.+.++...|
T Consensus 227 ~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 227 GEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred cCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 56899999999888643 234 56665554443
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-11 Score=122.35 Aligned_cols=184 Identities=16% Similarity=0.124 Sum_probs=123.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 86 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTL 86 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999754 24678999999888877653 57
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHH----HHHcC--CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADV----CRENG--LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a----~~~~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|++||+||..... ......++.+..+++|+.++..++++ +.+.+ .++|++||...+
T Consensus 87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~----------------- 149 (261)
T PRK08936 87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ----------------- 149 (261)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------------
Confidence 9999999965211 11112244556789999888765554 44443 467787775322
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH---HH--HHHHhcCceeccCCCccchhhHHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN---FI--TKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~---~~--~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
.+..+...|+.+|...+.+.+.+. ...++++..++|+.+..+.. +. ........... ...+...+|+++.
T Consensus 150 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~ 227 (261)
T PRK08936 150 -IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP-MGYIGKPEEIAAV 227 (261)
T ss_pred -CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC-CCCCcCHHHHHHH
Confidence 123344679999988887777653 23589999999999876631 10 00000000111 1245668899999
Q ss_pred HHHHHhcC
Q 005818 579 SVEMAKRN 586 (676)
Q Consensus 579 ~~~~~~~~ 586 (676)
+..++...
T Consensus 228 ~~~l~s~~ 235 (261)
T PRK08936 228 AAWLASSE 235 (261)
T ss_pred HHHHcCcc
Confidence 99988653
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=119.12 Aligned_cols=169 Identities=8% Similarity=0.035 Sum_probs=118.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++++||||++.||.++++.|+++ +++|++.+|...... .+.+. .....+..+.+|+.|++++.++++.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCS--ALTDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHH--hcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888887542110 00111 1133577889999999998776632
Q ss_pred --C-CCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 --E-KIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~-~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
. ++|++||+||..... .+.++....++.|+.++..+.+.+. +.++-..+|++||...+.
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------- 149 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------- 149 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---------
Confidence 3 699999999753321 1223344566778887776655432 222135899999853221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 194 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~ 194 (676)
+...|+.+|...+.+.+.++.+ +++++..+.||.+-.+.
T Consensus 150 --------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 150 --------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 1345999999999999887764 48999999999987763
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.2e-12 Score=122.60 Aligned_cols=178 Identities=16% Similarity=0.066 Sum_probs=120.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCC--hHHHHHHhh----c--
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLEN--RSQLLADIQ----N-- 430 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d--~~~~~~~~~----~-- 430 (676)
+++|+||||+|+||.+++++|+++|++|. .+..|+.+ .+++.++++ .
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~ 85 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ 85 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence 36899999999999999999999998762 34467764 334444332 1
Q ss_pred cCCCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 431 VKPTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 431 ~~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
-++|+|||+||.... |..+...++....+++|+.|+.++++++.+. + .+++++||.....
T Consensus 86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~------------- 152 (239)
T PRK08703 86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET------------- 152 (239)
T ss_pred CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-------------
Confidence 157999999996421 1112223445567899999999998888552 2 4777777653220
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHccCe----EEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDNV----CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+......|+.||...|.+++.+... .++++..++|+.+++|... +...+. ....+...+|++..+
T Consensus 153 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~--~~~~~~----~~~~~~~~~~~~~~~ 221 (239)
T PRK08703 153 -----PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI--KSHPGE----AKSERKSYGDVLPAF 221 (239)
T ss_pred -----CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc--ccCCCC----CccccCCHHHHHHHH
Confidence 2223457999999999998876422 2699999999999987421 111111 112456788999999
Q ss_pred HHHHhc
Q 005818 580 VEMAKR 585 (676)
Q Consensus 580 ~~~~~~ 585 (676)
+.++..
T Consensus 222 ~~~~~~ 227 (239)
T PRK08703 222 VWWASA 227 (239)
T ss_pred HHHhCc
Confidence 888863
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-11 Score=138.10 Aligned_cols=184 Identities=15% Similarity=0.103 Sum_probs=128.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++|+
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 395 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI 395 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 589999999999999999999999765 45678999999998888764 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||...... .+...++....+++|+.|+.++++++.. . +.++|++||...+..
T Consensus 396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------- 458 (582)
T PRK05855 396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP----------------- 458 (582)
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----------------
Confidence 999999752111 1222345567789999999999887643 2 257899988876631
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHH-hcC----------ceec-cCCCccchh
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKIS-RYN----------KVVN-IPNSMTILD 573 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~-~~~----------~~~~-~~~~~~~v~ 573 (676)
..+...|+.||...+.+++.+. ...++++..+.|+.+..+. ..... .+. .... ........+
T Consensus 459 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 535 (582)
T PRK05855 459 -SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI--VATTRFAGADAEDEARRRGRADKLYQRRGYGPE 535 (582)
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc--hhccccCCcccchhhhHHhhhhhhccccCCCHH
Confidence 1234679999999998887753 3468999999999886541 11100 000 0000 001123468
Q ss_pred hHHHHHHHHHhcCCC
Q 005818 574 ELLPISVEMAKRNLS 588 (676)
Q Consensus 574 D~a~~~~~~~~~~~~ 588 (676)
|+|++++.++.++..
T Consensus 536 ~va~~~~~~~~~~~~ 550 (582)
T PRK05855 536 KVAKAIVDAVKRNKA 550 (582)
T ss_pred HHHHHHHHHHHcCCC
Confidence 888888888876544
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=125.54 Aligned_cols=179 Identities=16% Similarity=0.097 Sum_probs=118.8
Q ss_pred EEEcCCchhHHHHHHHHHHcCCC-cEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CCC
Q 005818 11 LITGAAGFIASHVCNRLIGNYPE-YKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EKI 82 (676)
Q Consensus 11 lVtGatG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~~ 82 (676)
|||||++.||.++++.|+++ + ++|++.+|...... ...+ .....++.++++|+.|.+++.+++.. .++
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHh--cCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 69999999999999999999 5 78888887542111 0011 11134678899999999998777632 368
Q ss_pred CEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCC-CceEEEEecccccCCCC-C--Cc--CC-
Q 005818 83 DTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQ-IKRFIHVSTDEVYGETD-E--DA--VV- 146 (676)
Q Consensus 83 d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~-~~~~v~~SS~~vyg~~~-~--~~--~~- 146 (676)
|++||+||.... ..+.+++...+++|+.|+..+.+++.. .+. ..++|++||...+-... + .+ ..
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG 156 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence 999999997532 123445668899999998888665432 210 25899999975542110 0 00 00
Q ss_pred -------CC-CC-------CCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCC
Q 005818 147 -------GN-HE-------ASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 193 (676)
Q Consensus 147 -------~~-~e-------~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~ 193 (676)
.. ++ .....+...|+.||+..+.+++.++++ .|+.++.+.||+|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT 222 (308)
T ss_pred hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence 00 00 011234457999999977776766654 3799999999999643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-11 Score=123.04 Aligned_cols=148 Identities=18% Similarity=0.141 Sum_probs=108.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++++||||+|+||++++++|+++|++| ..+.+|+.|.+++.++++.+ ++|++|
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 84 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLI 84 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 3689999999999999999999999765 34668999988888777653 679999
Q ss_pred ECccccC--CCCcchhc----cchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 438 NAAGVTG--RPNVDWCE----THKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 438 h~a~~~~--~~~~~~~~----~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+||... .+...... ++.+..+++|+.++..+++++.+. +.++|++||+..+.
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~----------------- 147 (262)
T TIGR03325 85 PNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY----------------- 147 (262)
T ss_pred ECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-----------------
Confidence 9998531 00001111 134567899999999999998653 34678887765441
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCCCh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNP 549 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~ 549 (676)
+......|+.+|...+.+++.+...+ .+++..+.|+.+..+
T Consensus 148 -~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 148 -PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 11223569999999999998864322 289999999988754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 676 | ||||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 1e-68 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 2e-68 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-65 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 2e-65 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 1e-63 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 1e-62 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 3e-52 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 2e-26 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 2e-25 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 2e-25 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 2e-24 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 2e-24 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 3e-24 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-23 | ||
| 2pk3_A | 321 | Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose | 3e-23 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 4e-23 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 5e-23 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 6e-23 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-23 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 9e-23 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 9e-23 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-22 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-22 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-22 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 6e-22 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 6e-22 | ||
| 1orr_A | 347 | Crystal Structure Of Cdp-tyvelose 2-epimerase Compl | 9e-22 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 6e-21 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 2e-19 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-19 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-19 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 4e-19 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 3e-17 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 5e-17 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 1e-14 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 2e-14 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 2e-14 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 6e-14 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 6e-14 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 9e-14 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 5e-13 | ||
| 1wvg_A | 359 | Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal | 2e-12 | ||
| 3m2p_A | 311 | The Crystal Structure Of Udp-N-Acetylglucosamine 4- | 5e-11 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 4e-10 | ||
| 1rkx_A | 357 | Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose | 5e-10 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 4e-09 | ||
| 1z75_A | 358 | Crystal Structure Of Arna Dehydrogenase (decarboxyl | 7e-09 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 1e-08 | ||
| 1z74_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 2e-08 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-08 | ||
| 1u9j_A | 358 | Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl | 2e-08 | ||
| 2bll_A | 345 | Apo-Structure Of The C-Terminal Decarboxylase Domai | 3e-08 | ||
| 1db3_A | 372 | E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | 3e-08 | ||
| 1z7b_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 3e-08 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 4e-08 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 4e-08 | ||
| 1z7e_A | 660 | Crystal Structure Of Full Length Arna Length = 660 | 4e-08 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 5e-08 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 6e-08 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 6e-08 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 1e-07 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 5e-07 | ||
| 4f6l_B | 508 | Crystal Structure Of Aureusimine Biosynthetic Clust | 7e-07 | ||
| 1t2a_A | 375 | Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr | 1e-06 | ||
| 2gn4_A | 344 | Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd | 2e-06 | ||
| 1n7g_A | 381 | Crystal Structure Of The Gdp-mannose 4,6-dehydratas | 3e-06 | ||
| 4f6c_A | 427 | Crystal Structure Of Aureusimine Biosynthetic Clust | 1e-05 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 3e-05 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 9e-05 | ||
| 1rpn_A | 335 | Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase | 1e-04 | ||
| 3rft_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 5e-04 | ||
| 2z1m_A | 345 | Crystal Structure Of Gdp-D-Mannose Dehydratase From | 8e-04 |
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359 | Back alignment and structure |
|
| >pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|1RKX|A Chain A, Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose 4,6- Dehydratase From Yersinia Pseudotuberculosis Length = 357 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358 | Back alignment and structure |
|
| >pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345 | Back alignment and structure |
|
| >pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | Back alignment and structure |
|
| >pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508 | Back alignment and structure |
|
| >pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375 | Back alignment and structure |
|
| >pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344 | Back alignment and structure |
|
| >pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph And Gdp-rhamnose. Length = 381 | Back alignment and structure |
|
| >pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335 | Back alignment and structure |
|
| >pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267 | Back alignment and structure |
|
| >pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 676 | |||
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 1e-140 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 1e-139 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 1e-136 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 1e-134 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 1e-133 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 1e-130 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-111 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 1e-103 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 3e-90 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 2e-85 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 3e-05 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 6e-82 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 1e-76 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 2e-76 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 3e-71 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 4e-06 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 3e-69 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 5e-04 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 3e-69 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 3e-66 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-06 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 3e-65 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 2e-62 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 7e-62 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 1e-58 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 4e-58 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-56 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-04 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 2e-56 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 2e-56 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 1e-54 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 1e-51 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 2e-51 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 2e-06 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 6e-43 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 2e-41 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 8e-41 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 3e-04 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 1e-40 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 7e-34 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 4e-30 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 2e-29 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 1e-28 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 2e-28 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 9e-28 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 3e-26 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 3e-25 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 2e-22 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 5e-20 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 6e-20 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 7e-20 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 3e-19 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 6e-19 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 7e-19 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 4e-16 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 1e-14 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 4e-14 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 1e-10 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 1e-13 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 3e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-12 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 9e-12 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 2e-11 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 9e-10 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 3e-11 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 5e-10 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 3e-11 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 6e-11 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 1e-09 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 2e-09 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 7e-09 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 1e-08 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 1e-08 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 6e-07 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 1e-08 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 2e-08 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 2e-08 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 2e-08 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 9e-08 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 1e-07 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 2e-07 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 2e-07 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 3e-07 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 9e-07 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 2e-06 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 2e-06 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 3e-06 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 4e-06 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 8e-05 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 6e-04 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 1e-04 |
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 411 bits (1060), Expect = e-140
Identities = 132/330 (40%), Positives = 198/330 (60%), Gaps = 8/330 (2%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
+L+TG GFI S+ ++ +P+++++ +DKL Y SN NL P + F+KG
Sbjct: 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG 61
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
DVA +LV ++ K+D ++H AA++HVD S + F +N+ GT+ LLE+ +
Sbjct: 62 DVADYELVKELV--RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPE 119
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
RF+HVSTDEVYG+ + + E +L+P++PYSATKA ++MLV+ + R+Y L T
Sbjct: 120 VRFVHVSTDEVYGDILKGSF---TENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASIT 176
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245
R N YGP QFPEKLIPK I+ A G +PI+G G NVR +LY ED A + +L KGE
Sbjct: 177 RCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236
Query: 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWY 304
+YNI +E+ ++V I +L + I+ VE+RP +D RY LD K+ L W
Sbjct: 237 REIYNISAGEEKTNLEVVKIILRLMG-KGEELIELVEDRPGHDLRYSLDSWKITRDLKWR 295
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+ T++EG++KT+ WY+ N WW +
Sbjct: 296 PKYTFDEGIKKTIDWYLKNEWWWKPLVDER 325
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 410 bits (1057), Expect = e-139
Identities = 131/326 (40%), Positives = 198/326 (60%), Gaps = 5/326 (1%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
NIL+TG AGFI S+ + ++ +Y YKI+ D L Y NL N+ + PN+ F+KG
Sbjct: 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG 82
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
++ + +L+ ++ + I++FAA++HVD S N F N+ GT LLE K
Sbjct: 83 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-H 141
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ + VSTDEVYG + E + L P +PYS++KA A+M+ +AY ++Y LPVI T
Sbjct: 142 IKLVQVSTDEVYGSLGKTGRF--TEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVT 199
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245
R +N YGP Q+PEKLIP + A++GK LP++GDG NVR +L+ D A D +LHKG V
Sbjct: 200 RCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV 259
Query: 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWY 304
G VYNIG E+ ++V I L I++V +R +D+RY ++ +K+K + W
Sbjct: 260 GEVYNIGGNNEKTNVEVVEQIITLLG-KTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWE 318
Query: 305 ERVTWEEGLQKTMKWYISNPDWWGDV 330
+ T+E+GLQ+T++WY N +WW +
Sbjct: 319 PKYTFEQGLQETVQWYEKNEEWWKPL 344
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 403 bits (1037), Expect = e-136
Identities = 122/331 (36%), Positives = 188/331 (56%), Gaps = 13/331 (3%)
Query: 9 NILITGAAGFIASHVCNRLIGN----YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
+L+TG AGFI SH +L+ P +++VLD L Y N NL P P +F+
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ A L+ L +D I+HFAA++HVD S + FT+ N+ GT LL+ G
Sbjct: 62 GDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG- 118
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ R +HVST++VYG D + E+S L P +PY+A+KAG++++ AY R+YGL V
Sbjct: 119 VGRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TR N YGP Q PEKLIP F+ + G LP++GDG+NVR +++ +D +L G
Sbjct: 176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGW 303
G +Y+IG E ++ + + ++ V +R +D RY LD K++ +LG+
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDSLG-ADWSSVRKVADRKGHDLRYSLDGGKIERELGY 294
Query: 304 YERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
+V++ +GL +T++WY N WW + + A
Sbjct: 295 RPQVSFADGLARTVRWYRENRGWWEPLKATA 325
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 397 bits (1022), Expect = e-134
Identities = 120/340 (35%), Positives = 178/340 (52%), Gaps = 18/340 (5%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + + G
Sbjct: 3 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVG 61
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+A A+LV + K D I+H+AA++H DNS + F N GT+ LLEA +
Sbjct: 62 DIADAELVDKLA--AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-- 117
Query: 126 KRFIHVSTDEVYGETDEDAVVGNH---------EASQLLPTNPYSATKAGAEMLVMAYGR 176
RF HVSTDEVYG+ + H + P++PYS+TKA ++++V A+ R
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR 177
Query: 177 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
S+G+ + +N YGP Q EK IP+ I + G ++G+G NVR +++ D +
Sbjct: 178 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237
Query: 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQ 296
IL KG +G Y IG E+ +V I + P V +R +D RY +D
Sbjct: 238 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMG-QPKDAYDHVTDRAGHDLRYAIDAS 296
Query: 297 KLK-QLGWYERVTW-EEGLQKTMKWYISNPDWWGDV-SGA 333
KL+ +LGW + T EGL++T++WY N DWW
Sbjct: 297 KLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEKEAV 336
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-133
Identities = 139/348 (39%), Positives = 195/348 (56%), Gaps = 24/348 (6%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITG AGFI S V +I + +V +DKL Y NL++L+ S + F D+
Sbjct: 2 KILITGGAGFIGSAVVRHII-KNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ---- 124
+ + I + D +MH AA++HVD S F + NI GT+ LLE +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 125 ----IKRFIHVSTDEVYG---ETDEDAVVGNH----EASQLLPTNPYSATKAGAEMLVMA 173
RF H+STDEVYG DE E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 174 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
+ R+YGLP I T +N YGP FPEKLIP IL A++GKPLPI+G G +R +LY ED A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 234 EAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDT-----QIKFVENRPFN 287
A ++ +G+ G YNIG E++ +DV IC L + P QI +V +RP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 333
D+RY +D K+ + LGW T+E G++KT++WY++N W +V SGA
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGA 348
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 386 bits (993), Expect = e-130
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 30/346 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+LITG GF+ S++ + + ++V D L NL+ NF+F+ GD+
Sbjct: 2 AKLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + V ++ D+ H A Q + S N + N+ GT LLEA +
Sbjct: 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119
Query: 128 FIHVSTDEVYGETDEDAVVGNH-------------EASQLLPTNPYSATKAGAEMLVMAY 174
I+ ST++VYG+ ++ E++QL +PY +K A+ ++ Y
Sbjct: 120 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 179
Query: 175 GRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAM-----KGKPLPIHGDGSNVRSY 226
R +GL + R +++YG QF + + F A+ KP I G+G VR
Sbjct: 180 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 239
Query: 227 LYCEDVAEAFDTILHKGE--VGHVYNIG--TKKERRVIDVATDICKLFSLNPDTQIKFVE 282
L+ ED+ + T L G+ +NIG ++++ + N D + +
Sbjct: 240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDY--CNIDMRFTNLP 297
Query: 283 NRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWW 327
R + + + D++K+ + W +V+ ++G+QK W S +
Sbjct: 298 VRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILEHH 343
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 340 bits (874), Expect = e-111
Identities = 84/341 (24%), Positives = 150/341 (43%), Gaps = 27/341 (7%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
N+++ G AGF+ S++ RL+ ++ V+D L + N+ P +F +
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLS-AEKINVPDH---PAVRFSE 84
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
+ L+ + ++ D + H A +S + +NN T L E K +
Sbjct: 85 TSITDDALLASLQ--DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR 142
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLP 181
+K+ ++ + E D E + N YS +K E + Y + + LP
Sbjct: 143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLP 202
Query: 182 VITTRGNNVYGPNQFP-------------EKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228
+ R NVYGP + + P FI A+KG PLP+ G R +++
Sbjct: 203 TVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF 262
Query: 229 CEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND 288
EDVA G G VYNI + KE + D+AT I ++ +T++ + RP+++
Sbjct: 263 VEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEI--TGNNTELDRLPKRPWDN 320
Query: 289 -QRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWW 327
+ F +K ++ LG+ V+ ++GL+KT++W +N
Sbjct: 321 SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLAVI 361
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = e-103
Identities = 66/324 (20%), Positives = 121/324 (37%), Gaps = 27/324 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
I +TG GF+ +V + + ++L ++ ++++ D
Sbjct: 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILT---------RSIGNKAINDYEYRVSDY 51
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
DL++ +D ++H AA +N T L +AC I
Sbjct: 52 TLEDLIN---QLNDVDAVVHLAATRGSQGKI----SEFHDNEILTQNLYDACYENN-ISN 103
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
++ ST Y + + +E LP Y +K E + Y R GL + R
Sbjct: 104 IVYASTISAYSDETS---LPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRF 160
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
++YG N+ +I +F A G+ L +H + R +LY +D A++ L + +V
Sbjct: 161 AHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG 220
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYER 306
+NIG+ +VA I F N D + N ++D K K+ L +
Sbjct: 221 TFNIGSGDALTNYEVANTINNAFG-NKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTD 279
Query: 307 VTWEEGLQKTMKWYIS---NPDWW 327
+ +++ P W+
Sbjct: 280 YNFATAVEEIHLLMRGLDDVPLWY 303
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 282 bits (725), Expect = 3e-90
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 38/334 (11%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL--SP 58
M ILITG AGFI H+ L+ + ++ VLD L + + P
Sbjct: 1 MQRNTLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKP 58
Query: 59 NFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 118
+ + D++ + + H A+ V SF ++ N + LL
Sbjct: 59 VLELEERDLS------------DVRLVYHLASHKSVPRSFKQPLDYLDN-VDSGRHLLAL 105
Query: 119 CKITGQIKRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 173
C G + + + ST EVYG+ T ED+ + P +PY+A+K G EM+ A
Sbjct: 106 CTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLS--------PRSPYAASKVGLEMVAGA 156
Query: 174 YGRSYGLPVIT-TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232
+ R+ P + R NVYGP + P+ L+P+ + LP+ GDG R + Y DV
Sbjct: 157 HQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDV 216
Query: 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYF 292
+ + ++ + V N G+ + V DV + +P ++ + RP +
Sbjct: 217 VDKLVALANRP-LPSVVNFGSGQSLSVNDVIRILQA---TSPAAEVARKQPRPNEITEFR 272
Query: 293 LDVQKLKQ-LGWYE-RVTWEEGLQKTMKWYISNP 324
D + +G + EEG++ T++W+ S
Sbjct: 273 ADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRD 306
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 2e-85
Identities = 66/370 (17%), Positives = 130/370 (35%), Gaps = 56/370 (15%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-----DYCSNLKNLNP----------- 53
+++ G G+ L Y++ ++D L D+ L++L P
Sbjct: 14 VMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 54 -SRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTK---NNI 109
+ + + GD+ + + + + D+++HF Q S + NN+
Sbjct: 72 KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 110 YGTHVLLEACKITGQIKRFIHVSTDEVYGE----TDEDAVVGNHEASQ------LLPTNP 159
GT +L A K G+ + + T YG +E + H ++
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 191
Query: 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL-----------------IP 202
Y +K + +++G+ VYG ++ +
Sbjct: 192 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALN 251
Query: 203 KFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL-HKGEVG--HVYNIGTKKERRV 259
+F + A G PL ++G G R YL D + + + + + G V+N T++ V
Sbjct: 252 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQ-FSV 310
Query: 260 IDVATDICKLFS-LNPDTQIKFVEN--RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKT 316
++A+ + K S L D + V N + Y KL +LG + L
Sbjct: 311 NELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSL 370
Query: 317 MKWYISNPDW 326
+ + + D
Sbjct: 371 LNFAVQFKDR 380
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 8/93 (8%)
Query: 454 HKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKH---PEGTGI-----GFKE 505
T NV+GTL + +E G G + EY + EG
Sbjct: 122 RAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDT 181
Query: 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 538
P SFY +K + +R
Sbjct: 182 LPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRA 214
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 260 bits (668), Expect = 6e-82
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 17/322 (5%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
I++TG AGFI SHV ++L + +IVV+D NL + N ++ + +K D+
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSESN---EIVVID------NLSSGNEEFVNEAARLVKADL 52
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A+ D+ ++ + + + H AA V N E +NN+ T+ LLEA + G + R
Sbjct: 53 AADDIKDYL---KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSR 108
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ ST VYGE E P + Y A+K E L+ +Y ++ + R
Sbjct: 109 IVFTSTSTVYGEAKVIPT---PEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRF 165
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
NV G + + L + L I G+G +SY+Y D +A L E +
Sbjct: 166 ANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVN 225
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLDVQKLKQLGWYER 306
++NIG++ + +V +A +C+ L+P + + D L ++KLK+LGW R
Sbjct: 226 IFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPR 285
Query: 307 VTWEEGLQKTMKWYISNPDWWG 328
EE ++ ++ + + D G
Sbjct: 286 YNSEEAVRMAVRDLVEDLDEEG 307
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 247 bits (632), Expect = 1e-76
Identities = 90/332 (27%), Positives = 141/332 (42%), Gaps = 33/332 (9%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
I++TG AGFI SH+ ++L+ Y++VV+D NL + ++P+ + D+
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVEL--GYEVVVVD------NLSSGRREFVNPSAELHVRDLK 53
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
I K D + HFAA V S N+ T +LE + TG ++
Sbjct: 54 DYSWGAGI----KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTV 108
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
+ S+ VYG+ D V+ E P + Y A KA E++ Y R +G+ + R
Sbjct: 109 VFASSSTVYGDAD---VIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYA 165
Query: 189 NVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAF----DTILHKG 243
NV GP +I FI+ + L + GDG+ +SYLY D EA
Sbjct: 166 NVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 224
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY------FLDVQK 297
N+G RV+D+A + ++ L +I+ V + P L V K
Sbjct: 225 APFLALNVGNVDAVRVLDIAQIVAEV--LGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTK 282
Query: 298 LKQ-LGWYERVTWEEGLQKTMKWYISNPDWWG 328
L + GW +T E ++KT + WG
Sbjct: 283 LMKLTGWRPTMTSAEAVKKTAEDLAKEL--WG 312
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 247 bits (634), Expect = 2e-76
Identities = 87/334 (26%), Positives = 141/334 (42%), Gaps = 25/334 (7%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLK---NLNPSRLSPNF 60
PK LITG AGFI S++ L+ + K+V LD + NL +L + NF
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
KFI+GD+ + D + +D ++H AA V S + NI G +L A +
Sbjct: 84 KFIQGDIRNLDDCNNAC--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 141
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
++ F + ++ YG+ + E + P +PY+ TK E+ + R YG
Sbjct: 142 DAK-VQSFTYAASSSTYGDHPG---LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGF 197
Query: 181 PVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
I R NV+G Q P +IPK+ ++G + I+GDG R + Y E+ +A
Sbjct: 198 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 257
Query: 237 DTILHKGE--VGHVYNIGTKKERRVIDVATDICKLF---SLNPDTQIKFVENRPFNDQRY 291
G VYNI + + + ++ + + + R D R+
Sbjct: 258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFRE-GDVRH 316
Query: 292 -FLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
D+ K + LG+ + G+ M WYI
Sbjct: 317 SLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 232 bits (595), Expect = 3e-71
Identities = 61/326 (18%), Positives = 115/326 (35%), Gaps = 31/326 (9%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
IL+TG++G I + + L Y + ++ D R + KFI DV++
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASD-----------IVQRDTGGIKFITLDVSN 50
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
D + + ID I H A + K N+ GT+ +LEA K +++ +
Sbjct: 51 RDEIDRAVEKYSIDAIFHLAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHR-VEKVV 108
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
ST V+G V + P + TK AE+L Y +GL V + R
Sbjct: 109 IPSTIGVFGPETPKNKV--PSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166
Query: 190 VYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH---- 241
+ P + A+K + + + +Y D +A +
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226
Query: 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP---FNDQRYFLDVQK- 297
K + + YN+ ++ + I + P+ +I++ E+ LD +
Sbjct: 227 KLVLRNGYNVTA-YTFTPSELYSKIKERI---PEFEIEYKEDFRDKIAATWPESLDSSEA 282
Query: 298 LKQLGWYERVTWEEGLQKTMKWYISN 323
+ G+ + + +
Sbjct: 283 SNEWGFSIEYDLDRTIDDMIDHISEK 308
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 15/128 (11%)
Query: 405 EKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFN-AAGVTGRPNVDWCETHKPETIRTNV 463
+ GI F + NR ++ ++ +F+ A ++ + E + N+
Sbjct: 37 DTGGIKFI--TLDVSNRDEIDRAVEKYSIDAIFHLAGILSAK-----GEKDPALAYKVNM 89
Query: 464 VGTLTLADVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522
GT + + +++ + + T +F + + + TK
Sbjct: 90 NGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKN------KVPSITITRPRTMFGVTKIA 143
Query: 523 VEELLKEY 530
E L + Y
Sbjct: 144 AELLGQYY 151
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 227 bits (582), Expect = 3e-69
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 24/321 (7%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+L+TG AGFI SH+ L+ ++ VLD NL + F + D+
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLAR--GLEVAVLD------NLATGKRENVPKGVPFFRVDLR 53
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V + + H AAQ V S + + N+ G LLEAC+ G +++
Sbjct: 54 DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKL 112
Query: 129 IHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ ST +YGE E E P +PY+A+KA E + YG+SYGL ++ R
Sbjct: 113 VFASTGGAIYGEVPEGERA--EETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRY 170
Query: 188 NNVYGPNQFPEK---LIPKFILLAMKGKPLPIHG-----DGSNVRSYLYCEDVAEAFDTI 239
NVYGP Q P ++ F +KG P+ ++ D VR Y+Y DVAEA
Sbjct: 171 GNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAH--A 228
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
L + +YN+GT + +V + + +++ RP + +R L KL
Sbjct: 229 LALFSLEGIYNVGTGEGHTTREVLMAVAEA--AGKAPEVQPAPPRPGDLERSVLSPLKLM 286
Query: 300 QLGWYERVTWEEGLQKTMKWY 320
GW +V ++EG++ T+ +
Sbjct: 287 AHGWRPKVGFQEGIRLTVDHF 307
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 29/135 (21%)
Query: 407 KGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG------RPNVDWCETHKPETIR 460
KG+PF + L ++ + + +PTHV + A P +D+
Sbjct: 43 KGVPFF--RVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDF---------E 91
Query: 461 TNVVGTLTLADVCRENGLLMMNYA-TGCIFEYDA---KHPEGTGIGFKEEDKPNFTGSFY 516
N++G L L + CR+ G+ + +A TG A + PEG EE P S Y
Sbjct: 92 VNLLGGLNLLEACRQYGVEKLVFASTGG-----AIYGEVPEGERA---EETWPPRPKSPY 143
Query: 517 SKTKAMVEELLKEYD 531
+ +KA E L Y
Sbjct: 144 AASKAAFEHYLSVYG 158
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 229 bits (585), Expect = 3e-69
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 25/334 (7%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD--YCSNLK---NLNPSRLSPNF 60
+PK LITG AGFI S++ +L+ ++ LD + NL L + F
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
FI+GD+ ++ + +D ++H AA V S + NI G +L A K
Sbjct: 82 CFIEGDIRDLTTCEQVM--KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK 139
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
++ F + ++ YG+ + E + P +PY+ TK E+ Y R+YG
Sbjct: 140 NAQ-VQSFTYAASSSTYGDHPA---LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGF 195
Query: 181 PVITTRGNNVYGPNQFPEK----LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
I R NV+G Q P +IPK+ +KG + I+GDG R + Y ++V +
Sbjct: 196 KTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 255
Query: 237 DTILHKGE--VGHVYNIGTKKERRVIDVATDICKLFSLNP---DTQIKFVENRPFNDQRY 291
+ ++YN+ + +++ I +L IK+ E R D R+
Sbjct: 256 ILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRS-GDVRH 314
Query: 292 -FLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
DV K L + + EGL+ +M WY+
Sbjct: 315 SQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 220 bits (562), Expect = 3e-66
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 39/324 (12%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS--PNFKFIK 64
K + ITG G I SH+ L+ K+V +D N L PN F++
Sbjct: 21 MKKVFITGICGQIGSHIAELLLER--GDKVVGID------NFATGRREHLKDHPNLTFVE 72
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
G +A LV+ ++ + D ++H AA + + + T N G +++A K
Sbjct: 73 GSIADHALVNQLIGDLQPDAVVHTAASYKDPDDW---YNDTLTNCVGGSNVVQAAKKNN- 128
Query: 125 IKRFIHVSTDEVYGET------DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
+ RF++ T YG D N S Y+ +K+ E Y
Sbjct: 129 VGRFVYFQTALCYGVKPIQQPVRLDHPR-NPANS------SYAISKSANE----DYLEYS 177
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
GL +T R NV GP +P F +GK + R +++ +D+A A
Sbjct: 178 GLDFVTFRLANVVGPRNVSG-PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVR 233
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLDVQK 297
+ Y+ + + + ++ + + +L + + E P +D LD +
Sbjct: 234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGP-DDAPSILLDPSR 291
Query: 298 LKQ-LGWYERVTWEEGLQKTMKWY 320
Q G E +E + + ++
Sbjct: 292 TIQDFGKIEFTPLKETVAAAVAYF 315
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 15/130 (11%)
Query: 411 FEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKP-ETIRTNVVGTLTL 469
+ +G + + + + I +++P V + A P TN VG +
Sbjct: 68 LTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDP-------DDWYNDTLTNCVGGSNV 120
Query: 470 ADVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLK 528
++N + Y T + + + + N S Y+ +K+ E+ L+
Sbjct: 121 VQAAKKNNVGRFVYFQTALCY-GV----KPIQQPVRLDHPRNPANSSYAISKSANEDYLE 175
Query: 529 EYD-NVCTLR 537
+ T R
Sbjct: 176 YSGLDFVTFR 185
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 3e-65
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 28/330 (8%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-------PN 59
+ ILITG AGF+ S++ N+P+ K+VVLDK + N PS L
Sbjct: 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK 69
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
+ I D+ + + L D + H AA + + N K N LLE
Sbjct: 70 GEVIAADINNPLDLR-RLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIA 126
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
+ + I+ S+ VYG T N P N Y +K + V+++ S
Sbjct: 127 RSKK--AKVIYASSAGVYGNTK----APNVVGKNESPENVYGFSKLCMDEFVLSH--SND 178
Query: 180 LPVITTRGNNVYGPNQFPEK----LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
+ R NVYGP +F ++ ++ + L AM K + + G +R ++Y EDV +A
Sbjct: 179 NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQA 238
Query: 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLD 294
+ + G VYN+G + R ++ + + + D ++ +++N Q++
Sbjct: 239 NVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG---DFKVTYIKNPYAFFQKHTQAH 294
Query: 295 VQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
++ L + E G++ + +
Sbjct: 295 IEPTILDLDYTPLYDLESGIKDYLPHIHAI 324
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 2e-62
Identities = 70/321 (21%), Positives = 113/321 (35%), Gaps = 20/321 (6%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I++TG AGFI S++ L + I+V+D L K +N L+ K D
Sbjct: 2 IIVTGGAGFIGSNIVKALN-DKGITDILVVDNLK--DGTKFVNLVDLNIADYMDKEDFLI 58
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ ++ I H A + G NN + LL C F+
Sbjct: 59 QIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IPFL 112
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+ S+ YG D + P N Y +K + V ++ R N
Sbjct: 113 YASSAATYGGRTSDFIE---SREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFN 169
Query: 190 VYGPNQFPEK----LIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
VYGP + + + G+ P G + R ++Y DVA+ L G
Sbjct: 170 VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG- 228
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLDVQKLKQLGW 303
V ++N+GT + VA I F + Q + D+ L+ G+
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 304 YE-RVTWEEGLQKTMKWYISN 323
+ T EG+ + M W +
Sbjct: 289 DKPFKTVAEGVTEYMAWLNRD 309
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 7e-62
Identities = 69/323 (21%), Positives = 114/323 (35%), Gaps = 20/323 (6%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ I++TG AGFI S++ L + I+V+D L + NL L+ K D
Sbjct: 47 RMIIVTGGAGFIGSNIVKALN-DKGITDILVVDNLKDGTKFVNLVD--LNIADYMDKEDF 103
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ ++ I H A + G NN + LL C
Sbjct: 104 LIQIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IP 157
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F++ S+ YG D + P N + +K + V ++ R
Sbjct: 158 FLYASSAATYGGRTSDFIE---SREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRY 214
Query: 188 NNVYGPNQFPEK----LIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
NVYGP + + + G+ P G + R ++Y DVA+ L
Sbjct: 215 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274
Query: 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLDVQKLKQL 301
G V ++N+GT + VA I F + Q + D+ L+
Sbjct: 275 G-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAA 333
Query: 302 GWYE-RVTWEEGLQKTMKWYISN 323
G+ + T EG+ + M W +
Sbjct: 334 GYDKPFKTVAEGVTEYMAWLNRD 356
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 201 bits (512), Expect = 1e-58
Identities = 70/344 (20%), Positives = 127/344 (36%), Gaps = 40/344 (11%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
K +LI G GFI H+ R++ V + L +L F +GD
Sbjct: 24 AKKVLILGVNGFIGHHLSKRILET--TDWEVFGMDM-QTDRLGDLVKH---ERMHFFEGD 77
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + +K D I+ A + + ++ + G K
Sbjct: 78 I-TINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--K 134
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP----YSATKAGAEMLVMAYGRSYGLPV 182
+ ST EVYG ++ + A P N Y+ +K + ++ YG GL
Sbjct: 135 HLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM-EGLNF 193
Query: 183 ITTRGNNVYGPNQFPEKL--------IPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
R N GP + +F+ ++G+ + + GS R++ Y +D
Sbjct: 194 TLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS 253
Query: 235 AFDTILHKGE---VGHVYNIGT-KKERRVIDVATDICKLFSLNPDT-----QIKFVEN-- 283
A I+ G +YNIG V ++A + +L + P+ ++K VE
Sbjct: 254 ALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTS 313
Query: 284 -----RPFND-QRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
+ D Q ++ Q LGW + T+++ L++ + Y
Sbjct: 314 GAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAY 357
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 4e-58
Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 33/234 (14%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
K +L+TGAAG + + RL ++ L LD PN + ++
Sbjct: 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQC 50
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+A A+ V+ + D I+H V+ F + NI G + L EA + G
Sbjct: 51 DLADANAVN--AMVAGCDGIVHLGGI-SVEKPFEQILQ---GNIIGLYNLYEAARAHG-Q 103
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
R + S++ G + + P Y +K E L Y +G
Sbjct: 104 PRIVFASSNHTIGYYPQTERL--GPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALV 161
Query: 186 RGNNVYGP------------NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227
R + + LI + G P+ + G +N +
Sbjct: 162 RIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPV-VWGASANDAGWW 214
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 2e-56
Identities = 71/317 (22%), Positives = 116/317 (36%), Gaps = 30/317 (9%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITG AG + S++ + ++I+V+D + L P I+G V
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFAT-GKREVLPPV---AGLSVIEGSVT 75
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
A L+ + K ++H AA + + N+ G+ + +A G +KR
Sbjct: 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAA---TNVQGSINVAKAASKAG-VKRL 131
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
++ T YG + S P Y +K E + +PV++ R
Sbjct: 132 LNFQTALCYGRPATVPIP---IDSPTAPFTSYGISKTAGEA----FLMMSDVPVVSLRLA 184
Query: 189 NVYGPNQFP-EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
NV GP IP F G+ VR +L D D L +G
Sbjct: 185 NVTGPRLAIGP--IPTFYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG 239
Query: 248 VYNIGTKKE---RRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
V+N+ T + + V DV D P + V + LD K + GW
Sbjct: 240 VFNVSTGEGHSIKEVFDVVLDYVGATLAEP---VPVVAPGADDVPSVVLDPSKTETEFGW 296
Query: 304 YERVTWEEGLQKTMKWY 320
+V +++ + + WY
Sbjct: 297 KAKVDFKDTITGQLAWY 313
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 23/140 (16%)
Query: 403 ICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVT---GRPNVDWCETHKPETI 459
+ G+ +G + + L + KPTHV ++A D
Sbjct: 61 LPPVAGLSVI--EGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDA--------- 109
Query: 460 RTNVVGTLTLADVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518
TNV G++ +A + G+ + T Y P I D P + Y
Sbjct: 110 ATNVQGSINVAKAASKAGVKRLLNFQTALC--YG--RPATVPI---PIDSPTAPFTSYGI 162
Query: 519 TKAMVEELLKEYD-NVCTLR 537
+K E L D V +LR
Sbjct: 163 SKTAGEAFLMMSDVPVVSLR 182
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 2e-56
Identities = 75/324 (23%), Positives = 125/324 (38%), Gaps = 26/324 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
I ITGA GFIASH+ RL + ++ D +++ F + V
Sbjct: 30 LKISITGAGGFIASHIARRLKHE--GHYVIASD----WKKNEHMTEDMFCDEFHLVDLRV 83
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ +TE +D + + AA + N NN + ++EA +I G IK
Sbjct: 84 MEN----CLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK 138
Query: 127 RFIHVSTDEVYGETDE-DAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPV 182
RF + S+ +Y E + + + + S P P + K E L Y + +G+
Sbjct: 139 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 198
Query: 183 ITTRGNNVYGPNQFP----EKLIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVAEAFD 237
R +N+YGP EK F A + GDG RS+ + ++ E
Sbjct: 199 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL 258
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297
+ V NIG+ + + ++A + I + P + D
Sbjct: 259 RLTKSDFREPV-NIGSDEMVSMNEMAEMVLSF--EEKKLPIHHIP-GPEGVRGRNSDNNL 314
Query: 298 LKQ-LGWYERVTWEEGLQKTMKWY 320
+K+ LGW + +EGL+ T W
Sbjct: 315 IKEKLGWAPNMRLKEGLRITYFWI 338
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 194 bits (494), Expect = 2e-56
Identities = 90/325 (27%), Positives = 150/325 (46%), Gaps = 34/325 (10%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 28 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 84
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
V + + ++D I H A+ N N + K N GT +L K G R
Sbjct: 85 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--AR 135
Query: 128 FIHVSTDEVYGE------TDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSY 178
+ ST EVYG+ +++ N P P Y K AE + AY +
Sbjct: 136 LLLASTSEVYGDPEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 188
Query: 179 GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236
G+ V R N +GP +++ FIL A++G+PL ++G GS R++ Y D+
Sbjct: 189 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248
Query: 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQ 296
+++ N+G +E +++ A I L ++I+F+ + Q+ D++
Sbjct: 249 VALMNSNVSS-PVNLGNPEEHTILEFAQLIKNLV--GSGSEIQFLSEAQDDPQKRKPDIK 305
Query: 297 KLKQ-LGWYERVTWEEGLQKTMKWY 320
K K LGW V EEGL K + ++
Sbjct: 306 KAKLMLGWEPVVPLEEGLNKAIHYF 330
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 1e-54
Identities = 73/354 (20%), Positives = 128/354 (36%), Gaps = 57/354 (16%)
Query: 9 NILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
+LI G GFI +H+ RL+ +Y ++ LD + P+F F++GD
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHY---EVYGLD--IGSDAISRFLNH---PHFHFVEGD 53
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ S +K D ++ A N + + ++ C K
Sbjct: 54 I-SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--K 110
Query: 127 RFIHVSTDEVYG--------ETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYG 175
R I ST EVYG E + +VG P YS +K + ++ AYG
Sbjct: 111 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGP-------VNKPRWIYSVSKQLLDRVIWAYG 163
Query: 176 RSYGLPVITTRGNNVYGPNQFPEKL--------IPKFILLAMKGKPLPIHGDGSNVRSYL 227
GL R N GP I + IL ++G P+ + G R +
Sbjct: 164 EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT 223
Query: 228 YCEDVAEAFDTILHKGE---VGHVYNIG-TKKERRVIDVATDICKLF-------SLNPDT 276
D EA I+ G + NIG + E + ++ + F P
Sbjct: 224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFA 283
Query: 277 QIKFVEN-----RPFND-QRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
+ VE+ + + D + ++ + L W ++ +E + +T+ +++
Sbjct: 284 GFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-51
Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 34/239 (14%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+L+TGAAG + S + L +++ + D ++ + + + D+
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLA--HEVRLSD---------IVDLGAAEAHEEIVACDL 51
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A A VH L + D I+H V+ + + + NI G + L EA + G R
Sbjct: 52 ADAQAVH--DLVKDCDGIIHLGGV-SVERPWNDILQ---ANIIGAYNLYEAARNLG-KPR 104
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ S++ G + P + Y +K E L Y + + + R
Sbjct: 105 IVFASSNHTIGYYPRTTRI--DTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRI 162
Query: 188 NNVYGPNQFPEKL-----IPKFILLAMKGKPLP------IHGDGSNVRSYLYCEDVAEA 235
+ + + + + F+ L + P ++G +N S+ D ++
Sbjct: 163 GSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWW---DNDKS 218
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 2e-51
Identities = 53/322 (16%), Positives = 102/322 (31%), Gaps = 22/322 (6%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
ILI GA G I + + +L K+ + + S+++ LN + + F +
Sbjct: 3 PKILIIGACGQIGTELTQKLR------KLYGTENV-IASDIRKLNTDVV-NSGPFEVVNA 54
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + ++ KI I AA N N+ +L K IK+
Sbjct: 55 LDFNQIEHLVEVHKITDIYLMAALLSATAE-KNPAFAWDLNMNSLFHVLNLAKAKK-IKK 112
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
S+ V+G T + + P+ Y +K E Y YG+ V + R
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIME--PSTVYGISKQAGERWCEYYHNIYGVDVRSIRY 170
Query: 188 NNVYGPNQFPEK----LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF----DTI 239
+ + P A+ K +Y +D +A
Sbjct: 171 PGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230
Query: 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299
+ K ++ YN+ ++A +I K T + + +D + +
Sbjct: 231 VEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAR 289
Query: 300 Q-LGWYERVTWEEGLQKTMKWY 320
+ W E + ++
Sbjct: 290 EDWDWKHTFDLESMTKDMIEHL 311
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 24/166 (14%), Positives = 49/166 (29%), Gaps = 33/166 (19%)
Query: 386 KFLIYGRTGWIG-GLLSKICEKKGI-------------------PFEYGKGRLENRSQLL 425
K LI G G IG L K+ + G PFE + +Q+
Sbjct: 4 KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVN--ALDFNQIE 61
Query: 426 ADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA- 484
++ K T ++ A + E + N+ + ++ + + + +
Sbjct: 62 HLVEVHKITDIYLMAALLSAT----AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117
Query: 485 TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY 530
+ +F + + Y +K E + Y
Sbjct: 118 SIAVFGPTTPKE------NTPQYTIMEPSTVYGISKQAGERWCEYY 157
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 6e-43
Identities = 55/341 (16%), Positives = 107/341 (31%), Gaps = 47/341 (13%)
Query: 9 NILITGAAGFIASHVCNRLI-----GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFI 63
+I I GAAG + + RL+ G P K ++D + P+ S
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID------VFQPEAPAGFSGAVDAR 69
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQ---THVDNSFGNSFEFT-KNNIYGTHVLLEAC 119
D+++ L+ + D I H AA + F+ + N+ GT L +A
Sbjct: 70 AADLSAPGEAE-KLVEARPDVIFHLAAIVSGEAELD-----FDKGYRINLDGTRYLFDAI 123
Query: 120 KITG----QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
+I R + S+ V+G + + P Y KA E+L+ Y
Sbjct: 124 RIANGKDGYKPRVVFTSSIAVFGAPLPYPIP---DEFHTTPLTSYGTQKAICELLLSDYS 180
Query: 176 RSYGLPVITTRGNNVYGPNQFPEK----LIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
R I R + P + + G+ + S +
Sbjct: 181 RRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240
Query: 232 VAEAF----DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP-F 286
+ K + V + + K+ + + + P
Sbjct: 241 AVGFLIHGAMIDVEKVGPRRNLS-MPGLSATVGEQIEALRKVA---GEKAVALIRREPNE 296
Query: 287 NDQRYF------LDVQKLKQLGWYERVTWEEGLQKTMKWYI 321
R + ++ ++LG+ ++EE +Q ++ +
Sbjct: 297 MIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL 337
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-41
Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 62/323 (19%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
NI+ITGA GF+ ++ L + ++ I + + L++
Sbjct: 2 NIVITGAKGFVGKNLKADLT-STTDHHIFEVHRQTKEEELESA----------------- 43
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
K D I+H A N + EF+ N+ +L+ K
Sbjct: 44 ----------LLKADFIVHLAGV----NRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPA 88
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
I +S+ NPY +K E L+ Y YG V R
Sbjct: 89 ILLSSSIQAT-----------------QDNPYGESKLQGEQLLREYAEEYGNTVYIYRWP 131
Query: 189 NVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV- 245
N++G P +I F + + + ++ D + + Y +D+ +
Sbjct: 132 NLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTI 190
Query: 246 -GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWY 304
V + + + ++ + K D + ++N F Y L +
Sbjct: 191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDN-LFEKDLYS------TYLSYL 243
Query: 305 ERVTWEEGLQKTMKWYISNPDWW 327
+ L + S ++
Sbjct: 244 PSTDFSYPLLMNVDDRGSFTEFI 266
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 8e-41
Identities = 50/344 (14%), Positives = 101/344 (29%), Gaps = 52/344 (15%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+ GA G + H + + +V++ L L P + ++
Sbjct: 16 YAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEP-------ECRVAEML 66
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ L +D ++ A E + + T+ AC + R
Sbjct: 67 DHAGLERAL--RGLDGVIFSAGYYPSRPR--RWQEEVASALGQTNPFYAACLQAR-VPRI 121
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPT----NPYSATKAGAEMLVMAYGRSYGLPVIT 184
++V + + HE + Y K + R+ GLPV+
Sbjct: 122 LYVGSAYAMPRHPQGLPG--HEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVI 178
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
V G + I G+ + + G R+ + + L +G
Sbjct: 179 GIPGMVLGEL-DIGPTTGRVITAIGNGE-MTHYVAGQ--RNVIDAAEAGRGLLMALERGR 234
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQI----------------KFVENRPFND 288
+G Y + + D+ I +L + + P D
Sbjct: 235 IGERYLLTG-HNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLD 293
Query: 289 --------QRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
FLD +K ++ LG++ ++ L + + W+ N
Sbjct: 294 ETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDN 337
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 19/150 (12%), Positives = 38/150 (25%), Gaps = 32/150 (21%)
Query: 407 KGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGT 466
+ E + + + L ++ + V +AG W E + + + T
Sbjct: 54 AYLEPECRVAEMLDHAGLERALRGL--DGVIFSAGYYPSRPRRW-----QEEVASALGQT 106
Query: 467 LTLADVCRENGLLMMNYATGCIFE-------YDAKHPEGTGIGFKEEDKPNFTGSF---Y 516
C + + A G+ E + S Y
Sbjct: 107 NPFYAACLQARV-----------PRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSY 155
Query: 517 SKTKAMVEELLKEYD----NVCTLRVRMPI 542
K ++E +E V M +
Sbjct: 156 VLCKWALDEQAREQARNGLPVVIGIPGMVL 185
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 1e-40
Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 43/271 (15%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
+ILI G AG+I SH +L+ G +VV+D NL+ + ++ KF G
Sbjct: 2 NSILICGGAGYIGSHAVKKLVDEG----LSVVVVD------NLQTGHEDAITEGAKFYNG 51
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
D+ + + E I+ +MHFAA + V S ++ NN+YG LLE +
Sbjct: 52 DLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-V 110
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+FI ST YGE D D + E + PTN Y TK E ++ Y ++ L
Sbjct: 111 DKFIFSSTAATYGEVDVDLIT---EETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIF 167
Query: 186 RGNNVYG----------PNQFPEK-LIPKFILLAMKGK--PLPIHG------DGSNVRSY 226
R NV G PE LIP +L G+ + + G DG+ +R Y
Sbjct: 168 RYFNVAGATPNGIIGEDHR--PETHLIP-LVLQVALGQREKIMMFGDDYNTPDGTCIRDY 224
Query: 227 LYCEDVAE----AFDTILHKGEVGHVYNIGT 253
++ ED+ + + GE YN+G
Sbjct: 225 IHVEDLVAAHFLGLKDLQNGGES-DFYNLGN 254
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 7e-34
Identities = 66/332 (19%), Positives = 131/332 (39%), Gaps = 27/332 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K + +TG GF + L + L + +R++ + GD+
Sbjct: 10 KRVFVTGHTGFKGGWLSLWL--QTMGATVKGYS-LTAPTVPSLFETARVADGMQSEIGDI 66
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + + + + + H AAQ V S+ E N+ GT LLEA + G +K
Sbjct: 67 RDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKA 126
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--------- 178
+++++D+ Y +++ + G E + +PYS +K AE++ +Y S+
Sbjct: 127 VVNITSDKCY--DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 184
Query: 179 GLPVITTRGNNVYGPNQF-PEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
G V T R NV G + ++++P + + +P+ I + +R + + + +
Sbjct: 185 GTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYL 243
Query: 238 TI-----LHKGEVGHVYNIGTKKE--RRVIDVATDICKLFSLNPDTQIKFVENRPFNDQR 290
+ E +N G V ++ + K + + N ++
Sbjct: 244 LLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYW--GEGASWQLDGNAHPHEAH 301
Query: 291 Y-FLDVQK-LKQLGWYERVTWEEGLQKTMKWY 320
Y LD K QLGW+ R L+ + W+
Sbjct: 302 YLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWH 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 4e-30
Identities = 66/309 (21%), Positives = 108/309 (34%), Gaps = 68/309 (22%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLD-----------------KLDYCSNLKNL 51
+L+ G AG+I SH L+ + + +V++D
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 52 NPSRLSPNFKFIKGDVASADLVHFILLTE-KIDTIMHFAAQTHVDNSFGNSFEFTKNNIY 110
P GDV + D ++ + ID ++H A V S + ++ NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 111 GTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNH----EASQLLPTNPYSATKAG 166
G LL+A + + I S+ ++G +V N ++ P +PY +K
Sbjct: 123 GILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLI 181
Query: 167 AEMLVMAYGRSYGLPVITTRGNNVYG----------PNQFPEK-LIP------------- 202
AE ++ +YG+ I R N G LIP
Sbjct: 182 AERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQ--GSTHLIPIILGRVMSDIAPD 239
Query: 203 ---KFILLAMKGKPLPIHG------DGSNVRSYLYCEDVAE----AFDTILHKGEVG--- 246
A K +PI G DG+ VR Y++ D+A A D + G
Sbjct: 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSK 299
Query: 247 --HVYNIGT 253
V+N+GT
Sbjct: 300 YFSVFNLGT 308
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-29
Identities = 75/353 (21%), Positives = 130/353 (36%), Gaps = 47/353 (13%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
+LI G GFI +H+ RL+ Y++ LD + P+F F++GD
Sbjct: 315 RTRVLILGVNGFIGNHLTERLL-REDHYEVYGLDI--GSDAISRF---LNHPHFHFVEGD 368
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
++ +K D ++ A N + + ++ C K
Sbjct: 369 ISIHS-EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--K 425
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-------YSATKAGAEMLVMAYGRSYG 179
R I ST EVYG + E L P YS +K + ++ AYG G
Sbjct: 426 RIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 482
Query: 180 LPVITTRGNNVYGPNQ----FPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
L R N GP + I + IL ++G P+ + G R + D
Sbjct: 483 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542
Query: 232 VAEA-FDTILHKGEV--GHVYNIGT-KKERRVIDVATDICKLFSLNP-------DTQIKF 280
EA + I + G G + NIG + E + ++ + F +P +
Sbjct: 543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRV 602
Query: 281 VENRPFNDQRYFLDVQK--------LKQLGWYERVTWEEGLQKTMKWYISNPD 325
VE+ + + Y DV+ + L W ++ +E + +T+ +++ D
Sbjct: 603 VESSSYYGKGY-QDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 86/353 (24%), Positives = 134/353 (37%), Gaps = 51/353 (14%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-------P 58
T IL+TG AG+I SH L+ + Y +V+ D NL N ++
Sbjct: 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIAD------NLVNSKREAIARIEKITGK 55
Query: 59 NFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 118
F + DV+ + I I +HFAA V S E+ +NN+ LL
Sbjct: 56 TPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRV 115
Query: 119 CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
+ +KR + S+ VYG + + E L TNPY TK AE ++ +
Sbjct: 116 MRERA-VKRIVFSSSATVYGVPERSPID---ETFPLSATNPYGQTKLMAEQILRDVEAAD 171
Query: 179 -GLPVITTRGNNVYG----------PNQFPEKLIPKFILLAMKGK--PLPIHG------D 219
V T R N G P P L+P ++ GK L + G D
Sbjct: 172 PSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP-YVAQVAVGKLEKLRVFGSDYPTPD 230
Query: 220 GSNVRSYLYCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPD 275
G+ VR Y++ D+A A D + + N+GT + V++V + F
Sbjct: 231 GTGVRDYIHVVDLARGHIAALDALERRDAS-LTVNLGTGRGYSVLEVV----RAFEKASG 285
Query: 276 TQI--KFVENRPFNDQRYFLDVQK-LKQLGWYERVTWEEGLQKTMKWYISNPD 325
+ + V RP + + + + +GW E +W +NP
Sbjct: 286 RAVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPR 338
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 96/355 (27%), Positives = 149/355 (41%), Gaps = 60/355 (16%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-------PNFK 61
+L+TG +G+I SH C +L+ N + +++LD NL N S L +
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILD------NLCNSKRSVLPVIERLGGKHPT 53
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
F++GD+ + L+ IL IDT++HFA V S E+ NN+ GT L+ A +
Sbjct: 54 FVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA 113
Query: 122 TGQIKRFIHVSTDEVYGETD-----EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
+K FI S+ VYG+ E G P +PY +K E ++ +
Sbjct: 114 AN-VKNFIFSSSATVYGDNPKIPYVESFPTGT-------PQSPYGKSKLMVEQILTDLQK 165
Query: 177 SY-GLPVITTRGNNVYG----------PNQFPEKLIPKFILLAMKGK--PLPIHG----- 218
+ + R N G P P L+P +I G+ L I G
Sbjct: 166 AQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPT 224
Query: 219 -DGSNVRSYLYCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN 273
DG+ VR Y++ D+A+ A + + +K V H+YN+G V+DV FS
Sbjct: 225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGV-HIYNLGAGVGNSVLDVV----NAFSKA 279
Query: 274 PDTQI--KFVENRPFNDQRYFLDVQK-LKQLGWYERVTWEEGLQKTMKWYISNPD 325
+ F R + Y+ D K ++L W T +E Q T W +P
Sbjct: 280 CGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 9e-28
Identities = 76/357 (21%), Positives = 130/357 (36%), Gaps = 54/357 (15%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-------PN 59
+ +L+TG AG+I SH L+ Y VV+D P L +
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS 59
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
+F + D+ + + ++HFA V S ++ + N+ GT LLE
Sbjct: 60 VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIM 119
Query: 120 KITGQIKRFIHVSTDEVYGETD-----EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 174
K G +K + S+ VYG E G TNPY +K E ++
Sbjct: 120 KAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGG-------CTNPYGKSKFFIEEMIRDL 171
Query: 175 GRSY-GLPVITTRGNNVYG----------PNQFPEKLIPKFILLAMKGK--PLPIHG--- 218
++ + R N G P P L+P ++ G+ L + G
Sbjct: 172 CQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP-YVSQVAIGRREALNVFGNDY 230
Query: 219 ---DGSNVRSYLYCEDVAE----AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271
DG+ VR Y++ D+A+ A + + +YN+GT V+ + +
Sbjct: 231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGC-RIYNLGTGTGYSVLQMV----QAME 285
Query: 272 LNPDTQI--KFVENRPFNDQRYFLDVQK-LKQLGWYERVTWEEGLQKTMKWYISNPD 325
+I K V R + + + ++LGW + + + +W NP
Sbjct: 286 KASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 76/323 (23%), Positives = 135/323 (41%), Gaps = 39/323 (12%)
Query: 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
+ LITG AGF+ ++ N L ++ + N PN + I
Sbjct: 10 HGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSR----------NNEAKLPNVEMIS 57
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D+ + V ++ K D I H AA++ V +S+ N N++GT +L+A + +
Sbjct: 58 LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL 117
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
R + + + E YG + + E +QL P +PY +KA ML Y ++YG+ +I
Sbjct: 118 DCRILTIGSSEEYGMILPEESPVS-EENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIH 176
Query: 185 TRGNNVYGPNQFPEKLIPKF------ILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
TR N GP Q + F I + + + + G+ VR + D+ +A+
Sbjct: 177 TRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV-GNLEAVRDFTDVRDIVQAYWL 235
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYF--LDVQ 296
+ G+ G VYN+ + R+ DV + + ++ DT++ + +V
Sbjct: 236 LSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTEL---------NPLQLRPSEVP 286
Query: 297 KL--------KQLGWYERVTWEE 311
L GW R+ E+
Sbjct: 287 TLIGSNKRLKDSTGWKPRIPLEK 309
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-25
Identities = 89/363 (24%), Positives = 138/363 (38%), Gaps = 52/363 (14%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS--- 57
+ + T K +L+TG AG+I SH LI N Y VV D NL N ++
Sbjct: 5 LQSESTSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVAD------NLSNSTYDSVARLE 56
Query: 58 ----PNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTH 113
+ F + D+ + + KID+++HFA V S + NNI GT
Sbjct: 57 VLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTV 116
Query: 114 VLLEACKITGQIKRFIHVSTDEVYGETDED-AVVGNHEASQLLPTNPYSATKAGAEMLVM 172
VLLE + + +F+ S+ VYG+ ++ E L PTNPY TK E ++
Sbjct: 117 VLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILN 175
Query: 173 AYGRSY--GLPVITTRGNNVYG----------PNQFPEKLIPKFILLAMKGK--PLPIHG 218
S R N G P P L+P ++ G+ L I G
Sbjct: 176 DLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAVGRREKLYIFG 234
Query: 219 ------DGSNVRSYLYCEDVAE----AFDTILHKGEVG---HVYNIGTKKERRVIDVATD 265
DG+ +R Y++ D+A+ A + E +N+G+ K V +V
Sbjct: 235 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVY-- 292
Query: 266 ICKLFSLNPDTQI--KFVENRPFNDQRYFLDVQK-LKQLGWYERVTWEEGLQKTMKWYIS 322
F + K R + + ++L W + E+ + KW
Sbjct: 293 --HAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 350
Query: 323 NPD 325
NP
Sbjct: 351 NPF 353
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 5e-20
Identities = 56/224 (25%), Positives = 85/224 (37%), Gaps = 37/224 (16%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD----KLDYCSNLKNLNPSRL 56
+ + ILITG G +++ KI+V K + N
Sbjct: 15 HQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN------ 68
Query: 57 SPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 116
P +F GDV + +++ L E +D +H AA HV + N E K NI G ++
Sbjct: 69 DPRMRFFIGDVRDLERLNYAL--EGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVI 126
Query: 117 EACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
AC + I + I +STD+ A P N Y ATK ++ L ++
Sbjct: 127 NAC-LKNAISQVIALSTDK--------AA---------NPINLYGATKLCSDKLFVSANN 168
Query: 177 SYGLPVIT---TRGNNVYGPNQFPEKLIPKFI-LLAMKGKPLPI 216
G R NV G ++P F L+ K +PI
Sbjct: 169 FKGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPI 209
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 91.3 bits (226), Expect = 6e-20
Identities = 47/367 (12%), Positives = 95/367 (25%), Gaps = 65/367 (17%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPE---YKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
LI G G I + + L +K+ + + + +++
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-------RTRPAWHEDNPINYVQ 54
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
D++ D L + + H T + S E + N +L+A
Sbjct: 55 CDISDPDDSQAKL--SPLTDVTHVFYVTWANRS--TEQENCEANSKMFRNVLDAVIPNCP 110
Query: 125 -IKRFIHVSTDEVYGETDEDAVVGNHEASQL---LPTNPYSATKAGAEMLVMA-YGRSYG 179
+K + + Y E LP Y E +++ + G
Sbjct: 111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG 170
Query: 180 LPVITTRGNNVYGPNQ-----FPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
L R N++G + L + +GK L G + Y C D
Sbjct: 171 LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230
Query: 235 AFDTIL----HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNP---------------- 274
+ + +N+ + + + F +
Sbjct: 231 IAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMK 290
Query: 275 ----------------DTQIKFVENRPFND-----QRYFLDVQKLKQLGWYERVTWEEGL 313
T++K V F D + + + K K+ G+ +
Sbjct: 291 GKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAF 350
Query: 314 QKTMKWY 320
+
Sbjct: 351 ISWIDKA 357
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 7e-20
Identities = 45/219 (20%), Positives = 80/219 (36%), Gaps = 41/219 (18%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYP-EYKIVVLD-------------------KLDYCS 46
+ +L+TGA GF+ ++ L+ + +++ L +
Sbjct: 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLR 132
Query: 47 NLKNLNPSRLSPNFKFIKGDVASADL----VHFILLTEKIDTIMHFAAQTHVDNSFGNSF 102
+ K L RL + + GD + DL + L E +D I+ AA + + F
Sbjct: 133 HFKELAADRL----EVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELF 187
Query: 103 EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT----- 157
N+ GT L+ T ++K F +VST +V + A + + + PT
Sbjct: 188 G---PNVAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDG 243
Query: 158 ---NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 193
Y +K E+L+ LPV R +
Sbjct: 244 GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 3e-19
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 156 PTN-PYSATK-AGAEMLVMAYGRSYGLPVITTRGNNVYGPN-QFPEK-------LIPKFI 205
PTN PY+ K AG ++ +Y R YG + N+YGP+ F L+ +F
Sbjct: 131 PTNEPYAIAKIAGIKL-CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFH 189
Query: 206 LLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHV---------YNIGTKK 255
+ P + + G G+ +R +L+ +D+A A ++ + N+GT
Sbjct: 190 EATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV 249
Query: 256 ERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQK 315
+ + ++A I K+ + ++ F ++P R LDV +L QLGWY ++ E GL
Sbjct: 250 DCTIRELAQTIAKV--VGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLAS 307
Query: 316 TMKWYISNPD 325
T +W++ N D
Sbjct: 308 TYQWFLENQD 317
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 6e-19
Identities = 41/321 (12%), Positives = 100/321 (31%), Gaps = 55/321 (17%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
ILI G G + + RL +++ L + + + + + DV
Sbjct: 4 SKILIAGC-GDLGLELARRLTAQ--GHEVTGLRR----------SAQPMPAGVQTLIADV 50
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
D + ++ + + +++ A + + + + + G L A + ++
Sbjct: 51 TRPDTLA-SIVHLRPEILVYCVAASEYSDE-----HYRLSYVEGLRNTLSALEGAP-LQH 103
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
VS+ VYG+ E+ + E + + + AE L+ R
Sbjct: 104 VFFVSSTGVYGQEVEEWL---DEDTPPIAKDFSGKRMLEAEALLA------AYSSTILRF 154
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK---GE 244
+ +YGP + ++ P + + ++ +D A ++ +
Sbjct: 155 SGIYGPGRLR--------MIRQAQTPEQWPARNA-WTNRIHRDDGAAFIAYLIQQRSHAV 205
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIK--FVENRPFNDQRYFLDVQKLKQLG 302
+Y + + V D+ + + N+ + L +L G
Sbjct: 206 PERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNK-----K--LSNARLLASG 258
Query: 303 W---YERVTWEEGLQKTMKWY 320
+ Y + G +
Sbjct: 259 YQLIYP--DYVSGYGALLAAM 277
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 7e-19
Identities = 43/252 (17%), Positives = 83/252 (32%), Gaps = 43/252 (17%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRL---SPNFKF 62
K I++ GA+GF+ S + N + G +++ + + +P ++ + + K
Sbjct: 5 KKIVLIGASGFVGSALLNEALNRG----FEVTAVVR----------HPEKIKIENEHLKV 50
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
K DV+S D V + A N N+ + I +++ K
Sbjct: 51 KKADVSSLDEV--------CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKA 102
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
G + RF+ V ++ + E P N KA E + + +
Sbjct: 103 G-VNRFLMVGGAGSLFIAPGLRLMDSGEV----PENILPGVKALGEFYLNFLMKEKEIDW 157
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF-DTILH 241
+ P + + + + G S++ ED A A D + H
Sbjct: 158 VFFSPAADMRP-------GVRTGRYRLGKDDMIVDIVG---NSHISVEDYAAAMIDELEH 207
Query: 242 KGEVGHVYNIGT 253
+ IG
Sbjct: 208 PKHHQERFTIGY 219
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 76.9 bits (189), Expect = 4e-16
Identities = 35/255 (13%), Positives = 77/255 (30%), Gaps = 46/255 (18%)
Query: 9 NILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRLS---PNFKFI 63
I I GA G S + G +++ + + N +++ + +
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRG----HEVTAIVR----------NAGKITQTHKDINIL 47
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+ D+ T+ + Q V +++G S + + ++ L+ T
Sbjct: 48 QKDIFDL-------------TLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV 94
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
R + V ++ + E+ L Y +A A+ L
Sbjct: 95 -SPRLLVVGGAASLQIDEDGNTL--LESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWT 151
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
+ ++ P + + L DG S++ ED A A + +
Sbjct: 152 YISPSAMFEPG-------ERTGDYQIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERP 201
Query: 244 E-VGHVYNIGTKKER 257
+ + + K E
Sbjct: 202 NHLNEHFTVAGKLEH 216
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 1e-14
Identities = 50/281 (17%), Positives = 80/281 (28%), Gaps = 51/281 (18%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSR---LSPNFKF 62
+L+TGA+G V +L ++ L + + +
Sbjct: 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR----------SAQGKEKIGGEADV 52
Query: 63 IKGDVASAD-----------LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYG 111
GD+ AD LV K+ + F + + + G
Sbjct: 53 FIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112
Query: 112 THVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 171
++A K+ G +K + V G T+ D L K AE +
Sbjct: 113 QKNQIDAAKVAG-VKHIVVVG---SMGGTNPD------HPLNKLGNGNILVWKRKAEQYL 162
Query: 172 MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
G P R +K LL K L + R D
Sbjct: 163 ----ADSGTPYTIIR------AGGLLDKEGGVRELLVGKDDELLQTDTKTVPR-----AD 207
Query: 232 VAEAF-DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271
VAE +L + +++G+K E D LFS
Sbjct: 208 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPT-KDFKALFS 247
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 4e-14
Identities = 63/350 (18%), Positives = 112/350 (32%), Gaps = 81/350 (23%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ +L+TGA G + V N + V + + ++
Sbjct: 3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARPKFEQV--------------NL 46
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
++ VH I+ + I+H AA+ D ++ N+ + L + G
Sbjct: 47 LDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG--AF 104
Query: 128 FIHVSTDEV-------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 177
I++S+D V Y E D A P N Y TK E V+
Sbjct: 105 LIYISSDYVFDGTNPPYREEDIPA-----------PLNLYGKTKLDGEKAVLENNLGAAV 153
Query: 178 ------YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231
YG + + + K + K + R + +D
Sbjct: 154 LRIPILYG--EVEKLEES------AVTVMFDK---VQFSNKSANMDHWQ--QRFPTHVKD 200
Query: 232 VAEAFDTILHKGEVG-------HVYNIG--TKKERRVIDVATDICKLFSLNPDTQIKFVE 282
VA + K + H TK ++A I F+L +
Sbjct: 201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQMTK-----YEMACAIADAFNLPSSHLRPITD 255
Query: 283 N------RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDW 326
+ RP N Q LD KL+ LG +R + G+++++ ++ + W
Sbjct: 256 SPVLGAQRPRNAQ---LDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRW 302
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 52/306 (16%), Positives = 99/306 (32%), Gaps = 74/306 (24%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR-----------LENRSQLLADIQNVKPT 434
+ L+ G TG +G + K ++ G G L + + + I + +P
Sbjct: 4 RVLVTGATGLLGRAVHKEFQQNNWHA-VGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPH 62
Query: 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAK 494
+ + A D E + NV + LA G ++ ++ +F
Sbjct: 63 VIVHCAAER---RPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVF----- 114
Query: 495 HPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPI--SSDLNNPRN 551
+GT ++EED P + Y KTK E+ + E LR+ PI +
Sbjct: 115 --DGTNPPYREEDIPAPL-NLYGKTKLDGEKAVLENNLGAAVLRI--PILYGEVEKLEES 169
Query: 552 FIT----KISRYNKVVNI-------P-NSMTILDELLPISV-EMAKRNLSGIWNFTNPGV 598
+T K+ NK N+ P + + ++ M ++ G ++++
Sbjct: 170 AVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQ 229
Query: 599 VSHNEILEMYKAYIDPGFKWTNFTLE--EQAKVIV-------------APR-SNNELDAS 642
++ + + A R N +LD S
Sbjct: 230 MT-----------------KYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCS 272
Query: 643 KLKKEF 648
KL+
Sbjct: 273 KLETLG 278
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 1e-13
Identities = 58/321 (18%), Positives = 108/321 (33%), Gaps = 72/321 (22%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
LITGA+G + + L ++++ + L D+
Sbjct: 2 RTLITGASGQLGIELSRLL---SERHEVIKVYNSSEIQGGYKL--------------DLT 44
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ ++ ++ D I++ AA T VD + K N ++ A K+
Sbjct: 45 DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID--SYI 102
Query: 129 IHVSTDEV-------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSY 178
+H+STD V Y E D NP Y +K E + S
Sbjct: 103 VHISTDYVFDGEKGNYKEED--------------IPNPINYYGLSKLLGETFALQD-DSL 147
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
+I T G ++ F P ++ +GK + S + +A A
Sbjct: 148 ---IIRTSG--IFRNKGF-----PIYVYKTLKEGKTVFAFKG---YYSPISARKLASAIL 194
Query: 238 TILHKGEVG--HVYNIGTKKERRVIDVATDICKLFSLN-----PDTQIKFVENRPFNDQR 290
+L + G HV + ++A I + F+L D ++ RP++
Sbjct: 195 ELLELRKTGIIHVAGERISR----FELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSS- 249
Query: 291 YFLDVQKLKQLGWYERVTWEE 311
LD + +++ + T +
Sbjct: 250 --LDSSRARKILSTDFYTLDL 268
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 3e-13
Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 47/284 (16%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR---------LENRSQLLADIQNVKPTHV 436
+ LI G +G +G LS++ ++ + L + +L I +P +
Sbjct: 2 RTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVI 61
Query: 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHP 496
NAA +T +VD CE K + + N + + +++ +T +F
Sbjct: 62 INAAAMT---DVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVF------- 111
Query: 497 EGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKI 556
+G +KEED PN ++Y +K + E + D+ +R + ++ K
Sbjct: 112 DGEKGNYKEEDIPNPI-NYYGLSKLLGETFALQ-DDSLIIRTSGIFRN--KGFPIYVYKT 167
Query: 557 SRYNKVVNI------PNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSH---NEILEM 607
+ K V P +L +E+ + +GI + + +I E
Sbjct: 168 LKEGKTVFAFKGYYSP---ISARKLASAILELLELRKTGIIHVAGERISRFELALKIKEK 224
Query: 608 Y--KAYIDPGFKWTNFTLEEQAKVIVAPR-SNNELDASKLKKEF 648
+ + A R ++ LD+S+ +K
Sbjct: 225 FNLPGEVKE------VDEVRGWI---AKRPYDSSLDSSRARKIL 259
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.9 bits (170), Expect = 2e-12
Identities = 62/481 (12%), Positives = 141/481 (29%), Gaps = 131/481 (27%)
Query: 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKER--RVIDV----ATDICKLF---SLNPD-- 275
C+DV + +IL K E+ H+ R+ ++ + F L +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 276 ---TQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSG 332
+ IK + +P R +++ + + Q K+ +S + +
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIE---------QRDRLYNDN-QVFAKYNVSRLQPYLKLRQ 142
Query: 333 ALLPHPRTSMAPAIEGKVDGHDTTFMLKINNSSQSRMVVRASKSNSSRQKPFLKFLIYGR 392
ALL + PA +DG +L + + V S + + + F I+
Sbjct: 143 ALL-----ELRPAKNVLIDG-----VLGSGKTWVALDVCL-----SYKVQCKMDFKIF-- 185
Query: 393 TGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCE 452
W+ L + + LE +LL I + + + +
Sbjct: 186 --WLN--LKNCNSPETV--------LEMLQKLLYQI--DPNWTSRSDHSSNIKLRIHSIQ 231
Query: 453 THKPETIRTNVVGT--LTLADVCRENGLLMMNYATGC--------------IFEYDAKHP 496
+++ L L +V N C + H
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL--SCKILLTTRFKQVTDFLSAATTTHI 289
Query: 497 --EGTGIGFKEEDKPNFTGSFYSKTK---------------AMVEELLKE-------YDN 532
+ + ++ + + +++ E +++ + +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 533 VCTLRVRMPISSDLNN--P---RNFITKISRYNKVVNIPNS-MTIL------DELLPISV 580
V ++ I S LN P R ++S + +IP ++++ +++ +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN 409
Query: 581 EMAKRNLSGIWNFTNPGVVS------------------HNEILEMYKAYIDPGFKWTNFT 622
++ K +L +S H I++ Y I F +
Sbjct: 410 KLHKYSLVEKQP--KESTISIPSIYLELKVKLENEYALHRSIVDHYN--IPKTFDSDDLI 465
Query: 623 L 623
Sbjct: 466 P 466
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 9e-12
Identities = 55/341 (16%), Positives = 109/341 (31%), Gaps = 61/341 (17%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLI--GNYPEYKIVV----LDKLDYCSNLKNLNPS 54
M + + + +TGA+GFI S + RL+ G Y + + +L +L +
Sbjct: 1 MGS--QSETVCVTGASGFIGSWLVMRLLERG----YTVRATVRDPTNVKKVKHLLDLPKA 54
Query: 55 RLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV 114
+ K D+A F + + H A ++ E K I G
Sbjct: 55 --ETHLTLWKADLADEG--SFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLG 109
Query: 115 LLEACKITGQIKRFIHVSTDE-VYGETDEDAVV-------GNHEASQLLPTNPYSATKAG 166
++++C ++R + S+ V + + V ++ + Y +K
Sbjct: 110 IMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTL 169
Query: 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMKGKPLPIHGDGS 221
AE Y + + IT V GP I + G
Sbjct: 170 AEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFV 229
Query: 222 NVRSYLYCEDVAEAFDTILHKGEVGHV--YNIGTKKERRVI--------DVATDICKLFS 271
++ D+ A H+ + + R + D+A + + +
Sbjct: 230 HLD------DLCNA-----------HIYLFENPKAEGRYICSSHDCIILDLAKMLREKY- 271
Query: 272 LNPDTQI-KFVENRPFNDQRYFLDVQKLKQLGWYERVTWEE 311
P+ I + N + +KL LG+ + + E+
Sbjct: 272 --PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLED 310
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 60/294 (20%), Positives = 95/294 (32%), Gaps = 66/294 (22%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE----NRSQLLADIQNVKPTHVFNAAG 441
K LI G G +G + K + K + + N + KP V N A
Sbjct: 14 KILITGANGQLGREIQKQLKGKNVEV-IPTDVQDLDITNVLAVNKFFNEKKPNVVINCAA 72
Query: 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGI 501
T VD CE + N +G LA G ++ +T +F+ +AK P
Sbjct: 73 HT---AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP----- 124
Query: 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISSDLNNPRNFITKISRYN 560
E D+ N S Y KTK E +K +R + + NF+ +
Sbjct: 125 -ITEFDEVNPQ-SAYGKTKLEGENFVKALNPKYYIVR----TAWLYGDGNNFVKTMINLG 178
Query: 561 K------VVN----IPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKA 610
K VV+ P T +L + +++ G ++ T G+ S
Sbjct: 179 KTHDELKVVHDQVGTP---TSTVDLARVVLKVIDEKNYGTFHCTCKGICS---------- 225
Query: 611 YIDPGFKWTNFTLE--EQAKVIV-------------APR-SNNELDASKLKKEF 648
W +F +E + V A R + L L+
Sbjct: 226 -------WYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTT 272
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 9e-10
Identities = 66/342 (19%), Positives = 102/342 (29%), Gaps = 99/342 (28%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITGA G + + +L +++ D D D+
Sbjct: 14 KILITGANGQLGREIQKQL--KGKNVEVIPTDVQDL---------------------DIT 50
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V+ +K + +++ AA T VD K N G L A G
Sbjct: 51 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEI 108
Query: 129 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRS 177
+ +STD V E D NP Y TK E V A
Sbjct: 109 VQISTDYVFDGEAKEPITEFD--------------EVNPQSAYGKTKLEGENFVKALNPK 154
Query: 178 YGLPVITT-----RGNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGD--GSNVRSYLYC 229
Y ++ T GNN F K ++ L L + D G+
Sbjct: 155 YY--IVRTAWLYGDGNN------F-----VKTMINLGKTHDELKVVHDQVGTPT----ST 197
Query: 230 EDVAEAFDTILHKGEVG--HVYNIGTKKERRVI---DVATDICKLFSLNPDTQIKFVE-- 282
D+A ++ + G H G + D A +I +L D ++
Sbjct: 198 VDLARVVLKVIDEKNYGTFHCTCKG------ICSWYDFAVEIFRL--TGIDVKVTPCTTE 249
Query: 283 ------NRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMK 318
RP L L+ W+E L++ +
Sbjct: 250 EFPRPAKRPKYSV---LRNYMLELTTGDITREWKESLKEYID 288
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 3e-11
Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 71/297 (23%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE----NRSQLLADIQNVKPTHVFNAAG 441
+ +I G G +G L + + Y + N SQ+ +Q ++P + + A
Sbjct: 7 RVIITGANGQLGKQLQEELNPEEYDI-YPFDKKLLDITNISQVQQVVQEIRPHIIIHCAA 65
Query: 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGI 501
T VD E + N +G +A + G ++ +T +F+ D
Sbjct: 66 YT---KVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEG----- 117
Query: 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPIS---SDLNNPRNFITKIS 557
+ E P + Y +K E+ +KE + +R S N NF+ +
Sbjct: 118 -YDEFHNPAPI-NIYGASKYAGEQFVKELHNKYFIVR----TSWLYGKYGN--NFVKTMI 169
Query: 558 RYNK------VVN----IPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEM 607
R K VV P T + +L + ++ +L G ++ +N G S
Sbjct: 170 RLGKEREEISVVADQIGSP---TYVADLNVMINKLIHTSLYGTYHVSNTGSCS------- 219
Query: 608 YKAYIDPGFKWTNFTLE--EQAKVIV-------------APR-SNNELDASKLKKEF 648
W F + A + V A R + + L+
Sbjct: 220 ----------WFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNG 266
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 59.8 bits (146), Expect = 5e-10
Identities = 69/348 (19%), Positives = 111/348 (31%), Gaps = 98/348 (28%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ ++ITGA G + + L N EY I DK D+
Sbjct: 6 ERVIITGANGQLGKQLQEEL--NPEEYDIYPFDKKL---------------------LDI 42
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ V ++ + I+H AA T VD + N G + A ++ G +
Sbjct: 43 TNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG--AK 100
Query: 128 FIHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGR 176
+++STD V Y E P Y A+K E V
Sbjct: 101 LVYISTDYVFQGDRPEGYDEFH--------------NPAPINIYGASKYAGEQFVKELHN 146
Query: 177 SYGLPVI-------TTRGNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGD--GSNVRSY 226
Y I GNN F K ++ L + + + + D GS
Sbjct: 147 KY---FIVRTSWLYGKYGNN------F-----VKTMIRLGKEREEISVVADQIGSPT--- 189
Query: 227 LYCEDVAEAFDTILHKGEVG--HVYNIGTKKERRVI---DVATDICKLFSLNPDTQ-IKF 280
Y D+ + ++H G HV N G + A I ++ + +
Sbjct: 190 -YVADLNVMINKLIHTSLYGTYHVSNTG------SCSWFEFAKKIFSYANMKVNVLPVST 242
Query: 281 VE-----NRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISN 323
E RP L+ G+ + +WEEGL++ S+
Sbjct: 243 EEFGAAAARPKYSI---FQHNMLRLNGFLQMPSWEEGLERFFIETKSH 287
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 70/355 (19%), Positives = 114/355 (32%), Gaps = 78/355 (21%)
Query: 1 MATVYTP--KNILITGAAGFIASHVCNRLI--GNYPEYKIVV----LDKLDYCSNLKNL- 51
MAT + K + G GF+AS + L+ G Y + D S+L L
Sbjct: 1 MATQHPIGKKTACVVGGTGFVASLLVKLLLQKG----YAVNTTVRDPDNQKKVSHLLELQ 56
Query: 52 NPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYG 111
L K + D+ F D + H A H + + K I G
Sbjct: 57 ELGDL----KIFRADLTDEL--SFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQG 109
Query: 112 THVLLEACKITGQIKRFIHVS------------TDEVYGE---TDEDAVVGNHEASQLLP 156
+++AC +KR I S T V E TD + S P
Sbjct: 110 VVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE-----FLTSAKPP 164
Query: 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP---KFILLAMKGKP 213
T Y A+K AE + + +IT + G + + +P + + G
Sbjct: 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD--VPSSIGLAMSLITGNE 222
Query: 214 LPIHG---DGSNVRSYLYC--EDVAEAFDTILHKGEVGHV--YNIGTKKERRVI------ 260
I+G S EDV A H+ + R +
Sbjct: 223 FLINGMKGMQMLSGSVSIAHVEDVCRA-----------HIFVAEKESASGRYICCAANTS 271
Query: 261 --DVATDICKLFSLNPDTQI--KFVENRPFNDQRYFLDVQKLKQLGWYERVTWEE 311
++A + K + P ++ F + P + + +KL + G+ + EE
Sbjct: 272 VPELAKFLSKRY---PQYKVPTDFGDFPP--KSKLIISSEKLVKEGFSFKYGIEE 321
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 60/372 (16%), Positives = 105/372 (28%), Gaps = 92/372 (24%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLI--GNYPEYKIV--VLDKLDYCSNLKNLNPSRL 56
A + +L+TGA GF+ASHV +L+ G YK+ +NL+ ++
Sbjct: 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHG----YKVRGTARS-ASKLANLQKRWDAKY 59
Query: 57 SPNFKF-IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL 115
F+ + D+ + + + + H A+ N E I GT
Sbjct: 60 PGRFETAVVEDMLKQG--AYDEVIKGAAGVAHIASVVSFSN---KYDEVVTPAIGGTLNA 114
Query: 116 LEACKITGQIKRFIHVS------------TDEVYGETD-----EDAVVGNHEASQLLPTN 158
L A T +KRF+ S E D E+
Sbjct: 115 LRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLW 174
Query: 159 PYSATKAGAEMLVMAY----GRSYGLPVITTRGNN---VYGPNQFPEKLIP---KFILLA 208
Y+A+K AE+ + + L + G PE +++
Sbjct: 175 VYAASKTEAELAAWKFMDENKPHFTLNAV-----LPNYTIGTIFDPETQSGSTSGWMMSL 229
Query: 209 MKGKP---LPIHGDGS--NVRSYLYCEDVAEAFDTILH---------KGE----VGHVYN 250
G+ L + + D+ H + ++
Sbjct: 230 FNGEVSPALALMPPQYYVSAV------DIGLL-----HLGCLVLPQIERRRVYGTAGTFD 278
Query: 251 IGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV----QKLKQLGWYER 306
V KL+ P + D + LK LG
Sbjct: 279 WN--------TVLATFRKLY---PSKTFP-ADFPDQGQDLSKFDTAPSLEILKSLGRPGW 326
Query: 307 VTWEEGLQKTMK 318
+ EE ++ +
Sbjct: 327 RSIEESIKDLVG 338
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 1e-09
Identities = 70/344 (20%), Positives = 120/344 (34%), Gaps = 78/344 (22%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYPEYKIVV-----LDKLDYCSNLKNLNPSRLSPNF 60
+ +TG GF+ S + L+ G Y + ++ S L NL + S
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENG----YSVNTTIRADPERKRDVSFLTNLPGA--SEKL 55
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
F D+++ D F E I H A+ S TK + G +L+AC
Sbjct: 56 HFFNADLSNPD--SFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACV 112
Query: 121 ITGQIKRFIHVST----------DEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGA 167
+ +KRFI+ S+ +V E +D D S Y+ +K A
Sbjct: 113 NSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVD-----LLRSVKPFGWNYAVSKTLA 167
Query: 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP---KFILLAMKGKPLPIHGDGS--- 221
E V+ +G G+ V+T + G P+ +P + L+ + GK G
Sbjct: 168 EKAVLEFGEQNGIDVVTLILPFIVGRFVCPK--LPDSIEKALVLVLGKK-EQIGVTRFHM 224
Query: 222 -NVRSYLYCEDVAEAFDTILHKGEVGHV-----------YNIGTKKERRVIDVATDICKL 269
+V DVA A H+ Y + + +++ +
Sbjct: 225 VHVD------DVARA-----------HIYLLENSVPGGRY-NCSPFIVPIEEMSQLLSAK 266
Query: 270 FSLNPDTQI--KFVENRPFNDQRYFLDVQKLKQLGWYERVTWEE 311
+ P+ QI + L+ +KL G+ + T E+
Sbjct: 267 Y---PEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIED 307
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 2e-09
Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 14/139 (10%)
Query: 50 NLNPSRLS-----PNFKFIKGDVASADLVHFILLTEKI--DTIMHFAAQTHVDNSFGNSF 102
+ RL + ++ GD+A D K + + AAQ+ V S+
Sbjct: 50 SDTRWRLRELGIEGDIQYEDGDMA--DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQP- 106
Query: 103 EFTKN-NIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161
T + G LLEA + RF ST E++G E + P +PY
Sbjct: 107 VTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA---ERQDENTPFYPRSPYG 163
Query: 162 ATKAGAEMLVMAYGRSYGL 180
K + + Y S+GL
Sbjct: 164 VAKLYGHWITVNYRESFGL 182
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 7e-09
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 52 NPSRLSPNFKFIKGDVASADLVHFILLTEKI--DTIMHFAAQTHVDNSFGNSFEFTKN-N 108
+P +P F GD++ D + + ++ D + + A +HV SF + E+T + +
Sbjct: 49 DPHTCNPKFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVD 105
Query: 109 IYGTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166
GT LLEA + G K RF ST E+YG E + E + P +PY+ K
Sbjct: 106 AMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKLY 162
Query: 167 AEMLVMAYGRSYGL 180
A + + Y SYG+
Sbjct: 163 AYWITVNYRESYGM 176
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 58 PNFKFIKGDVASADLVHFILLTEKI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 114
+ K I D+ + + I EK+ D + + AAQ+ V SF T + G
Sbjct: 52 NDVKIIHMDLL--EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQP-ILTAEVDAIGVLR 108
Query: 115 LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 174
+LEA + +F ST E++G+ E + E + P +PY+ K + + Y
Sbjct: 109 ILEALRTVKPDTKFYQASTSEMFGKVQE---IPQTEKTPFYPRSPYAVAKLFGHWITVNY 165
Query: 175 GRSYGL 180
+Y +
Sbjct: 166 REAYNM 171
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-08
Identities = 35/181 (19%), Positives = 56/181 (30%), Gaps = 47/181 (25%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
NIL+ G G + + L + + ++C GD +
Sbjct: 2 NILLFGKTGQVGWELQRSL-APVGNLIALDVHSKEFC-------------------GDFS 41
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V + + D I++ AA T VD + N + +A TG
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWV 99
Query: 129 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRS 177
+H STD V + ETD T+P Y TK E +
Sbjct: 100 VHYSTDYVFPGTGDIPWQETD--------------ATSPLNVYGKTKLAGEKALQDNCPK 145
Query: 178 Y 178
+
Sbjct: 146 H 146
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 6e-07
Identities = 54/296 (18%), Positives = 99/296 (33%), Gaps = 55/296 (18%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE------NRSQLLADIQNVKPTHVFNA 439
L++G+TG +G L + G E N + ++ ++P + NA
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNA 61
Query: 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGT 499
A T VD E+ N +A E G +++Y+T +F P
Sbjct: 62 AAHT---AVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP--- 115
Query: 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISSDLNNPRNFITKISR 558
++E D + Y KTK E+ L++ R + NF + R
Sbjct: 116 ---WQETDATSPLN-VYGKTKLAGEKALQDNCPKHLIFRTSWVYAG---KGNNFAKTMLR 168
Query: 559 YNK------VVN----IP-NSMTILDELLP-ISVEMAKRNLSGIWNFTNPGVVS-H---N 602
K V+N P + + D I V + K ++G+++ G + H
Sbjct: 169 LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAA 228
Query: 603 EILEMYKAYIDPGFKWTNFTLEEQAKVI---------VAPR-SNNELDASKLKKEF 648
+ + + ++ A R N+ L+ K ++ F
Sbjct: 229 LVFDEARK---------AGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNF 275
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 28/179 (15%), Positives = 48/179 (26%), Gaps = 40/179 (22%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL----DKLDYCSNLKNLNPSRLSPNFK 61
K I I GA G + + Y++ VL +L PS
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRL----------PSEGPRPAH 49
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY--GTHVLLEAC 119
+ GDV A V A Q V G + + + G ++ A
Sbjct: 50 VVVGDVLQAADVDK-----------TVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAM 98
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
K G + + + ++ A + + ++ G Y
Sbjct: 99 KAHG-VDKVVACTS----------AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKY 146
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 42/241 (17%), Positives = 79/241 (32%), Gaps = 39/241 (16%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLI-GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPN 59
M + IL+ GA G+I HV + +P + +V S L S +
Sbjct: 1 MGS---RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG 57
Query: 60 FKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 119
+ G + + + + +D ++ ++ +++A
Sbjct: 58 ANIVHGSIDDHASLVEAV--KNVDVVISTVGSLQIE---------------SQVNIIKAI 100
Query: 120 KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
K G +KRF +G D D V + P KA + A G Y
Sbjct: 101 KEVGTVKRFFPSE----FG-NDVDNV------HAVEPAKSVFEVKAKVRRAIEAEGIPY- 148
Query: 180 LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239
T +N + + + + + L A + I GDG+ ++ ED+
Sbjct: 149 ----TYVSSNCFA--GYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA 202
Query: 240 L 240
+
Sbjct: 203 V 203
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-08
Identities = 44/212 (20%), Positives = 75/212 (35%), Gaps = 26/212 (12%)
Query: 113 HVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVM 172
+ + Q + ++ST VYG+ D V E + L PT + AE
Sbjct: 83 ALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVD---ETTPLTPTAARGRWRVMAEQQWQ 139
Query: 173 AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232
A LP+ R +YGP + P + + V S ++ ED+
Sbjct: 140 A---VPNLPLHVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDI 188
Query: 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYF 292
A+ + + + G VYN+ + DV +L L + F + R F
Sbjct: 189 AQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSF 248
Query: 293 ------LDVQKLKQ-LGW---YERVTWEEGLQ 314
+ ++K+ LG Y + GL+
Sbjct: 249 YSENKRVRNDRIKEELGVRLKYP--NYRVGLE 278
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-08
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 54 SRLSPNFKFIKGDVASADLVHFILLTEKI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIY 110
+ + N K GD+ D + + ++ I + AQ+HV SF + E+T + +
Sbjct: 75 AHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGV 131
Query: 111 GTHVLLEACKITGQIK--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168
GT LL+A K G I +F ST E+YG+ E + E + P +PY A K A
Sbjct: 132 GTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAY 188
Query: 169 MLVMAYGRSYGL 180
+V+ + +Y L
Sbjct: 189 WIVVNFREAYNL 200
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 9e-08
Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 57/253 (22%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS--PNFKFIKGD 66
I I G+ G + + L +Y+I + ++ N K + D
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTT--DYQIYAGAR----------KVEQVPQYNNVKAVHFD 49
Query: 67 VA--SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
V ++ + +D I++ + S G S ++YG L++A +
Sbjct: 50 VDWTPEEMAKQL---HGMDAIINVSG------SGGKSLLKV--DLYGAVKLMQAAEKAE- 97
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+KRFI +ST + +G + Y K A++ + + L
Sbjct: 98 VKRFILLST---IFSLQPEKWIG----AGFDALKDYYIAKHFADLYLT---KETNLDYTI 147
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
+ P E+ I + SN DVA+ ++
Sbjct: 148 IQ------PGALTEEEATGLIDIND-------EVSASNTI-----GDVADTIKELVMTDH 189
Query: 245 -VGHVYNIGTKKE 256
+G V ++ K
Sbjct: 190 SIGKVISMHNGKT 202
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 50/266 (18%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF 60
M ILI G G+I +H+ + + V + + S+ L S
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPN--SSKTTLLDEFQSLGA 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+KG++ + + ++ +K+D ++ A + +LEA K
Sbjct: 61 IIVKGELDEHEKLVELM--KKVDVVISALAFPQIL---------------DQFKILEAIK 103
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
+ G IKRF+ +G +ED + + L P K ++ +
Sbjct: 104 VAGNIKRFLPSD----FG-VEEDRI------NALPPFEALIERKR----MIRRAIEEANI 148
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240
P N F I + + ++G G + Y +D+ +
Sbjct: 149 PYT------YVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA 202
Query: 241 HKGEVGHVYNIGTKKERRVIDVATDI 266
+ +T+I
Sbjct: 203 TDPR--------ALNRVVIYRPSTNI 220
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 39/259 (15%), Positives = 77/259 (29%), Gaps = 61/259 (23%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
+L+ GA G +A ++ + L ++ V + + N + +
Sbjct: 20 QGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVR----------NEEQGPELRERGAS 67
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY-----GTHVLLEACK 120
D+ A+ L E FA+ V + G+ + G ++ +
Sbjct: 68 DIVVAN------LEEDFSH--AFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAE 119
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G IKRFI VS+ G D D + Y K A+ + + L
Sbjct: 120 KRG-IKRFIMVSS---VGTVDPDQG--------PMNMRHYLVAKRLADDEL----KRSSL 163
Query: 181 PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPL--PIHGDGSNVRSYLYCEDVAEAFDT 238
R P + + ++ + I DVA+
Sbjct: 164 DYTIVR------PGPLSNEESTGKVTVSPHFSEITRSITR-----------HDVAKVIAE 206
Query: 239 ILHKGE-VGHVYNIGTKKE 256
++ + +G + +
Sbjct: 207 LVDQQHTIGKTFEVLNGDT 225
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 36/236 (15%)
Query: 8 KNILITGAAGFIASHVCNRLI-GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
+ I+I G G+I + + ++P + D + L S I+G+
Sbjct: 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + +L +++D ++ + + ++ A K G IK
Sbjct: 65 MEEHEKMVSVL--KQVDIVISALPFPMISSQIH---------------IINAIKAAGNIK 107
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
RF+ +G +ED + L P K ++ + LP T
Sbjct: 108 RFLPSD----FG-CEEDRI------KPLPPFESVLEKKR----IIRRAIEAAALPY-TYV 151
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242
N + + + + + I+G G Y ED+A+ +
Sbjct: 152 SANCF--GAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACD 205
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 3e-07
Identities = 21/246 (8%), Positives = 67/246 (27%), Gaps = 38/246 (15%)
Query: 9 NILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD 66
I + GA G S + G ++++ + + +P + +
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRG----HEVLAVVR----------DPQKAADRLGATVAT 47
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ LV + +D ++ + ++ L+ + +
Sbjct: 48 LVKEPLVLTEADLDSVDAVVDALS-------VPWGSGRGYLHLDFATHLVSLLRNSD-TL 99
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
+ + + + ++ + + + P+ + + I
Sbjct: 100 AVFILGSASLAMPGADHPMIL--DFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF-DTILHKGEV 245
+ + + L + DG +S++ ++A A D + H +
Sbjct: 158 PSEAFPSGPATSYVAG--------KDTLLVGEDG---QSHITTGNMALAILDQLEHPTAI 206
Query: 246 GHVYNI 251
+
Sbjct: 207 RDRIVV 212
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 9e-07
Identities = 44/256 (17%), Positives = 77/256 (30%), Gaps = 68/256 (26%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
TPK +L+ GA G H+ +R++ K++ P G
Sbjct: 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP----------ARKALAEHPRLDNPVG 53
Query: 66 DV--------ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 117
+ S D F L I A VD F+ + +
Sbjct: 54 PLAELLPQLDGSIDTA-FCCLGTTIKEAGSEEAFRAVD------FDLPLA-------VGK 99
Query: 118 ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 177
G + ++ VS A+ + ++S Y+ K E + +
Sbjct: 100 RALEMG-ARHYLVVS-----------ALGADAKSS-----IFYNRVKGELEQAL----QE 138
Query: 178 YGLPVIT-TRGNNVYGP--NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
G P +T R + ++GP +++ I + GK I D+A
Sbjct: 139 QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEA-----------CDLAR 187
Query: 235 AF-DTILHKGEVGHVY 249
A L +G+
Sbjct: 188 ALWRLALEEGKGVRFV 203
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 14/130 (10%)
Query: 58 PNFKFIKGDVASADLVHFILLTEKI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHV 114
K D+ D + I D + + AAQ+HV SF ++T + G
Sbjct: 83 ALMKLHYADLT--DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALR 139
Query: 115 LLEACKITGQIK----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEML 170
LLEA + ++ + E++G T E + P +PY+A+K A
Sbjct: 140 LLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHPRSPYAASKCAAHWY 195
Query: 171 VMAYGRSYGL 180
+ Y +YGL
Sbjct: 196 TVNYREAYGL 205
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 42/247 (17%), Positives = 74/247 (29%), Gaps = 44/247 (17%)
Query: 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL------DKLDYCSNLKNLNPS 54
M +LI G G+I + N I + VL +D L
Sbjct: 1 MDK---KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFK-- 53
Query: 55 RLSPNFKFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV 114
K I+ + + L +++D ++ A + ++I
Sbjct: 54 --QLGAKLIEASLDDHQRLVDAL--KQVDVVISALAGGVLS-----------HHILEQLK 98
Query: 115 LLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 174
L+EA K G IKRF+ +G + + L P + K
Sbjct: 99 LVEAIKEAGNIKRFLPSE----FG------MDPDIMEHALQPGSITFIDKRKVR----RA 144
Query: 175 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234
+ +P N G F L + + I+GDG+ ++ +DV
Sbjct: 145 IEAASIPYTYVSSNMFAG--YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202
Query: 235 AFDTILH 241
+
Sbjct: 203 YTIKSID 209
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 37/232 (15%)
Query: 6 TPKNILITGAAGFIASHVCNRLI-GNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFI 63
T ILI G G I H+ I P Y +V + L + S +
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
+GD+ + + + +++D + A + I +++A K G
Sbjct: 61 EGDINDHETLVKAI--KQVDIV--ICAAGRLL-------------IEDQVKIIKAIKEAG 103
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+K+F +G + + P KA ++ + G+P
Sbjct: 104 NVKKFFPSE----FG-------LDVDRHDAVEPVRQVFEEKASIRRVI----EAEGVPYT 148
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235
+ + + + + + I GDG+ +Y+ DV
Sbjct: 149 YLCCHAFT---GYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF 197
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 4e-06
Identities = 51/252 (20%), Positives = 80/252 (31%), Gaps = 60/252 (23%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVL----DKLDYCSNLKNLNPSRLSPNFKFI 63
KN+LI GA G IA HV N+L + K + K+ N + I
Sbjct: 24 KNVLILGAGGQIARHVINQLA-DKQTIKQTLFARQPAKI----------HKPYPTNSQII 72
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
GDV + + + + D + +A T D + ++ A K
Sbjct: 73 MGDVLNHAALKQAM--QGQDIV--YANLTGEDLD------------IQANSVIAAMKACD 116
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 183
+KR I V + +Y E V N+ A + + GL
Sbjct: 117 -VKRLIFVLSLGIYDEVPGKFVEWNNAV-----IGEPLKPFRRAADAI----EASGLEYT 166
Query: 184 TTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV-RSYLYCEDVAEAFDTILHK 242
R P ++ I + L + G+ V R + VA I+ K
Sbjct: 167 ILR------PAWLTDEDIIDYELTSRNEP-----FKGTIVSR-----KSVAALITDIIDK 210
Query: 243 GE--VGHVYNIG 252
E +G I
Sbjct: 211 PEKHIGENIGIN 222
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 8e-05
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 36/172 (20%)
Query: 8 KNILITGAAGFIASHVCNRLI--GNYPEYKIVVLDKLDYCS-NLKNLNPSRLSP-NFKFI 63
K++ I GA+G + ++ G + + ++ KL + KN+N +
Sbjct: 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDY 78
Query: 64 KGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG 123
D+ F L T A + F + + E K G
Sbjct: 79 ASAFQGHDVG-FCCLG----TTRGKA----------GAEGFVRVDRDYVLKSAELAKAGG 123
Query: 124 QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 175
K F +S+ G ++S Y K E V
Sbjct: 124 -CKHFNLLSS------------KGADKSS----NFLYLQVKGEVEAKVEELK 158
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 6e-04
Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 45/172 (26%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGI----------PFEYGKGRLENRSQLLADIQNVK--- 432
I G +G G +L K ++G+ + + +N +Q + D + +
Sbjct: 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA 79
Query: 433 -----PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGC 487
F G T + +R + L A++ + G N +
Sbjct: 80 SAFQGHDVGFCCLGTTRG------KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS- 132
Query: 488 IFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE--YDNVCTLR 537
+G Y + K VE ++E +D R
Sbjct: 133 ---------KGADKSSN---------FLYLQVKGEVEAKVEELKFDRYSVFR 166
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 37/239 (15%), Positives = 66/239 (27%), Gaps = 34/239 (14%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKG 65
+LI GA GFI V + + I+ S K + G
Sbjct: 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYG 67
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
+ + + IL +ID ++ + L++A K G I
Sbjct: 68 LINEQEAMEKILKEHEIDIVVSTVGGESIL---------------DQIALVKAMKAVGTI 112
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
KRF+ D + A + P K G+P
Sbjct: 113 KRFLPSEFG-----HDVN------RADPVEPGLNMYREKRRVR----QLVEESGIPFTYI 157
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
N++ +P + I+GDG+ ++ D+ + +
Sbjct: 158 CCNSIAS---WPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR 213
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 676 | |||
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.98 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.98 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.98 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.98 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.98 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.98 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.98 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.96 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.96 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.94 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.94 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.94 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.94 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.94 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.94 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.93 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.92 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.92 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.92 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.91 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.91 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.9 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.89 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.89 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.89 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.89 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.89 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.89 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.89 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.89 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.88 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.88 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.88 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.88 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.88 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.87 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.87 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.87 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.87 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.87 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.87 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.87 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.87 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.87 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.86 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.86 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.86 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.86 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.86 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.85 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.85 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.85 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.85 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.85 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.85 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.85 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.85 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.85 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.85 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.85 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.85 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.85 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.85 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.85 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.85 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.85 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.85 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.84 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.84 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.84 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.84 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.84 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.84 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.84 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.84 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.84 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.84 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.84 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.84 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.84 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.84 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.84 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.84 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.84 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.84 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.84 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.84 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.84 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.84 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.83 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.83 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.83 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.83 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.83 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.83 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.83 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.83 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.83 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.83 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.83 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.83 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.83 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.83 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.83 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.83 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.83 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.83 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.83 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.83 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.83 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.83 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.83 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.83 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.83 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.82 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.82 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.82 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.82 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.82 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.82 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.82 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.82 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.82 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.82 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.82 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.82 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.82 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.82 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.82 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.82 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.82 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.82 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.82 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.82 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.82 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.82 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.82 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.82 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.82 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.82 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.82 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.82 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.82 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.82 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.82 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.81 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.81 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.81 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.81 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.81 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.81 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.81 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.81 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.81 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.81 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.81 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.81 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.81 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.81 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.81 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.81 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.81 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.81 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.81 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.81 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.81 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.81 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.81 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.81 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.81 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.81 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.8 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.8 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.8 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.8 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.8 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.8 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.8 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.8 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.8 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.79 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.79 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.79 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.79 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.79 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.79 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.79 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.79 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.79 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.79 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.79 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.79 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.79 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.78 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.78 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.78 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.78 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.78 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.78 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.78 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.78 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.78 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.78 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.77 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.77 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.77 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.77 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.77 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.77 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.76 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.76 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.76 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.76 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.76 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.76 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.76 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.76 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.75 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.75 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.75 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.75 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.75 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.75 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.74 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.74 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.74 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.74 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.74 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.74 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.74 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.74 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.74 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.74 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.74 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.74 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.74 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.73 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.73 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.73 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.73 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.73 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.73 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.72 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.72 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.72 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.72 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.72 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.72 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.72 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.72 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.72 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.72 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.72 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.72 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.72 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.72 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.72 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.72 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.72 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.72 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.72 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.72 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.71 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.71 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.71 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.71 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.71 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.71 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.71 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.71 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.71 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.71 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.71 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.71 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.71 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.71 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.7 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.7 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.7 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.7 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.7 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.7 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.7 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.7 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.7 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.7 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.7 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.7 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.7 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.7 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.7 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.7 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.7 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.7 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.7 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.7 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.7 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.7 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.7 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.69 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.69 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.69 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.69 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.69 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.69 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.69 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.69 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.69 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.69 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.69 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.69 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.69 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.68 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.68 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.68 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.68 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.68 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.68 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.68 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.68 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.68 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.68 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.68 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.68 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.68 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.68 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.68 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.68 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.68 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.67 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.67 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.67 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.67 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.67 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.67 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.67 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.67 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.67 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.67 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.67 |
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=381.90 Aligned_cols=322 Identities=41% Similarity=0.752 Sum_probs=272.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++|+|||||||||||++|++.|+++|+.++|++++|.........+.......+++++.+|+.|++.+.+++...++|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 34579999999999999999999999777999999987543333333333344689999999999999999996556999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+......+..++...++.|+.++.+|+++|++.+ +++|||+||.++|+..... ....|+++..|.++|+.+|
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~--~~~~E~~~~~p~~~Y~~sK 178 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKT--GRFTEETPLAPNSPYSSSK 178 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSS--CCBCTTSCCCCCSHHHHHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcC--CCcCCCCCCCCCChhHHHH
Confidence 999999987666667788899999999999999999987 8999999999999987422 2337888889999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+|.+++.++++++++++++||+.||||+..+..+++.++..+..+.++.+++++.+.++|+|++|+|++++.+++++.
T Consensus 179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 258 (346)
T 4egb_A 179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 258 (346)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 99999999999888999999999999999987778899999999999999999999999999999999999999999887
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCcccCCHHHHHHHHHHHHhhC
Q 005818 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.+++||+++++++|+.|+++.+.+.+|.+.+. +.+.+..+.....+.+|.+|++ .|||+|+++++++|+++++||+++
T Consensus 259 ~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (346)
T 4egb_A 259 VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKD-IEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN 337 (346)
T ss_dssp TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGG-CEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCceeHHHHHHHHHHHhCCCccc-ccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 88899999999999999999999999986542 4444555555567789999998 599999999999999999999999
Q ss_pred CCCcccc
Q 005818 324 PDWWGDV 330 (676)
Q Consensus 324 ~~~~~~~ 330 (676)
..||+..
T Consensus 338 ~~~~~~~ 344 (346)
T 4egb_A 338 EEWWKPL 344 (346)
T ss_dssp HHHHGGG
T ss_pred hhhhhhc
Confidence 8888764
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=366.15 Aligned_cols=329 Identities=41% Similarity=0.719 Sum_probs=266.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+|||||||||||++|++.|+++|++++|++++|.........+.......+++++.+|++|++++.+++ .++|+
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~ 78 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV--RKVDG 78 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH--HTCSE
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh--hCCCE
Confidence 4457899999999999999999999976799999988642222222221112457999999999999999998 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+......+.+++...+++|+.++.+++++|...+..++|||+||.++||.....+ .+|+.+..|.++|+.+|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~---~~E~~~~~~~~~Y~~sK 155 (336)
T 2hun_A 79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS---FTENDRLMPSSPYSATK 155 (336)
T ss_dssp EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC---BCTTBCCCCCSHHHHHH
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC---cCCCCCCCCCCccHHHH
Confidence 999999876444456778899999999999999999876347999999999999765333 36777788889999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+|.+++.++++++++++++||+.||||+..+..+++.++..+..+..+++++++.+.++++|++|+|++++.+++++.
T Consensus 156 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~ 235 (336)
T 2hun_A 156 AASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE 235 (336)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence 99999999999888999999999999999976667788888888888888888888899999999999999999998777
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.+++||++++.++|+.|+++.+++.+|.+.+ .+.+.+.++.....+.+|++|+++ |||+|+++++++|+++++||+++
T Consensus 236 ~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 236 SREIYNISAGEEKTNLEVVKIILRLMGKGEE-LIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp TTCEEEECCSCEECHHHHHHHHHHHTTCCST-TEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred CCCEEEeCCCCcccHHHHHHHHHHHhCCCcc-cccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 7889999999999999999999999998643 234444444444456789999985 99999999999999999999987
Q ss_pred CCCcccccccCCCCCc
Q 005818 324 PDWWGDVSGALLPHPR 339 (676)
Q Consensus 324 ~~~~~~~~~~~~~~~~ 339 (676)
..|++........+|+
T Consensus 315 ~~~~~~~~~~~~~~~~ 330 (336)
T 2hun_A 315 EWWWKPLVDERILHPT 330 (336)
T ss_dssp HHHHGGGCCSTTTCSS
T ss_pred ccceeeccCCceecCC
Confidence 6666554433333333
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=355.37 Aligned_cols=302 Identities=20% Similarity=0.272 Sum_probs=255.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|+|||||||||||++|++.|+++ +++|++++|... . .. ..+++++.+|+. .+++.+++ .++|+|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~-~-~~-------~~~~~~~~~Dl~-~~~~~~~~--~~~d~V 66 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIG-N-KA-------INDYEYRVSDYT-LEDLINQL--NDVDAV 66 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHT--TTCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCC-c-cc-------CCceEEEEcccc-HHHHHHhh--cCCCEE
Confidence 3579999999999999999999999 689999998621 1 11 127899999999 99999998 699999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
||+|+..... ++...++.|+.++.+++++|++.+ +++|||+||.++|+.....+. .|+++..|.++|+.+|.
T Consensus 67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~---~E~~~~~p~~~Y~~sK~ 138 (311)
T 3m2p_A 67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPW---NEKELPLPDLMYGVSKL 138 (311)
T ss_dssp EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSB---CTTSCCCCSSHHHHHHH
T ss_pred EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCC---CCCCCCCCCchhHHHHH
Confidence 9999987653 556788999999999999999987 899999999999998765443 77888889999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
.+|++++.++++++++++++||+.+|||+..+..++..++..+..+..+.+++++.+.++|+|++|+|++++.+++++..
T Consensus 139 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~ 218 (311)
T 3m2p_A 139 ACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV 218 (311)
T ss_dssp HHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC
Confidence 99999999998889999999999999999866688999999999999999889999999999999999999999998777
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC-CCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN-RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
+++||+++++++|+.|+++.+++.+|.+.. +...+. .+.......+|.+|+++ |||+|+++++++|+++++|+++.
T Consensus 219 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 296 (311)
T 3m2p_A 219 SGTFNIGSGDALTNYEVANTINNAFGNKDN--LLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL 296 (311)
T ss_dssp CEEEEECCSCEECHHHHHHHHHHHTTCTTC--EEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred CCeEEeCCCCcccHHHHHHHHHHHhCCCCc--ceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence 889999999999999999999999998754 333333 44455677899999986 99999999999999999999998
Q ss_pred CCCccccc
Q 005818 324 PDWWGDVS 331 (676)
Q Consensus 324 ~~~~~~~~ 331 (676)
.+.|....
T Consensus 297 ~~~~~~~~ 304 (311)
T 3m2p_A 297 DDVPLWYE 304 (311)
T ss_dssp --------
T ss_pred ccCcceec
Confidence 87666544
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=356.41 Aligned_cols=317 Identities=38% Similarity=0.708 Sum_probs=264.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHc-CCC---cEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGN-YPE---YKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~-g~~---~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
|+|||||||||||++|++.|+++ +++ ++|++++|.........+.......+++++.+|++|++++.+++ .++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh--cCCC
Confidence 47999999999999999999995 656 89999988642111111111112357999999999999999998 7999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|||+|+......+.+++...+++|+.++.+++++|+..+ +++|||+||.++||.....+ .+|+.+..|.++|+.+
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~---~~E~~~~~~~~~Y~~s 154 (337)
T 1r6d_A 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGS---WTESSPLEPNSPYAAS 154 (337)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSC---BCTTSCCCCCSHHHHH
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCC---CCCCCCCCCCCchHHH
Confidence 9999999876444445677899999999999999999987 88999999999998765332 3677778889999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|..+|.+++.++++++++++++||+.+|||+..+..+++.++..+..+..+.+++++.+.++|+|++|+|++++.+++++
T Consensus 155 K~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 234 (337)
T 1r6d_A 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (337)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence 99999999999888899999999999999998666778888888888888888898999999999999999999999877
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 244 ~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
..+++||+++++++|+.|+++.+.+.+|.+.+ .+.+.+..+.....+.+|++|+++ |||+|+++++++|+++++||++
T Consensus 235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 313 (337)
T 1r6d_A 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (337)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGG-GEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcc-cceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 67889999999999999999999999998643 234444444344456789999975 9999999999999999999998
Q ss_pred CCCCccccc
Q 005818 323 NPDWWGDVS 331 (676)
Q Consensus 323 ~~~~~~~~~ 331 (676)
+..||+...
T Consensus 314 ~~~~~~~~~ 322 (337)
T 1r6d_A 314 NRGWWEPLK 322 (337)
T ss_dssp CHHHHGGGC
T ss_pred chhcccccc
Confidence 877776643
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=361.07 Aligned_cols=311 Identities=26% Similarity=0.414 Sum_probs=262.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCC---CCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSR---LSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~---~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|++|+|||||||||||++|++.|+++ +++|++++|....... ..+.... ...+++++.+|+.|++++.+++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 98 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-- 98 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 45789999999999999999999999 6889999886532110 0000000 0058999999999999999999
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCCh
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 159 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 159 (676)
.++|+|||+|+......+..++...++.|+.++.+|+++|++.+ +++|||+||.++|+.....+. +|+++..|.++
T Consensus 99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~p~~~ 174 (351)
T 3ruf_A 99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPK---VEENIGNPLSP 174 (351)
T ss_dssp TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSB---CTTCCCCCCSH
T ss_pred cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCC---ccCCCCCCCCh
Confidence 69999999999877666667788899999999999999999987 899999999999998765443 78888899999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|+.+|..+|++++.+++++|++++++||++||||+..+. .+++.++..+..+..+.+++++.+.++|+|++|+|++
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999999999988899999999999999987654 6788899999999999999999999999999999999
Q ss_pred HHHHHhc--CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceeeecCCCCCCcccccCHHHHHh-CCCcccCCH
Q 005818 236 FDTILHK--GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT---QIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTW 309 (676)
Q Consensus 236 i~~~~~~--~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~ 309 (676)
++.+++. ...+++||+++++++|+.|+++.+++.+|..+.. .+.+.+..+.......+|.+|+++ |||+|++++
T Consensus 255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 334 (351)
T 3ruf_A 255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKI 334 (351)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCH
T ss_pred HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCH
Confidence 9999987 3467899999999999999999999999984321 122333344445667899999986 999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005818 310 EEGLQKTMKWYISN 323 (676)
Q Consensus 310 ~~~l~~~~~~~~~~ 323 (676)
+++|+++++||+++
T Consensus 335 ~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 335 REGLRLSMPWYVRF 348 (351)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999864
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=353.25 Aligned_cols=317 Identities=38% Similarity=0.638 Sum_probs=262.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
||+|||||||||||++|++.|++++++++|++++|.........+. .....+++++.+|++|++++.+++ .++|+||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 80 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVDKLA--AKADAIV 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCHHHHHHHh--hcCCEEE
Confidence 5799999999999999999999997778999998864221111111 111357999999999999999999 6789999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC---------cCCCCCCCCCCCCC
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED---------AVVGNHEASQLLPT 157 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~---------~~~~~~e~~~~~p~ 157 (676)
|+|+......+..++...+++|+.++.+++++|...+ + +|||+||.++||..... .....+|+++..|.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 158 (348)
T 1oc2_A 81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 158 (348)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC
Confidence 9999876544456777899999999999999999987 6 99999999999875320 01234677777888
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~ 237 (676)
++|+.+|..+|.+++.++++++++++++||+.+|||+..+..+++.++..+..+..+.+++++.+.++++|++|+|++++
T Consensus 159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 238 (348)
T 1oc2_A 159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 238 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence 99999999999999999888899999999999999998666778888888888888888888899999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCC-HHHHHHH
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVT-WEEGLQK 315 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~-~~~~l~~ 315 (676)
.+++++..+++||++++.++|+.|+++.+.+.+|.+.+ .+.+.+.++.....+.+|++|+++ |||+|+++ ++++|++
T Consensus 239 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~ 317 (348)
T 1oc2_A 239 AILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEE 317 (348)
T ss_dssp HHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHH
T ss_pred HHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc-ccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHH
Confidence 99987767889999999999999999999999998653 233344444444556789999985 99999998 9999999
Q ss_pred HHHHHhhCCCCccc
Q 005818 316 TMKWYISNPDWWGD 329 (676)
Q Consensus 316 ~~~~~~~~~~~~~~ 329 (676)
+++|++++..||..
T Consensus 318 ~~~~~~~~~~~~~~ 331 (348)
T 1oc2_A 318 TIQWYTDNQDWWKA 331 (348)
T ss_dssp HHHHHHHTHHHHHH
T ss_pred HHHHHHHhhhhccc
Confidence 99999987655543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-42 Score=348.31 Aligned_cols=298 Identities=29% Similarity=0.438 Sum_probs=245.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
||+|||||||||||++|++.|+++| ..|. +++..... ......+++++.+|+.| +++.+++ .++|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~v~-~~~~~~~~------~~~~~~~~~~~~~Dl~~-~~~~~~~--~~~d~vi 68 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN--EIVV-IDNLSSGN------EEFVNEAARLVKADLAA-DDIKDYL--KGAEEVW 68 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS--CEEE-ECCCSSCC------GGGSCTTEEEECCCTTT-SCCHHHH--TTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC--CEEE-EEcCCCCC------hhhcCCCcEEEECcCCh-HHHHHHh--cCCCEEE
Confidence 4689999999999999999999994 4444 44432111 11124578999999999 8888888 6999999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+......+.+++...+++|+.++.+++++|++.+ +++|||+||.++||.....+. .|+.+..|.++|+.+|..
T Consensus 69 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~---~E~~~~~~~~~Y~~sK~~ 144 (313)
T 3ehe_A 69 HIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPT---PEDYPTHPISLYGASKLA 144 (313)
T ss_dssp ECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSB---CTTSCCCCCSHHHHHHHH
T ss_pred ECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCC---CCCCCCCCCCHHHHHHHH
Confidence 9999877666778899999999999999999999987 889999999999998765443 677788899999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCC-CCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
+|.+++.+++++|++++++||++||||+... .++..++..+..+ ..+.+++++.+.++|+|++|+|++++.+++....
T Consensus 145 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 223 (313)
T 3ehe_A 145 CEALIESYCHTFDMQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER 223 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhcCCCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCC
Confidence 9999999999899999999999999998753 5666677666655 5667889999999999999999999999996667
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC---CCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN---RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
+++||+++++++|+.|+++.+++.+|.++.. .+.+. .+.......+|++|+++|||+|+++++++|+++++|+++
T Consensus 224 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~ 301 (313)
T 3ehe_A 224 VNIFNIGSEDQIKVKRIAEIVCEELGLSPRF--RFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301 (313)
T ss_dssp EEEEECCCSCCEEHHHHHHHHHHHTTCCCEE--EEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred CceEEECCCCCeeHHHHHHHHHHHhCCCCce--EECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 7899999999999999999999999987543 22221 122334567899999889999999999999999999997
Q ss_pred C
Q 005818 323 N 323 (676)
Q Consensus 323 ~ 323 (676)
+
T Consensus 302 ~ 302 (313)
T 3ehe_A 302 D 302 (313)
T ss_dssp H
T ss_pred C
Confidence 5
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-41 Score=347.30 Aligned_cols=314 Identities=26% Similarity=0.370 Sum_probs=256.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+++|+|||||||||||+++++.|+++ +++|++++|........... ......+++++.+|++|++++.+++...++|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 34679999999999999999999999 68899998864321100000 0001347899999999999999999666999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|||+|+........+++.+.++.|+.++.+++++|++.+ +++|||+||.++||.....+. +|+.+..|.++|+.+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~---~e~~~~~~~~~Y~~s 156 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPI---DETFPLSATNPYGQT 156 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSB---CTTSCCBCSSHHHHH
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCC---CCCCCCCCCChhHHH
Confidence 9999999877655566777899999999999999999987 889999999999988765443 777888899999999
Q ss_pred HHHHHHHHHHHHHHcC-CCEEEEeeCCccCCCCC----------CCChHHHHHHHHHCC-CCceeec------CCCceEe
Q 005818 164 KAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQF----------PEKLIPKFILLAMKG-KPLPIHG------DGSNVRS 225 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~-l~~~ilR~~~i~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~ 225 (676)
|..+|.+++.++.+++ ++++++||+++|||+.. ...+++.+.+..... ..+.+++ ++.+.++
T Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 157 KLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 9999999999988875 99999999999999541 234666655555433 5566667 7889999
Q ss_pred eeeHHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hC
Q 005818 226 YLYCEDVAEAFDTILHK---GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QL 301 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~---~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l 301 (676)
|+|++|+|++++.++++ ...+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|++ .|
T Consensus 237 ~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~l 314 (341)
T 3enk_A 237 YIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVP--YELVARRPGDVAECYANPAAAAETI 314 (341)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHHHHHHH
T ss_pred eEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcc--eeeCCCCCCCccccccCHHHHHHHc
Confidence 99999999999999876 346889999999999999999999999998654 3444555555667789999997 59
Q ss_pred CCcccCCHHHHHHHHHHHHhhCCCC
Q 005818 302 GWYERVTWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 302 g~~~~~~~~~~l~~~~~~~~~~~~~ 326 (676)
||+|+++++++|+++++||+++.+.
T Consensus 315 G~~p~~~l~~~l~~~~~~~~~~~~~ 339 (341)
T 3enk_A 315 GWKAERDLERMCADHWRWQENNPRG 339 (341)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999987644
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=341.95 Aligned_cols=301 Identities=26% Similarity=0.400 Sum_probs=252.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
.+++|||||||||||++|++.|+++ +++|++++|.... . . .+++++.+|++|++++.+++...++|+|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~--~-------l~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-K--L-------PNVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-C--C-------TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-c--c-------ceeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 4689999999999999999999999 6889999886532 1 1 1789999999999999999855569999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCC--CCCcCCCCCCCCCCCCCChhHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGET--DEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~--~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
||+|+......+.+++...+++|+.++.+++++|+..+.+++|||+||.++|+.. ...+ .+|+++..|.++|+.+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~---~~E~~~~~~~~~Y~~s 155 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESP---VSEENQLRPMSPYGVS 155 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCS---BCTTSCCBCCSHHHHH
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCC---CCCCCCCCCCCccHHH
Confidence 9999987755566788899999999999999999876337999999999999875 3332 3677788889999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHC---C--CCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMK---G--KPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
|..+|.+++.+++++|++++++||+++|||+.....+++.++..+.. + .++.+++++.+.++++|++|+|++++.
T Consensus 156 K~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 235 (321)
T 2pk3_A 156 KASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL 235 (321)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence 99999999999888899999999999999998665667777776665 6 567778888899999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHHh-CCCcccCCHHHHHHH
Q 005818 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQK 315 (676)
Q Consensus 239 ~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~ 315 (676)
+++++..+++||++++.++|+.|+++.+.+.+|.+.+ +...+ .++.......+|++|+++ |||+|+++++++|++
T Consensus 236 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~ 313 (321)
T 2pk3_A 236 LSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKID--TELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFE 313 (321)
T ss_dssp HHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCE--EEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred HHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCc--eeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHH
Confidence 9988766889999999999999999999999997543 22223 233334567889999986 899999999999999
Q ss_pred HHHHHhhC
Q 005818 316 TMKWYISN 323 (676)
Q Consensus 316 ~~~~~~~~ 323 (676)
+++||+++
T Consensus 314 ~~~~~~~~ 321 (321)
T 2pk3_A 314 ILQSYRQA 321 (321)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999753
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=348.90 Aligned_cols=305 Identities=24% Similarity=0.309 Sum_probs=250.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-----ccCC--CCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-----LKNL--NPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|++|+|||||||||||++|++.|++.+.+++|++++|...... .+.+ .......+++++.+|++|++++.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL- 86 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence 4568999999999999999999999333789999988653110 0000 0112234689999999999999988
Q ss_pred ccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCC
Q 005818 78 LTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 157 (676)
Q Consensus 78 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 157 (676)
...++|+|||+|+.... +..++...+++|+.++.+++++|++.+ ++ |||+||.++||.... +.+|+++..|.
T Consensus 87 ~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~----~~~E~~~~~p~ 158 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKA----PNVVGKNESPE 158 (362)
T ss_dssp TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCS----SBCTTSCCCCS
T ss_pred hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCC----CCCCCCCCCCC
Confidence 22789999999996553 567888999999999999999999987 55 999999999998765 23778888999
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
++|+.+|..+|.+++.++.+ ++++++||+++|||+..+. .+++.++..+..+.++.+++++.+.++|+|++|+|
T Consensus 159 ~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 236 (362)
T 3sxp_A 159 NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236 (362)
T ss_dssp SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHH
Confidence 99999999999999987765 9999999999999987543 67888999999998888888899999999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCC-CCCCcccccCHHHHH-hCCCcccCCHHH
Q 005818 234 EAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR-PFNDQRYFLDVQKLK-QLGWYERVTWEE 311 (676)
Q Consensus 234 ~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~-~lg~~~~~~~~~ 311 (676)
++++.+++++..+ +||+++++++|+.|+++.+++.+| +. .+...+.. +.......+|++|++ .|||+|++++++
T Consensus 237 ~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~--~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 312 (362)
T 3sxp_A 237 QANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DF--KVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLES 312 (362)
T ss_dssp HHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CC--EEECCC-------CCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CC--ceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHH
Confidence 9999999987666 999999999999999999999999 43 23333333 334456789999996 599999999999
Q ss_pred HHHHHHHHHhhCC
Q 005818 312 GLQKTMKWYISNP 324 (676)
Q Consensus 312 ~l~~~~~~~~~~~ 324 (676)
+|+++++|++++.
T Consensus 313 ~l~~~~~~~~~~~ 325 (362)
T 3sxp_A 313 GIKDYLPHIHAIF 325 (362)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999763
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=345.44 Aligned_cols=311 Identities=27% Similarity=0.390 Sum_probs=256.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc--cccCCCCCC---CCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--NLKNLNPSR---LSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~---~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|++|+|||||||||||++|++.|+++ +++|++++|..... ....+.... ...+++++.+|+.|.+++.+++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 100 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-- 100 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--
Confidence 45689999999999999999999999 68899988864211 000000000 0257899999999999999999
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCCh
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 159 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 159 (676)
.++|+|||+|+......+.+++...+++|+.++.+++++|++.+ +++|||+||.++|+.....+ .+|+++..|.++
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~---~~E~~~~~~~~~ 176 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLP---KVEDTIGKPLSP 176 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSS---BCTTCCCCCCSH
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCC---CCCCCCCCCCCh
Confidence 69999999999865444456778899999999999999999887 89999999999999875433 367778888999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|+.+|..+|.+++.++++++++++++||+.||||+..+. .+++.++..+..+.++.+++++.+.++|+|++|+|++
T Consensus 177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (352)
T 1sb8_A 177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 256 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 999999999999999888899999999999999987543 5677788888888888888999999999999999999
Q ss_pred HHHHHhc--CCCCceEEEcCCCcccHHHHHHHHHHHh---CCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCH
Q 005818 236 FDTILHK--GEVGHVYNIGTKKERRVIDVATDICKLF---SLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTW 309 (676)
Q Consensus 236 i~~~~~~--~~~~~~y~i~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~ 309 (676)
++.+++. ...+++||+++++++|+.|+++.+.+.+ |.+.+..+.+.+..+.......+|++|+++ |||+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 336 (352)
T 1sb8_A 257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDV 336 (352)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCH
T ss_pred HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCH
Confidence 9998876 2367899999999999999999999999 887653333333334344556789999975 999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005818 310 EEGLQKTMKWYISN 323 (676)
Q Consensus 310 ~~~l~~~~~~~~~~ 323 (676)
+++|+++++||+++
T Consensus 337 ~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 337 SAGVALAMPWYIMF 350 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999863
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=348.31 Aligned_cols=318 Identities=42% Similarity=0.730 Sum_probs=259.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|++++ +++|++++|.........+.......+++++.+|++|++++.+++...++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT-QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcC-CCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 479999999999999999999973 5789998886422222222211124579999999999999999985448999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCc-------eEEEEecccccCCCCCC-------cCCCCCCC
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIK-------RFIHVSTDEVYGETDED-------AVVGNHEA 151 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~-------~~v~~SS~~vyg~~~~~-------~~~~~~e~ 151 (676)
+|+......+.+++...+++|+.++.+++++|... + ++ +|||+||.++||..... .....+|+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~ 158 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence 99987654455677889999999999999999987 6 66 99999999999875421 00133677
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
.+..|.+.|+.+|..+|.+++.++++++++++++||+.||||+..+..+++.++..+..+..+++++++.+.++++|++|
T Consensus 159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 77788899999999999999999888899999999999999987666678888888888888888898999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc------ceeeecCCCCCCcccccCHHHHHh-CCCc
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDT------QIKFVENRPFNDQRYFLDVQKLKQ-LGWY 304 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~k~~~-lg~~ 304 (676)
+|++++.+++++..+++||++++.++|+.|+++.+++.+|.+.+. .+.+.+.++.....+.+|++|+++ |||+
T Consensus 239 va~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (361)
T 1kew_A 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCC
Confidence 999999999877778899999999999999999999998864321 123333333333456789999985 9999
Q ss_pred ccCCHHHHHHHHHHHHhhCCCCc
Q 005818 305 ERVTWEEGLQKTMKWYISNPDWW 327 (676)
Q Consensus 305 ~~~~~~~~l~~~~~~~~~~~~~~ 327 (676)
|+++++++|+++++|++++..|+
T Consensus 319 p~~~~~e~l~~~~~~~~~~~~~~ 341 (361)
T 1kew_A 319 PLETFESGIRKTVEWYLANTQWV 341 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHCHHHH
T ss_pred CccCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999875444
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=341.32 Aligned_cols=298 Identities=29% Similarity=0.440 Sum_probs=246.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++ +++|++++|...... .....+++++.+|+.|.+ +.+++ .+ |+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~------~~~~~~~~~~~~Dl~d~~-~~~~~--~~-d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRR------EFVNPSAELHVRDLKDYS-WGAGI--KG-DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCG------GGSCTTSEEECCCTTSTT-TTTTC--CC-SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCch------hhcCCCceEEECccccHH-HHhhc--CC-CEEEE
Confidence 58999999999999999999999 689999988653221 111457899999999998 77776 34 99999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+......+.+++...++.|+.++.+++++|++.+ +++|||+||.++||.....+. .|+.+..|.++|+.+|..+
T Consensus 69 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~---~e~~~~~p~~~Y~~sK~~~ 144 (312)
T 3ko8_A 69 FAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPT---PEEEPYKPISVYGAAKAAG 144 (312)
T ss_dssp CCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSB---CTTSCCCCCSHHHHHHHHH
T ss_pred CCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCC---CCCCCCCCCChHHHHHHHH
Confidence 999877667778889999999999999999999987 899999999999998765443 6778888999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCC-CCceeecCCCceEeeeeHHHHHHHHHHHHhc----
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAFDTILHK---- 242 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~---- 242 (676)
|.+++.++++++++++++||+++|||+... .++..++..+..+ ..+.+++++.+.++|+|++|+|++++.++++
T Consensus 145 e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 223 (312)
T 3ko8_A 145 EVMCATYARLFGVRCLAVRYANVVGPRLRH-GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM 223 (312)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCS-SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCEEEEeeccccCcCCCC-ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc
Confidence 999999998889999999999999998753 5666666666655 5566788899999999999999999999987
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC------CCCCCcccccCHHHHH-hCCCcccCCHHHHHHH
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN------RPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQK 315 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~ 315 (676)
...+++||+++++++|+.|+++.+.+.+|.+++. ...+. .+.......+|++|++ .|||+|+++++++|++
T Consensus 224 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~ 301 (312)
T 3ko8_A 224 DAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEI--RLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKK 301 (312)
T ss_dssp CCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEE--EEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHH
T ss_pred CCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCce--eecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHH
Confidence 3467899999999999999999999999987643 22221 2233455679999995 6999999999999999
Q ss_pred HHHHHhhCC
Q 005818 316 TMKWYISNP 324 (676)
Q Consensus 316 ~~~~~~~~~ 324 (676)
+++|++++.
T Consensus 302 ~~~~~~~~~ 310 (312)
T 3ko8_A 302 TAEDLAKEL 310 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999998753
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-41 Score=343.17 Aligned_cols=296 Identities=16% Similarity=0.275 Sum_probs=246.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+|++|+|||||||||||++|++.|+++|+ +.. . ....++.+.+|+.|++.+.+++...++|
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--------~~~--~---------~~~~~~~~~~D~~d~~~~~~~~~~~~~d 63 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG--------LPG--E---------DWVFVSSKDADLTDTAQTRALFEKVQPT 63 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC--------CTT--C---------EEEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC--------ccc--c---------cccccCceecccCCHHHHHHHHhhcCCC
Confidence 47789999999999999999999999964 110 0 0113444579999999999999766799
Q ss_pred EEEEccccCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC----CCCCCC
Q 005818 84 TIMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPTN 158 (676)
Q Consensus 84 ~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~ 158 (676)
+|||+|+.... ..+.+++...+++|+.++.+|+++|++.+ +++|||+||.++||.....+. +|++ +..|.+
T Consensus 64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~~~~~p~~ 139 (319)
T 4b8w_A 64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPI---DETMIHNGPPHNSN 139 (319)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSB---CGGGGGBSCCCSSS
T ss_pred EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCc---cccccccCCCCCCc
Confidence 99999998652 23556788899999999999999999987 899999999999998765443 5554 566666
Q ss_pred -hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHH----HHCCCCceeecCCCceEeeeeH
Q 005818 159 -PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILL----AMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 159 -~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+|+.+|..+|++++.++++++++++++||+++|||+..+ ..+++.++.. +..+.++.+++++.+.++|+|+
T Consensus 140 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 219 (319)
T 4b8w_A 140 FGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYS 219 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEH
T ss_pred chHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeH
Confidence 599999999999999998889999999999999998743 2466666666 7888889999999999999999
Q ss_pred HHHHHHHHHHHhcCC--CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCccc
Q 005818 230 EDVAEAFDTILHKGE--VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYER 306 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~--~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~ 306 (676)
+|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|.+|+++ |||.|.
T Consensus 220 ~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 297 (319)
T 4b8w_A 220 LDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGE--VTFDTTKSDGQFKKTASNSKLRTYLPDFRF 297 (319)
T ss_dssp HHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSC--EEEETTSCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCc--EEeCCCCCcCcccccCCHHHHHHhcCCCCC
Confidence 999999999998743 3669999999999999999999999998654 44445555455567899999986 999999
Q ss_pred CCHHHHHHHHHHHHhhCC
Q 005818 307 VTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 307 ~~~~~~l~~~~~~~~~~~ 324 (676)
++++++|+++++||+++.
T Consensus 298 ~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 298 TPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp CCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=337.82 Aligned_cols=300 Identities=31% Similarity=0.502 Sum_probs=249.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||+++++.|+++ +++|++++|..... ...+ ..+++++.+|++|++++.+++...++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~-~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGK-RENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCC-GGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCc-hhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999 68898888743211 1111 2467889999999999999885448999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecc-cccCC-CCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTD-EVYGE-TDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~-~vyg~-~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
+|+......+.+++...+++|+.++.+++++|++.+ +++|||+||. ++||. ....+ .+|+++..|.++|+.+|.
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~---~~E~~~~~~~~~Y~~sK~ 148 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGER---AEETWPPRPKSPYAASKA 148 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCC---BCTTSCCCCCSHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCC---cCCCCCCCCCChHHHHHH
Confidence 999866544556778899999999999999999877 8899999998 99986 33222 366777788899999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCCceee-----cCCCceEeeeeHHHHHHHHH
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKPLPIH-----GDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~v~D~a~ai~ 237 (676)
.+|.+++.++++++++++++||+++|||+.... .+++.+++.+..+.++.++ +++.+.++|+|++|+|++++
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 228 (311)
T 2p5y_A 149 AFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHA 228 (311)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHH
Confidence 999999999888899999999999999986442 3567777777778877777 88889999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHH
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTM 317 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~ 317 (676)
.+++++ +++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++|||+|+++++++|++++
T Consensus 229 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~ 304 (311)
T 2p5y_A 229 LALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTV 304 (311)
T ss_dssp HHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHH
T ss_pred HHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHH
Confidence 999875 789999999999999999999999998654 3333444444456788999998899999999999999999
Q ss_pred HHHhhC
Q 005818 318 KWYISN 323 (676)
Q Consensus 318 ~~~~~~ 323 (676)
+|++++
T Consensus 305 ~~~~~~ 310 (311)
T 2p5y_A 305 DHFRGA 310 (311)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 999863
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=354.25 Aligned_cols=312 Identities=21% Similarity=0.367 Sum_probs=253.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCC-CHHHHHHHHccCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA-SADLVHFILLTEKI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~~~~~~~~~~~ 82 (676)
.|++|+|||||||||||++|++.|++++ +++|++++|...... . .....+++++.+|+. |.+.+.+++ .++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~--~---~~~~~~v~~~~~Dl~~d~~~~~~~~--~~~ 92 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDMQTDRLG--D---LVKHERMHFFEGDITINKEWVEYHV--KKC 92 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEESCCTTTG--G---GGGSTTEEEEECCTTTCHHHHHHHH--HHC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeCChhhhh--h---hccCCCeEEEeCccCCCHHHHHHHh--ccC
Confidence 3667899999999999999999999983 578999988652211 1 111358999999999 999999998 589
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC-------C
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL-------L 155 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~ 155 (676)
|+|||+|+......+..++...++.|+.++.+|+++|++.+ ++|||+||.++||.....+. .|++.. .
T Consensus 93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~---~e~~~~~~~~p~~~ 167 (372)
T 3slg_A 93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQF---DPDASALTYGPINK 167 (372)
T ss_dssp SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSB---CTTTCCEEECCTTC
T ss_pred CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCC---CccccccccCCCCC
Confidence 99999999887655566788899999999999999999987 89999999999998765443 333322 4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--------CChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
|.++|+.+|..+|++++.++++ +++++++||++||||+..+ ..++..++..+..+.++.+++++.+.++|+
T Consensus 168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 246 (372)
T 3slg_A 168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT 246 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence 6678999999999999999887 9999999999999998642 347888899999999999999899999999
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC-CcccHHHHHHHHHHHhCCCCCcce-----eeecC--------CCCCCcc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTK-KERRVIDVATDICKLFSLNPDTQI-----KFVEN--------RPFNDQR 290 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~~~~~-----~~~~~--------~~~~~~~ 290 (676)
|++|+|++++.+++++ ..+++||++++ +++|+.|+++.+++.+|.+++... ...+. .......
T Consensus 247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (372)
T 3slg_A 247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQN 326 (372)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CC
T ss_pred EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccce
Confidence 9999999999999876 36889999994 899999999999999987654211 11110 0012345
Q ss_pred cccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhCCCCccc
Q 005818 291 YFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWGD 329 (676)
Q Consensus 291 ~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 329 (676)
..+|.+|+++ |||+|+++++++|+++++||+++...++.
T Consensus 327 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~ 366 (372)
T 3slg_A 327 RVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADARA 366 (372)
T ss_dssp CCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHHHHH
T ss_pred eecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999985 99999999999999999999987544443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=339.21 Aligned_cols=306 Identities=28% Similarity=0.442 Sum_probs=249.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
||+|||||||||||++|++.|+++ +++|++++|...... .. ...+++++.+|+.|++++.+++...++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHE-DA-----ITEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GG-----SCTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCch-hh-----cCCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 468999999999999999999999 688888888643211 11 1237899999999999999998545899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+......+.+++...++.|+.++.+|+++|++.+ +++|||+||.++|+.....+ .+|+++..|.++|+.+|..
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~---~~E~~~~~~~~~Y~~sK~~ 148 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDL---ITEETMTNPTNTYGETKLA 148 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSS---BCTTSCCCCSSHHHHHHHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCC---CCcCCCCCCCChHHHHHHH
Confidence 9999876443445777899999999999999999877 89999999999998765433 3677788889999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCC---------CCChHHHHHHHHHC-CCCceeec------CCCceEeeeeHH
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMK-GKPLPIHG------DGSNVRSYLYCE 230 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~---------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~v~v~ 230 (676)
+|.+++.++++++++++++||+++||++.. ...+++.+.+.+.. +..+.+++ ++.+.++|+|++
T Consensus 149 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 149 IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp HHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred HHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 999999998888999999999999999631 23566666665543 34566666 678899999999
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCccc
Q 005818 231 DVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYER 306 (676)
Q Consensus 231 D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~ 306 (676)
|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|++ .|||+|+
T Consensus 229 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 306 (330)
T 2c20_A 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP--AEVAPRRAGDPARLVASSQKAKEKLGWDPR 306 (330)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC--EEEECCCSSCCSEECBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCCcccccccCHHHHHHHhCCCCc
Confidence 99999999997642 3689999999999999999999999998654 3333333334456788999997 4999999
Q ss_pred C-CHHHHHHHHHHHHhhCCCC
Q 005818 307 V-TWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 307 ~-~~~~~l~~~~~~~~~~~~~ 326 (676)
+ +++++|+++++|++++..+
T Consensus 307 ~~~l~~~l~~~~~~~~~~~~~ 327 (330)
T 2c20_A 307 YVNVKTIIEHAWNWHQKQPNG 327 (330)
T ss_dssp CCCHHHHHHHHHHHHHHCSSC
T ss_pred cCCHHHHHHHHHHHHHHhhhc
Confidence 8 9999999999999987644
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=344.50 Aligned_cols=301 Identities=28% Similarity=0.434 Sum_probs=248.6
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc--cccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--NLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...+++|+|||||||||||++|++.|+++ +++|++++|..... ....+.......+++++.+|+.
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------- 68 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------- 68 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------
Confidence 555556789999999999999999999999 67888888865311 1111111111234555666654
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
++|+|||+|+.........++...++ |+.++.+++++|++.+ +++|||+||.++|+.....+. .|+++..|.+
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~---~E~~~~~p~~ 141 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPT---PEDSPLSPRS 141 (321)
T ss_dssp --TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSB---CTTSCCCCCS
T ss_pred --cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCC---CCCCCCCCCC
Confidence 78999999998876555566666777 9999999999999988 899999999999998765443 7788888999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCC-CEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGL-PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~ 237 (676)
.|+.+|..+|.+++.+++++++ +++++||+.+|||+.....+++.++..+..+.++.+++++.+.++|+|++|+|++++
T Consensus 142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~ 221 (321)
T 3vps_A 142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLV 221 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHH
Confidence 9999999999999999988899 999999999999998777788999999998988899999999999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcc-cCCHHHHHHH
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYE-RVTWEEGLQK 315 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~-~~~~~~~l~~ 315 (676)
.+++++..+ +||+++++++|+.|+++.+. .+|.+.+ +...+..+.......+|.+|+++ |||+| +++++++|++
T Consensus 222 ~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~ 297 (321)
T 3vps_A 222 ALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAE--VARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRL 297 (321)
T ss_dssp HGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCE--EEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHH
T ss_pred HHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCc--cccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHH
Confidence 999988776 99999999999999999999 9987653 44445555566678899999986 99999 8899999999
Q ss_pred HHHHHhhCC
Q 005818 316 TMKWYISNP 324 (676)
Q Consensus 316 ~~~~~~~~~ 324 (676)
+++||+++.
T Consensus 298 ~~~~~~~~~ 306 (321)
T 3vps_A 298 TLEWWQSRD 306 (321)
T ss_dssp HHHHHHTSC
T ss_pred HHHHHHhCC
Confidence 999999864
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=338.29 Aligned_cols=312 Identities=20% Similarity=0.252 Sum_probs=250.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.++|+|||||||||||++|++.|+++ +++|++++|.........+.......+++++.+|+.|++++.+++...++|+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 45689999999999999999999999 6889999886532110000000123468999999999999999986557899
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI-KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
|||+|+......+..++...+++|+.++.+++++|++.+ + ++|||+||.++|+.....+ .+|+++..|.++|+.+
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~~s 165 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAER---QDENTPFYPRSPYGVA 165 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHH
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCC---CCcccCCCCCChhHHH
Confidence 999999876554567788899999999999999999886 5 8999999999999876433 3677888899999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC---hHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
|..+|.+++.++++++++++++||+.+|||+..... .+..++..+..+.. ...++++.+.++|+|++|+|++++.+
T Consensus 166 K~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 245 (335)
T 1rpn_A 166 KLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 245 (335)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHH
Confidence 999999999998888999999999999999864322 24556666667764 34568889999999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHH
Q 005818 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKT 316 (676)
Q Consensus 240 ~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~ 316 (676)
++++. +++||+++++++|+.|+++.+.+.+|.+.+..+.+.+ .++.......+|++|+++ |||+|+++++++|+++
T Consensus 246 ~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 324 (335)
T 1rpn_A 246 LQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMM 324 (335)
T ss_dssp HHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHH
Confidence 98765 4799999999999999999999999986432233222 233334456789999985 9999999999999999
Q ss_pred HHHHhhC
Q 005818 317 MKWYISN 323 (676)
Q Consensus 317 ~~~~~~~ 323 (676)
++|++++
T Consensus 325 ~~~~~~~ 331 (335)
T 1rpn_A 325 VEADLRR 331 (335)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=344.87 Aligned_cols=305 Identities=28% Similarity=0.476 Sum_probs=246.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCC-cEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPE-YKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+++|+|||||||||||++|++.|+++ + ++|++++|...... ..+. ...+++++.+|+.|++.+.+++ .++|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~-~~l~---~~~~v~~~~~Dl~d~~~l~~~~--~~~d 101 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEK-INVP---DHPAVRFSETSITDDALLASLQ--DEYD 101 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCG-GGSC---CCTTEEEECSCTTCHHHHHHCC--SCCS
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCch-hhcc---CCCceEEEECCCCCHHHHHHHh--hCCC
Confidence 34679999999999999999999999 6 89999988653211 1111 2457999999999999999888 6999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCC--CCC---CC-CC
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNH--EAS---QL-LP 156 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~--e~~---~~-~p 156 (676)
+|||+|+......+..++...+++|+.++.+|+++|++. + +++|||+||.++||.....+. . |+. +. .|
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~---~~~E~~~~~~~~~~ 177 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDA---KATEETDIVSLHNN 177 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC-----------------CCCCCCCSSCC
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCc---CcccccccccccCC
Confidence 999999987654445577889999999999999999987 6 899999999999997654332 4 555 55 78
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC---------CC----CChHHHHHHHHHCCCCceeecCCCce
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ---------FP----EKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
.++|+.+|..+|.+++.++++++++++++||+.|||++. .+ ..+++.++..+..+.++.+++++.+.
T Consensus 178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~ 257 (377)
T 2q1s_A 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT 257 (377)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence 889999999999999999888899999999999999987 33 46788888888889888888888899
Q ss_pred EeeeeHHHHHHH-HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCc-ccccCHHHHH-h
Q 005818 224 RSYLYCEDVAEA-FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQ-RYFLDVQKLK-Q 300 (676)
Q Consensus 224 ~~~v~v~D~a~a-i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~k~~-~ 300 (676)
++|+|++|+|++ ++.+++++..+ +||+++++++|+.|+++.+.+.+|.+.+. ...+.++.... ...+|++|++ .
T Consensus 258 ~~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~p~~~~~~~~~~~~d~~k~~~~ 334 (377)
T 2q1s_A 258 RDFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTEL--DRLPKRPWDNSGKRFGSPEKARRE 334 (377)
T ss_dssp ECCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCC--CCCCCCGGGCC-CCCCCCHHHHHH
T ss_pred EeeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCc--eeCCCCccccccccccCHHHHHHH
Confidence 999999999999 99999876655 99999999999999999999999986542 22222232334 6778999997 5
Q ss_pred CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 301 LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 301 lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|||+|+++++++|+++++|++++.
T Consensus 335 lG~~p~~~l~e~l~~~~~~~~~~~ 358 (377)
T 2q1s_A 335 LGFSADVSIDDGLRKTIEWTKANL 358 (377)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHTH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999998753
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=335.62 Aligned_cols=310 Identities=25% Similarity=0.385 Sum_probs=248.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc------c--cccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC------S--NLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~------~--~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
+|+|||||||||||++|++.|+++ +++|++++|.... . ..+.+. .....+++++.+|++|++++.+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELTGRSVEFEEMDILDQGALQRLFK 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHH-HHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHH-hccCCceEEEECCCCCHHHHHHHHH
Confidence 579999999999999999999999 5778888775321 0 000000 0013468999999999999999985
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-C
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-T 157 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~ 157 (676)
..++|+|||+|+......+.+++...+++|+.++.+++++|++.+ +++|||+||.++|+.....+ .+|+++..| .
T Consensus 79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~---~~E~~~~~p~~ 154 (348)
T 1ek6_A 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLP---LDEAHPTGGCT 154 (348)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCS
T ss_pred hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCC---cCCCCCCCCCC
Confidence 458999999999876443456777899999999999999999877 89999999999998765433 367777777 7
Q ss_pred ChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCC------C----CCChHHHHHHHHH-CCCCceeec------
Q 005818 158 NPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQ------F----PEKLIPKFILLAM-KGKPLPIHG------ 218 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------ 218 (676)
++|+.+|..+|.+++.++++ + ++++++||+++|||+. . ...+++.+...+. .+..+.+++
T Consensus 155 ~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (348)
T 1ek6_A 155 NPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence 89999999999999998877 5 9999999999999842 1 2457777777777 667777776
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC--CCC-ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCH
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG--EVG-HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV 295 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~--~~~-~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (676)
++.+.++|+|++|+|++++.+++++ ..+ ++||+++++++|+.|+++.+++.+|.+.+ +...+..+.......+|+
T Consensus 234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~ 311 (348)
T 1ek6_A 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANP 311 (348)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCC
T ss_pred CCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCccchhhccCH
Confidence 5788999999999999999999764 344 79999999999999999999999997654 333343343445677899
Q ss_pred HHHH-hCCCcccCCHHHHHHHHHHHHhhCCCC
Q 005818 296 QKLK-QLGWYERVTWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 296 ~k~~-~lg~~~~~~~~~~l~~~~~~~~~~~~~ 326 (676)
+|++ .|||+|+++++++|+++++|++++..+
T Consensus 312 ~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~~ 343 (348)
T 1ek6_A 312 SLAQEELGWTAALGLDRMCEDLWRWQKQNPSG 343 (348)
T ss_dssp HHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcccc
Confidence 9997 499999999999999999999987543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=341.10 Aligned_cols=294 Identities=21% Similarity=0.260 Sum_probs=248.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.++|+|||||||||||++|++.|+++ +++|++++|.... .+++++.+|+.|.+.+.+++ .++|+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~--~~~d~ 80 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI--MGVSA 80 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH--TTCSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH--hCCCE
Confidence 34689999999999999999999999 6788888886421 47889999999999999999 69999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+...... .+....+++|+.++.+++++|++.+ +++|||+||.+|||..... ..+..|+++..|.++|+.+|
T Consensus 81 vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~-~~~~~E~~~~~~~~~Y~~sK 156 (347)
T 4id9_A 81 VLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPE-FLPVTEDHPLCPNSPYGLTK 156 (347)
T ss_dssp EEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCS-SSSBCTTSCCCCCSHHHHHH
T ss_pred EEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCC-CCCcCCCCCCCCCChHHHHH
Confidence 999999876432 3447899999999999999999987 8999999999999984221 12347788888999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCcc-------------CCCCCC-----------CChHHHHHHHHHCCCCceeecCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVY-------------GPNQFP-----------EKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~-------------G~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
..+|++++.++++++++++++||+++| ||+... ..++..++..+..+.++.+++++
T Consensus 157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (347)
T 4id9_A 157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN 236 (347)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence 999999999999899999999999999 876432 35777888888899888888989
Q ss_pred CceEee----eeHHHHHHHHHHHHhcC-CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCH
Q 005818 221 SNVRSY----LYCEDVAEAFDTILHKG-EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV 295 (676)
Q Consensus 221 ~~~~~~----v~v~D~a~ai~~~~~~~-~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (676)
.+.++| +|++|+|++++.+++++ ..+++||+++++++|+.|+++.+++.+|.+.+ +...+..+ ....+|+
T Consensus 237 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~---~~~~~d~ 311 (347)
T 4id9_A 237 ENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV--TVDFPGDG---VYYHTSN 311 (347)
T ss_dssp TTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE--EEECSSCC---CBCCBCC
T ss_pred CcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc--eeeCCCcc---cccccCH
Confidence 899999 99999999999999887 56889999999999999999999999998543 22223222 2677899
Q ss_pred HHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 296 QKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 296 ~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
+|+++ |||+|+++++++|+++++|++++
T Consensus 312 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 340 (347)
T 4id9_A 312 ERIRNTLGFEAEWTMDRMLEEAATARRQR 340 (347)
T ss_dssp HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 99985 99999999999999999999875
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=334.48 Aligned_cols=292 Identities=23% Similarity=0.412 Sum_probs=241.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+|||||||||||++|++.|+++ +++|++++|.. .+|+.|.+++.+++...++|+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCE
Confidence 45679999999999999999999999 67888877641 279999999999984448999
Q ss_pred EEEccccCCc-CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC----CCCCC-C
Q 005818 85 IMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPT-N 158 (676)
Q Consensus 85 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~-~ 158 (676)
|||+|+.... .....++...++.|+.++.+++++|++.+ +++|||+||.++|+.....+. +|++ +..|. +
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~~~~~p~~~ 134 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPM---AESELLQGTLEPTNE 134 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSB---CGGGTTSSCCCGGGH
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCc---CccccccCCCCCCCC
Confidence 9999997642 12345677899999999999999999987 889999999999997654333 4544 44554 5
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHHHHC----C-CCceeecCCCceEeeeeH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMK----G-KPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~v~v 229 (676)
+|+.+|..+|.+++.++++++++++++||+.||||+..+ ..+++.++..+.. | .++.+++++.+.++|+|+
T Consensus 135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v 214 (321)
T 1e6u_A 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 214 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH
Confidence 899999999999999988889999999999999998753 2577777777654 3 567778889999999999
Q ss_pred HHHHHHHHHHHhcCCC---------CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh
Q 005818 230 EDVAEAFDTILHKGEV---------GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ 300 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~~---------~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 300 (676)
+|+|++++.+++++.. +++||+++++++|+.|+++.+.+.+|.+.+ +.+.+..+.......+|.+|+++
T Consensus 215 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~ 292 (321)
T 1e6u_A 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPDGTPRKLLDVTRLHQ 292 (321)
T ss_dssp HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEETTSCCCCSBCCBCCHHHHH
T ss_pred HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCc--eEeCCCCCCCcccccCCHHHHHh
Confidence 9999999999987653 589999999999999999999999997643 33444444445567899999988
Q ss_pred CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 301 LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 301 lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|||+|+++++++|+++++|++++.
T Consensus 293 lG~~p~~~~~~~l~~~~~~~~~~~ 316 (321)
T 1e6u_A 293 LGWYHEISLEAGLASTYQWFLENQ 316 (321)
T ss_dssp TTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred cCCccCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999998764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=337.54 Aligned_cols=310 Identities=26% Similarity=0.430 Sum_probs=247.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
||+|||||||||||++|++.|+++ +++|++++|...... ...+. ...+++++.+|++|++++.+++...++|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPD 75 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhc---cCCceEEEEcCCCCHHHHHHHHhccCCC
Confidence 368999999999999999999998 688988887431111 01111 1236899999999999999998544599
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEecccccCCCCCCcC-------------CCCC
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RFIHVSTDEVYGETDEDAV-------------VGNH 149 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~SS~~vyg~~~~~~~-------------~~~~ 149 (676)
+|||+|+......+.+++...+++|+.++.+++++|++.+ ++ +|||+||.++|+.....+. ....
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~ 154 (347)
T 1orr_A 76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 154 (347)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcc
Confidence 9999999876544456778899999999999999999987 65 9999999999987543221 1135
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC---CChHHHHHHHHHCCC-----CceeecCCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMKGK-----PLPIHGDGS 221 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~ 221 (676)
|+.+..|.+.|+.+|..+|.+++.+++++|++++++||+.|||++... ..+++.++..+..+. ++.+++++.
T Consensus 155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 234 (347)
T 1orr_A 155 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK 234 (347)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence 566677888999999999999999988889999999999999998643 235666666665554 677788999
Q ss_pred ceEeeeeHHHHHHHHHHHHhc--CCCCceEEEcCCC--cccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHH
Q 005818 222 NVRSYLYCEDVAEAFDTILHK--GEVGHVYNIGTKK--ERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~--~~~~~~y~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 297 (676)
+.++|+|++|+|++++.++++ ...+++||++++. ++|+.|+++.+.+.+|.+.+ +...+.++.......+|++|
T Consensus 235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k 312 (347)
T 1orr_A 235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKK 312 (347)
T ss_dssp CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHH
T ss_pred ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCCCCcceeecCHHH
Confidence 999999999999999999975 2357799999987 49999999999999998654 33334444444567789999
Q ss_pred HH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005818 298 LK-QLGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 298 ~~-~lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
++ .|||+|+++++++|+++++|++++.
T Consensus 313 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 340 (347)
T 1orr_A 313 ITNAIDWSPKVSAKDGVQKMYDWTSSIL 340 (347)
T ss_dssp HHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred HHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence 97 5999999999999999999999863
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=324.80 Aligned_cols=278 Identities=21% Similarity=0.278 Sum_probs=238.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++ +++|++++|. ++|+.|.+.+.+++...++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE--EYDIYPFDKK---------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTT---------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCEEEEeccc---------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 48999999999999999999999 7899999882 289999999999996558999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+......+.+++...++.|+.++.+++++|++.+ + +|||+||.++|+.....+. +|+++..|.++|+.+|..+
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~---~E~~~~~p~~~Y~~sK~~~ 137 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGY---DEFHNPAPINIYGASKYAG 137 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCB---CTTSCCCCCSHHHHHHHHH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCC---CCCCCCCCCCHHHHHHHHH
Confidence 999988766667888999999999999999999988 5 7999999999988765443 7888889999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCc
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~ 247 (676)
|++++.++ .+++++||+.+|||+. ..++..++..+..+.++.+.++ +.++++|++|+|++++.+++++. ++
T Consensus 138 E~~~~~~~----~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~-~~ 208 (287)
T 3sc6_A 138 EQFVKELH----NKYFIVRTSWLYGKYG--NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL-YG 208 (287)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSS--CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC-CE
T ss_pred HHHHHHhC----CCcEEEeeeeecCCCC--CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC-CC
Confidence 99998754 4789999999999976 4688888888888888877654 78899999999999999999877 78
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceeee---cCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFV---ENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
+||+++++++|+.|+++.+++.+|.+........ +..........+|.+|+++|||+|+++++++|+++++|+++
T Consensus 209 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 209 TYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred eEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 9999999999999999999999998653221111 12222334567899999999999999999999999999875
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=335.72 Aligned_cols=315 Identities=24% Similarity=0.351 Sum_probs=246.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHH-HcCCCcEEEEEcCCCcccc-------ccCC-------CCCCCCCC---eEEEEecCC
Q 005818 7 PKNILITGAAGFIASHVCNRLI-GNYPEYKIVVLDKLDYCSN-------LKNL-------NPSRLSPN---FKFIKGDVA 68 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~-~~g~~~~v~~~~r~~~~~~-------~~~~-------~~~~~~~~---v~~v~~Dl~ 68 (676)
+|+|||||||||||++|++.|+ ++ +++|++++|...... ...+ .......+ ++++.+|+.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 3589999999999999999999 88 688888888643210 0000 00000124 899999999
Q ss_pred CHHHHHHHHccCC-CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC----
Q 005818 69 SADLVHFILLTEK-IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED---- 143 (676)
Q Consensus 69 d~~~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~---- 143 (676)
|++.+.+++...+ +|+|||+|+......+.+++...+++|+.++.+|+++|++.+ +++|||+||.++|+.....
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~ 158 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVST 158 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccc
Confidence 9999999985546 999999999876543456778899999999999999999877 8999999999999876510
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC---------CCChHHHHH----HHHHC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF---------PEKLIPKFI----LLAMK 210 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~---------~~~~~~~~~----~~~~~ 210 (676)
...+.+|+++..|.++|+.+|..+|.+++.++.+++++++++||++||||+.. ...+++.++ ..+..
T Consensus 159 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 01233677778888999999999999999998888999999999999999631 245666655 23334
Q ss_pred CC------------Cceeec------CCCceEeeeeHHHHHHHHHHHHhcCC-C-----C---ceEEEcCCCcccHHHHH
Q 005818 211 GK------------PLPIHG------DGSNVRSYLYCEDVAEAFDTILHKGE-V-----G---HVYNIGTKKERRVIDVA 263 (676)
Q Consensus 211 ~~------------~~~~~~------~~~~~~~~v~v~D~a~ai~~~~~~~~-~-----~---~~y~i~~~~~~s~~el~ 263 (676)
+. .+.+++ ++.+.++|+|++|+|++++.+++++. . + ++||+++++++|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 43 466666 67889999999999999999987632 2 3 79999999999999999
Q ss_pred HHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCcccC-CHHHHHHHHHHHHhhCCCC
Q 005818 264 TDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERV-TWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 264 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~-~~~~~l~~~~~~~~~~~~~ 326 (676)
+.+.+.+|.+.+ +...+..+.......+|++|++ .|||+|++ +++++|+++++|++++...
T Consensus 319 ~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~~ 381 (397)
T 1gy8_A 319 EVARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNG 381 (397)
T ss_dssp HHHHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHhCCCCC--eeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcccc
Confidence 999999998654 3333333434456788999997 59999999 9999999999999987543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=326.65 Aligned_cols=302 Identities=29% Similarity=0.470 Sum_probs=243.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
.+++|+|||||||||||++|++.|+++ +++|++++|...... ..+.......+++++.+|+.|.. + .++|
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~d 93 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRK-RNVEHWIGHENFELINHDVVEPL-----Y--IEVD 93 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GGTGGGTTCTTEEEEECCTTSCC-----C--CCCS
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccch-hhhhhhccCCceEEEeCccCChh-----h--cCCC
Confidence 356789999999999999999999999 688888888642211 11111112357899999998853 3 6899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC-----CCCCCCC
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA-----SQLLPTN 158 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~ 158 (676)
+|||+|+.........++...++.|+.++.+++++|++.+ + +|||+||.++||.....+. +|+ .+..|.+
T Consensus 94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~---~E~~~~~~~~~~~~~ 168 (343)
T 2b69_A 94 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQ---SEDYWGHVNPIGPRA 168 (343)
T ss_dssp EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSB---CTTCCCBCCSSSTTH
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCC---cccccccCCCCCCCC
Confidence 9999999876544456778899999999999999999987 4 9999999999987654332 333 4556778
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
.|+.+|..+|.+++.++++++++++++||+.+|||+..+ ..++..++..+..+..+.+++++.+.++|+|++|+|+++
T Consensus 169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 248 (343)
T 2b69_A 169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence 899999999999999988889999999999999998643 357778888888888888889899999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHH
Q 005818 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQK 315 (676)
Q Consensus 237 ~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~ 315 (676)
+.+++.+. +++||+++++++|+.|+++.+.+.+|.+.+ +...+..........+|.+|+++ |||+|+++++++|++
T Consensus 249 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~ 325 (343)
T 2b69_A 249 VALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNK 325 (343)
T ss_dssp HHHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred HHHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCC--ceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHH
Confidence 99998654 679999999999999999999999998654 33333333333456789999975 999999999999999
Q ss_pred HHHHHhhC
Q 005818 316 TMKWYISN 323 (676)
Q Consensus 316 ~~~~~~~~ 323 (676)
+++|++++
T Consensus 326 ~~~~~~~~ 333 (343)
T 2b69_A 326 AIHYFRKE 333 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=332.52 Aligned_cols=312 Identities=21% Similarity=0.335 Sum_probs=248.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+|||||||||||++|++.|+++ +++|++++|........ ........+++++.+|+.|++++.+++...++|+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSL-FETARVADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCH-HHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchh-hHhhccCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 56789999999999999999999999 67899998864321100 0000113578999999999999999985446999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+......+.+++...+++|+.++.+++++|+..+.+++|||+||.++||..... .+..|+++..|.++|+.+|
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~E~~~~~~~~~Y~~sK 161 (357)
T 1rkx_A 84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI--WGYRENEAMGGYDPYSNSK 161 (357)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS--SCBCTTSCBCCSSHHHHHH
T ss_pred EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC--CCCCCCCCCCCCCccHHHH
Confidence 99999975544455677889999999999999999987657899999999999976532 1235666777889999999
Q ss_pred HHHHHHHHHHHHHc---------CCCEEEEeeCCccCCCCCC-CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 165 AGAEMLVMAYGRSY---------GLPVITTRGNNVYGPNQFP-EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 165 ~~~E~~~~~~~~~~---------~l~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
..+|.+++.++.++ +++++++||+.||||+... ..+++.+++.+..+..+.+ +++.+.++|+|++|+++
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~ 240 (357)
T 1rkx_A 162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLS 240 (357)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHH
Confidence 99999999988754 9999999999999998743 3688888888888887665 45678899999999999
Q ss_pred HHHHHHhc-----CCCCceEEEcCC--CcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCccc
Q 005818 235 AFDTILHK-----GEVGHVYNIGTK--KERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYER 306 (676)
Q Consensus 235 ai~~~~~~-----~~~~~~y~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~ 306 (676)
+++.++++ ...+++||++++ +++|+.|+++.+.+.+|.+.+...... ..+.......+|++|+++ |||+|+
T Consensus 241 a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~ 319 (357)
T 1rkx_A 241 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN-AHPHEAHYLKLDCSKAKMQLGWHPR 319 (357)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHHHHHCCCCC
T ss_pred HHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCC-CCCcCcccccCCHHHHHHHhCCCcC
Confidence 99998874 245789999974 589999999999999998654322111 123334556799999985 999999
Q ss_pred CCHHHHHHHHHHHHhhC
Q 005818 307 VTWEEGLQKTMKWYISN 323 (676)
Q Consensus 307 ~~~~~~l~~~~~~~~~~ 323 (676)
++++++|+++++||+++
T Consensus 320 ~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 320 WNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 99999999999999864
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=330.40 Aligned_cols=303 Identities=23% Similarity=0.288 Sum_probs=248.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+||+|||||||||||++|++.|+++ +++|++++|...... .....+++++.+|+.|++++.+++ .++|+|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~V 97 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT--EGVDHV 97 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccch------hhccCCceEEECCCCCHHHHHHHh--CCCCEE
Confidence 4679999999999999999999999 688999988643211 111347899999999999999999 699999
Q ss_pred EEccccCCcCC-cCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcC--CCCCCCC--CCCCCChh
Q 005818 86 MHFAAQTHVDN-SFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAV--VGNHEAS--QLLPTNPY 160 (676)
Q Consensus 86 ih~a~~~~~~~-~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~--~~~~e~~--~~~p~~~Y 160 (676)
||+|+...... +..++...+++|+.++.+++++|++.+ +++|||+||.++|+....... ....|++ +..|.+.|
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y 176 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence 99999765321 246778899999999999999999877 889999999999987543211 1124444 56678899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~a 235 (676)
+.+|..+|.+++.++++++++++++||+.+|||+.... .++..++..+..+.+ +.+++++.+.++|+|++|+|++
T Consensus 177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence 99999999999999888899999999999999976432 367778887777765 7788888999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQ 314 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~ 314 (676)
++.+++++ .+++||+++++++|+.|+++.+.+.+|.+.+. ...+.. .......+|++|+++ |||+|+++++++|+
T Consensus 257 i~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~--~~~p~~-~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~ 332 (379)
T 2c5a_A 257 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI--HHIPGP-EGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 332 (379)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCE--EEECCC-CCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCce--eeCCCC-CCcccccCCHHHHHHHhCCCCCCCHHHHHH
Confidence 99999876 57799999999999999999999999976542 222221 123445789999985 99999999999999
Q ss_pred HHHHHHhhC
Q 005818 315 KTMKWYISN 323 (676)
Q Consensus 315 ~~~~~~~~~ 323 (676)
++++|++++
T Consensus 333 ~~~~~~~~~ 341 (379)
T 2c5a_A 333 ITYFWIKEQ 341 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=323.01 Aligned_cols=308 Identities=28% Similarity=0.456 Sum_probs=241.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|||||||||||+++++.|+++ +++|++++|...... ...+. .....+++++.+|++|++++.+++...++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHH-hhcCCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence 48999999999999999999999 678888876432110 00000 00124678999999999999998865579999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CChhHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATK 164 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~sK 164 (676)
||+|+........+++...++.|+.++.+++++|++.+ +++|||+||.++|+.....+ .+|+.+..| .++|+.+|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~---~~e~~~~~~~~~~Y~~sK 153 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIP---YVESFPTGTPQSPYGKSK 153 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSS---BCTTSCCCCCSSHHHHHH
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCC---cCcccCCCCCCChHHHHH
Confidence 99999765433445667889999999999999999877 88999999999998764333 256666544 78999999
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEeeCCccCCCC------C----CCChHHHHHHHHH-CCCCceeec------CCCceEee
Q 005818 165 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQ------F----PEKLIPKFILLAM-KGKPLPIHG------DGSNVRSY 226 (676)
Q Consensus 165 ~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~ 226 (676)
..+|.+++.+++++ +++++++||+++||+.. . ...+++.+...+. .+..+.+++ ++.+.++|
T Consensus 154 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 233 (338)
T 1udb_A 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeee
Confidence 99999999988876 89999999999999842 1 2346666666655 445555554 56788999
Q ss_pred eeHHHHHHHHHHHHhcC--CC-CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCC
Q 005818 227 LYCEDVAEAFDTILHKG--EV-GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLG 302 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~--~~-~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg 302 (676)
+|++|+|++++.++++. .. +++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|++ .||
T Consensus 234 i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG 311 (338)
T 1udb_A 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHC
T ss_pred EEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc--ceeCCCCCCchhhhhcCHHHHHHHcC
Confidence 99999999999998753 23 368999999999999999999999997643 3333334434455678999997 499
Q ss_pred CcccCCHHHHHHHHHHHHhhCC
Q 005818 303 WYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
|+|+++++++|+++++|++++.
T Consensus 312 ~~p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 312 WRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCT
T ss_pred CCcCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999998865
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=327.85 Aligned_cols=312 Identities=21% Similarity=0.245 Sum_probs=247.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+|||||||||||++|++.|+++ +++|++++|.........+.......+++++.+|++|++++.+++...++|+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 45689999999999999999999999 6899999986532111011001113478999999999999999985557899
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI-KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
|||+|+......+.+++...+++|+.++.+++++|++.+ + ++|||+||.++||.....+ ..|+.+..|.++|+.+
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~---~~e~~~~~~~~~Y~~s 154 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIP---QTEKTPFYPRSPYAVA 154 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHH
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCC---CCccCCCCCCChhHHH
Confidence 999999876555567888999999999999999999876 5 8999999999999876443 3677777888999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCCh---HHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
|..+|.+++.++.+++++++++|+.++|||+.....+ +..++..+..+.. ...++++.+.++|+|++|+|++++.+
T Consensus 155 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~ 234 (345)
T 2z1m_A 155 KLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLM 234 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHH
Confidence 9999999999998889999999999999998754333 2334445556653 33567788899999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-----------------eeeec--CCCCCCcccccCHHHHHh
Q 005818 240 LHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ-----------------IKFVE--NRPFNDQRYFLDVQKLKQ 300 (676)
Q Consensus 240 ~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~~~~k~~~ 300 (676)
++++. +++||+++++++|+.|+++.+++.+|.+.+.. ....+ .++.......+|++|+++
T Consensus 235 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (345)
T 2z1m_A 235 MQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMK 313 (345)
T ss_dssp HTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred HhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHH
Confidence 98765 47999999999999999999999999864311 01111 123333455679999975
Q ss_pred -CCCcccCCHHHHHHHHHHHHhhC
Q 005818 301 -LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 301 -lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
|||+|+++++++|+++++|++++
T Consensus 314 ~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 314 KLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp HHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HcCCcccCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999874
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=330.56 Aligned_cols=310 Identities=23% Similarity=0.258 Sum_probs=245.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCC---CCCCeEEEEecCCCHHHHHHHHccC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSR---LSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~---~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
+|+|||||||||||++|++.|+++ +++|++++|...... ...+.... ...+++++.+|+.|++++.+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 378999999999999999999999 688998888653211 11111000 2357899999999999999998655
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC---ceEEEEecccccCCCCCCcCCCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI---KRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 157 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~---~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 157 (676)
++|+|||+|+......+.+++...+++|+.++.+++++|++.+ + ++|||+||.++|+.....+ .+|+++..|.
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~---~~E~~~~~~~ 177 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIP---QKETTPFYPR 177 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSS---BCTTSCCCCC
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCC---CCccCCCCCC
Confidence 7899999999876544456778899999999999999999876 6 7999999999998765433 3677778888
Q ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC---hHHHHHHHHHCCC-CceeecCCCceEeeeeHHHHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a 233 (676)
++|+.+|..+|.+++.++.+++++++++|++.+|||+..... .+..++..+..+. ....++++.+.++|+|++|+|
T Consensus 178 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 257 (375)
T 1t2a_A 178 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 257 (375)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence 999999999999999998888999999999999999864332 2344555555564 334568888999999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-----------------eeeec--CCCCCCcccccC
Q 005818 234 EAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ-----------------IKFVE--NRPFNDQRYFLD 294 (676)
Q Consensus 234 ~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~~ 294 (676)
++++.+++++. +++||+++++++|+.|+++.+++.+|.+.+.. ....+ .++.......+|
T Consensus 258 ~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 336 (375)
T 1t2a_A 258 EAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGD 336 (375)
T ss_dssp HHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred HHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCC
Confidence 99999998765 47999999999999999999999999763211 01111 123333456789
Q ss_pred HHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 295 VQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 295 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
++|+++ |||+|+++++++|+++++|+++.
T Consensus 337 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 366 (375)
T 1t2a_A 337 CTKAKQKLNWKPRVAFDELVREMVHADVEL 366 (375)
T ss_dssp CHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence 999985 99999999999999999999874
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=334.64 Aligned_cols=311 Identities=20% Similarity=0.282 Sum_probs=245.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-----cCCCC------------CCCCCCeEEEEecCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-----KNLNP------------SRLSPNFKFIKGDVA 68 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-----~~~~~------------~~~~~~v~~v~~Dl~ 68 (676)
.+++|||||||||||++|++.|+++ +++|++++|....... ..+.. .....+++++.+|+.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 4689999999999999999999999 6889988875321100 00000 001347899999999
Q ss_pred CHHHHHHHHccCCCCEEEEccccCCcCCcCCChH---HHHHHHHHHHHHHHHHHHHcCCC-ceEEEEecccccCCCCCCc
Q 005818 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSF---EFTKNNIYGTHVLLEACKITGQI-KRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 69 d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~nv~~~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~ 144 (676)
|++++.+++...++|+|||+|+.........++. ..+++|+.|+.+++++|++.+ + ++|||+||.++||.....
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~- 165 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNID- 165 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSC-
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCC-
Confidence 9999999985446999999999876433334443 478999999999999999887 5 599999999999876522
Q ss_pred CCCCCCC--------------CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC-------------
Q 005818 145 VVGNHEA--------------SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP------------- 197 (676)
Q Consensus 145 ~~~~~e~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~------------- 197 (676)
. .|+ .+..|.++|+.+|..+|.+++.+++++|++++++||+.||||+..+
T Consensus 166 ~---~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~ 242 (404)
T 1i24_A 166 I---EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242 (404)
T ss_dssp B---CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred C---CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence 1 222 3667888999999999999999988889999999999999998642
Q ss_pred ----CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC-C--ceEEEcCCCcccHHHHHHHHHHH-
Q 005818 198 ----EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV-G--HVYNIGTKKERRVIDVATDICKL- 269 (676)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~-~--~~y~i~~~~~~s~~el~~~i~~~- 269 (676)
..++..++..+..+.++.+++++.+.++|+|++|+|++++.+++++.. + ++||+++ +++|+.|+++.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~ 321 (404)
T 1i24_A 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAG 321 (404)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHH
Confidence 356788888888888888889999999999999999999999987653 4 5999998 889999999999998
Q ss_pred --hCCCCCcceeeecCCCC--CCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhhCCCC
Q 005818 270 --FSLNPDTQIKFVENRPF--NDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDW 326 (676)
Q Consensus 270 --~g~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~~ 326 (676)
+|.+.+ +...+.... ....+.+|++|+++|||+|+++++++++++++|+....+.
T Consensus 322 ~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 322 SKLGLDVK--KMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp HTTTCCCC--EEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred HhhCCCcc--ccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence 676543 222232221 2234567999998999999999999999999999876543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=328.25 Aligned_cols=310 Identities=22% Similarity=0.277 Sum_probs=244.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCC-----CCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSR-----LSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
||+|||||||||||+++++.|+++ +++|++++|.........+.... ...+++++.+|++|++++.+++...+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 478999999999999999999999 68999998865321111111100 13578999999999999999986557
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCC---ceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI---KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~---~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
+|+|||+|+......+.+++...+++|+.++.+++++|+..+ + ++|||+||.++|+.....+ .+|+.+..|.+
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~---~~E~~~~~~~~ 154 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRS 154 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSS---BCTTSCCCCCS
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCC---CCccCCCCCCC
Confidence 899999999877666677888899999999999999999876 6 7999999999998765433 36777888899
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC---hHHHHHHHHHCCCC-ceeecCCCceEeeeeHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMKGKP-LPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D~a~ 234 (676)
+|+.+|..+|.+++.++.+++++++++|++.+|||+..... ++..++..+..+.. ...++++.+.++|+|++|+|+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 234 (372)
T 1db3_A 155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence 99999999999999999888999999999999999864332 34455666666753 445688899999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc---------------------------eeeec--CCC
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ---------------------------IKFVE--NRP 285 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~---------------------------~~~~~--~~~ 285 (676)
+++.+++++. +++||+++++++|+.|+++.+.+.+|.+.+.. ..+.+ .++
T Consensus 235 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1db3_A 235 MQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313 (372)
T ss_dssp HHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred HHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCC
Confidence 9999998765 47999999999999999999999998643211 00111 122
Q ss_pred CCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 286 FNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 286 ~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.....+.+|++|+++ |||+|+++++++|+++++||+++
T Consensus 314 ~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 352 (372)
T 1db3_A 314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA 352 (372)
T ss_dssp CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence 233456689999975 99999999999999999999875
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=326.71 Aligned_cols=299 Identities=22% Similarity=0.280 Sum_probs=243.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC---CC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---KI 82 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---~~ 82 (676)
++|+|||||||||||++|++.|+++| .++|++++|.........+ .++. +.+|+.|.+.+..+++.. ++
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~~ 116 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNL------VDLN-IADYMDKEDFLIQIMAGEEFGDV 116 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECCSSGGGGGGT------TTSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecCCCcchhhcc------cCce-EeeecCcHHHHHHHHhhcccCCC
Confidence 35789999999999999999999994 1778888886532211111 1233 679999999999888421 69
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
|+|||+|+.... +..++...+++|+.++.+++++|++.+ + +|||+||.++|+.....+ .+|+++..|.++|+.
T Consensus 117 d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~~ 189 (357)
T 2x6t_A 117 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDF---IESREYEKPLNVFGY 189 (357)
T ss_dssp CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCC---CSSGGGCCCSSHHHH
T ss_pred CEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCC---cCCcCCCCCCChhHH
Confidence 999999998654 456778899999999999999999987 7 999999999998765433 367778888999999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceeecCCCc-eEeeeeHHHHHHHHH
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSN-VRSYLYCEDVAEAFD 237 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~ai~ 237 (676)
+|..+|.+++.++++++++++++||++||||+..+ ..++..++..+..+..+.+++++.+ .++|+|++|+|++++
T Consensus 190 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~ 269 (357)
T 2x6t_A 190 SKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNL 269 (357)
T ss_dssp HHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHH
Confidence 99999999999988889999999999999998643 3577888888888888888888888 999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC----CCCcccccCHHHHHhCCC-cccCCHHHH
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP----FNDQRYFLDVQKLKQLGW-YERVTWEEG 312 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~k~~~lg~-~~~~~~~~~ 312 (676)
.+++++. +++||+++++++|+.|+++.+.+.+|.+ . +.+.+... .......+|.+|+++||| .|.++++++
T Consensus 270 ~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~ 345 (357)
T 2x6t_A 270 WFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-Q--IEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEG 345 (357)
T ss_dssp HHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-C--CEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHH
T ss_pred HHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC-C--ceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHHH
Confidence 9998876 8899999999999999999999999986 2 22222111 112345678999999999 788999999
Q ss_pred HHHHHHHHhhC
Q 005818 313 LQKTMKWYISN 323 (676)
Q Consensus 313 l~~~~~~~~~~ 323 (676)
|+++++|++++
T Consensus 346 l~~~~~~~~~~ 356 (357)
T 2x6t_A 346 VTEYMAWLNRD 356 (357)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhc
Confidence 99999999753
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=326.88 Aligned_cols=309 Identities=23% Similarity=0.253 Sum_probs=246.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCC-----CCC-CeEEEEecCCCHHHHHHHHccC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSR-----LSP-NFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-----~~~-~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
+++|||||||||||++|++.|+++ +++|++++|.........+.... ... +++++.+|+.|.+++.+++...
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 105 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 105 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence 379999999999999999999999 68899988865321111111110 012 7899999999999999998555
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-----eEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-----RFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-----~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
++|+|||+|+......+.+++...+++|+.++.+|+++|+..+ ++ +|||+||.++||.... +.+|+++..
T Consensus 106 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~----~~~E~~~~~ 180 (381)
T 1n7h_A 106 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPP----PQSETTPFH 180 (381)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCS----SBCTTSCCC
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCC----CCCCCCCCC
Confidence 7899999999876544456778899999999999999999876 55 9999999999998764 236777888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC---hHHHHHHHHHCCCC-ceeecCCCceEeeeeHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMKGKP-LPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D 231 (676)
|.+.|+.+|..+|.+++.++.+++++++++|++.+|||+..... .+..++..+..+.. ...++++.+.++|+|++|
T Consensus 181 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~D 260 (381)
T 1n7h_A 181 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD 260 (381)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHH
Confidence 89999999999999999998888999999999999999864332 23444555555543 345688889999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHHh-CCCcccCC
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLKQ-LGWYERVT 308 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~~~~~ 308 (676)
+|++++.+++++. +++||+++++++|+.|+++.+.+.+|.+....+.+.+ .++.......+|++|+++ |||+|+++
T Consensus 261 va~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 339 (381)
T 1n7h_A 261 YVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVG 339 (381)
T ss_dssp HHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSC
T ss_pred HHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCC
Confidence 9999999998765 4799999999999999999999999975322223222 233334456789999985 99999999
Q ss_pred HHHHHHHHHHHHhhC
Q 005818 309 WEEGLQKTMKWYISN 323 (676)
Q Consensus 309 ~~~~l~~~~~~~~~~ 323 (676)
++++|+++++||.++
T Consensus 340 l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 340 FEKLVKMMVDEDLEL 354 (381)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=324.26 Aligned_cols=303 Identities=22% Similarity=0.368 Sum_probs=240.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH-HHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA-DLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~~~~~~~~~~~d~Vi 86 (676)
|+|||||||||||++|++.|++++ +++|++++|..... ..+ ....+++++.+|+.|. +.+.+++ .++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~--~~~---~~~~~~~~~~~D~~~~~~~~~~~~--~~~d~vi 72 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAI--SRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCDVVL 72 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGG--GGG---TTCTTEEEEECCTTTCSHHHHHHH--HHCSEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeCCcchH--HHh---hcCCCeEEEeccccCcHHHHHhhc--cCCCEEE
Confidence 589999999999999999999973 57899888865321 111 1235799999999984 5677787 5899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC-------CCCCh
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL-------LPTNP 159 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~p~~~ 159 (676)
|+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+. +|+++. .|.+.
T Consensus 73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~---~e~~~~~~~~~~~~~~~~ 147 (345)
T 2bll_A 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKPRWI 147 (345)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSB---CTTTCCCBCCCTTCGGGH
T ss_pred EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCc---CCcccccccCcccCcccc
Confidence 9999866433345677889999999999999999876 89999999999987654332 343322 34558
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--------CChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
|+.+|..+|.+++.++++++++++++||+.||||+... ..++..++..+..+.++.+++++.+.++|+|++|
T Consensus 148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence 99999999999999988889999999999999998642 2366778888888888888888889999999999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcc-eeee------cCC------CCCCcccccC
Q 005818 232 VAEAFDTILHKG---EVGHVYNIGTKK-ERRVIDVATDICKLFSLNPDTQ-IKFV------ENR------PFNDQRYFLD 294 (676)
Q Consensus 232 ~a~ai~~~~~~~---~~~~~y~i~~~~-~~s~~el~~~i~~~~g~~~~~~-~~~~------~~~------~~~~~~~~~~ 294 (676)
+|++++.+++++ ..+++||+++++ ++|+.|+++.+++.+|.+.... +... ... ........+|
T Consensus 228 va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (345)
T 2bll_A 228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 307 (345)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence 999999999865 357899999986 8999999999999998754311 1000 000 0112345689
Q ss_pred HHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005818 295 VQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 295 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.+|+++ |||+|+++++++|+++++|++++
T Consensus 308 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~ 337 (345)
T 2bll_A 308 IRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (345)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccccHHHHHHHHHHHHHHc
Confidence 999975 99999999999999999999875
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=324.31 Aligned_cols=298 Identities=17% Similarity=0.186 Sum_probs=235.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|+++..+++|++++|...... ...+++++.+|+.|++++.+++...++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 73 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--------VVNSGPFEVVNALDFNQIEHLVEVHKITDIY 73 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--------HHHSSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--------ccCCCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence 57899999999999999999999822577888887542211 1135788999999999999998555899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+.... ....++...++.|+.++.+++++|++.+ +++|||+||.++|+..... ....|+.+..|.++|+.+|..
T Consensus 74 h~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~~~~~Y~~sK~~ 149 (312)
T 2yy7_A 74 LMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPK--ENTPQYTIMEPSTVYGISKQA 149 (312)
T ss_dssp ECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCS--SSBCSSCBCCCCSHHHHHHHH
T ss_pred ECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCC--CCccccCcCCCCchhHHHHHH
Confidence 99997543 1235677899999999999999999877 8899999999999875432 123566777889999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----C-hHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----K-LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
+|.+++.++++++++++++||+.+||++..+. . +...+.+.+.. ..+.+++++.+.++|+|++|+|++++.+++
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 228 (312)
T 2yy7_A 150 GERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD-KKYECFLSSETKMPMMYMDDAIDATINIMK 228 (312)
T ss_dssp HHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT-SEEEESSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC-CCeEEecCCCceeeeeeHHHHHHHHHHHHh
Confidence 99999999888899999999999999764332 2 34444444444 446677888899999999999999999998
Q ss_pred cCCC----CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCC---CCcccccCHHHHHh-CCCcccCCHHHHH
Q 005818 242 KGEV----GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF---NDQRYFLDVQKLKQ-LGWYERVTWEEGL 313 (676)
Q Consensus 242 ~~~~----~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~k~~~-lg~~~~~~~~~~l 313 (676)
++.. +++||+++ +.+|+.|+++.+.+.+|. ..+.+.+.... ......+|++|+++ |||+|+++++++|
T Consensus 229 ~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~---~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l 304 (312)
T 2yy7_A 229 APVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE---FTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMT 304 (312)
T ss_dssp SCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT---CEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHH
T ss_pred CcccccccCceEEeCC-CccCHHHHHHHHHHHCCC---CceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHH
Confidence 7643 47999996 889999999999998873 22333222110 11234679999985 9999999999999
Q ss_pred HHHHHHHh
Q 005818 314 QKTMKWYI 321 (676)
Q Consensus 314 ~~~~~~~~ 321 (676)
+++++||+
T Consensus 305 ~~~~~~~k 312 (312)
T 2yy7_A 305 KDMIEHLS 312 (312)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999985
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=321.39 Aligned_cols=296 Identities=22% Similarity=0.280 Sum_probs=223.2
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---CCCCEE
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---EKIDTI 85 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---~~~d~V 85 (676)
+|||||||||||++|++.|+++| .++|++++|.........+ .+++ +.+|+.|.+.+.+++.. .++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNL------VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGGGHHH------HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCCCCchhhhc------Ccce-eccccccHHHHHHHHhccccCCCcEE
Confidence 59999999999999999999994 1778888876532211111 1223 67999999999988842 159999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
||+|+.... +..++...++.|+.++.+++++|++.+ + +|||+||.++|+.....+ .+|+++..|.++|+.+|.
T Consensus 73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~~sK~ 145 (310)
T 1eq2_A 73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDF---IESREYEKPLNVYGYSKF 145 (310)
T ss_dssp EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCB---CSSGGGCCCSSHHHHHHH
T ss_pred EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCC---CCCCCCCCCCChhHHHHH
Confidence 999998654 456778899999999999999999988 7 999999999999766433 367778888999999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceeecCCCc-eEeeeeHHHHHHHHHHHH
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSN-VRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~D~a~ai~~~~ 240 (676)
.+|.+++.++++++++++++||+.+|||+..+ ..++..+++.+..+.++.+++++.+ .++|+|++|+|++++.++
T Consensus 146 ~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~ 225 (310)
T 1eq2_A 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (310)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence 99999999988889999999999999998642 3678888888888888887888888 999999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC----CCCcccccCHHHHHhCCC-cccCCHHHHHHH
Q 005818 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP----FNDQRYFLDVQKLKQLGW-YERVTWEEGLQK 315 (676)
Q Consensus 241 ~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~k~~~lg~-~~~~~~~~~l~~ 315 (676)
+++. +++||+++++++|+.|+++.+.+.+|.+ . +.+.+... .......+|.+|+++||| .|.++++++|++
T Consensus 226 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~ 301 (310)
T 1eq2_A 226 ENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-Q--IEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTE 301 (310)
T ss_dssp HHCC-CEEEEESCSCCBCHHHHHHHC------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHH
T ss_pred hcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC-C--ceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHH
Confidence 8877 8899999999999999999999999875 2 11111111 112335678999999999 788999999999
Q ss_pred HHHHHhhC
Q 005818 316 TMKWYISN 323 (676)
Q Consensus 316 ~~~~~~~~ 323 (676)
+++||+++
T Consensus 302 ~~~~~~~~ 309 (310)
T 1eq2_A 302 YMAWLNRD 309 (310)
T ss_dssp HHHHTC--
T ss_pred HHHHHHhc
Confidence 99998764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=318.54 Aligned_cols=276 Identities=15% Similarity=0.163 Sum_probs=224.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+||||| +||||++|++.|+++ +++|++++|.... ...+++++.+|+.|++.+.+++. .++|+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~ 66 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH-LRPEI 66 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG-GCCSE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc-CCCCE
Confidence 4568999999 599999999999999 6788888886421 24678999999999999988884 24999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+... .++...++.|+.++.+++++|++.+ +++|||+||.++||.....+. +|+++..|.++|+.+|
T Consensus 67 vih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~p~~~Y~~sK 137 (286)
T 3gpi_A 67 LVYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWL---DEDTPPIAKDFSGKRM 137 (286)
T ss_dssp EEECHHHHH-----HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEE---CTTSCCCCCSHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCC---CCCCCCCCCChhhHHH
Confidence 999998632 3455777889999999999999876 899999999999998765544 7788888999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc--
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK-- 242 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~-- 242 (676)
..+|++ +.+ ++++++||+++||++.. .++..+.. . ..++++.+.++|+|++|+|++++.++++
T Consensus 138 ~~~E~~-~~~-----~~~~ilR~~~v~G~~~~------~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~ 202 (286)
T 3gpi_A 138 LEAEAL-LAA-----YSSTILRFSGIYGPGRL------RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRS 202 (286)
T ss_dssp HHHHHH-GGG-----SSEEEEEECEEEBTTBC------HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-Hhc-----CCeEEEecccccCCCch------hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhc
Confidence 999998 543 99999999999999873 23344444 2 2236778899999999999999999987
Q ss_pred -CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccC-CHHHHHHHHHHHH
Q 005818 243 -GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERV-TWEEGLQKTMKWY 320 (676)
Q Consensus 243 -~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~-~~~~~l~~~~~~~ 320 (676)
...+++||+++++++|+.|+++.+++.+|.+.+.... + .......+|++|+++|||+|++ +++++|+++++|+
T Consensus 203 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~---~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~ 277 (286)
T 3gpi_A 203 HAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT--P---PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAM 277 (286)
T ss_dssp TSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC--C---CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHH
T ss_pred cCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC--c---ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHH
Confidence 4678999999999999999999999999987643221 1 2334567899999999999999 7999999999999
Q ss_pred hhC
Q 005818 321 ISN 323 (676)
Q Consensus 321 ~~~ 323 (676)
..+
T Consensus 278 ~~~ 280 (286)
T 3gpi_A 278 REG 280 (286)
T ss_dssp TC-
T ss_pred hcc
Confidence 864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=316.74 Aligned_cols=295 Identities=16% Similarity=0.215 Sum_probs=231.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|+++ +++|++++|..... ..+ ...+++++.+|+.|++++.+++ .++|+||
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~l----~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 82 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQI--QRL----AYLEPECRVAEMLDHAGLERAL--RGLDGVI 82 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCG--GGG----GGGCCEEEECCTTCHHHHHHHT--TTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhh--hhh----ccCCeEEEEecCCCHHHHHHHH--cCCCEEE
Confidence 469999999999999999999999 68899988864321 111 1237899999999999999998 6899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC----CChhHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP----TNPYSA 162 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p----~~~Y~~ 162 (676)
|+|+.... +.+++...+++|+.++.+++++|++.+ +++|||+||.++|+...... .. +|+++..| .++|+.
T Consensus 83 h~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~-~~-~E~~~~~p~~~~~~~Y~~ 157 (342)
T 2x4g_A 83 FSAGYYPS--RPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGL-PG-HEGLFYDSLPSGKSSYVL 157 (342)
T ss_dssp EC--------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSS-CB-CTTCCCSSCCTTSCHHHH
T ss_pred ECCccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCC-CC-CCCCCCCccccccChHHH
Confidence 99997542 335666789999999999999999987 89999999999998765421 12 67777788 889999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC-CCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-FPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
+|..+|.+++.++++ |++++++||+.+||++. .+ . +..++..+..+..+.+ +.+.++++|++|+|++++.+++
T Consensus 158 sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~ 231 (342)
T 2x4g_A 158 CKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALE 231 (342)
T ss_dssp HHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHh
Confidence 999999999998877 99999999999999987 32 2 4566777777776654 5678899999999999999998
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeee---------------cC-----CCC----CCcccccCHHH
Q 005818 242 KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFV---------------EN-----RPF----NDQRYFLDVQK 297 (676)
Q Consensus 242 ~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---------------~~-----~~~----~~~~~~~~~~k 297 (676)
++..+++||+++++ +|+.|+++.+.+.+|.+.+..++.. .. .+. ......+|++|
T Consensus 232 ~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 310 (342)
T 2x4g_A 232 RGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRK 310 (342)
T ss_dssp HSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHH
T ss_pred CCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHH
Confidence 77668899999999 9999999999999998654311100 00 001 12356789999
Q ss_pred HHh-CCC-cccCCHHHHHHHHHHHHhhCC
Q 005818 298 LKQ-LGW-YERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 298 ~~~-lg~-~~~~~~~~~l~~~~~~~~~~~ 324 (676)
+++ ||| +| ++++++|+++++|+++++
T Consensus 311 ~~~~lG~~~p-~~~~~~l~~~~~~~~~~g 338 (342)
T 2x4g_A 311 AREELGFFST-TALDDTLLRAIDWFRDNG 338 (342)
T ss_dssp HHHHHCCCCC-SCHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCCC-CCHHHHHHHHHHHHHHcC
Confidence 986 999 99 899999999999999764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=315.56 Aligned_cols=295 Identities=21% Similarity=0.293 Sum_probs=234.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
.+++|+|||||||||||++|++.|+++ +++|++++|...... . ... ...+++++.+|++|.+++.+++...++|
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~-~~~--~l~~v~~~~~Dl~d~~~~~~~~~~~~~D 90 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKR-E-VLP--PVAGLSVIEGSVTDAGLLERAFDSFKPT 90 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCG-G-GSC--SCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccch-h-hhh--ccCCceEEEeeCCCHHHHHHHHhhcCCC
Confidence 355789999999999999999999999 688999988542211 0 001 1157899999999999999998433899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|||+|+..... +..++. +++|+.++.+++++|.+.+ +++|||+||.++|+...... .+.+|++ .|.+.|+.+
T Consensus 91 ~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~-~~~~E~~--~~~~~Y~~s 163 (330)
T 2pzm_A 91 HVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVP-IPIDSPT--APFTSYGIS 163 (330)
T ss_dssp EEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSS-BCTTCCC--CCCSHHHHH
T ss_pred EEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCC-CCcCCCC--CCCChHHHH
Confidence 999999986543 233333 8999999999999999887 88999999999998764320 0224444 677899999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH-HHHHHHhc
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE-AFDTILHK 242 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~-ai~~~~~~ 242 (676)
|..+|.+++.+ +++++++||+++|||+. ...++..++..+..+. .+++++. .++++|++|+|+ +++.++++
T Consensus 164 K~~~e~~~~~~----~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~ 235 (330)
T 2pzm_A 164 KTAGEAFLMMS----DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEG 235 (330)
T ss_dssp HHHHHHHHHTC----SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHc----CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhc
Confidence 99999988764 89999999999999986 4567777777777765 4455666 889999999999 99999987
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHH-----HhCCCcccCCHHHHHHHHH
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL-----KQLGWYERVTWEEGLQKTM 317 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~lg~~~~~~~~~~l~~~~ 317 (676)
+. +++||++++.++|+.|+++.+.+.+|.+ +. .+.+..+ ......+|++|+ ++|||+|+++++++|++++
T Consensus 236 ~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~--~~~~~~~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~ 310 (330)
T 2pzm_A 236 RP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LA--EPVPVVA-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQL 310 (330)
T ss_dssp CC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-CS--SCCCEEC-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHH
T ss_pred CC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC-Cc--eeCCCCc-chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHH
Confidence 66 8899999999999999999999999986 32 2222222 234456677776 7899999999999999999
Q ss_pred HHHhhCC
Q 005818 318 KWYISNP 324 (676)
Q Consensus 318 ~~~~~~~ 324 (676)
+|++++.
T Consensus 311 ~~~~~~~ 317 (330)
T 2pzm_A 311 AWYDKYG 317 (330)
T ss_dssp HHHHHHC
T ss_pred HHHHhhC
Confidence 9998753
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=310.09 Aligned_cols=293 Identities=20% Similarity=0.258 Sum_probs=231.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++|+|||||||||||++|++.|+++ +++|++++|..... ...+.. ..+++++.+|+.|++++.+++...++|+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGR-REHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCC-GGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccc-hhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 55789999999999999999999999 68899998864321 111111 1578999999999999999985445999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccC----CCCCCcCCCCCCCCCCCCC-Ch
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYG----ETDEDAVVGNHEASQLLPT-NP 159 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg----~~~~~~~~~~~e~~~~~p~-~~ 159 (676)
|||+|+..... +..++. +++|+.++.+++++|+..+ +++|||+||.++|+ .... + .+|++ .|. +.
T Consensus 93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~-~---~~E~~--~p~~~~ 162 (333)
T 2q1w_A 93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV-R---LDHPR--NPANSS 162 (333)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB-C---TTSCC--CCTTCH
T ss_pred EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC-C---cCCCC--CCCCCc
Confidence 99999986543 223333 8999999999999999977 88999999999998 4432 2 24444 667 89
Q ss_pred hHHHHHHHHHHHHH-HHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 160 YSATKAGAEMLVMA-YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 160 Y~~sK~~~E~~~~~-~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
|+.+|..+|.+++. ++ +++++||+++|||+. ...+++.+++.+..+. .+++ +...++++|++|+|++++.
T Consensus 163 Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 163 YAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN-VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC-CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC-cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 99999999999886 53 799999999999983 2467777887777776 4445 6778899999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcce-eeecC-CCCCCcccccCHHHHHhCCCcccCCHHHHHHHH
Q 005818 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQI-KFVEN-RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKT 316 (676)
Q Consensus 239 ~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~ 316 (676)
+++++. +++||++++..+|+.|+++.+.+.+|.+ .... +..+. .........+|++|++++||+|+++++++|+++
T Consensus 234 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~ 311 (333)
T 2q1w_A 234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAA 311 (333)
T ss_dssp HHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHH
Confidence 998776 8899999999999999999999999986 3211 11111 111124567899999867999999999999999
Q ss_pred HHHHhhCC
Q 005818 317 MKWYISNP 324 (676)
Q Consensus 317 ~~~~~~~~ 324 (676)
++||++++
T Consensus 312 ~~~~~~~~ 319 (333)
T 2q1w_A 312 VAYFREYG 319 (333)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
Confidence 99999764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=313.99 Aligned_cols=295 Identities=20% Similarity=0.239 Sum_probs=206.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|+++ +++|++++|.... ++ ++.+|+.|++++.+++...++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC--------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 579999999999999999999999 6889998875321 12 7889999999999888544799999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+......+..++...+++|+.++.+++++|++.+ + +|||+||.++|+... . +.+|+++..|.+.|+.+|..
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~-~---~~~E~~~~~~~~~Y~~sK~~ 139 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTN-P---PYREEDIPAPLNLYGKTKLD 139 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSS-C---SBCTTSCCCCCSHHHHHHHH
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCC-C---CCCCCCCCCCcCHHHHHHHH
Confidence 9999876555566778899999999999999999987 5 999999999998832 2 23677788889999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCC-CChHHHHHHHHH-CCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC-
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG- 243 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~- 243 (676)
+|.+++.+ +++++++||+.|||++..+ ..++..++..+. .+..+.+. +.+.++++|++|+|++++.+++++
T Consensus 140 ~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~ 213 (315)
T 2ydy_A 140 GEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM 213 (315)
T ss_dssp HHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc
Confidence 99998865 5788999999999998642 145556666666 67666554 357789999999999999998753
Q ss_pred ---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeee--cC-CCCCCcccccCHHHHHhCCCcccCCHHHHHHHHH
Q 005818 244 ---EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFV--EN-RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTM 317 (676)
Q Consensus 244 ---~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~-~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~ 317 (676)
..+++||+++++++|+.|+++.+.+.+|.+.+...... +. .........+|++|++++||+|+++++++|++++
T Consensus 214 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~ 293 (315)
T 2ydy_A 214 LDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 293 (315)
T ss_dssp TCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHH
T ss_pred cccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHH
Confidence 56789999999999999999999999998654211111 11 1112245678999998779999999999999999
Q ss_pred HHHhhCCCCccc
Q 005818 318 KWYISNPDWWGD 329 (676)
Q Consensus 318 ~~~~~~~~~~~~ 329 (676)
+||+++..|+..
T Consensus 294 ~~~~~~~~~~~~ 305 (315)
T 2ydy_A 294 WPFLIDKRWRQT 305 (315)
T ss_dssp GGGCC-------
T ss_pred HHHccchhhhhc
Confidence 999988766544
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=313.12 Aligned_cols=282 Identities=20% Similarity=0.190 Sum_probs=233.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+ + +++|++++|.. ..+.+|+.|++++.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~-----------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHS-----------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTC-----------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEecccc-----------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999 7 68999999853 135689999999999985446999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+......+..++...++.|+.++.+++++|++.+ + +|||+||.++|+.....+ ..|+++..|.++|+.+|..+
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~---~~E~~~~~p~~~Y~~sK~~~ 135 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIP---WQETDATSPLNVYGKTKLAG 135 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCC---BCTTSCCCCSSHHHHHHHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCC---CCCCCCCCCccHHHHHHHHH
Confidence 999876555567888999999999999999999877 5 899999999999876433 36777888899999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC--C-
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG--E- 244 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~--~- 244 (676)
|++++.++ .+++++||+++||++.. +++..+++.+..+.++.+.++ +.++++|++|+|++++.+++++ .
T Consensus 136 E~~~~~~~----~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~ 207 (299)
T 1n2s_A 136 EKALQDNC----PKHLIFRTSWVYAGKGN--NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSSC--CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHhC----CCeEEEeeeeecCCCcC--cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhcccc
Confidence 99998754 48999999999999863 677888888888877766653 7899999999999999999875 3
Q ss_pred -CCceEEEcCCCcccHHHHHHHHHHHhCCCCC----cceeeecC-----CCCCCcccccCHHHHHh-CCCcccCCHHHHH
Q 005818 245 -VGHVYNIGTKKERRVIDVATDICKLFSLNPD----TQIKFVEN-----RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGL 313 (676)
Q Consensus 245 -~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~----~~~~~~~~-----~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l 313 (676)
.+++||+++++++|+.|+++.+.+.+|.+.. ..+...+. .........+|++|+++ |||+|+ +++++|
T Consensus 208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l 286 (299)
T 1n2s_A 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (299)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred ccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHH
Confidence 3789999999999999999999999986521 11222221 11122456789999985 999998 899999
Q ss_pred HHHHHHHhhC
Q 005818 314 QKTMKWYISN 323 (676)
Q Consensus 314 ~~~~~~~~~~ 323 (676)
+++++|++++
T Consensus 287 ~~~~~~~~~~ 296 (299)
T 1n2s_A 287 KRMLTEMFTT 296 (299)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhc
Confidence 9999999875
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=305.85 Aligned_cols=275 Identities=21% Similarity=0.232 Sum_probs=230.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
.++|||||||||||++|++.|+++ +++|++++|. .+|+.|++++.+++...++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQ---------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCc---------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 579999999999999999999999 6899999884 27999999999998444899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+......+..++...++.|+.++.+++++|++.+ + +|||+||.++|+.....+ .+|+++..|.++|+.+|..
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~---~~E~~~~~~~~~Y~~sK~~ 143 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEP---ITEFDEVNPQSAYGKTKLE 143 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSC---BCTTSCCCCCSHHHHHHHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCC---CCCCCCCCCccHHHHHHHH
Confidence 9999876544456778899999999999999999987 6 999999999999765433 3677788889999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCC
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~ 246 (676)
+|.+++.+ +.+++++||+.|||+ . ..++..++..+..+..+.+.+ .+.++++|++|+|++++.+++++ .+
T Consensus 144 ~E~~~~~~----~~~~~~lR~~~v~G~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~~ 213 (292)
T 1vl0_A 144 GENFVKAL----NPKYYIVRTAWLYGD-G--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-NY 213 (292)
T ss_dssp HHHHHHHH----CSSEEEEEECSEESS-S--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-CC
T ss_pred HHHHHHhh----CCCeEEEeeeeeeCC-C--cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-CC
Confidence 99999875 347999999999999 3 367777777777777666655 47889999999999999999877 68
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC-----CCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHH
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN-----RPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~ 320 (676)
++||+++++++|+.|+++.+.+.+|.+.+. ...+. .........+|++|+++ |||+|+ +++++|+++++||
T Consensus 214 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~ 290 (292)
T 1vl0_A 214 GTFHCTCKGICSWYDFAVEIFRLTGIDVKV--TPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLL 290 (292)
T ss_dssp EEEECCCBSCEEHHHHHHHHHHHHCCCCEE--EEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHH
T ss_pred cEEEecCCCCccHHHHHHHHHHHhCCCCce--eeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHh
Confidence 899999999999999999999999986432 11111 11123456789999986 999999 9999999999998
Q ss_pred hh
Q 005818 321 IS 322 (676)
Q Consensus 321 ~~ 322 (676)
++
T Consensus 291 ~~ 292 (292)
T 1vl0_A 291 QM 292 (292)
T ss_dssp TC
T ss_pred cC
Confidence 63
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=312.95 Aligned_cols=306 Identities=16% Similarity=0.129 Sum_probs=242.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCC-----CcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYP-----EYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|++|+||||||+||||++|++.|+++|+ .++|++++|...... .....+++++.+|+.|++++.+++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~- 84 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP------AGFSGAVDARAADLSAPGEAEKLVE- 84 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC------TTCCSEEEEEECCTTSTTHHHHHHH-
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc------cccCCceeEEEcCCCCHHHHHHHHh-
Confidence 5678999999999999999999999931 078999988642111 0124568999999999999998884
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC----CCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG----QIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
.++|+|||+|+.... .+.+++...+++|+.++.+++++|++.+ ++++|||+||.++|+.....+ .+|+++..
T Consensus 85 ~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~---~~E~~~~~ 160 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP---IPDEFHTT 160 (342)
T ss_dssp TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS---BCTTCCCC
T ss_pred cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC---cCCCCCCC
Confidence 489999999997642 2345677899999999999999998764 368999999999998764332 36778888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccC-CCCCC---CChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG-PNQFP---EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
|.++|+.+|..+|.++++++++++++.+++|++.+|| |+... ..++..+++.+..+..+.++.++...++++|++|
T Consensus 161 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 240 (342)
T 2hrz_A 161 PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHH
Confidence 8999999999999999999888889999999999998 66422 2466777888888887777666677788999999
Q ss_pred HHHHHHHHHhcCC----CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC----CCCcccccCHHHHHhCCC
Q 005818 232 VAEAFDTILHKGE----VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP----FNDQRYFLDVQKLKQLGW 303 (676)
Q Consensus 232 ~a~ai~~~~~~~~----~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~k~~~lg~ 303 (676)
++++++.+++.+. .+++||++ ++.+|+.|+++.+.+.+|.+....+.+.+... .......+|++|+++|||
T Consensus 241 va~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~ 319 (342)
T 2hrz_A 241 AVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGF 319 (342)
T ss_dssp HHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTC
T ss_pred HHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHHcCC
Confidence 9999999998653 46799996 57899999999999999875321122222110 011123579999988999
Q ss_pred cccCCHHHHHHHHHHHHhh
Q 005818 304 YERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 304 ~~~~~~~~~l~~~~~~~~~ 322 (676)
+|+++++++|+++++|++.
T Consensus 320 ~p~~~l~e~l~~~~~~~~~ 338 (342)
T 2hrz_A 320 TAESSFEEIIQVHIEDELG 338 (342)
T ss_dssp CCCSSHHHHHHHHHHHHST
T ss_pred CCCCCHHHHHHHHHHHhcC
Confidence 9999999999999999973
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=310.26 Aligned_cols=268 Identities=19% Similarity=0.184 Sum_probs=220.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee---ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY---GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRT 461 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~---~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 461 (676)
|+|+|||||||||++|++.|+++|++|.. ..+|++|.+.+.++++..++|+|||+|+.. ....+..++...+++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~~~~ 82 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYT---KVDQAEKERDLAYVI 82 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCccc---ChHHHhcCHHHHHHH
Confidence 58999999999999999999999999855 468999999999999976679999999977 555566788899999
Q ss_pred hhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeec
Q 005818 462 NVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541 (676)
Q Consensus 462 Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 541 (676)
|+.++.+++++|++.++++|++||..+|+.....| .+|+.+..|.+.|+.+|..+|++++.+.. +++++
T Consensus 83 n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~il 151 (287)
T 3sc6_A 83 NAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEG-------YDEFHNPAPINIYGASKYAGEQFVKELHN----KYFIV 151 (287)
T ss_dssp HTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSC-------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS----SEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHhCC----CcEEE
Confidence 99999999999999999999999999997655444 56666778889999999999999998754 46899
Q ss_pred ccCCCCChH------HHHHHHHhcCceeccCC---CccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhc
Q 005818 542 ISSDLNNPR------NFITKISRYNKVVNIPN---SMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYI 612 (676)
Q Consensus 542 r~~~~~g~~------~~~~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~ 612 (676)
|++++|||. .++..+..+......++ +|+|++|+|++++.+++++.+|+||+++++.+|+.|+++.+++.+
T Consensus 152 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~ 231 (287)
T 3sc6_A 152 RTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYA 231 (287)
T ss_dssp EECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCCCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred eeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCCCCeEEEcCCCcccHHHHHHHHHHHc
Confidence 999999984 23333334444333333 899999999999999998888899999999999999999999999
Q ss_pred CCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccCC
Q 005818 613 DPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPNK 667 (676)
Q Consensus 613 g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~ 667 (676)
|.+..+.+++..........+ .+..+|++|+++++|.+ ++|+++|++++.++.+
T Consensus 232 g~~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 232 NMKVNVLPVSTEEFGAAAARP-KYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp TCCCEEEEECHHHHCCSSCCC-SBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred CCCcceeeeehhhcCcccCCC-CcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 988777777655432211111 25788999999666655 6999999999887653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=337.23 Aligned_cols=318 Identities=27% Similarity=0.394 Sum_probs=242.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
+++|+|||||||||||++|++.|+++ +++|++++|...... ...+. .....+++++.+|+.|++++.+++...++
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLE-VLTKHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHH-HHHTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHh-hccCCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 44689999999999999999999999 678988888642210 00000 00134688999999999999999854589
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC-cCCCCCCCCCCCCCChhH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED-AVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~-~~~~~~e~~~~~p~~~Y~ 161 (676)
|+|||+|+........+++.+.+++|+.++.+++++|++.+ +++|||+||.++|+..... ...+..|+.+..|.+.|+
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG 164 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence 99999999876433344566789999999999999999887 8999999999999865321 112235667778889999
Q ss_pred HHHHHHHHHHHHHHHH--cCCCEEEEeeCCccCCCCC----------CCChHHHHHHHHHC-CCCceeec------CCCc
Q 005818 162 ATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMK-GKPLPIHG------DGSN 222 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~--~~l~~~ilR~~~i~G~~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~ 222 (676)
.+|..+|.+++.++++ .+++++++||+++||++.. +..+++.+.+.+.. +.++.+++ ++.+
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 9999999999998776 6899999999999998531 23456655554432 34566665 6788
Q ss_pred eEeeeeHHHHHHHHHHHHhcC-------CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCH
Q 005818 223 VRSYLYCEDVAEAFDTILHKG-------EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV 295 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~-------~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (676)
.++|+|++|+|++++.+++.. ..+++||+++++++|+.|+++.+++.+|.+.+.. ..+........+.+|.
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~d~ 322 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK--VTGRRAGDVLNLTAKP 322 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------CCCCCBCC
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce--ecCCCCCccccccCCH
Confidence 999999999999999988642 2346899999999999999999999999865432 2222233344577899
Q ss_pred HHHH-hCCCcccCCHHHHHHHHHHHHhhCCCCcc
Q 005818 296 QKLK-QLGWYERVTWEEGLQKTMKWYISNPDWWG 328 (676)
Q Consensus 296 ~k~~-~lg~~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (676)
+|++ .|||+|+++++++|+++++|++++..++.
T Consensus 323 ~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~ 356 (699)
T 1z45_A 323 DRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQ 356 (699)
T ss_dssp HHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcchh
Confidence 9997 59999999999999999999998765443
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=306.40 Aligned_cols=296 Identities=19% Similarity=0.219 Sum_probs=232.6
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+|||||||||||++|++.|+++..+++|++++|..... .+++++.+|+.|++++.+++...++|+|||+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 69 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHL 69 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----------TTCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----------cCceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence 59999999999999999999982256788887753211 1567899999999999999855589999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+.... ....++...+++|+.++.+++++|++.+ +++|||+||.++|+..... ....|+.+..|.++|+.+|..+|
T Consensus 70 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~--~~~~e~~~~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 70 AGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPK--NKVPSITITRPRTMFGVTKIAAE 145 (317)
T ss_dssp CCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCS--SSBCSSSCCCCCSHHHHHHHHHH
T ss_pred CcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCC--CCccccccCCCCchHHHHHHHHH
Confidence 997542 2235677889999999999999999887 8899999999999875322 12356677788999999999999
Q ss_pred HHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 169 ~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
.+++.++++++++++++||+.+||+...+. ..+..++.....+..+..++++.+.++|+|++|++++++.+++++.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~ 225 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADR 225 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence 999998888899999999999999764322 2233333444555556777778889999999999999999998754
Q ss_pred ----CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCC---CCCcccccCHHHHHh-CCCcccCCHHHHHHHH
Q 005818 245 ----VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP---FNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKT 316 (676)
Q Consensus 245 ----~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~ 316 (676)
.+++||+++ ..+|+.|+++.+.+.+|. . .+.+.+... .......+|++|+++ |||+|+++++++|+++
T Consensus 226 ~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~--~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~ 301 (317)
T 3ajr_A 226 DKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-F--EIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDM 301 (317)
T ss_dssp GGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-C--CEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred cccccCceEecCC-ccccHHHHHHHHHHHCCc-c--ccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 247999986 679999999999998873 1 233322100 011234679999975 9999999999999999
Q ss_pred HHHHhhC
Q 005818 317 MKWYISN 323 (676)
Q Consensus 317 ~~~~~~~ 323 (676)
++|++++
T Consensus 302 ~~~~~~~ 308 (317)
T 3ajr_A 302 IDHISEK 308 (317)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999874
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=332.66 Aligned_cols=307 Identities=22% Similarity=0.352 Sum_probs=244.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHH-HHHHHccCCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADL-VHFILLTEKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~-~~~~~~~~~~d 83 (676)
+++|+|||||||||||++|++.|++++ +++|++++|..... ..+ ....+++++.+|++|.++ +.+++ .++|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r~~~~~--~~~---~~~~~v~~v~~Dl~d~~~~~~~~~--~~~D 384 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAI--SRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCD 384 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEESCCTTT--GGG---TTCTTEEEEECCTTTCHHHHHHHH--HHCS
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEcCchhh--hhh---ccCCceEEEECCCCCcHHHHHHhh--cCCC
Confidence 456899999999999999999999973 57899998864321 111 123579999999999765 77777 5899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC-------CC
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL-------LP 156 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~p 156 (676)
+|||+|+.........++...++.|+.++.+++++|++.+ ++|||+||.++|+....... +|+++. .|
T Consensus 385 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~---~E~~~~~~~~p~~~p 459 (660)
T 1z7e_A 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKP 459 (660)
T ss_dssp EEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSB---CTTTCCEEECCTTCT
T ss_pred EEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCccc---CCCccccccCcccCC
Confidence 9999999876443445677899999999999999999876 89999999999987654332 444331 45
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--------CChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
.+.|+.+|..+|.+++.++++++++++++||++|||++... ..++..++..+..+.++.+++++.+.++|+|
T Consensus 460 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 460 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 66899999999999999988889999999999999998642 4567788888888888888888889999999
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC-cccHHHHHHHHHHHhCCCCCc-ceeee------------cCCCCCCccc
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKK-ERRVIDVATDICKLFSLNPDT-QIKFV------------ENRPFNDQRY 291 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~-~~s~~el~~~i~~~~g~~~~~-~~~~~------------~~~~~~~~~~ 291 (676)
++|+|++++.+++++. .+++||+++++ ++|+.|+++.+.+.+|.+... .+... ..........
T Consensus 540 v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 619 (660)
T 1z7e_A 540 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR 619 (660)
T ss_dssp HHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCC
T ss_pred HHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhc
Confidence 9999999999998653 57899999986 899999999999998864321 11100 0000122345
Q ss_pred ccCHHHHHh-CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 292 FLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 292 ~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
.+|++|+++ |||+|+++++++|+++++||+++.
T Consensus 620 ~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~ 653 (660)
T 1z7e_A 620 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_dssp CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred ccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence 789999975 999999999999999999998763
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=297.44 Aligned_cols=270 Identities=19% Similarity=0.196 Sum_probs=216.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|+|||||| ||||++|++.|+++ +++|++++|...... .+ ...+++++.+|+.|.+ + .++|+|
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~~----~~~~~~~~~~D~~d~~-----~--~~~d~v 67 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSRNPDQME--AI----RASGAEPLLWPGEEPS-----L--DGVTHL 67 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEESCGGGHH--HH----HHTTEEEEESSSSCCC-----C--TTCCEE
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEcChhhhh--hH----hhCCCeEEEecccccc-----c--CCCCEE
Confidence 3579999998 99999999999999 689999998653211 11 1247999999999954 3 789999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHH--cCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI--TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
||+|+..... + ..+.++++++++ .+ +++|||+||.++||.....+. +|+++..|.++|+.+
T Consensus 68 i~~a~~~~~~----~---------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~---~E~~~~~p~~~Y~~s 130 (286)
T 3ius_A 68 LISTAPDSGG----D---------PVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWV---DETTPLTPTAARGRW 130 (286)
T ss_dssp EECCCCBTTB----C---------HHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEE---CTTSCCCCCSHHHHH
T ss_pred EECCCccccc----c---------HHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCc---CCCCCCCCCCHHHHH
Confidence 9999976532 1 125789999988 45 899999999999998765443 778888899999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|..+|++++.+ .+++++++||+++||++... +..+..+..+.+.++ .+.++|+|++|+|++++.+++++
T Consensus 131 K~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~ 199 (286)
T 3ius_A 131 RVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP-------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARP 199 (286)
T ss_dssp HHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS-------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhh---cCCCEEEEeccceECCCchH-------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCC
Confidence 99999999876 58999999999999998643 123345666666554 57889999999999999999988
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCC------CCcccccCHHHHHh-CCCcccC-CHHHHHHH
Q 005818 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF------NDQRYFLDVQKLKQ-LGWYERV-TWEEGLQK 315 (676)
Q Consensus 244 ~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~k~~~-lg~~~~~-~~~~~l~~ 315 (676)
..+++||+++++++|+.|+++.+++.+|.+.+..+........ ......+|++|+++ |||+|++ +++++|++
T Consensus 200 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~ 279 (286)
T 3ius_A 200 DPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEA 279 (286)
T ss_dssp CTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHH
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHH
Confidence 8888999999999999999999999999876544433222211 12456789999986 8999999 79999999
Q ss_pred HHHH
Q 005818 316 TMKW 319 (676)
Q Consensus 316 ~~~~ 319 (676)
+++.
T Consensus 280 ~~~~ 283 (286)
T 3ius_A 280 LQAD 283 (286)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=302.35 Aligned_cols=308 Identities=18% Similarity=0.139 Sum_probs=231.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEE-EecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFI-KGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v-~~Dl~d~~~~~~~~~ 78 (676)
|..++++|+|||||||||||++|++.|+++ +++|++++|...... ...........+++++ .+|++|++.+.+++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~- 81 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI- 81 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT-
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH-
Confidence 556677899999999999999999999999 688998888542110 0000000012468888 79999999998887
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC-cCCCCCCCC-----
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED-AVVGNHEAS----- 152 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~-~~~~~~e~~----- 152 (676)
.++|+|||+|+..... .++...+++|+.++.+++++|+....+++|||+||.++|+..... ...+.+|++
T Consensus 82 -~~~d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~ 157 (342)
T 1y1p_A 82 -KGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLES 157 (342)
T ss_dssp -TTCSEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHH
T ss_pred -cCCCEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchh
Confidence 5899999999986542 467789999999999999999853337999999999998643211 001123333
Q ss_pred -----------CCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCC---ChHHHHHHHHHCCCCcee
Q 005818 153 -----------QLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 153 -----------~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~ 216 (676)
+..|.+.|+.+|..+|.+++.+++++ +++++++||+++||+...+. ..+..++..+..+..+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T 1y1p_A 158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA 237 (342)
T ss_dssp HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH
T ss_pred hhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccc
Confidence 23456789999999999999988775 68899999999999986543 277888888888887766
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcCCC-CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCH
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKGEV-GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDV 295 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~~~-~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (676)
++++ +.++|+|++|+|++++.+++++.. ++.| ++++..+|+.|+++.+.+.+|.. ...... + +.......+|+
T Consensus 238 ~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~~~~~~-~--~~~~~~~~~d~ 311 (342)
T 1y1p_A 238 LALM-PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-TFPADF-P--DQGQDLSKFDT 311 (342)
T ss_dssp HHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-CCCCCC-C--CCCCCCCEECC
T ss_pred cccC-CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-cCCCCC-C--ccccccccCCh
Confidence 6655 678999999999999999987543 4444 45667899999999999999864 211111 1 11112366799
Q ss_pred HHHHh-CCC---cccCCHHHHHHHHHHHHh
Q 005818 296 QKLKQ-LGW---YERVTWEEGLQKTMKWYI 321 (676)
Q Consensus 296 ~k~~~-lg~---~~~~~~~~~l~~~~~~~~ 321 (676)
+|+++ ||| .+..+++++|+++++|++
T Consensus 312 ~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 312 APSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred HHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 99975 776 566799999999998875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=304.28 Aligned_cols=268 Identities=17% Similarity=0.192 Sum_probs=212.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
||+|||||||||||++|+++|+++|+.| .++.+|++| +++.++++++ |+|||+|+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~--d~vih~a~~~--- 74 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGA--EEVWHIAANP--- 74 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTC--SEEEECCCCC---
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCC--CEEEECCCCC---
Confidence 5689999999999999999999999533 457799999 8899999876 9999999965
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
....+..++...+++|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+.+|..+|.
T Consensus 75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e~ 147 (313)
T 3ehe_A 75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIP-------TPEDYPTHPISLYGASKLACEA 147 (313)
T ss_dssp CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCC-------CCCCCCCCCCCHHHHHHHHHHH
Confidence 45566778889999999999999999999987 788999999998654444 6666788888999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChH-------HHHHHHHhcCcee-ccCC-----CccchhhHHHHHHHHHhcC-CCcee
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVV-NIPN-----SMTILDELLPISVEMAKRN-LSGIW 591 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~-~~~~-----~~~~v~D~a~~~~~~~~~~-~~g~y 591 (676)
+++.+.+.++++++++||+++|||. .++.++..+...+ ..++ +|+|++|+|++++.+++.. .+++|
T Consensus 148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 227 (313)
T 3ehe_A 148 LIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF 227 (313)
T ss_dssp HHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEE
T ss_pred HHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceE
Confidence 9999876678999999999999995 4566666664433 2222 8999999999999999854 44799
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccCC
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPNK 667 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~ 667 (676)
|+++++++|+.|+++.+++.+|.+..+...+... .......+..+|++|+++++|.+ .+|+++|++++..+.+
T Consensus 228 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~ 301 (313)
T 3ehe_A 228 NIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR---GWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301 (313)
T ss_dssp ECCCSCCEEHHHHHHHHHHHTTCCCEEEEC---------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred EECCCCCeeHHHHHHHHHHHhCCCCceEECCCcc---CCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999876543322111 01111224678999998877666 4999999999887654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=304.66 Aligned_cols=272 Identities=18% Similarity=0.171 Sum_probs=216.0
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCC-------ceeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGI-------PFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETH 454 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~-------~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 454 (676)
++||+|||||||||||++|+++|+++|+ .+..+.+|++|++.+.+++++.++|+|||+|+..+ ....+..+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~ 81 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG--GLFRNIKY 81 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC--CHHHHTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEECceecc--cccccccC
Confidence 3568999999999999999999999986 34567899999999999999867799999999752 23345677
Q ss_pred hhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC---CCCCCCC-chhhhHHHHHHHHHH
Q 005818 455 KPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED---KPNFTGS-FYSKTKAMVEELLKE 529 (676)
Q Consensus 455 ~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~---~~~~p~~-~Y~~sK~~~E~~~~~ 529 (676)
+...+++|+.++.+++++|++.++ ++|++||+.+|+.....| +.|++ .+..|.+ +|+.+|+.+|++++.
T Consensus 82 ~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 155 (319)
T 4b8w_A 82 NLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP------IDETMIHNGPPHNSNFGYSYAKRMIDVQNRA 155 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSS------BCGGGGGBSCCCSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCC------ccccccccCCCCCCcchHHHHHHHHHHHHHH
Confidence 888999999999999999999998 577889999997655444 33333 1555555 599999999999999
Q ss_pred ccCeEEEEeeecccCCCCChHH------------HHHH----HHhcCceeccCC-----CccchhhHHHHHHHHHhcCC-
Q 005818 530 YDNVCTLRVRMPISSDLNNPRN------------FITK----ISRYNKVVNIPN-----SMTILDELLPISVEMAKRNL- 587 (676)
Q Consensus 530 ~~~~~~l~~~~~r~~~~~g~~~------------~~~~----~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~- 587 (676)
+.+..+++++++|++++|||.. ++.+ +..+......++ +|+|++|+|++++.+++++.
T Consensus 156 ~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 235 (319)
T 4b8w_A 156 YFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE 235 (319)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC
T ss_pred HHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc
Confidence 8767799999999999999962 4555 455555443332 89999999999999998742
Q ss_pred --CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhh
Q 005818 588 --SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVF 663 (676)
Q Consensus 588 --~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~ 663 (676)
+++||+++++++|+.|+++.+.+.+|.+..+...+.. ........+|++|+++.++|. .+|+++|++++.
T Consensus 236 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 309 (319)
T 4b8w_A 236 VEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK------SDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCA 309 (319)
T ss_dssp SSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS------CCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHH
T ss_pred CCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC------CcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 4599999999999999999999999987655332211 111124568999999977655 489999999987
Q ss_pred ccCC
Q 005818 664 EPNK 667 (676)
Q Consensus 664 ~~~~ 667 (676)
.+.+
T Consensus 310 ~~~~ 313 (319)
T 4b8w_A 310 WFTD 313 (319)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7655
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-36 Score=307.96 Aligned_cols=272 Identities=18% Similarity=0.208 Sum_probs=211.2
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcC--Cc------------------------eeeccccCCChHHHHHHhhccCCCE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKG--IP------------------------FEYGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g--~~------------------------v~~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
..+|+|||||||||||++|+++|+++| ++ +.++.+|++|++.+.+++++.++|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 345899999999999999999999999 32 3456899999999999999866699
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|||+|+.. ....+..++...+++|+.++.+++++|++.+++ +|++||..+|+..... ...+|+.+..|.+
T Consensus 102 Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~------~~~~E~~~~~p~~ 172 (346)
T 4egb_A 102 IVNFAAES---HVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKT------GRFTEETPLAPNS 172 (346)
T ss_dssp EEECCCCC------------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSS------CCBCTTSCCCCCS
T ss_pred EEECCccc---chhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcC------CCcCCCCCCCCCC
Confidence 99999976 445566778889999999999999999999974 8899999999765321 1256667788889
Q ss_pred chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISVE 581 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~ 581 (676)
.|+.+|+.+|++++.+.+..+++++++|++++|||. .++..+..+......++ +|+|++|+|++++.
T Consensus 173 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 252 (346)
T 4egb_A 173 PYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHH
Confidence 999999999999999876679999999999999985 34555666665433332 89999999999999
Q ss_pred HHhcCCC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-CC-CHHHHH
Q 005818 582 MAKRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-LL-SIKESL 658 (676)
Q Consensus 582 ~~~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~~-~~~~~l 658 (676)
+++++.. ++||+++++++|+.|+++.+.+.+|.+.......... ........+|++|+++.++| +. +|+++|
T Consensus 253 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l 327 (346)
T 4egb_A 253 VLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDR-----LGHDRRYAINAEKMKNEFDWEPKYTFEQGL 327 (346)
T ss_dssp HHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC-------CCCSCCCBCCHHHHHHHCCCCCCCHHHHH
T ss_pred HHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCC-----CCCcceeeccHHHHHHHcCCCCCCCHHHHH
Confidence 9988754 5999999999999999999999999875432211110 11112456899999875555 43 899999
Q ss_pred HHhhhccCC
Q 005818 659 IKNVFEPNK 667 (676)
Q Consensus 659 ~~~~~~~~~ 667 (676)
++++..+.+
T Consensus 328 ~~~~~~~~~ 336 (346)
T 4egb_A 328 QETVQWYEK 336 (346)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999877655
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=304.18 Aligned_cols=269 Identities=19% Similarity=0.205 Sum_probs=213.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|||||||||||||++|+++|+++|++| .++.+|+.|.+ +.+++++ |+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~---d~vih~A~~~--- 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG---DVVFHFAANP--- 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC---SEEEECCSSC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC---CEEEECCCCC---
Confidence 589999999999999999999999876 44678999988 7777765 9999999966
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
....+..++...+++|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+.||..+|+
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~-------~~e~~~~~p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIP-------TPEEEPYKPISVYGAAKAAGEV 146 (312)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCC-------CCCCCCCCCCChHHHHHHHHHH
Confidence 55667788889999999999999999999987 788999999998655444 5666788888999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChH-------HHHHHHHhcCcee-ccCC-----CccchhhHHHHHHHHHhc---C--C
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVV-NIPN-----SMTILDELLPISVEMAKR---N--L 587 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~-~~~~-----~~~~v~D~a~~~~~~~~~---~--~ 587 (676)
+++.+.+..+++++++||+++|||. .++.++..+...+ ..++ +|+|++|+|++++.++++ + .
T Consensus 147 ~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 226 (312)
T 3ko8_A 147 MCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226 (312)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence 9999876679999999999999995 4566666664433 2222 899999999999999987 2 3
Q ss_pred CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-C-CCHHHHHHHhhhcc
Q 005818 588 SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-L-LSIKESLIKNVFEP 665 (676)
Q Consensus 588 ~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~-~~~~~~l~~~~~~~ 665 (676)
+++||+++++.+|+.|+++.+.+.+|.+..+..++................+|++|+++.++| + .+++++|++++..+
T Consensus 227 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~ 306 (312)
T 3ko8_A 227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDL 306 (312)
T ss_dssp EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 469999999999999999999999998766654443221111122223567899999665555 4 38999999998776
Q ss_pred CC
Q 005818 666 NK 667 (676)
Q Consensus 666 ~~ 667 (676)
.+
T Consensus 307 ~~ 308 (312)
T 3ko8_A 307 AK 308 (312)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=299.80 Aligned_cols=263 Identities=16% Similarity=0.155 Sum_probs=215.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNV 448 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 448 (676)
||+|+|||||||||++|++.|+++|++| .++.+|++ .+.+.++++++ |+|||+|+.. ..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~--d~Vih~a~~~---~~ 75 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDV--DAVVHLAATR---GS 75 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTC--SEEEECCCCC---CS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCC--CEEEEccccC---CC
Confidence 5799999999999999999999999866 34578999 99999999966 9999999976 22
Q ss_pred chhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHH
Q 005818 449 DWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELL 527 (676)
Q Consensus 449 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~ 527 (676)
. ++...+++|+.++.+++++|++.+++ +|++||+.+|+.....| .+|+.+..|.+.|+.+|+.+|+++
T Consensus 76 ~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~~ 144 (311)
T 3m2p_A 76 Q----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLP-------WNEKELPLPDLMYGVSKLACEHIG 144 (311)
T ss_dssp S----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCS-------BCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred C----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC-------CCCCCCCCCCchhHHHHHHHHHHH
Confidence 2 67788999999999999999999985 88999999998654444 566668888899999999999999
Q ss_pred HHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcC-CCceeEc
Q 005818 528 KEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRN-LSGIWNF 593 (676)
Q Consensus 528 ~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~-~~g~yn~ 593 (676)
+.+.+..+++++++|++++|||. .++..+..+......++ +|+|++|+|++++.+++++ .+++||+
T Consensus 145 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i 224 (311)
T 3m2p_A 145 NIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNI 224 (311)
T ss_dssp HHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEe
Confidence 99876679999999999999984 24455555555433322 8999999999999999987 6689999
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-C-CHHHHHHHhhhccCCC
Q 005818 594 TNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-L-SIKESLIKNVFEPNKK 668 (676)
Q Consensus 594 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~-~~~~~l~~~~~~~~~~ 668 (676)
++++.+|+.|+++.+++.+|.+..+...+.. .........+|++|+++.++|. . +|+++|++++..+.+.
T Consensus 225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 296 (311)
T 3m2p_A 225 GSGDALTNYEVANTINNAFGNKDNLLVKNPN-----ANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL 296 (311)
T ss_dssp CCSCEECHHHHHHHHHHHTTCTTCEEECSSS-----BCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred CCCCcccHHHHHHHHHHHhCCCCcceecCCC-----CCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence 9999999999999999999987665443321 1111226688999999855554 4 9999999999887764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=296.28 Aligned_cols=300 Identities=13% Similarity=0.107 Sum_probs=230.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCC---CcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC-CC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYP---EYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK-ID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~---~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~-~d 83 (676)
|+|||||||||||++|++.|+++|. .++|++++|...... ....+++++.+|+.|++.+.+++...+ +|
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d 74 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPLTDVT 74 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence 6899999999999999999999831 089999998653221 124578999999999999999984433 99
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEE-------EEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFI-------HVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v-------~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+|+... .++...++.|+.++.+++++|++.+ .+++|| |+||.++||...... .+.+|+++..
T Consensus 75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~-~~~~E~~~~~ 148 (364)
T 2v6g_A 75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHD-PPYTEDLPRL 148 (364)
T ss_dssp EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCC-SSBCTTSCCC
T ss_pred EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCC-CCCCccccCC
Confidence 9999999753 4577899999999999999999872 388998 899999998753111 1235666555
Q ss_pred C-CChhHHHHHHHHHHHHHHHHHcC-CCEEEEeeCCccCCCCCCC-C-hHHH-HHHHH--HCCCCceeecCC---CceEe
Q 005818 156 P-TNPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQFPE-K-LIPK-FILLA--MKGKPLPIHGDG---SNVRS 225 (676)
Q Consensus 156 p-~~~Y~~sK~~~E~~~~~~~~~~~-l~~~ilR~~~i~G~~~~~~-~-~~~~-~~~~~--~~~~~~~~~~~~---~~~~~ 225 (676)
| .+.| ..+|+++++++++++ ++++++||+.||||+.... . +++. +.+.+ ..+.++.+++++ ....+
T Consensus 149 ~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 224 (364)
T 2v6g_A 149 KYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSD 224 (364)
T ss_dssp SSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBC
T ss_pred ccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCC
Confidence 4 6678 458999998887777 9999999999999987431 2 3333 33434 357777777776 34578
Q ss_pred eeeHHHHHHHHHHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceeee-------------------c
Q 005818 226 YLYCEDVAEAFDTILHKGE-VGHVYNIGTKKERRVIDVATDICKLFSLNPDT---QIKFV-------------------E 282 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~-------------------~ 282 (676)
++|++|+|++++.+++++. .+++||+++++++|+.|+++.+++.+|.+... .++.. .
T Consensus 225 ~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 304 (364)
T 2v6g_A 225 CSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENG 304 (364)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhC
Confidence 8899999999999998764 57799999999999999999999999976432 11110 0
Q ss_pred CCCCC--C------------cc-cccCHHHHHhCCCcccCCHHHHHHHHHHHHhhCC
Q 005818 283 NRPFN--D------------QR-YFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 283 ~~~~~--~------------~~-~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
..+.. . .. +.+|++|+++|||+|.++++++|+++++||++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 305 LTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp CCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred CCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 01110 0 23 5789999988999999999999999999998753
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=305.78 Aligned_cols=272 Identities=15% Similarity=0.145 Sum_probs=217.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~ 433 (676)
++|+|||||||||||++|+++|+++|++| .++.+|++|++.+.++++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV-- 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC--
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC--
Confidence 35799999999999999999999999765 34678999999999999976
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
|+|||+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|
T Consensus 102 d~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~p 171 (351)
T 3ruf_A 102 DHVLHQAALG---SVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALP-------KVEENIGNP 171 (351)
T ss_dssp SEEEECCCCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCC
T ss_pred CEEEECCccC---CcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCC-------CccCCCCCC
Confidence 9999999976 55666778888999999999999999999997 788999999997655444 666777888
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCC-----CccchhhH
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTILDEL 575 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~v~D~ 575 (676)
.+.|+.+|+.+|++++.+.+..+++++++|++++|||. .++..+..+......++ +|+|++|+
T Consensus 172 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 172 LSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence 89999999999999998876679999999999999985 34556666665443332 89999999
Q ss_pred HHHHHHHHhcC---CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-
Q 005818 576 LPISVEMAKRN---LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL- 651 (676)
Q Consensus 576 a~~~~~~~~~~---~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~- 651 (676)
|++++.+++++ .+++||+++++.+|+.|+++.+++.+|........+.... ........+..+|++|+++.++|.
T Consensus 252 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~~lG~~p 330 (351)
T 3ruf_A 252 IQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYR-EFRSGDVRHSQADVTKAIDLLKYRP 330 (351)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEE-CCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccccc-CCCCCccceeeeCHHHHHHHhCCCC
Confidence 99999999872 4579999999999999999999999997433322221100 101111125678999998855554
Q ss_pred -CCHHHHHHHhhhccCC
Q 005818 652 -LSIKESLIKNVFEPNK 667 (676)
Q Consensus 652 -~~~~~~l~~~~~~~~~ 667 (676)
.+|+++|++++..+.+
T Consensus 331 ~~~~~~~l~~~~~~~~~ 347 (351)
T 3ruf_A 331 NIKIREGLRLSMPWYVR 347 (351)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 3999999999876644
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=296.47 Aligned_cols=303 Identities=17% Similarity=0.233 Sum_probs=214.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCC-CCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNL-NPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
++++||||||+||||++|++.|+++ +++|+++.|..... ....+ .......+++++.+|++|++++.+++ .++|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 79 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI--KGCT 79 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH--TTCS
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH--cCCC
Confidence 4579999999999999999999999 67888777754211 00000 00000135889999999999999998 7899
Q ss_pred EEEEccccCCcCCcCCChH-HHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc-ccCCCCCCcCCCCCCCCCC-------
Q 005818 84 TIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE-VYGETDEDAVVGNHEASQL------- 154 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~------- 154 (676)
+|||+|+.... ...++. ..+++|+.|+.+++++|++.+.+++|||+||.+ +|+...... ..+|+.+.
T Consensus 80 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~--~~~E~~~~~~~~~~~ 155 (337)
T 2c29_D 80 GVFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRA 155 (337)
T ss_dssp EEEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCS--EECTTCCCCHHHHHH
T ss_pred EEEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCc--ccCcccCCchhhhcc
Confidence 99999987532 223343 588999999999999999876578999999987 454432211 11333221
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHH--HHCCCCceeecCCCceEeeeeHH
Q 005818 155 --LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL--AMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 155 --~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
.|.++|+.+|..+|.+++++++.+|++++++||++||||+.... +...+... ...+... .++.+ ....|+|++
T Consensus 156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~ 232 (337)
T 2c29_D 156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS-MPPSLITALSPITGNEA-HYSII-RQGQFVHLD 232 (337)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS-CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC-CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHH
Confidence 14457999999999999998877899999999999999986432 21111111 1233322 12222 234599999
Q ss_pred HHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCH
Q 005818 231 DVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSL-NPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTW 309 (676)
Q Consensus 231 D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~ 309 (676)
|+|++++.+++++..++.|++++ ...|+.|+++.+.+.++. ..+ ..+ ...+.......+|++|+++|||+|++++
T Consensus 233 Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~-~~~~~~~~~~~~d~~k~~~lG~~p~~~l 308 (337)
T 2c29_D 233 DLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIP--TEF-KGVDENLKSVCFSSKKLTDLGFEFKYSL 308 (337)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCC--SCC-TTCCTTCCCCEECCHHHHHHTCCCCCCH
T ss_pred HHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCC--CCC-CcccCCCccccccHHHHHHcCCCcCCCH
Confidence 99999999998766667887654 568999999999998742 111 111 1111223456789999988999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005818 310 EEGLQKTMKWYISN 323 (676)
Q Consensus 310 ~~~l~~~~~~~~~~ 323 (676)
+++|+++++|+++.
T Consensus 309 ~e~l~~~~~~~~~~ 322 (337)
T 2c29_D 309 EDMFTGAVDTCRAK 322 (337)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999875
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=292.30 Aligned_cols=303 Identities=20% Similarity=0.235 Sum_probs=210.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC-CCcc-ccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-LDYC-SNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r-~~~~-~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+|+|||||||||||++|++.|+++ +++|+++.| .... .....+.. .....+++++.+|++|++++.+++ .++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 76 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI--EGCV 76 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH--TTCS
T ss_pred CCEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH--cCCC
Confidence 378999999999999999999999 678888777 3211 00000000 000125788999999999999999 6899
Q ss_pred EEEEccccCCcCCcCCCh-HHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC--------
Q 005818 84 TIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL-------- 154 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------- 154 (676)
+|||+|+... ....++ ...+++|+.|+.+++++|++.+.+++|||+||.+++....... ...+|+.+.
T Consensus 77 ~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~-~~~~e~~~~~~~~~~~~ 153 (322)
T 2p4h_X 77 GIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDK-DVLDESDWSDVDLLRSV 153 (322)
T ss_dssp EEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCC-SEECTTCCCCHHHHHHH
T ss_pred EEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCC-eecCCccccchhhhccc
Confidence 9999997542 222232 3588999999999999999872388999999987543222110 111333221
Q ss_pred CCCC-hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTN-PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~-~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
.|.+ +|+.+|..+|.+++++++.+|++++++||++||||+.... ..+..+. ....+....+ +. ...+|+|++|
T Consensus 154 ~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~-~~~~g~~~~~-~~--~~~~~i~v~D 229 (322)
T 2p4h_X 154 KPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKAL-VLVLGKKEQI-GV--TRFHMVHVDD 229 (322)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHT-HHHHSCGGGC-CE--EEEEEEEHHH
T ss_pred CcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHH-HHHhCCCccC-cC--CCcCEEEHHH
Confidence 2333 6999999999999999887899999999999999976432 1121121 2233433322 22 3348999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceee-ecCCCCCCcccccCHHHHHhCCCcccCCHH
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKF-VENRPFNDQRYFLDVQKLKQLGWYERVTWE 310 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~ 310 (676)
+|++++.+++++...+.|| ++++++|+.|+++.+.+.++... ..... ....+ ......+|++|+++|||+|+++++
T Consensus 230 va~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~-~~~~~~~d~~k~~~lG~~p~~~~~ 306 (322)
T 2p4h_X 230 VARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQ-ILTVDELKEIK-GARLPDLNTKKLVDAGFDFKYTIE 306 (322)
T ss_dssp HHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSC-CCCTTTTTTCC-CEECCEECCHHHHHTTCCCCCCHH
T ss_pred HHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCC-CCCCccccCCC-CCcceecccHHHHHhCCccCCCHH
Confidence 9999999998765555698 56788999999999998774211 10000 01111 113467899999889999999999
Q ss_pred HHHHHHHHHHhhC
Q 005818 311 EGLQKTMKWYISN 323 (676)
Q Consensus 311 ~~l~~~~~~~~~~ 323 (676)
++|+++++|++++
T Consensus 307 ~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 307 DMFDDAIQCCKEK 319 (322)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=305.81 Aligned_cols=275 Identities=13% Similarity=0.145 Sum_probs=214.4
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHc-CCce-------------------eeccccCC-ChHHHHHHhhccCCCEEEECc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------EYGKGRLE-NRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~Dl~-d~~~~~~~~~~~~~d~Vih~a 440 (676)
++||+|+|||||||||++|+++|+++ |++| .++.+|++ |.+.+.++++++ |+|||+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~--d~Vih~A 99 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKC--DVILPLV 99 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHC--SEEEECB
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccC--CEEEEcC
Confidence 45689999999999999999999999 8754 66789999 999999999987 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC------CCCC
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN------FTGS 514 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~------~p~~ 514 (676)
+.. ....+..++...+++|+.++.+++++|++.+.++|++||+.||+.....+ +.+++.+. .|.+
T Consensus 100 ~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~------~~e~~~~~~~~p~~~p~~ 170 (372)
T 3slg_A 100 AIA---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQ------FDPDASALTYGPINKPRW 170 (372)
T ss_dssp CCC---CHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSS------BCTTTCCEEECCTTCTTH
T ss_pred ccc---cHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCC------CCccccccccCCCCCCCC
Confidence 977 45556678888999999999999999999988889999999998654433 34444321 5667
Q ss_pred chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCceeccCC-----Cccchh
Q 005818 515 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIPN-----SMTILD 573 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~~-----~~~~v~ 573 (676)
.|+.+|+.+|++++.+.+. +++++++||+++|||. .++..+..+......++ +|+|++
T Consensus 171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 249 (372)
T 3slg_A 171 IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD 249 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence 8999999999999998666 9999999999999985 24555666665443332 899999
Q ss_pred hHHHHHHHHHhcC----CCceeEccCC-CcccHHHHHHHHHhhcCCCCcccccchH---------hhhhHhccCCCcccc
Q 005818 574 ELLPISVEMAKRN----LSGIWNFTNP-GVVSHNEILEMYKAYIDPGFKWTNFTLE---------EQAKVIVAPRSNNEL 639 (676)
Q Consensus 574 D~a~~~~~~~~~~----~~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~l 639 (676)
|+|++++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.+..+...+.. ..............+
T Consensus 250 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (372)
T 3slg_A 250 DGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVP 329 (372)
T ss_dssp HHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCB
T ss_pred HHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeec
Confidence 9999999999876 3579999995 8999999999999999976554322210 000000011125678
Q ss_pred ChhHHHhhCCCC--CCHHHHHHHhhhccCCC
Q 005818 640 DASKLKKEFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 640 d~~k~~~~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
|++|+++.++|. .+|+++|++++..+.+.
T Consensus 330 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 330 KIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp CCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 999998855554 38999999998877653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=292.07 Aligned_cols=268 Identities=21% Similarity=0.186 Sum_probs=212.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec---cccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHh
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG---KGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIR 460 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~---~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~ 460 (676)
.|+|||||||||||++|+++|+++|++|..+ .+|++|++.+.++++..++|+|||+||.. ....+..++...++
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~~ 88 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAYK 88 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccC---CHHHHhcCHHHHHH
Confidence 3799999999999999999999999998654 58999999999999865569999999976 44445677888999
Q ss_pred hhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeee
Q 005818 461 TNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540 (676)
Q Consensus 461 ~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~ 540 (676)
+|+.++.+++++|++.++++|++||..+|+.....+ .+|+.+..|.+.|+.+|+.+|++++.+.. ++++
T Consensus 89 ~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~ 157 (292)
T 1vl0_A 89 INAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP-------ITEFDEVNPQSAYGKTKLEGENFVKALNP----KYYI 157 (292)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC-------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS----SEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCC-------CCCCCCCCCccHHHHHHHHHHHHHHhhCC----CeEE
Confidence 999999999999999888999999999997654333 55666777889999999999999988753 4788
Q ss_pred cccCCCCChH-----HHHHHHHhcCceeccC---CCccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhc
Q 005818 541 PISSDLNNPR-----NFITKISRYNKVVNIP---NSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYI 612 (676)
Q Consensus 541 ~r~~~~~g~~-----~~~~~~~~~~~~~~~~---~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~ 612 (676)
+|++++|||. .++..+..+......+ .+|+|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+
T Consensus 158 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~ 237 (292)
T 1vl0_A 158 VRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLT 237 (292)
T ss_dssp EEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred EeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcCCCcEEEecCCCCccHHHHHHHHHHHh
Confidence 8999999873 2333344444433222 2899999999999999987766899999999999999999999999
Q ss_pred CCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccC
Q 005818 613 DPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPN 666 (676)
Q Consensus 613 g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~ 666 (676)
|.+..+.+++....... ........+|++|++++++|. ++|+++|++++..++
T Consensus 238 g~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 238 GIDVKVTPCTTEEFPRP-AKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 291 (292)
T ss_dssp CCCCEEEEECSTTSCCS-SCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred CCCCceeeccccccCcc-cCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhc
Confidence 98765544443221110 011125678999998866655 699999999987654
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=298.38 Aligned_cols=304 Identities=19% Similarity=0.210 Sum_probs=210.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+|+|||||||||||++|++.|+++ +++|+++.|...... ...+.......+++++.+|++|++++.+++ .++|+|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~V 84 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI--AGCDFV 84 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH--TTCSEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH--cCCCEE
Confidence 579999999999999999999999 677877766532110 000000001246889999999999999998 689999
Q ss_pred EEccccCCcCCcCCChH-HHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc-ccCCCCCCcCCCCCCCCC--------CC
Q 005818 86 MHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE-VYGETDEDAVVGNHEASQ--------LL 155 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~--------~~ 155 (676)
||+|+.... ...++. +.+++|+.|+.+++++|++.+.+++|||+||.+ +|+..........+|+.+ ..
T Consensus 85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 162 (338)
T 2rh8_A 85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAK 162 (338)
T ss_dssp EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------
T ss_pred EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccC
Confidence 999987532 222332 488999999999999999874489999999977 443221110001233321 11
Q ss_pred C-CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecC------CCceEee
Q 005818 156 P-TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGD------GSNVRSY 226 (676)
Q Consensus 156 p-~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 226 (676)
| .++|+.+|..+|.+++++.+++|++++++||++||||+.... ..+..+. ....+.... ++. +...++|
T Consensus 163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~ 240 (338)
T 2rh8_A 163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFL-INGMKGMQMLSGSVSI 240 (338)
T ss_dssp CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHH-HHHHHHHHHHHSSEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-cccccccccccCcccE
Confidence 2 226999999999999998877899999999999999986432 1222221 123333221 111 1123489
Q ss_pred eeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceeeecCCCCCCcccccCHHHHHhCCCcc
Q 005818 227 LYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSL-NPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYE 305 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~ 305 (676)
+|++|+|++++.+++++..++.|++++ ..+|+.|+++.+.+.++. ..+. .+. ..+. .....+|++|+++|||+|
T Consensus 241 i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~--~~~-~~~~-~~~~~~d~~k~~~lG~~p 315 (338)
T 2rh8_A 241 AHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPT--DFG-DFPP-KSKLIISSEKLVKEGFSF 315 (338)
T ss_dssp EEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCC--CCT-TSCS-SCSCCCCCHHHHHHTCCC
T ss_pred EEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCC--CCC-CCCc-CcceeechHHHHHhCCCC
Confidence 999999999999998766667898875 468999999999988753 2111 111 1111 123678999998899999
Q ss_pred cCCHHHHHHHHHHHHhhC
Q 005818 306 RVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~ 323 (676)
+++++++|+++++|++++
T Consensus 316 ~~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 316 KYGIEEIYDESVEYFKAK 333 (338)
T ss_dssp SCCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHc
Confidence 999999999999999875
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=300.44 Aligned_cols=270 Identities=13% Similarity=0.107 Sum_probs=214.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++|+|+||||+||||++|+++|+++|++| .++.+|++|++.+.++++..++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 34799999999999999999999999865 34578999999999999865669999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
|+||.. .......++...+++|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|
T Consensus 84 h~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~e~~~~~~~~~Y 153 (341)
T 3enk_A 84 HFAALK---AVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSP-------IDETFPLSATNPY 153 (341)
T ss_dssp ECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSS-------BCTTSCCBCSSHH
T ss_pred ECcccc---ccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCC-------CCCCCCCCCCChh
Confidence 999976 44555677788899999999999999999986 788999999997655444 6666777888999
Q ss_pred hhhHHHHHHHHHHccCeEE-EEeeecccCCCCChH-----------------HHHHHHHhcC-cee-ccC----------
Q 005818 517 SKTKAMVEELLKEYDNVCT-LRVRMPISSDLNNPR-----------------NFITKISRYN-KVV-NIP---------- 566 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~-l~~~~~r~~~~~g~~-----------------~~~~~~~~~~-~~~-~~~---------- 566 (676)
+.||..+|++++.+.+..+ ++++++||+++|||. .++.+...+. ..+ .++
T Consensus 154 ~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 233 (341)
T 3enk_A 154 GQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG 233 (341)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSC
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCe
Confidence 9999999999998755554 999999999999983 1344444432 222 111
Q ss_pred -CCccchhhHHHHHHHHHhc----CCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccCh
Q 005818 567 -NSMTILDELLPISVEMAKR----NLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 567 -~~~~~v~D~a~~~~~~~~~----~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
.+|+|++|+|++++.++++ ..+++||+++++++|+.|+++.+.+.+|.+.++...+.. ........+|+
T Consensus 234 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~ 307 (341)
T 3enk_A 234 VRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARR------PGDVAECYANP 307 (341)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCC------TTCCSEECBCC
T ss_pred eEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCC------CCCccccccCH
Confidence 1899999999999999986 346799999999999999999999999987665443321 11112557899
Q ss_pred hHHHhhCCCC--CCHHHHHHHhhhccCCC
Q 005818 642 SKLKKEFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 642 ~k~~~~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
+|+++.++|. .+|+++|++++..+.+.
T Consensus 308 ~k~~~~lG~~p~~~l~~~l~~~~~~~~~~ 336 (341)
T 3enk_A 308 AAAAETIGWKAERDLERMCADHWRWQENN 336 (341)
T ss_dssp HHHHHHHCCCCCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 9998755554 59999999999877653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=296.30 Aligned_cols=269 Identities=16% Similarity=0.190 Sum_probs=211.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------eccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPE 457 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 457 (676)
|+|+|||||||||++|+++|+ +|++|. .+.+|+.|++.+.+++++.++|+|||+|+.. ....+..++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~~~~~~~~~~~ 76 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPEL 76 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccC---CHhhhhcCHHH
Confidence 589999999999999999999 899884 3458999999999999985669999999976 44445677888
Q ss_pred HHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEE
Q 005818 458 TIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLR 537 (676)
Q Consensus 458 ~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~ 537 (676)
.+++|+.++.+++++|++.++++|++||..+|+.....+ ..|+.+..|.+.|+.+|..+|++++.+.. +
T Consensus 77 ~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~ 145 (299)
T 1n2s_A 77 AQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-------WQETDATSPLNVYGKTKLAGEKALQDNCP----K 145 (299)
T ss_dssp HHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC-------BCTTSCCCCSSHHHHHHHHHHHHHHHHCS----S
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCC-------CCCCCCCCCccHHHHHHHHHHHHHHHhCC----C
Confidence 999999999999999999989999999999997654333 55666778889999999999999988754 7
Q ss_pred eeecccCCCCChH------HHHHHHHhcCceeccCC---CccchhhHHHHHHHHHhcC-----CCceeEccCCCcccHHH
Q 005818 538 VRMPISSDLNNPR------NFITKISRYNKVVNIPN---SMTILDELLPISVEMAKRN-----LSGIWNFTNPGVVSHNE 603 (676)
Q Consensus 538 ~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~-----~~g~yn~~~~~~~s~~e 603 (676)
++++|++++|||. .++..+..+......++ +|+|++|+|++++.+++++ .+++||+++++.+|+.|
T Consensus 146 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 225 (299)
T 1n2s_A 146 HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD 225 (299)
T ss_dssp EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred eEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHH
Confidence 8999999999984 23444445554333333 8999999999999999875 26799999999999999
Q ss_pred HHHHHHhhcCCCC------cccccchHhhhhHhccCCCccccChhHHHhhCCC-CCCHHHHHHHhhhccCCCC
Q 005818 604 ILEMYKAYIDPGF------KWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-LLSIKESLIKNVFEPNKKP 669 (676)
Q Consensus 604 ~~~~i~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~~~~~~~l~~~~~~~~~~~ 669 (676)
+++.+.+.+|.+. .+.+++....... .....+..+|++|+++.++| +.+|+++|++++..+.++.
T Consensus 226 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~~~ 297 (299)
T 1n2s_A 226 YAALVFDEARKAGITLALTELNAVPTSAYPTP-ASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTT 297 (299)
T ss_dssp HHHHHHHHHHHHTCCCCCCEEEEECSTTSCCS-SCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCCccccccccccccccccccCc-CCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999998652 2222222111100 11112568899999885554 4689999999998776643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=298.27 Aligned_cols=263 Identities=15% Similarity=0.157 Sum_probs=211.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHH--cCCce-------------------------------eeccccCCChHHHHHH-h
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEK--KGIPF-------------------------------EYGKGRLENRSQLLAD-I 428 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~--~g~~v-------------------------------~~~~~Dl~d~~~~~~~-~ 428 (676)
.+|+||||||+||||++|+++|++ +|++| .++.+|++|++.++++ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 457999999999999999999999 88866 2356899999999988 5
Q ss_pred hccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 429 QNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 429 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
.+ +|+|||+||.. ..+..++...+++|+.++.+++++|++.++++|++||+.+|+.... + .+|+.
T Consensus 89 ~~--~D~vih~A~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~-------~~E~~ 153 (362)
T 3sxp_A 89 LH--FDYLFHQAAVS-----DTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-P-------NVVGK 153 (362)
T ss_dssp SC--CSEEEECCCCC-----GGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-S-------BCTTS
T ss_pred cC--CCEEEECCccC-----CccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-C-------CCCCC
Confidence 54 59999999955 2345778899999999999999999999999999999999976533 3 55666
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCC-----Cccc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTI 571 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~ 571 (676)
+..|.+.|+.||..+|++++.+.+. ++++++|++++|||. .++..+..+......++ +|+|
T Consensus 154 ~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 231 (362)
T 3sxp_A 154 NESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVY 231 (362)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEE
Confidence 7888899999999999999998765 889999999999986 23445555555433222 8999
Q ss_pred hhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-
Q 005818 572 LDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE- 650 (676)
Q Consensus 572 v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~- 650 (676)
++|+|++++.+++++..|+||+++++++|+.|+++.+++.+| +..+...+... ........+|++|+++.++|
T Consensus 232 v~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~ 305 (362)
T 3sxp_A 232 IEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY-----AFFQKHTQAHIEPTILDLDYT 305 (362)
T ss_dssp HHHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC------------CCCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC-----cCcccceecCHHHHHHHhCCC
Confidence 999999999999988778999999999999999999999999 66554444321 11112567899999665554
Q ss_pred C-CCHHHHHHHhhhccCCC
Q 005818 651 L-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 651 ~-~~~~~~l~~~~~~~~~~ 668 (676)
+ .+|+++|++++..+.+.
T Consensus 306 p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 306 PLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp CCCCHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 4 39999999998877653
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=287.28 Aligned_cols=280 Identities=14% Similarity=0.069 Sum_probs=214.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||||||||||||++|++.|+++ |++|++++|.+.. . .+..| +.....+ .++|+|||
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~------------~---~~~~~----~~~~~~l--~~~d~vih 57 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGP------------G---RITWD----ELAASGL--PSCDAAVN 57 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCT------------T---EEEHH----HHHHHCC--CSCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCc------------C---eeecc----hhhHhhc--cCCCEEEE
Confidence 68999999999999999999999 6888888885311 0 12222 2223334 68999999
Q ss_pred ccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 88 FAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 88 ~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
+|+..... .+......+.+.|+.+|.+|+++++..+ +..+||++||.++||.....+. +|+++..|.+.|+.
T Consensus 58 la~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~---~E~~p~~~~~~~~~ 134 (298)
T 4b4o_A 58 LAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEY---DEDSPGGDFDFFSN 134 (298)
T ss_dssp CCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCB---CTTCCCSCSSHHHH
T ss_pred eccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcc---cccCCccccchhHH
Confidence 99864322 1222345678899999999999998876 3456999999999998876654 77788888888988
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
.+...|.... ....+++++++|++.||||+. ..+..+......+.. ..+++++++++|||++|+++++..++++
T Consensus 135 ~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~---~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~ 208 (298)
T 4b4o_A 135 LVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG---GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEA 208 (298)
T ss_dssp HHHHHHHHHC--CSSSSSEEEEEEECEEECTTS---HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--hhccCCceeeeeeeeEEcCCC---CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhC
Confidence 8888876543 345689999999999999976 456667766666664 4558999999999999999999999999
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCC--------CCCCcccccCHHHHHhCCCcccC-CHHHHH
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR--------PFNDQRYFLDVQKLKQLGWYERV-TWEEGL 313 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~lg~~~~~-~~~~~l 313 (676)
+...++||+++++++|+.|+++.+++.+|++....++....+ ........++++|++++||++++ +++++|
T Consensus 209 ~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al 288 (298)
T 4b4o_A 209 NHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAAL 288 (298)
T ss_dssp TTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHH
T ss_pred CCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHH
Confidence 888889999999999999999999999998653322110000 00012234677899999999997 799999
Q ss_pred HHHHHH
Q 005818 314 QKTMKW 319 (676)
Q Consensus 314 ~~~~~~ 319 (676)
+++++.
T Consensus 289 ~~l~~~ 294 (298)
T 4b4o_A 289 KEIAEN 294 (298)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998864
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=300.92 Aligned_cols=264 Identities=16% Similarity=0.173 Sum_probs=208.4
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCce------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCc
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPF------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNV 448 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 448 (676)
..++|+|||||||||||++|++.|+++|++| .++.+|++|.+.+.++++++ |+|||+|+.. ..
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~A~~~---~~ 90 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGV--SAVLHLGAFM---SW 90 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTC--SEEEECCCCC---CS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCC--CEEEECCccc---Cc
Confidence 3455789999999999999999999999877 34578999999999999976 9999999966 22
Q ss_pred chhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecC--CCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 449 DWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYD--AKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 449 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~--~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
. ..+....+++|+.++.+++++|++.++ ++|++||+.||+.. ...| ..|+.+..|.+.|+.+|+.+|+
T Consensus 91 ~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~E~ 161 (347)
T 4id9_A 91 A--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLP-------VTEDHPLCPNSPYGLTKLLGEE 161 (347)
T ss_dssp S--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred c--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCC-------cCCCCCCCCCChHHHHHHHHHH
Confidence 2 223368899999999999999999987 78899999999762 2223 5666677888999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCC-------------ChH---------------H----HHHHHHhcCceecc-----CCC
Q 005818 526 LLKEYDNVCTLRVRMPISSDLN-------------NPR---------------N----FITKISRYNKVVNI-----PNS 568 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~-------------g~~---------------~----~~~~~~~~~~~~~~-----~~~ 568 (676)
+++.+.+..+++++++|++++| ||. . ++..+..+...... ..+
T Consensus 162 ~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 241 (347)
T 4id9_A 162 LVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRP 241 (347)
T ss_dssp HHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCB
T ss_pred HHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccC
Confidence 9998876679999999999999 885 1 23333344432222 227
Q ss_pred c----cchhhHHHHHHHHHhcCC--CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChh
Q 005818 569 M----TILDELLPISVEMAKRNL--SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642 (676)
Q Consensus 569 ~----~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 642 (676)
| +|++|+|++++.+++++. +++||+++++.+|+.|+++.+++.+|.+..+..++... ....+|++
T Consensus 242 ~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~---------~~~~~d~~ 312 (347)
T 4id9_A 242 FRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG---------VYYHTSNE 312 (347)
T ss_dssp CEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC---------CBCCBCCH
T ss_pred CccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc---------cccccCHH
Confidence 7 999999999999999873 57999999999999999999999999876554333211 15578999
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
|+++.++|. .+|+++|++++..+.+
T Consensus 313 k~~~~lG~~p~~~~~~~l~~~~~~~~~ 339 (347)
T 4id9_A 313 RIRNTLGFEAEWTMDRMLEEAATARRQ 339 (347)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 998855554 3899999999877654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=296.77 Aligned_cols=272 Identities=14% Similarity=0.132 Sum_probs=212.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
++|+|||||||||||++|+++|+++|++| .++.+|++|.+.+.++++++++|+|||
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 45799999999999999999999999765 245689999999999999878899999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+..|.+.|
T Consensus 93 ~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~-------~~E~~~~~p~~~Y 162 (335)
T 1rpn_A 93 LAAQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER-------QDENTPFYPRSPY 162 (335)
T ss_dssp CCSCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHH
T ss_pred Ccccc---chhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCC-------CCcccCCCCCChh
Confidence 99976 44445567788999999999999999999874 788999999997654333 5566677888999
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCce-eccCC-----CccchhhHHHHH
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKV-VNIPN-----SMTILDELLPIS 579 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~-~~~~~-----~~~~v~D~a~~~ 579 (676)
+.+|+.+|.+++.+.+.++++++++|++++|||. .++.++..+... ...++ +|+|++|+|+++
T Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~ 242 (335)
T 1rpn_A 163 GVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM 242 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHH
Confidence 9999999999998866678999999999999984 123334445432 22222 899999999999
Q ss_pred HHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCc-ccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHH
Q 005818 580 VEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFK-WTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKE 656 (676)
Q Consensus 580 ~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~ 656 (676)
+.+++++..++||+++++++|+.|+++.+.+.+|.+.. ..++..... .........+|++|+++.++|. .+|++
T Consensus 243 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 319 (335)
T 1rpn_A 243 WLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF---RPAEVDVLLGNPAKAQRVLGWKPRTSLDE 319 (335)
T ss_dssp HHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC---CSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred HHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccc---CCCcchhhcCCHHHHHHhcCCCcCCCHHH
Confidence 99999877799999999999999999999999997632 122221100 0111124568999998755554 38999
Q ss_pred HHHHhhhccCC
Q 005818 657 SLIKNVFEPNK 667 (676)
Q Consensus 657 ~l~~~~~~~~~ 667 (676)
+|++++..+.+
T Consensus 320 ~l~~~~~~~~~ 330 (335)
T 1rpn_A 320 LIRMMVEADLR 330 (335)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999876543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=291.41 Aligned_cols=265 Identities=18% Similarity=0.213 Sum_probs=209.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|+|+||||+||||++|+++|+++|++| .++.+|++|++.+.++++..++|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~--- 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA--- 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC---
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc---
Confidence 589999999999999999999999866 24568999999999999855569999999965
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecC-eeeec-CCCCCCCCCCCccccCCCCCCCCchhhhHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATG-CIFEY-DAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMV 523 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~-~v~~~-~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 523 (676)
....+..++...+++|+.|+.+++++|++.++ ++|++||. .+|+. ....| .+|+.+..|.+.|+.||..+
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER-------AEETWPPRPKSPYAASKAAF 150 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCC-------BCTTSCCCCCSHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCC-------cCCCCCCCCCChHHHHHHHH
Confidence 34445567788899999999999999999887 77888887 78864 22223 45566777889999999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCceecc-----CC-----CccchhhHHHHHHHH
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKVVNI-----PN-----SMTILDELLPISVEM 582 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~~-----~~-----~~~~v~D~a~~~~~~ 582 (676)
|++++.+.+..+++++++||+++|||. .++.++..+.+.... ++ +|+|++|+|++++.+
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 230 (311)
T 2p5y_A 151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230 (311)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHH
Confidence 999988766678999999999999985 134445555543322 22 899999999999999
Q ss_pred HhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHH
Q 005818 583 AKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIK 660 (676)
Q Consensus 583 ~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~ 660 (676)
++.+ +++||+++++.+|+.|+++.+++.+|.+.++...+.. ........+|++|+++ ++|. .+|+++|++
T Consensus 231 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~~ 302 (311)
T 2p5y_A 231 LFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR------PGDLERSVLSPLKLMA-HGWRPKVGFQEGIRL 302 (311)
T ss_dssp HHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC------TTCCSBCCBCCHHHHT-TTCCCSSCHHHHHHH
T ss_pred HhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC------ccchhhccCCHHHHHH-CCCCCCCCHHHHHHH
Confidence 9876 7899999999999999999999999987655333321 1111256789999988 5554 489999999
Q ss_pred hhhccCC
Q 005818 661 NVFEPNK 667 (676)
Q Consensus 661 ~~~~~~~ 667 (676)
++..+.+
T Consensus 303 ~~~~~~~ 309 (311)
T 2p5y_A 303 TVDHFRG 309 (311)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9876543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=292.22 Aligned_cols=271 Identities=16% Similarity=0.176 Sum_probs=211.9
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCcee--------------eccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPFE--------------YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~--------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
.++|+|+|||||||||++|+++|+++|++|. ++.+|++|++.+.+++++.++|+|||+||.. .
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~ 86 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS---S 86 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC---C
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc---c
Confidence 3457999999999999999999999998762 4578999999999999885679999999976 4
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHc-C-CcEEEeecCeeeecC--CCCCCCCCCCccccCCCCCCCCchhhhHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCREN-G-LLMMNYATGCIFEYD--AKHPEGTGIGFKEEDKPNFTGSFYSKTKAMV 523 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~-~~~v~~sS~~v~~~~--~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 523 (676)
...+..++...+++|+.|+.+++++|++. + .++|++||..+|+.. ...| .+|+.+..|.+.|+.||..+
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~ 159 (321)
T 2pk3_A 87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESP-------VSEENQLRPMSPYGVSKASV 159 (321)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCS-------BCTTSCCBCCSHHHHHHHHH
T ss_pred hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCC-------CCCCCCCCCCCccHHHHHHH
Confidence 44455677889999999999999999876 3 478999999999754 2223 55666777889999999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHh---c--CceeccC-----CCccchhhHHHHHHHHHhc
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISR---Y--NKVVNIP-----NSMTILDELLPISVEMAKR 585 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~---~--~~~~~~~-----~~~~~v~D~a~~~~~~~~~ 585 (676)
|++++.+.+.++++++++||+++|||. .++..+.. + ......+ .+++|++|+|++++.+++.
T Consensus 160 E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 239 (321)
T 2pk3_A 160 GMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY 239 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence 999998766678999999999999985 23444444 4 2322222 2789999999999999987
Q ss_pred C-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-CC-CHHHHHHHhh
Q 005818 586 N-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-LL-SIKESLIKNV 662 (676)
Q Consensus 586 ~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~~-~~~~~l~~~~ 662 (676)
+ .+++||+++++.+|+.|+++.+.+.+|.+..+...+.. . .........+|++|+++.++| +. +|+++|++++
T Consensus 240 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-~---~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~ 315 (321)
T 2pk3_A 240 GKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ-L---RPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEIL 315 (321)
T ss_dssp CCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG-C---CSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHH
T ss_pred CCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc-C---CCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHH
Confidence 6 45699999999999999999999999987655433311 0 011112567899999886555 44 8999999988
Q ss_pred hccC
Q 005818 663 FEPN 666 (676)
Q Consensus 663 ~~~~ 666 (676)
..+.
T Consensus 316 ~~~~ 319 (321)
T 2pk3_A 316 QSYR 319 (321)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=289.38 Aligned_cols=253 Identities=12% Similarity=0.084 Sum_probs=201.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNV 448 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 448 (676)
+||+|+||| +||||++|++.|+++|++| .++.+|++|.+.+.+++++ ++|+|||+|+..
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~----- 74 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAAS----- 74 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHH-----
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCC-----
Confidence 357899999 5999999999999999876 4567899999999998887 459999999954
Q ss_pred chhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHH
Q 005818 449 DWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELL 527 (676)
Q Consensus 449 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~ 527 (676)
..++...+++|+.++.+++++|++.++ ++|++||+.+|+.....+ .+|+.+..|.+.|+.+|+.+|++
T Consensus 75 ---~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~- 143 (286)
T 3gpi_A 75 ---EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEW-------LDEDTPPIAKDFSGKRMLEAEAL- 143 (286)
T ss_dssp ---HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSE-------ECTTSCCCCCSHHHHHHHHHHHH-
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCC-------CCCCCCCCCCChhhHHHHHHHHH-
Confidence 356678889999999999999998886 788999999997654333 56777888889999999999999
Q ss_pred HHccCeEEEEeeecccCCCCChH--HHHHHHHhcCceec---cCCCccchhhHHHHHHHHHhc---C-CCceeEccCCCc
Q 005818 528 KEYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVVN---IPNSMTILDELLPISVEMAKR---N-LSGIWNFTNPGV 598 (676)
Q Consensus 528 ~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~---~~~~~~~v~D~a~~~~~~~~~---~-~~g~yn~~~~~~ 598 (676)
+.+ ++++++|++++|||. .++.++.. ..... ...+|+|++|+|++++.++++ . .+++||++++++
T Consensus 144 ~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (286)
T 3gpi_A 144 LAA-----YSSTILRFSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQP 217 (286)
T ss_dssp GGG-----SSEEEEEECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred Hhc-----CCeEEEecccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCC
Confidence 654 889999999999996 46666655 32221 122899999999999999987 3 457999999999
Q ss_pred ccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhccCCC
Q 005818 599 VSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 599 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
+|+.|+++.+++.+|.+..+...+ ....+..+|++|++.++|.+ |+|+++|++++..+.++
T Consensus 218 ~s~~e~~~~i~~~~g~~~~~~~~~---------~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 218 LPVHDLLRWLADRQGIAYPAGATP---------PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMREG 280 (286)
T ss_dssp EEHHHHHHHHHHHTTCCCCCSCCC---------CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHcCCCCCCCCCc---------ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhcc
Confidence 999999999999999876553222 12236779999999666555 37999999998876654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=298.41 Aligned_cols=268 Identities=15% Similarity=0.126 Sum_probs=204.5
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcC-Cce--------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKG-IPF--------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g-~~v--------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
..||+|+|||||||||++|+++|+++| ++| .++.+|++|++.+.++++++ |+|||+|
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~--d~Vih~A 107 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY--DYVFHLA 107 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC--SEEEECC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC--CEEEECC
Confidence 456899999999999999999999999 765 34568999999999998866 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecCCCCCCCCCCCccc--cCC---CC-CC
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYDAKHPEGTGIGFKE--EDK---PN-FT 512 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~--e~~---~~-~p 512 (676)
+.. ....+..++...+++|+.++.+++++|++. ++ ++|++||..+|+.....+ .. |+. +. .|
T Consensus 108 ~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~-------~~~~E~~~~~~~~~~ 177 (377)
T 2q1s_A 108 TYH---GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDD-------AKATEETDIVSLHNN 177 (377)
T ss_dssp CCS---CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC---------------------CCCCCCCSSCC
T ss_pred Ccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCC-------cCcccccccccccCC
Confidence 976 444455677889999999999999999998 76 788999999997643323 33 444 55 67
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH---------------------HHHHHHhcCceeccC-----
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------------------FITKISRYNKVVNIP----- 566 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------------------~~~~~~~~~~~~~~~----- 566 (676)
.+.|+.+|..+|++++.+.+..+++++++||+++|||.. ++..+..+......+
T Consensus 178 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~ 257 (377)
T 2q1s_A 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT 257 (377)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence 789999999999999987656689999999999998743 334445554432222
Q ss_pred CCccchhhHHHH-HHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCC-ccccChhHH
Q 005818 567 NSMTILDELLPI-SVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRS-NNELDASKL 644 (676)
Q Consensus 567 ~~~~~v~D~a~~-~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ld~~k~ 644 (676)
.+|+|++|+|++ ++.+++++..|+||+++++++|+.|+++.+.+.+|.+..+...+... .... ...+|++|+
T Consensus 258 ~~~i~v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------~~~~~~~~~d~~k~ 331 (377)
T 2q1s_A 258 RDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRP------WDNSGKRFGSPEKA 331 (377)
T ss_dssp ECCEEHHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCG------GGCC-CCCCCCHHH
T ss_pred EeeEEHHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCc------cccccccccCHHHH
Confidence 289999999999 99999877567999999999999999999999999876554443211 0112 457899999
Q ss_pred HhhCCC-C-CCHHHHHHHhhhccCC
Q 005818 645 KKEFPE-L-LSIKESLIKNVFEPNK 667 (676)
Q Consensus 645 ~~~~~~-~-~~~~~~l~~~~~~~~~ 667 (676)
++.++| + .+|+++|++++..+.+
T Consensus 332 ~~~lG~~p~~~l~e~l~~~~~~~~~ 356 (377)
T 2q1s_A 332 RRELGFSADVSIDDGLRKTIEWTKA 356 (377)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 765555 4 4899999999876543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=290.74 Aligned_cols=268 Identities=16% Similarity=0.158 Sum_probs=207.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
||+|+|||||||||++|+++|+++|++| .++.+|++|.+.+.++++..++|+|||+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~-- 78 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS-- 78 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc--
Confidence 5799999999999999999999999865 34668999999999999833449999999966
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+..|.+.|+.+|..+|
T Consensus 79 -~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e 150 (330)
T 2c20_A 79 -LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDL-------ITEETMTNPTNTYGETKLAIE 150 (330)
T ss_dssp -CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSS-------BCTTSCCCCSSHHHHHHHHHH
T ss_pred -CccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCC-------CCcCCCCCCCChHHHHHHHHH
Confidence 33344567788999999999999999999886 688888889987544333 566667778899999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH-------------HHHH---HHHhc-Ccee-cc--------C---CCccchhhH
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR-------------NFIT---KISRY-NKVV-NI--------P---NSMTILDEL 575 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~-------------~~~~---~~~~~-~~~~-~~--------~---~~~~~v~D~ 575 (676)
++++.+.+..+++++++|++++|||. .++. +...+ .+.+ .. + .+|+|++|+
T Consensus 151 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv 230 (330)
T 2c20_A 151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230 (330)
T ss_dssp HHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHH
Confidence 99998765568999999999999873 2332 22222 2212 11 1 189999999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE- 650 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~- 650 (676)
|++++.+++++ ..++||+++++++|+.|+++.+.+.+|.+.++...+.. ........+|++|+++.++|
T Consensus 231 a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~~lG~~ 304 (330)
T 2c20_A 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR------AGDPARLVASSQKAKEKLGWD 304 (330)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC------SSCCSEECBCCHHHHHHHCCC
T ss_pred HHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC------CCcccccccCHHHHHHHhCCC
Confidence 99999999764 24799999999999999999999999987655332211 11112567899999775554
Q ss_pred CC--CHHHHHHHhhhccCC
Q 005818 651 LL--SIKESLIKNVFEPNK 667 (676)
Q Consensus 651 ~~--~~~~~l~~~~~~~~~ 667 (676)
+. +++++|++++..+.+
T Consensus 305 p~~~~l~~~l~~~~~~~~~ 323 (330)
T 2c20_A 305 PRYVNVKTIIEHAWNWHQK 323 (330)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHH
Confidence 42 899999999876654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=289.72 Aligned_cols=270 Identities=14% Similarity=0.123 Sum_probs=208.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec----cccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHH
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG----KGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETI 459 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~----~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 459 (676)
+|+|+|||||||||++|+++|+++|++|..+ .+|+.|.+.+.++++..++|+|||+|+... ....+..++...+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~~~~~ 80 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADFI 80 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecC--CcchhhhCHHHHH
Confidence 4799999999999999999999999987544 479999999999998545699999999652 1233456778889
Q ss_pred hhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC---CCCCC-CchhhhHHHHHHHHHHccCeE
Q 005818 460 RTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK---PNFTG-SFYSKTKAMVEELLKEYDNVC 534 (676)
Q Consensus 460 ~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~---~~~p~-~~Y~~sK~~~E~~~~~~~~~~ 534 (676)
++|+.++.+++++|++.++ ++|++||..+|+.....| +.|++. +..|. +.|+.+|..+|++++.+.+..
T Consensus 81 ~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 154 (321)
T 1e6u_A 81 YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP------MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154 (321)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS------BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCC------cCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999987 788899999997544333 333331 44453 589999999999999876666
Q ss_pred EEEeeecccCCCCChHH------------HHHHHHh----c-CceeccCC-----CccchhhHHHHHHHHHhcCC-----
Q 005818 535 TLRVRMPISSDLNNPRN------------FITKISR----Y-NKVVNIPN-----SMTILDELLPISVEMAKRNL----- 587 (676)
Q Consensus 535 ~l~~~~~r~~~~~g~~~------------~~~~~~~----~-~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~----- 587 (676)
+++++++||+++|||.. ++..+.. + ......++ +|+|++|+|++++.+++++.
T Consensus 155 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~ 234 (321)
T 1e6u_A 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE 234 (321)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccccccc
Confidence 89999999999999851 3333433 2 23222222 89999999999999998763
Q ss_pred -----CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHh
Q 005818 588 -----SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKN 661 (676)
Q Consensus 588 -----~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~ 661 (676)
+++||+++++++|+.|+++.+.+.+|.+..+...+.. ........+|++|++++++.+ .+|+++|+++
T Consensus 235 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~ 308 (321)
T 1e6u_A 235 NTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK------PDGTPRKLLDVTRLHQLGWYHEISLEAGLAST 308 (321)
T ss_dssp TSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS------CCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHH
T ss_pred ccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC------CCCcccccCCHHHHHhcCCccCCcHHHHHHHH
Confidence 3799999999999999999999999987654333311 111225678999998844444 4999999999
Q ss_pred hhccCC
Q 005818 662 VFEPNK 667 (676)
Q Consensus 662 ~~~~~~ 667 (676)
+..+.+
T Consensus 309 ~~~~~~ 314 (321)
T 1e6u_A 309 YQWFLE 314 (321)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876644
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=289.88 Aligned_cols=273 Identities=17% Similarity=0.161 Sum_probs=209.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHc--CCce-----------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKK--GIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~--g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
||+|+||||+||||++|+++|+++ |++| .++.+|++|++.+.++++++ |+|||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih 81 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIVH 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcC--CEEEE
Confidence 579999999999999999999999 7655 34567999999999999988 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCC-CC-----CCCCCCccccCCCCCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAK-HP-----EGTGIGFKEEDKPNFT 512 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~-~~-----~~~~~~~~~e~~~~~p 512 (676)
+||.. ....+..++...+++|+.++.+++++|.+.++++|++||..+|+.... .| ..... ..+|+.+..|
T Consensus 82 ~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~-~~~E~~~~~~ 157 (348)
T 1oc2_A 82 YAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGE-KFTAETNYNP 157 (348)
T ss_dssp CCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS-SBCTTSCCCC
T ss_pred CCccc---CccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCC-CcCCCCCCCC
Confidence 99976 344455677889999999999999999998889999999999975421 00 00001 2455567778
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHH
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPIS 579 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~ 579 (676)
.+.|+.+|..+|++++.+.+..+++++++||+++|||. .++..+..+......++ +|+|++|+|+++
T Consensus 158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 237 (348)
T 1oc2_A 158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237 (348)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHH
Confidence 89999999999999998866678999999999999985 23445555554332222 899999999999
Q ss_pred HHHHhcCCC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-C-CC-HH
Q 005818 580 VEMAKRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-L-LS-IK 655 (676)
Q Consensus 580 ~~~~~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~-~~-~~ 655 (676)
+.+++.+.. ++||+++++++|+.|+++.+.+.+|.+.......... ........+|++|+++.++| + .+ |+
T Consensus 238 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 312 (348)
T 1oc2_A 238 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR-----AGHDLRYAIDASKLRDELGWTPQFTDFS 312 (348)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC-----TTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred HHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCC-----CCcccccccCHHHHHHHcCCCCCCCcHH
Confidence 999987644 5999999999999999999999999764321111000 00111346899999875554 4 35 99
Q ss_pred HHHHHhhhccCC
Q 005818 656 ESLIKNVFEPNK 667 (676)
Q Consensus 656 ~~l~~~~~~~~~ 667 (676)
++|++++..+.+
T Consensus 313 ~~l~~~~~~~~~ 324 (348)
T 1oc2_A 313 EGLEETIQWYTD 324 (348)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999876543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=287.97 Aligned_cols=267 Identities=17% Similarity=0.186 Sum_probs=207.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC--Cce------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG--IPF------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g--~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
+|+||||||+||||++|+++|+++| ++| .++.+|++|.+.+.+++.++ |+||
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi 80 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKV--DGVV 80 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTC--SEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCC--CEEE
Confidence 3789999999999999999999996 544 24568999999999999765 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
|+||.. ....+..++...+++|+.++.+++++|.+.+. ++|++||..+|+.....+ .+|+.+..|.+.
T Consensus 81 h~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~E~~~~~~~~~ 150 (336)
T 2hun_A 81 HLAAES---HVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS-------FTENDRLMPSSP 150 (336)
T ss_dssp ECCCCC---CHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC-------BCTTBCCCCCSH
T ss_pred ECCCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC-------cCCCCCCCCCCc
Confidence 999976 34445567788999999999999999999874 889999999997543333 556667778899
Q ss_pred hhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccC-----CCccchhhHHHHHHHH
Q 005818 516 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIP-----NSMTILDELLPISVEM 582 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~ 582 (676)
|+.||..+|++++.+.+.++++++++||+++|||. .++..+..+......+ .+|+|++|+|++++.+
T Consensus 151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 230 (336)
T 2hun_A 151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELV 230 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHH
Confidence 99999999999998766668999999999999985 2344455554433222 2899999999999999
Q ss_pred HhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-C-CCHHHHHH
Q 005818 583 AKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-L-LSIKESLI 659 (676)
Q Consensus 583 ~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~-~~~~~~l~ 659 (676)
++++. +++||+++++.+|+.|+++.+++.+|.+.+....... .........+|++|+++.++| + .+|+++|+
T Consensus 231 ~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~ 305 (336)
T 2hun_A 231 LLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVED-----RPGHDLRYSLDSWKITRDLKWRPKYTFDEGIK 305 (336)
T ss_dssp HHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECC-----CTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHH
T ss_pred HhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCC-----CCCchhhhcCCHHHHHHHhCCCCCCCHHHHHH
Confidence 98764 4599999999999999999999999976432111100 001111346899999885555 4 48999999
Q ss_pred HhhhccCC
Q 005818 660 KNVFEPNK 667 (676)
Q Consensus 660 ~~~~~~~~ 667 (676)
+++..+.+
T Consensus 306 ~~~~~~~~ 313 (336)
T 2hun_A 306 KTIDWYLK 313 (336)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99876543
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=292.45 Aligned_cols=273 Identities=21% Similarity=0.193 Sum_probs=211.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|+|+||||+||||++|++.|+++|++| .++.+|++|++++.++++++++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999765 23467999999999999987889
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|||+||.. ....+..++...+++|+.++.+++++|.+.++ ++|++||..+|+.....+ .+|+.+.
T Consensus 105 ~vih~A~~~---~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~-------~~E~~~~ 174 (375)
T 1t2a_A 105 EIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP-------QKETTPF 174 (375)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS-------BCTTSCC
T ss_pred EEEECCCcc---cccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCC-------CCccCCC
Confidence 999999976 44444567788899999999999999999885 788999999997544333 5566677
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCce-eccCC-----Cccchh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKV-VNIPN-----SMTILD 573 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~-~~~~~-----~~~~v~ 573 (676)
.|.+.|+.+|+.+|.+++.+.+.++++++++|++++|||. .++.++..+... ...++ +|+|++
T Consensus 175 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 254 (375)
T 1t2a_A 175 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 254 (375)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence 7889999999999999998876678999999999999984 123334445432 22222 899999
Q ss_pred hHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCccc--ccchH-----------hhhhHhccC--CCccc
Q 005818 574 ELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWT--NFTLE-----------EQAKVIVAP--RSNNE 638 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~-----------~~~~~~~~~--~~~~~ 638 (676)
|+|++++.+++++..++||+++++++|+.|+++.+.+.+|.+..+. ++|.. ........+ .....
T Consensus 255 Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (375)
T 1t2a_A 255 DYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQ 334 (375)
T ss_dssp HHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred HHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhc
Confidence 9999999999987779999999999999999999999999764421 01100 000111111 12456
Q ss_pred cChhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 639 LDASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 639 ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
+|++|+++.++|. .+|+++|++++..+.+
T Consensus 335 ~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 365 (375)
T 1t2a_A 335 GDCTKAKQKLNWKPRVAFDELVREMVHADVE 365 (375)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCCccCCHHHHHHHHHHHHHH
Confidence 7999998755554 3899999998876544
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=271.32 Aligned_cols=268 Identities=17% Similarity=0.138 Sum_probs=215.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||+++++.|+ + +++|++++|.... . ++ +.+|+.|++++.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~------~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEI------Q-----GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCC------T-----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcC------C-----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 479999999999999999999 4 4788888886421 1 12 8899999999999885446999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+......+.+++...++.|+.++.+++++|++.+ + +|||+||..+|+.... ...|+++..|.+.|+.+|..+
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~----~~~e~~~~~~~~~Y~~sK~~~ 137 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG----NYKEEDIPNPINYYGLSKLLG 137 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC----SBCTTSCCCCSSHHHHHHHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC----CcCCCCCCCCCCHHHHHHHHH
Confidence 999876544456788899999999999999999877 5 9999999999987653 236777778889999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCc
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~ 247 (676)
|.+++. ++++++|++.|||+ ..+...+...+..+..+.+.++ .++++|++|+|++++.+++++. ++
T Consensus 138 e~~~~~------~~~~~iR~~~v~G~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-~g 203 (273)
T 2ggs_A 138 ETFALQ------DDSLIIRTSGIFRN----KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-TG 203 (273)
T ss_dssp HHHHCC------TTCEEEEECCCBSS----SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-CE
T ss_pred HHHHhC------CCeEEEeccccccc----cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-CC
Confidence 998865 67899999999983 3566677777777877776654 7899999999999999998765 56
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceeee--cCCCCCCcccccCHHHHHh-CCCcc-cCCHHHHH
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFV--ENRPFNDQRYFLDVQKLKQ-LGWYE-RVTWEEGL 313 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~-lg~~~-~~~~~~~l 313 (676)
+||+++ +.+|+.|+++.+.+.+|.+.+...... ...+.......+|++|+++ |||+| .+++++++
T Consensus 204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 204 IIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred eEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 999999 999999999999999998765321110 0112223456789999986 99999 57887654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=288.75 Aligned_cols=268 Identities=15% Similarity=0.106 Sum_probs=210.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~ 433 (676)
.||+|+|||||||||++|++.|+++|++| .++.+|++|.+.+.++++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV-- 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC--
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC--
Confidence 35799999999999999999999999765 24567999999999999866
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
|+|||+|+.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....| .+|+.+..|
T Consensus 104 d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~-------~~E~~~~~~ 173 (352)
T 1sb8_A 104 DYVLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KVEDTIGKP 173 (352)
T ss_dssp SEEEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCC
T ss_pred CEEEECCccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCC-------CCCCCCCCC
Confidence 9999999965 33445567788899999999999999999987 688999999987544333 556667788
Q ss_pred CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCC-----CccchhhH
Q 005818 513 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTILDEL 575 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~v~D~ 575 (676)
.+.|+.+|..+|++++.+.+..+++++++||+++|||. .++..+..+.+....++ +|+|++|+
T Consensus 174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 253 (352)
T 1sb8_A 174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 253 (352)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence 89999999999999988766668999999999999985 14455555655332222 89999999
Q ss_pred HHHHHHHHhcC---CCceeEccCCCcccHHHHHHHHHhhc---CCCCcccccchHhhhhHhccCCCccccChhHHHhhCC
Q 005818 576 LPISVEMAKRN---LSGIWNFTNPGVVSHNEILEMYKAYI---DPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFP 649 (676)
Q Consensus 576 a~~~~~~~~~~---~~g~yn~~~~~~~s~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~ 649 (676)
|++++.++... .+++||+++++.+|+.|+++.+.+.+ |.+....+... ........+..+|++|+++.++
T Consensus 254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lG 329 (352)
T 1sb8_A 254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR----DFREGDVRHSLADISKAAKLLG 329 (352)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEE----CCCTTCCSBCCBCCHHHHHHTC
T ss_pred HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceec----CCCccchhhccCCHHHHHHHhC
Confidence 99999988762 45799999999999999999999999 87655321100 0000111256789999988666
Q ss_pred CC--CCHHHHHHHhhhccC
Q 005818 650 EL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 650 ~~--~~~~~~l~~~~~~~~ 666 (676)
|. .+|+++|++++..+.
T Consensus 330 ~~p~~~~~e~l~~~~~~~~ 348 (352)
T 1sb8_A 330 YAPKYDVSAGVALAMPWYI 348 (352)
T ss_dssp CCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 54 489999999987654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=284.88 Aligned_cols=267 Identities=16% Similarity=0.155 Sum_probs=185.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee----------ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY----------GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCET 453 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~----------~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 453 (676)
+|+|+|||||||||++|+++|+++|++|.. +.+|++|++.+.+++++.++|+|||+||.. ....+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~ 78 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAER---RPDVVEN 78 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCccc---Chhhhhc
Confidence 468999999999999999999999998854 348999999999999876679999999976 3444556
Q ss_pred chhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe
Q 005818 454 HKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV 533 (676)
Q Consensus 454 ~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 533 (676)
++...+++|+.++.+++++|.+.++++|++||..+|+. ...| .+|+.+..|.+.|+.+|..+|++++.+.
T Consensus 79 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~-------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~-- 148 (315)
T 2ydy_A 79 QPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPP-------YREEDIPAPLNLYGKTKLDGEKAVLENN-- 148 (315)
T ss_dssp ---------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCS-------BCTTSCCCCCSHHHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCC-------CCCCCCCCCcCHHHHHHHHHHHHHHHhC--
Confidence 77888999999999999999999899999999999975 2233 5566677788999999999999998863
Q ss_pred EEEEeeecccCCCCChH---------HHHHHHH-hcCceecc---CCCccchhhHHHHHHHHHhcC-----CCceeEccC
Q 005818 534 CTLRVRMPISSDLNNPR---------NFITKIS-RYNKVVNI---PNSMTILDELLPISVEMAKRN-----LSGIWNFTN 595 (676)
Q Consensus 534 ~~l~~~~~r~~~~~g~~---------~~~~~~~-~~~~~~~~---~~~~~~v~D~a~~~~~~~~~~-----~~g~yn~~~ 595 (676)
++++++|++++|||. .++..+. .+...... ..+++|++|+|++++.+++++ .+++||+++
T Consensus 149 --~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~ 226 (315)
T 2ydy_A 149 --LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG 226 (315)
T ss_dssp --TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred --CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence 355788888888874 1334444 34433222 238999999999999998753 457999999
Q ss_pred CCcccHHHHHHHHHhhcCCCCc-ccccchHhhhhHhccCC-CccccChhHHHhhCCCC-CCHHHHHHHhhhccCCC
Q 005818 596 PGVVSHNEILEMYKAYIDPGFK-WTNFTLEEQAKVIVAPR-SNNELDASKLKKEFPEL-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 596 ~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~~ 668 (676)
++++|+.|+++.+.+.+|.+.. +.+++. ... ....+ .+..+|++|++++++.+ .+|+++|++++..+.+.
T Consensus 227 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~-~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 227 NEQMTKYEMACAIADAFNLPSSHLRPITD--SPV-LGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp SCCBCHHHHHHHHHHHTTCCCTTEEEECS--CCC-SSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred CCcccHHHHHHHHHHHhCCChhheecccc--ccc-cccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 9999999999999999998754 333332 000 01111 25678999999984424 58999999999877764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=288.04 Aligned_cols=270 Identities=21% Similarity=0.236 Sum_probs=207.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
+|+|+||||+||||++|+++|+++|++| .++.+|++|++.+.++++++++|+|||+|
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 4799999999999999999999999765 24568999999999999986779999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
|.. ....+..++...+++|+.++.+++++|.+.+ + ++|++||..+|+..... .+ ..|+.+..|.+.|+.
T Consensus 89 ~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~-----~~-~~E~~~~~~~~~Y~~ 159 (357)
T 1rkx_A 89 AQP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI-----WG-YRENEAMGGYDPYSN 159 (357)
T ss_dssp SCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS-----SC-BCTTSCBCCSSHHHH
T ss_pred CCc---ccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC-----CC-CCCCCCCCCCCccHH
Confidence 964 4445567778899999999999999999886 5 78888998999754321 11 445556677899999
Q ss_pred hHHHHHHHHHHccCeE---------EEEeeecccCCCCChHH---------HHHHHHhcCceeccC----CCccchhhHH
Q 005818 519 TKAMVEELLKEYDNVC---------TLRVRMPISSDLNNPRN---------FITKISRYNKVVNIP----NSMTILDELL 576 (676)
Q Consensus 519 sK~~~E~~~~~~~~~~---------~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~----~~~~~v~D~a 576 (676)
+|+.+|++++.+.+.+ +++++++||+++|||.. ++..+..+....... .+|+|++|+|
T Consensus 160 sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 160 SKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHH
Confidence 9999999998875433 89999999999999852 344444554432211 1899999999
Q ss_pred HHHHHHHhc------CCCceeEccCC--CcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhC
Q 005818 577 PISVEMAKR------NLSGIWNFTNP--GVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEF 648 (676)
Q Consensus 577 ~~~~~~~~~------~~~g~yn~~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~ 648 (676)
++++.++++ ..+++||++++ +++|+.|+++.+.+.+|.+..+...+.. . ........+|++|+++.+
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~--~~~~~~~~~d~~k~~~~l 314 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA---H--PHEAHYLKLDCSKAKMQL 314 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHH
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC---C--CcCcccccCCHHHHHHHh
Confidence 999998874 24579999984 6899999999999999987654322211 0 111225678999998755
Q ss_pred CCC--CCHHHHHHHhhhccCC
Q 005818 649 PEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 649 ~~~--~~~~~~l~~~~~~~~~ 667 (676)
+|. .+|+++|++++..+.+
T Consensus 315 G~~p~~~l~e~l~~~~~~~~~ 335 (357)
T 1rkx_A 315 GWHPRWNLNTTLEYIVGWHKN 335 (357)
T ss_dssp CCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCcCCcHHHHHHHHHHHHHH
Confidence 554 4899999998876543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=291.54 Aligned_cols=271 Identities=20% Similarity=0.260 Sum_probs=211.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
+||+|+|||||||||++|+++|+++|++| .++.+|++|.+.+.++++++ |+|||+|+...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCC--CEEEECceecC
Confidence 46799999999999999999999999865 35678999999999999876 99999999652
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCC--CCCCCCchhhhHH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK--PNFTGSFYSKTKA 521 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~--~~~p~~~Y~~sK~ 521 (676)
....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+. ... ..+|+. +..|.+.|+.+|.
T Consensus 106 --~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~-~~~-~~~E~~~~~~~~~~~Y~~sK~ 181 (379)
T 2c5a_A 106 --GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLET-TNV-SLKESDAWPAEPQDAFGLEKL 181 (379)
T ss_dssp --CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSS-SSC-EECGGGGSSBCCSSHHHHHHH
T ss_pred --cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCc-cCC-CcCcccCCCCCCCChhHHHHH
Confidence 11222567788899999999999999999987 7889999899875422110 011 233333 5567789999999
Q ss_pred HHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCc-eeccCC-----CccchhhHHHHHHHHH
Q 005818 522 MVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNK-VVNIPN-----SMTILDELLPISVEMA 583 (676)
Q Consensus 522 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~-~~~~~~-----~~~~v~D~a~~~~~~~ 583 (676)
.+|++++.+.+..+++++++||+++|||. .++.++..+.+ ....++ +|+|++|+|++++.++
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 261 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence 99999988766678999999999999984 24555555554 222222 8999999999999999
Q ss_pred hcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-C-CHHHHHHHh
Q 005818 584 KRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-L-SIKESLIKN 661 (676)
Q Consensus 584 ~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~-~~~~~l~~~ 661 (676)
+++.+++||+++++.+|+.|+++.+.+.+|.+..+..++... . .....+|++|+++.++|. . +|+++|+++
T Consensus 262 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------~-~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 334 (379)
T 2c5a_A 262 KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE------G-VRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 334 (379)
T ss_dssp HSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC------C-CSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred hccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC------C-cccccCCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 887778999999999999999999999999876654444211 1 124568999998765554 3 899999998
Q ss_pred hhccC
Q 005818 662 VFEPN 666 (676)
Q Consensus 662 ~~~~~ 666 (676)
+..+.
T Consensus 335 ~~~~~ 339 (379)
T 2c5a_A 335 YFWIK 339 (379)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87554
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=284.12 Aligned_cols=267 Identities=15% Similarity=0.107 Sum_probs=203.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHc--CCce----------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKK--GIPF----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~--g~~v----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
+|+|+|||||||||++|+++|+++ |++| .++.+|++|.+++.++++..++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~-- 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL-- 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC--
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC--
Confidence 368999999999999999999999 8766 34678999999999999855569999999965
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
.. .+..++...+++|+.++.+++++|++.++ ++|++||..+|+..... .+.+|+.+..|.+.|+.+|..+|
T Consensus 80 -~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~------~~~~e~~~~~~~~~Y~~sK~~~e 151 (312)
T 2yy7_A 80 -SA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPK------ENTPQYTIMEPSTVYGISKQAGE 151 (312)
T ss_dssp -HH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCS------SSBCSSCBCCCCSHHHHHHHHHH
T ss_pred -CC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCC------CCccccCcCCCCchhHHHHHHHH
Confidence 22 23467788899999999999999999987 78888999999753221 13666777788899999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccC-----CCccchhhHHHHHHHHHhcCC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIP-----NSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~ 587 (676)
++++.+.+..+++++++||+++|||. .++.+.+..+.....+ .+|+|++|+|++++.+++++.
T Consensus 152 ~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 231 (312)
T 2yy7_A 152 RWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPV 231 (312)
T ss_dssp HHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred HHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcc
Confidence 99988766678999999999999942 1223333344433222 289999999999999998763
Q ss_pred -----CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHH
Q 005818 588 -----SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIK 660 (676)
Q Consensus 588 -----~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~ 660 (676)
+++||+++ +.+|+.|+++.+.+.+|. ..+...+... .. ........+|++|+++.++|. .+|+++|++
T Consensus 232 ~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~--~~-~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~ 306 (312)
T 2yy7_A 232 EKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFR--QK-IADSWPASIDDSQAREDWDWKHTFDLESMTKD 306 (312)
T ss_dssp GGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTH--HH-HHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHH
T ss_pred cccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCcc--cc-ccccccccCCHHHHHHHcCCCCCCCHHHHHHH
Confidence 27999997 899999999999999983 2221112100 00 111113568999998855554 389999999
Q ss_pred hhhcc
Q 005818 661 NVFEP 665 (676)
Q Consensus 661 ~~~~~ 665 (676)
++..+
T Consensus 307 ~~~~~ 311 (312)
T 2yy7_A 307 MIEHL 311 (312)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=288.88 Aligned_cols=275 Identities=16% Similarity=0.137 Sum_probs=211.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
+|+|+|||||||||++|+++|+++|++| .++.+|++|++++.++++++++|+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 4689999999999999999999999765 3456899999999999998788999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
||.. ....+..++...+++|+.|+.+++++|.+.++ ++|++||..+|+.....| ..|+.+..|.+.|+
T Consensus 83 A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~e~~~~~~~~~Y~ 152 (345)
T 2z1m_A 83 AAQS---FVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIP-------QTEKTPFYPRSPYA 152 (345)
T ss_dssp CCCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHH
T ss_pred CCCc---chhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCC-------CCccCCCCCCChhH
Confidence 9976 44445667888999999999999999998874 789999999997654333 55666777889999
Q ss_pred hhHHHHHHHHHHccCeEEEEeeecccCCCCChH---H--------HHHHHHhcCc-eeccC-----CCccchhhHHHHHH
Q 005818 518 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N--------FITKISRYNK-VVNIP-----NSMTILDELLPISV 580 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~--------~~~~~~~~~~-~~~~~-----~~~~~v~D~a~~~~ 580 (676)
.||..+|.+++.+.+.++++++++|+.++|||+ . ++.++..+.. ....+ .+|+|++|+|++++
T Consensus 153 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~ 232 (345)
T 2z1m_A 153 VAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMW 232 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHH
Confidence 999999999998866667888889999999885 1 1223334432 11222 27999999999999
Q ss_pred HHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccc--cchH-----------hhhhHhccC--CCccccChhHHH
Q 005818 581 EMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTN--FTLE-----------EQAKVIVAP--RSNNELDASKLK 645 (676)
Q Consensus 581 ~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~-----------~~~~~~~~~--~~~~~ld~~k~~ 645 (676)
.+++++..++||+++++.+|+.|+++.+.+.+|.+..+.. +|.. ........+ .....+|++|++
T Consensus 233 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 312 (345)
T 2z1m_A 233 LMMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAM 312 (345)
T ss_dssp HHHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHH
T ss_pred HHHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHH
Confidence 9998877789999999999999999999999998644321 1100 000111111 124567999998
Q ss_pred hhCCC-C-CCHHHHHHHhhhccCCC
Q 005818 646 KEFPE-L-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 646 ~~~~~-~-~~~~~~l~~~~~~~~~~ 668 (676)
+.++| + .+|+++|++++..+.+.
T Consensus 313 ~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 313 KKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp HHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHcCCcccCCHHHHHHHHHHHHHHH
Confidence 75555 4 48999999998766543
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=287.93 Aligned_cols=275 Identities=17% Similarity=0.199 Sum_probs=208.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee------------------------eccccCCChHHHHHHhhccCCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE------------------------YGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
||+|||||||||||++|++.|+++|++|. ++.+|++|++.+++++++.++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 57899999999999999999999998652 355799999999999988455999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCC---------CCCccccCC
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGT---------GIGFKEEDK 508 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~---------~~~~~~e~~ 508 (676)
||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....|..+ .....+|+.
T Consensus 81 A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~ 157 (347)
T 1orr_A 81 AGQV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 157 (347)
T ss_dssp CCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred Cccc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence 9976 34444567788899999999999999999886 589999999987543221000 000134445
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcC-----ceeccCC-----
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYN-----KVVNIPN----- 567 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~-----~~~~~~~----- 567 (676)
+..|.+.|+.+|+.+|++++.+.+..+++++++||+++|||. .++.++..+. +....++
T Consensus 158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 237 (347)
T 1orr_A 158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 237 (347)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence 666778999999999999998766668999999999999984 2344444443 3322222
Q ss_pred CccchhhHHHHHHHHHhcC--C-CceeEccCCC--cccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChh
Q 005818 568 SMTILDELLPISVEMAKRN--L-SGIWNFTNPG--VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~--~-~g~yn~~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 642 (676)
+|+|++|+|++++.+++.. . +++||++++. ++|+.|+++.+.+.+|.+..+...+. .........+|++
T Consensus 238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~ 311 (347)
T 1orr_A 238 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV------RESDQRVFVADIK 311 (347)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC------CSSCCSEECBCCH
T ss_pred eeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC------CCCCcceeecCHH
Confidence 7999999999999999852 3 3599999986 59999999999999998765544331 0111224578999
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
|+++.++|. .+|+++|++++..+.+
T Consensus 312 k~~~~lG~~p~~~~~e~l~~~~~~~~~ 338 (347)
T 1orr_A 312 KITNAIDWSPKVSAKDGVQKMYDWTSS 338 (347)
T ss_dssp HHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCccCCHHHHHHHHHHHHHH
Confidence 997765554 4899999998866543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=283.04 Aligned_cols=266 Identities=16% Similarity=0.162 Sum_probs=208.6
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCC----------------ChHHHHHHhhccCCCEEEECccccCCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE----------------NRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~----------------d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
++|+|+|||||||||++|+++|+++|++|..+..+-. ..+.+...+. ++|+|||+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~d~vi~~a~~~--- 80 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--DVRLVYHLASHK--- 80 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--TEEEEEECCCCC---
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--cCCEEEECCccC---
Confidence 4579999999999999999999999999865532211 0111122222 459999999977
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
....+..++...++ |+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+..|.+.|+.+|+.+|+
T Consensus 81 ~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 81 SVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLP-------TPEDSPLSPRSPYAASKVGLEM 152 (321)
T ss_dssp CHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred ChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCC-------CCCCCCCCCCChhHHHHHHHHH
Confidence 45556677777888 99999999999999996 788889999997654444 5666777888999999999999
Q ss_pred HHHHccCeEEE-EeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcCCCcee
Q 005818 526 LLKEYDNVCTL-RVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRNLSGIW 591 (676)
Q Consensus 526 ~~~~~~~~~~l-~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~~g~y 591 (676)
+++.+.+..++ +++++|++++|||. .++..+..+......++ +|+|++|+|++++.+++++..|+|
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g~~ 232 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSVV 232 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCSEE
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCCeE
Confidence 99998766788 99999999999985 34555666665443332 899999999999999998866799
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHh-hCCCC--CCHHHHHHHhhhccCCC
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKK-EFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~-~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
|+++++.+|+.|+++.+. .+|.+..+...+... ....+..+|++|+++ +++.+ ++|+++|++++..+.+.
T Consensus 233 ~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~------~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 305 (321)
T 3vps_A 233 NFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRP------NEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSR 305 (321)
T ss_dssp EESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCT------TCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTS
T ss_pred EecCCCcccHHHHHHHHH-HhCCCCccccCCCCC------CCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999 999887665443211 112256789999988 55555 69999999999877654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=284.53 Aligned_cols=266 Identities=16% Similarity=0.193 Sum_probs=207.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc---C---Cce------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK---G---IPF------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~---g---~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|+|+|||||||||++|+++|+++ | ++| .++.+|++|++.+.+++.++ |
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGV--D 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTC--C
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCC--C
Confidence 58999999999999999999996 7 655 24568999999999998766 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
+|||+|+.. ....+..++...+++|+.++.+++++|.+.++ ++|++||..+|+.....+ .+|+.+..|.
T Consensus 79 ~Vih~A~~~---~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~~~ 148 (337)
T 1r6d_A 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS-------WTESSPLEPN 148 (337)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC-------BCTTSCCCCC
T ss_pred EEEECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCC-------CCCCCCCCCC
Confidence 999999976 34445567788999999999999999999987 788999999997543333 4566677788
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISV 580 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~ 580 (676)
+.|+.||..+|++++.+.+..+++++++||+++|||. .++..+..+......++ +|+|++|+|++++
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 228 (337)
T 1r6d_A 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA 228 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence 9999999999999998766678999999999999985 23445555554332222 7999999999999
Q ss_pred HHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-C-CCHHHH
Q 005818 581 EMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-L-LSIKES 657 (676)
Q Consensus 581 ~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~-~~~~~~ 657 (676)
.+++++. +++||+++++++|+.|+++.+.+.+|.+.+....... .........+|++|+++.++| + .+|+++
T Consensus 229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~ 303 (337)
T 1r6d_A 229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD-----RKGHDLRYSLDGGKIERELGYRPQVSFADG 303 (337)
T ss_dssp HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC-----CTTCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCC-----CCCCcceeecCHHHHHHHcCCCCCCCHHHH
Confidence 9998764 4599999999999999999999999976432111100 000111345899999875554 4 489999
Q ss_pred HHHhhhccCC
Q 005818 658 LIKNVFEPNK 667 (676)
Q Consensus 658 l~~~~~~~~~ 667 (676)
|++++..+.+
T Consensus 304 l~~~~~~~~~ 313 (337)
T 1r6d_A 304 LARTVRWYRE 313 (337)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9998876543
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=297.81 Aligned_cols=284 Identities=15% Similarity=0.144 Sum_probs=209.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|+++ +++|++++|..... +.+.+|+.+. +.+++ .++|+||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~--------------~~v~~d~~~~--~~~~l--~~~D~Vi 206 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKP--------------GKRFWDPLNP--ASDLL--DGADVLV 206 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCT--------------TCEECCTTSC--CTTTT--TTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCc--------------cceeecccch--hHHhc--CCCCEEE
Confidence 689999999999999999999999 68999999865321 1267787653 33444 6899999
Q ss_pred EccccCCcC-CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccC-CCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 87 HFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYG-ETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 87 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg-~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|+|+..... .+..++..+++.|+.++.+|++++.....+++|||+||.++|| .....+ ..|+.+. |.+.|+.+|
T Consensus 207 h~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~---~~E~~~~-~~~~y~~~~ 282 (516)
T 3oh8_A 207 HLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI---LTEESES-GDDFLAEVC 282 (516)
T ss_dssp ECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE---ECTTSCC-CSSHHHHHH
T ss_pred ECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc---cCCCCCC-CcChHHHHH
Confidence 999986542 2344567889999999999999944333489999999999999 333222 2555555 788999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
...|.++.. ....|++++++||++|||++. .++..+...+..+.. ..++++.+.++|+|++|+|++++.+++++.
T Consensus 283 ~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~---~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 357 (516)
T 3oh8_A 283 RDWEHATAP-ASDAGKRVAFIRTGVALSGRG---GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ 357 (516)
T ss_dssp HHHHHTTHH-HHHTTCEEEEEEECEEEBTTB---SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHH-HHhCCCCEEEEEeeEEECCCC---ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence 999988764 456799999999999999985 566666666555543 356888999999999999999999999877
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCC-CC--------CCcccccCHHHHHhCCCcccCC-HHHHHH
Q 005818 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR-PF--------NDQRYFLDVQKLKQLGWYERVT-WEEGLQ 314 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~--------~~~~~~~~~~k~~~lg~~~~~~-~~~~l~ 314 (676)
.+++||+++++++|+.|+++.+++.+|.+....++..... .. ......++.+|+++|||+|+++ ++++|+
T Consensus 358 ~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~ 437 (516)
T 3oh8_A 358 ISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIA 437 (516)
T ss_dssp CCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHH
T ss_pred cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHH
Confidence 7789999999999999999999999987653222211100 00 1123456888999999999986 999999
Q ss_pred HHHHH
Q 005818 315 KTMKW 319 (676)
Q Consensus 315 ~~~~~ 319 (676)
++++.
T Consensus 438 ~~l~~ 442 (516)
T 3oh8_A 438 HELGY 442 (516)
T ss_dssp HHHTC
T ss_pred HHhCc
Confidence 98753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=287.33 Aligned_cols=263 Identities=19% Similarity=0.229 Sum_probs=202.4
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCceeecc-----------------------ccCCChHHHHHHhhccCCCEEEE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK-----------------------GRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~-----------------------~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
..+|+|+|||||||||++|+++|+++|++|..+. +|+.+. .+. ++|+|||
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~d~vih 97 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYI--EVDQIYH 97 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCC--CCSEEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhc--CCCEEEE
Confidence 4567999999999999999999999998774432 233332 123 3599999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccC-----CCCCCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEED-----KPNFTG 513 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~-----~~~~p~ 513 (676)
+|+.. ....+..++...+++|+.++.+++++|++.++++|++||..+|+.....+ .+|+ .+..|.
T Consensus 98 ~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~-------~~E~~~~~~~~~~~~ 167 (343)
T 2b69_A 98 LASPA---SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHP-------QSEDYWGHVNPIGPR 167 (343)
T ss_dssp CCSCC---SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSS-------BCTTCCCBCCSSSTT
T ss_pred Ccccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCC-------CcccccccCCCCCCC
Confidence 99976 34444567778899999999999999999999999999999997654333 3333 456677
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH----------HHHHHHHhcCceeccCC-----CccchhhHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTILDELLPI 578 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~ 578 (676)
+.|+.+|+.+|++++.+.+..+++++++||+++|||. .++.++..+......++ +|+|++|+|++
T Consensus 168 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a 247 (343)
T 2b69_A 168 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 247 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHH
Confidence 8899999999999988766678999999999999984 34555666665433322 79999999999
Q ss_pred HHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCC-C-CCHHH
Q 005818 579 SVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPE-L-LSIKE 656 (676)
Q Consensus 579 ~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~-~-~~~~~ 656 (676)
++.+++.+.+++||+++++++|+.|+++.+.+.+|.+..+..++.... ......+|++|+++.++| + .+|++
T Consensus 248 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~------~~~~~~~d~~k~~~~lG~~p~~~l~e 321 (343)
T 2b69_A 248 LVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD------DPQKRKPDIKKAKLMLGWEPVVPLEE 321 (343)
T ss_dssp HHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTT------CCCCCCBCCHHHHHHHCCCCCSCHHH
T ss_pred HHHHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCC------CCceecCCHHHHHHHcCCCCCCCHHH
Confidence 999998777789999999999999999999999998765544432111 112456899999876555 4 48999
Q ss_pred HHHHhhhccCC
Q 005818 657 SLIKNVFEPNK 667 (676)
Q Consensus 657 ~l~~~~~~~~~ 667 (676)
+|++++..+.+
T Consensus 322 ~l~~~~~~~~~ 332 (343)
T 2b69_A 322 GLNKAIHYFRK 332 (343)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998875543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=284.43 Aligned_cols=267 Identities=13% Similarity=0.133 Sum_probs=205.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------------eccccCCChHHHHHHhhccC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------------YGKGRLENRSQLLADIQNVK 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------------~~~~Dl~d~~~~~~~~~~~~ 432 (676)
+|+|+|||||||||++|+++|+++|++|. ++.+|++|.+.+.++++..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 47899999999999999999999998763 24579999999999998444
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
+|+|||+|+.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+..
T Consensus 82 ~d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~E~~~~~ 151 (348)
T 1ek6_A 82 FMAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP-------LDEAHPTG 151 (348)
T ss_dssp EEEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS-------BCTTSCCC
T ss_pred CCEEEECCCCc---CccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCC-------cCCCCCCC
Confidence 59999999966 33444567788999999999999999999886 788999999997544333 55555666
Q ss_pred C-CCchhhhHHHHHHHHHHccCeEE--EEeeecccCCCCChH--------------HHH---HHHHh--cCceeccC---
Q 005818 512 T-GSFYSKTKAMVEELLKEYDNVCT--LRVRMPISSDLNNPR--------------NFI---TKISR--YNKVVNIP--- 566 (676)
Q Consensus 512 p-~~~Y~~sK~~~E~~~~~~~~~~~--l~~~~~r~~~~~g~~--------------~~~---~~~~~--~~~~~~~~--- 566 (676)
| .+.|+.+|+.+|++++.+.+. + ++++++|++++|||. .++ .+.+. +.....++
T Consensus 152 p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (348)
T 1ek6_A 152 GCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY 230 (348)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred CCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence 6 789999999999999987544 5 899999999999872 132 22332 22222211
Q ss_pred --------CCccchhhHHHHHHHHHhcC---CC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCC
Q 005818 567 --------NSMTILDELLPISVEMAKRN---LS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPR 634 (676)
Q Consensus 567 --------~~~~~v~D~a~~~~~~~~~~---~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 634 (676)
.+|+|++|+|++++.+++++ .+ ++||+++++++|+.|+++.+.+.+|.+.++...+.. ....
T Consensus 231 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~ 304 (348)
T 1ek6_A 231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR------EGDV 304 (348)
T ss_dssp SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC------TTCC
T ss_pred cCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC------Cccc
Confidence 18999999999999999764 23 699999999999999999999999987654333211 0111
Q ss_pred CccccChhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 635 SNNELDASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 635 ~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
....+|++|+++.++|. .+|+++|++++..+.+
T Consensus 305 ~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~ 339 (348)
T 1ek6_A 305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339 (348)
T ss_dssp SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred hhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHh
Confidence 24568999998766654 4899999999876654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=284.67 Aligned_cols=268 Identities=12% Similarity=0.147 Sum_probs=208.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC-Cceee-----------------ccccCCChHHHHHHhhcc---CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG-IPFEY-----------------GKGRLENRSQLLADIQNV---KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g-~~v~~-----------------~~~Dl~d~~~~~~~~~~~---~~d~Vih~a~~ 442 (676)
+|+|+|||||||||++|+++|+++| ++|.. +.+|++|.+.+++++++. ++|+|||+|+.
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 125 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 125 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCcc
Confidence 4789999999999999999999999 77632 336778888888888741 35999999996
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHH
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 522 (676)
. .. +..++...+++|+.++.+++++|++.++++|++||..+|+.....+ .+|+.+..|.+.|+.+|..
T Consensus 126 ~---~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~-------~~E~~~~~p~~~Y~~sK~~ 193 (357)
T 2x6t_A 126 S---ST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVFGYSKFL 193 (357)
T ss_dssp C---CT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCC-------CSSGGGCCCSSHHHHHHHH
T ss_pred c---CC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCC-------cCCcCCCCCCChhHHHHHH
Confidence 5 22 3456778899999999999999999888999999999987543333 5566677788999999999
Q ss_pred HHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceecc------CCCccchhhHHHHHHHHHh
Q 005818 523 VEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNI------PNSMTILDELLPISVEMAK 584 (676)
Q Consensus 523 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~------~~~~~~v~D~a~~~~~~~~ 584 (676)
+|++++.+.+..+++++++||+++|||. .++..+..+...... ..+|+|++|+|++++.+++
T Consensus 194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~ 273 (357)
T 2x6t_A 194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273 (357)
T ss_dssp HHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh
Confidence 9999999876678999999999999984 233444555443222 2378999999999999998
Q ss_pred cCCCceeEccCCCcccHHHHHHHHHhhcCCC-CcccccchHhhhhHhccCCCccccChhHHHhhCC-CC-CCHHHHHHHh
Q 005818 585 RNLSGIWNFTNPGVVSHNEILEMYKAYIDPG-FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFP-EL-LSIKESLIKN 661 (676)
Q Consensus 585 ~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~-~~-~~~~~~l~~~ 661 (676)
++.+++||+++++.+|+.|+++.+.+.+|.+ +.+.+.+... ......+..+|++|+++++| .+ ++|+++|+++
T Consensus 274 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~ 349 (357)
T 2x6t_A 274 NGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL----KGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEY 349 (357)
T ss_dssp HCCCEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG----TTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHH
T ss_pred cCCCCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc----ccccccccccCHHHHHHcCCCCCCCCHHHHHHHH
Confidence 7667799999999999999999999999986 3333333211 01111256789999998766 24 6999999999
Q ss_pred hhccCC
Q 005818 662 VFEPNK 667 (676)
Q Consensus 662 ~~~~~~ 667 (676)
+..+.+
T Consensus 350 ~~~~~~ 355 (357)
T 2x6t_A 350 MAWLNR 355 (357)
T ss_dssp HHHHC-
T ss_pred HHHHhh
Confidence 876654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=289.87 Aligned_cols=269 Identities=19% Similarity=0.155 Sum_probs=208.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|+||||||+||||++|++.|+++|++| .++.+|++|.+.+.++++++++|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999755 24467999999999999987889
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC------cEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL------LMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~------~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.. ....+..++...+++|+.++.+++++|.+.++ ++|++||..+|+.... + .+|+.
T Consensus 109 ~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~-------~~E~~ 177 (381)
T 1n7h_A 109 EVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-P-------QSETT 177 (381)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-S-------BCTTS
T ss_pred EEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-C-------CCCCC
Confidence 999999976 44444567788899999999999999998764 7899999999975433 3 55666
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---H--------HHHHHHhcCce-eccC-----CCccc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N--------FITKISRYNKV-VNIP-----NSMTI 571 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~--------~~~~~~~~~~~-~~~~-----~~~~~ 571 (676)
+..|.+.|+.+|+.+|.+++.+.+.++++++++|+.++|||+ . ++..+..+... ...+ .+|+|
T Consensus 178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~ 257 (381)
T 1n7h_A 178 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 257 (381)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence 777889999999999999998866678888999999999984 1 22334444332 2222 27999
Q ss_pred hhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcc-cccchHhhhhHhccCCCccccChhHHHhhCCC
Q 005818 572 LDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKW-TNFTLEEQAKVIVAPRSNNELDASKLKKEFPE 650 (676)
Q Consensus 572 v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~ 650 (676)
++|+|++++.+++++..++||+++++.+|+.|+++.+.+.+|.+... ..+..... .........+|++|++++++|
T Consensus 258 v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~~lG~ 334 (381)
T 1n7h_A 258 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF---RPAEVDNLQGDASKAKEVLGW 334 (381)
T ss_dssp HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS---CSSCCCBCCBCCHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccC---CccccccccCCHHHHHHhcCC
Confidence 99999999999998777999999999999999999999999975321 11211100 011112456799999885555
Q ss_pred C--CCHHHHHHHhhhccCC
Q 005818 651 L--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 651 ~--~~~~~~l~~~~~~~~~ 667 (676)
. .+|+++|++++..+.+
T Consensus 335 ~p~~~l~e~l~~~~~~~~~ 353 (381)
T 1n7h_A 335 KPQVGFEKLVKMMVDEDLE 353 (381)
T ss_dssp CCCSCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHh
Confidence 4 4899999998875543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=288.00 Aligned_cols=274 Identities=18% Similarity=0.196 Sum_probs=210.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
||+|+||||+||||++|+++|+++|++| .++.+|++|++++.++++++++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 4789999999999999999999999755 24567999999999999987789
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|||+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+.
T Consensus 81 ~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~-------~~E~~~~ 150 (372)
T 1db3_A 81 EVYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP-------QKETTPF 150 (372)
T ss_dssp EEEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS-------BCTTSCC
T ss_pred EEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCC-------CCccCCC
Confidence 999999976 34445567778899999999999999999885 788999999997543333 5566677
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCc-eeccCC-----Cccchh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNK-VVNIPN-----SMTILD 573 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~-~~~~~~-----~~~~v~ 573 (676)
.|.+.|+.||..+|.+++.+.+.++++++++|++++|||. .++..+..+.. ....++ +|+|++
T Consensus 151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 230 (372)
T 1db3_A 151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (372)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence 7889999999999999998876678889999999999884 12333444442 222222 899999
Q ss_pred hHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccc--cch---------------------HhhhhHh
Q 005818 574 ELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTN--FTL---------------------EEQAKVI 630 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~---------------------~~~~~~~ 630 (676)
|+|++++.+++++.+++||+++++++|+.|+++.+.+.+|.+.++.. ++. ....+..
T Consensus 231 Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1db3_A 231 DYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY 310 (372)
T ss_dssp HHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGG
T ss_pred HHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccc
Confidence 99999999998877789999999999999999999999987543211 110 0000110
Q ss_pred ccCC--CccccChhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 631 VAPR--SNNELDASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 631 ~~~~--~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
..+. ....+|++|+++.++|. .+|+++|++++..+.+
T Consensus 311 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 351 (372)
T 1db3_A 311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351 (372)
T ss_dssp CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred cCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHH
Confidence 1111 14567999998755554 4899999999876544
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=288.99 Aligned_cols=269 Identities=13% Similarity=0.063 Sum_probs=202.8
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCcee-----------------------------------------eccccCCC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPFE-----------------------------------------YGKGRLEN 420 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-----------------------------------------~~~~Dl~d 420 (676)
..||+|||||||||||++|+++|+++|++|. ++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 3467999999999999999999999998663 34579999
Q ss_pred hHHHHHHhhccCCCEEEECccccCCCCcchhccchh---hHHhhhhhhHHHHHHHHHHcCC--cEEEeecCeeeecCCCC
Q 005818 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKP---ETIRTNVVGTLTLADVCRENGL--LMMNYATGCIFEYDAKH 495 (676)
Q Consensus 421 ~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~---~~~~~Nv~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~ 495 (676)
++.+.+++++.++|+|||+||.. ....+..++. ..+++|+.|+.+++++|++.++ ++|++||..+|+... .
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~---~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~ 164 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-I 164 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-S
T ss_pred HHHHHHHHhccCCCEEEECCCCC---CccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-C
Confidence 99999999985669999999966 3333334443 4789999999999999999884 788999988887542 2
Q ss_pred CCCCCCCcccc-------------CCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------
Q 005818 496 PEGTGIGFKEE-------------DKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------ 550 (676)
Q Consensus 496 ~~~~~~~~~~e-------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------ 550 (676)
+ +.|+ ..+..|.+.|+.||+.+|++++.+.+.++++++++||+++|||.
T Consensus 165 ~------~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~ 238 (404)
T 1i24_A 165 D------IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN 238 (404)
T ss_dssp C------BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred C------CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccc
Confidence 2 2221 03566778999999999999988765668999999999999984
Q ss_pred -------------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcCC--C--ceeEccCCCcccHHHHHHHH
Q 005818 551 -------------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRNL--S--GIWNFTNPGVVSHNEILEMY 608 (676)
Q Consensus 551 -------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~--~--g~yn~~~~~~~s~~e~~~~i 608 (676)
.++.++..+......++ +|+|++|+|++++.+++++. + ++||+++ +++|+.|+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i 317 (404)
T 1i24_A 239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLV 317 (404)
T ss_dssp CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHH
Confidence 24555566655433222 89999999999999998763 3 4999998 899999999999
Q ss_pred Hhh---cCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 609 KAY---IDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 609 ~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
.+. +|.+..+...+.... ........+|++|+++++|.+ .++++++++++..+
T Consensus 318 ~~~~~~~g~~~~~~~~p~~~~----~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~ 374 (404)
T 1i24_A 318 TKAGSKLGLDVKKMTVPNPRV----EAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFA 374 (404)
T ss_dssp HHHHHTTTCCCCEEEECCSSC----SCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHhhCCCccccccCcccC----ccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHH
Confidence 998 777655433332110 011124567999998765555 47899998877644
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=281.85 Aligned_cols=270 Identities=13% Similarity=0.097 Sum_probs=203.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
++|+|+|||||||||++|+++|+++|++| .++.+|++|++.+.++++++ |+|||+|+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~a~~~- 88 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGL--DGVIFSAGYY- 88 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTC--SEEEEC-----
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCC--CEEEECCccC-
Confidence 34799999999999999999999999765 35678999999999999876 9999999965
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC----CCchhhh
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT----GSFYSKT 519 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p----~~~Y~~s 519 (676)
. .+..++...+++|+.++.+++++|.+.++ ++|++||..+|+..... ... +|+.+..| .+.|+.+
T Consensus 89 --~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~-----~~~-~E~~~~~p~~~~~~~Y~~s 158 (342)
T 2x4g_A 89 --P--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQG-----LPG-HEGLFYDSLPSGKSSYVLC 158 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTS-----SCB-CTTCCCSSCCTTSCHHHHH
T ss_pred --c--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCC-----CCC-CCCCCCCccccccChHHHH
Confidence 2 23456778899999999999999999986 78899999998654221 112 56667777 7899999
Q ss_pred HHHHHHHHHHccCeEEEEeeecccCCCCChHH-------HHHHHHhcCceec--cCCCccchhhHHHHHHHHHhcCC-Cc
Q 005818 520 KAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKISRYNKVVN--IPNSMTILDELLPISVEMAKRNL-SG 589 (676)
Q Consensus 520 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~--~~~~~~~v~D~a~~~~~~~~~~~-~g 589 (676)
|+.+|++++.+.+. +++++++||+++|||.. ++..+..+..... ...+|+|++|+|++++.+++++. ++
T Consensus 159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~ 237 (342)
T 2x4g_A 159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGE 237 (342)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCc
Confidence 99999999987544 89999999999999743 4555555544322 12279999999999999998764 56
Q ss_pred eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhh--------------------Hhcc-CCCccccChhHHHhhC
Q 005818 590 IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAK--------------------VIVA-PRSNNELDASKLKKEF 648 (676)
Q Consensus 590 ~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~ld~~k~~~~~ 648 (676)
+||+++++ +|+.|+++.+.+.+|.+..+ .++...... .... ......+|++|+++.+
T Consensus 238 ~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 315 (342)
T 2x4g_A 238 RYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREEL 315 (342)
T ss_dssp EEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHH
T ss_pred eEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhC
Confidence 99999999 99999999999999988766 555432110 0000 0125678999998855
Q ss_pred CC--CCCHHHHHHHhhhccCCC
Q 005818 649 PE--LLSIKESLIKNVFEPNKK 668 (676)
Q Consensus 649 ~~--~~~~~~~l~~~~~~~~~~ 668 (676)
+| +++|+++|++++..+.+.
T Consensus 316 G~~~p~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 316 GFFSTTALDDTLLRAIDWFRDN 337 (342)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHc
Confidence 55 479999999998776554
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=282.61 Aligned_cols=272 Identities=13% Similarity=0.135 Sum_probs=204.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCce-------------------eeccccCCC-hHHHHHHhhccCCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------EYGKGRLEN-RSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~Dl~d-~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
|+|+|||||||||++|+++|+++ |++| .++.+|++| .+.+.++++++ |+|||+||..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--d~vih~A~~~ 78 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVAIA 78 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHC--SEEEECBCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCC--CEEEEccccc
Confidence 58999999999999999999998 7755 456789998 45688888877 9999999976
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCC------CCCCCchh
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP------NFTGSFYS 517 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~------~~p~~~Y~ 517 (676)
....+..++...+++|+.++.+++++|++.+.++|++||..+|+.....+ +.|++.+ ..|.+.|+
T Consensus 79 ---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~------~~e~~~~~~~~~~~~~~~~Y~ 149 (345)
T 2bll_A 79 ---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY------FDEDHSNLIVGPVNKPRWIYS 149 (345)
T ss_dssp ---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSS------BCTTTCCCBCCCTTCGGGHHH
T ss_pred ---CccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCC------cCCcccccccCcccCcccccH
Confidence 33344567778899999999999999999887889999999997654333 3333321 13456899
Q ss_pred hhHHHHHHHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCceeccCC-----CccchhhHH
Q 005818 518 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIPN-----SMTILDELL 576 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a 576 (676)
.+|..+|++++.+.+..+++++++||+++|||. .++..+..+......++ +|+|++|+|
T Consensus 150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 229 (345)
T 2bll_A 150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 229 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHH
Confidence 999999999988766678999999999999984 23445555655433221 799999999
Q ss_pred HHHHHHHhcCC----CceeEccCCC-cccHHHHHHHHHhhcCCCCcccccchHh---------hhhHhccCCCccccChh
Q 005818 577 PISVEMAKRNL----SGIWNFTNPG-VVSHNEILEMYKAYIDPGFKWTNFTLEE---------QAKVIVAPRSNNELDAS 642 (676)
Q Consensus 577 ~~~~~~~~~~~----~g~yn~~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~ld~~ 642 (676)
++++.+++++. +++||+++++ .+|+.|+++.+.+.+|.+.....++... +............+|++
T Consensus 230 ~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 309 (345)
T 2bll_A 230 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR 309 (345)
T ss_dssp HHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCH
T ss_pred HHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHH
Confidence 99999998752 4699999996 8999999999999998764433322110 00000001124578999
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
|+++.++|. .+|+++|++++..+.+
T Consensus 310 k~~~~lG~~p~~~l~~~l~~~~~~~~~ 336 (345)
T 2bll_A 310 NAHRCLDWEPKIDMQETIDETLDFFLR 336 (345)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccccHHHHHHHHHHHHHH
Confidence 998755554 4899999999876654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=278.77 Aligned_cols=266 Identities=13% Similarity=0.156 Sum_probs=196.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcC-Cceee-----------------ccccCCChHHHHHHhhcc---CCCEEEECccccC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKG-IPFEY-----------------GKGRLENRSQLLADIQNV---KPTHVFNAAGVTG 444 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g-~~v~~-----------------~~~Dl~d~~~~~~~~~~~---~~d~Vih~a~~~~ 444 (676)
+|+|||||||||++|+++|+++| ++|.. +.+|++|.+.+.+++++. ++|+|||+|+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~- 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS- 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC-
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc-
Confidence 48999999999999999999999 87732 346788888888888752 469999999965
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
.. +..++...+++|+.++.+++++|++.++++|++||..+|+.....+ .+|+.+..|.+.|+.+|..+|
T Consensus 80 --~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~-------~~E~~~~~p~~~Y~~sK~~~e 148 (310)
T 1eq2_A 80 --ST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVYGYSKFLFD 148 (310)
T ss_dssp --CT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB-------CSSGGGCCCSSHHHHHHHHHH
T ss_pred --cC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCC-------CCCCCCCCCCChhHHHHHHHH
Confidence 22 3567788899999999999999999888999999999987543323 556667778899999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceec-----c-CCCccchhhHHHHHHHHHhcC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVN-----I-PNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~-----~-~~~~~~v~D~a~~~~~~~~~~ 586 (676)
++++.+.+..+++++++||+++|||. .++..+..+..... . ..+|+|++|+|++++.+++++
T Consensus 149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~ 228 (310)
T 1eq2_A 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228 (310)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence 99999876678999999999999985 13344444443221 2 337899999999999999876
Q ss_pred CCceeEccCCCcccHHHHHHHHHhhcCCC-CcccccchHhhhhHhccCCCccccChhHHHhhCC-CC-CCHHHHHHHhhh
Q 005818 587 LSGIWNFTNPGVVSHNEILEMYKAYIDPG-FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFP-EL-LSIKESLIKNVF 663 (676)
Q Consensus 587 ~~g~yn~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~-~~-~~~~~~l~~~~~ 663 (676)
.+++||+++++++|+.|+++.+.+.+|.+ +...+.+... ......+..+|++|++++++ .+ ++|+++|++++.
T Consensus 229 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~ 304 (310)
T 1eq2_A 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL----KGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA 304 (310)
T ss_dssp CCEEEEESCSCCBCHHHHHHHC-------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHH
T ss_pred CCCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhh----hcccccccccchHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 67799999999999999999999999976 3222222210 01111256789999988766 24 699999999987
Q ss_pred ccCC
Q 005818 664 EPNK 667 (676)
Q Consensus 664 ~~~~ 667 (676)
.+.+
T Consensus 305 ~~~~ 308 (310)
T 1eq2_A 305 WLNR 308 (310)
T ss_dssp HTC-
T ss_pred HHHh
Confidence 6654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=279.88 Aligned_cols=267 Identities=17% Similarity=0.174 Sum_probs=201.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|+|+||||+||||++|+++|+++|++|. ++.+|++|++.+.+++++.++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 5899999999999999999999998662 355799999999999987567999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-CCchh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-GSFYS 517 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~~~Y~ 517 (676)
||.. .......++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ .+|+.+..| .+.|+
T Consensus 81 A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~e~~~~~~~~~~Y~ 150 (338)
T 1udb_A 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIP-------YVESFPTGTPQSPYG 150 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS-------BCTTSCCCCCSSHHH
T ss_pred CccC---ccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCC-------cCcccCCCCCCChHH
Confidence 9965 33334556778899999999999999998886 788889989987543333 445545433 78999
Q ss_pred hhHHHHHHHHHHccCeE-EEEeeecccCCCCChH-----------------HHHHHHHhc--Cceecc--------C---
Q 005818 518 KTKAMVEELLKEYDNVC-TLRVRMPISSDLNNPR-----------------NFITKISRY--NKVVNI--------P--- 566 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~-~l~~~~~r~~~~~g~~-----------------~~~~~~~~~--~~~~~~--------~--- 566 (676)
.||..+|++++.+.+.. +++++++|++++|||. .++.+...+ ...... +
T Consensus 151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 230 (338)
T 1udb_A 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCcee
Confidence 99999999998875444 7899999999888762 122223322 222111 1
Q ss_pred CCccchhhHHHHHHHHHhcC---CC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChh
Q 005818 567 NSMTILDELLPISVEMAKRN---LS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~---~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 642 (676)
.+|+|++|+|++++.++++. .+ ++||+++++++|+.|+++.+.+.+|.+.++...+.. ........+|++
T Consensus 231 ~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~ 304 (338)
T 1udb_A 231 RDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR------EGDLPAYWADAS 304 (338)
T ss_dssp ECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCC------TTCCSBCCBCCH
T ss_pred eeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCC------CCchhhhhcCHH
Confidence 18999999999999998763 22 599999999999999999999999976554322211 111124568999
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
|+++.++|. .+++++|++++..+.+
T Consensus 305 k~~~~lG~~p~~~l~~~l~~~~~w~~~ 331 (338)
T 1udb_A 305 KADRELNWRVTRTLDEMAQDTWHWQSR 331 (338)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCCHHHHHHHHHHHHHh
Confidence 997755554 4899999998865543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.8e-32 Score=275.99 Aligned_cols=268 Identities=15% Similarity=0.150 Sum_probs=200.0
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
..||+|+|||||||||++|+++|+++|++| .++.+|++|++.+.+++++.++|+|||+||
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 456899999999999999999999999765 246689999999999998845599999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC-Cchhhh
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG-SFYSKT 519 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~-~~Y~~s 519 (676)
.. ... +..++. +++|+.++.+++++|.+.++ ++|++||..+|+.....+ ..++ +|+. .|. +.|+.+
T Consensus 99 ~~---~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~---~~~~-~E~~--~p~~~~Y~~s 166 (333)
T 2q1w_A 99 SY---KDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQ---PVRL-DHPR--NPANSSYAIS 166 (333)
T ss_dssp CC---SCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSS---SBCT-TSCC--CCTTCHHHHH
T ss_pred ec---CCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccC---CCCc-CCCC--CCCCCchHHH
Confidence 76 222 334444 89999999999999999887 788999999886211000 0123 3333 566 889999
Q ss_pred HHHHHHHHHH-ccCeEEEEeeecccCCCCChH-------HHHHHHHhcCceec--cCCCccchhhHHHHHHHHHhcCCCc
Q 005818 520 KAMVEELLKE-YDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVN--IPNSMTILDELLPISVEMAKRNLSG 589 (676)
Q Consensus 520 K~~~E~~~~~-~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~--~~~~~~~v~D~a~~~~~~~~~~~~g 589 (676)
|..+|++++. +. +++++|++++|||. .++..+..+..... ...+++|++|+|++++.+++.+.++
T Consensus 167 K~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~g~ 241 (333)
T 2q1w_A 167 KSANEDYLEYSGL-----DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGHG 241 (333)
T ss_dssp HHHHHHHHHHHTC-----CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHhhhC-----CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCCCC
Confidence 9999999988 75 67889999999886 23444444442221 1238999999999999999876667
Q ss_pred eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccCCC
Q 005818 590 IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 590 ~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~~ 668 (676)
+||+++++.+|+.|+++.+.+.+|.+ .+..++... ...........+|++|+++++|.+ .+|+++|++++..+.+.
T Consensus 242 ~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 318 (333)
T 2q1w_A 242 AYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRE--LGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREY 318 (333)
T ss_dssp EEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE--CCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCC--cccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 443333211 000001125678999999984444 58999999998876654
Q ss_pred C
Q 005818 669 P 669 (676)
Q Consensus 669 ~ 669 (676)
.
T Consensus 319 ~ 319 (333)
T 2q1w_A 319 G 319 (333)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-32 Score=287.20 Aligned_cols=274 Identities=12% Similarity=0.093 Sum_probs=206.6
Q ss_pred cEEEEEcCCcchhHHHHHHHH-HcCCce-----------------------------------------eeccccCCChH
Q 005818 385 LKFLIYGRTGWIGGLLSKICE-KKGIPF-----------------------------------------EYGKGRLENRS 422 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~-~~g~~v-----------------------------------------~~~~~Dl~d~~ 422 (676)
|+||||||+||||++|+++|+ ++|++| .++.+|++|++
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 689999999999999999999 888754 33557999999
Q ss_pred HHHHHhhccC-CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCC-CCC
Q 005818 423 QLLADIQNVK-PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHP-EGT 499 (676)
Q Consensus 423 ~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~-~~~ 499 (676)
.+.++++... +|+|||+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+...... ...
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~ 159 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN 159 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred HHHHHHHhcCCCCEEEECCCcc---CcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccc
Confidence 9999998443 69999999976 33334567788999999999999999999887 788899989987543100 000
Q ss_pred CCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-------------HHHH--------HHHh
Q 005818 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-------------NFIT--------KISR 558 (676)
Q Consensus 500 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-------------~~~~--------~~~~ 558 (676)
.. ..+|+.+..|.+.|+.||+.+|++++.+.+.++++++++||+++|||. .++. ++..
T Consensus 160 ~~-~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 160 AE-PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CC-CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cc-CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 11 255666777889999999999999998866668999999999999873 2333 3333
Q ss_pred cCc------------eeccC--------C---CccchhhHHHHHHHHHhcC--C-----C---ceeEccCCCcccHHHHH
Q 005818 559 YNK------------VVNIP--------N---SMTILDELLPISVEMAKRN--L-----S---GIWNFTNPGVVSHNEIL 605 (676)
Q Consensus 559 ~~~------------~~~~~--------~---~~~~v~D~a~~~~~~~~~~--~-----~---g~yn~~~~~~~s~~e~~ 605 (676)
+.. ...++ . +|+|++|+|++++.+++++ . . ++||+++++++|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 331 21111 1 8999999999999998764 2 2 79999999999999999
Q ss_pred HHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-C--CHHHHHHHhhhccCCC
Q 005818 606 EMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-L--SIKESLIKNVFEPNKK 668 (676)
Q Consensus 606 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~--~~~~~l~~~~~~~~~~ 668 (676)
+.+.+.+|.+.++...+.. ........+|++|+++.++|. . +|+++|++++..+.+.
T Consensus 319 ~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 319 EVARKTTGHPIPVRECGRR------EGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp HHHHHHHCCCCCEEEECCC------TTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCCeeeCCCC------CCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999987654332211 111125678999998766554 3 8999999998766543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-32 Score=283.83 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=207.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCce------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK-GIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~-g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
||||||||+||||++|+++|+++ |++| .++.+|++|.+.+.++++..++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 58999999999999999999998 6654 3456899999999999984456999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--CC--------cEEEeecCeeeecCCCC-C--CCCCCCcccc
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--GL--------LMMNYATGCIFEYDAKH-P--EGTGIGFKEE 506 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~--------~~v~~sS~~v~~~~~~~-~--~~~~~~~~~e 506 (676)
||.. ....+..++...+++|+.|+.+++++|.+. ++ ++|++||..+|+..... . ........+|
T Consensus 81 A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E 157 (361)
T 1kew_A 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred CCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence 9976 344455677889999999999999999987 74 78899999998753210 0 0000012455
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCC-----Cccchh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPN-----SMTILD 573 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~-----~~~~v~ 573 (676)
+.+..|.+.|+.||..+|.+++.+.+.++++++++||+++|||.. ++..+..+.....+++ +++|++
T Consensus 158 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 667778899999999999999988666689999999999999852 3445555554332222 799999
Q ss_pred hHHHHHHHHHhcCCC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhh-hhHhccC--CCccccChhHHHhhCC
Q 005818 574 ELLPISVEMAKRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQ-AKVIVAP--RSNNELDASKLKKEFP 649 (676)
Q Consensus 574 D~a~~~~~~~~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~--~~~~~ld~~k~~~~~~ 649 (676)
|+|++++.+++++.. ++||+++++++|+.|+++.+++.+|.+.+... +.... ......+ .....+|++|+++.++
T Consensus 238 Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 316 (361)
T 1kew_A 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYREQITYVADRPGHDRRYAIDAGKISRELG 316 (361)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGGGGEEEECCCTTCCCBCCBCCHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccccceeecCCCCcccceeecCHHHHHHHhC
Confidence 999999999987644 59999999999999999999999986432211 10000 0000011 1135689999988555
Q ss_pred CC--CCHHHHHHHhhhccCC
Q 005818 650 EL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 650 ~~--~~~~~~l~~~~~~~~~ 667 (676)
|. .+|+++|++++..+.+
T Consensus 317 ~~p~~~~~e~l~~~~~~~~~ 336 (361)
T 1kew_A 317 WKPLETFESGIRKTVEWYLA 336 (361)
T ss_dssp CCCSCCHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHh
Confidence 54 4899999999876543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=273.39 Aligned_cols=269 Identities=16% Similarity=0.186 Sum_probs=202.5
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
....|+|+||||+||||++|+++|+++|++| .++.+|++|.+++.++++..++|+|||+|
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 96 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence 3445799999999999999999999999765 24568999999999999844459999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
|.. ... +..++. +++|+.++.+++++|.+.++ ++|++||..+|+..... ..+ .+|+. .|.+.|+.+
T Consensus 97 ~~~---~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~----~~~-~~E~~--~~~~~Y~~s 163 (330)
T 2pzm_A 97 AAY---KDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATV----PIP-IDSPT--APFTSYGIS 163 (330)
T ss_dssp CCC---SCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSS----SBC-TTCCC--CCCSHHHHH
T ss_pred ccC---CCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccC----CCC-cCCCC--CCCChHHHH
Confidence 976 222 334444 89999999999999999887 78899999988643221 002 33333 566899999
Q ss_pred HHHHHHHHHHccCeEEEEeeecccCCCCChH---HH----HHHHHhcCceecc--CCCccchhhHHH-HHHHHHhcCCCc
Q 005818 520 KAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NF----ITKISRYNKVVNI--PNSMTILDELLP-ISVEMAKRNLSG 589 (676)
Q Consensus 520 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~----~~~~~~~~~~~~~--~~~~~~v~D~a~-~~~~~~~~~~~g 589 (676)
|+.+|++++.+ +++.+++|++++|||+ .+ +..+..+.....- ..+++|++|+|+ +++.+++.+.++
T Consensus 164 K~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~g~ 239 (330)
T 2pzm_A 164 KTAGEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTG 239 (330)
T ss_dssp HHHHHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCCCE
T ss_pred HHHHHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCCCC
Confidence 99999999876 6788899999999885 23 3334444321111 247899999999 999998765567
Q ss_pred eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHH-----HhhCCCC-CCHHHHHHHhhh
Q 005818 590 IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKL-----KKEFPEL-LSIKESLIKNVF 663 (676)
Q Consensus 590 ~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~-----~~~~~~~-~~~~~~l~~~~~ 663 (676)
+||+++++.+|+.|+++.+.+.+|.+ .+...+... ......+|++|+ ++++|.+ .+|+++|++++.
T Consensus 240 ~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-------~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~ 311 (330)
T 2pzm_A 240 VFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA-------PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLA 311 (330)
T ss_dssp EEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC-------CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc-------chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHH
Confidence 99999999999999999999999987 443333211 112456778877 8866555 599999999998
Q ss_pred ccCCCCCCCCC
Q 005818 664 EPNKKPTFGGV 674 (676)
Q Consensus 664 ~~~~~~~~~~~ 674 (676)
.+.+...+.++
T Consensus 312 ~~~~~~~~~~~ 322 (330)
T 2pzm_A 312 WYDKYGVTDIF 322 (330)
T ss_dssp HHHHHCSCSCC
T ss_pred HHHhhCccccc
Confidence 77665555444
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=271.67 Aligned_cols=272 Identities=15% Similarity=0.133 Sum_probs=204.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHc--CCcee-------------eccccCCChHHHHHHhhccCCCEEEECccccCCCCcch
Q 005818 386 KFLIYGRTGWIGGLLSKICEKK--GIPFE-------------YGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDW 450 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~--g~~v~-------------~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 450 (676)
+|+||||+||||++|+++|+++ |++|. ++.+|++|++.+.++++..++|+|||+|+.. .. .
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~~-~ 76 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL---SA-K 76 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC---HH-H
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCccc---CC-c
Confidence 4999999999999999999999 77662 4568999999999999855569999999965 21 2
Q ss_pred hccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHH
Q 005818 451 CETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKE 529 (676)
Q Consensus 451 ~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~ 529 (676)
+..++...+++|+.++.+++++|++.++ ++|++||..+|+..... ...+|+.+..|.+.|+.||..+|++++.
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 150 (317)
T 3ajr_A 77 GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPK------NKVPSITITRPRTMFGVTKIAAELLGQY 150 (317)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCS------SSBCSSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCC------CCccccccCCCCchHHHHHHHHHHHHHH
Confidence 3456778899999999999999999987 78889999999753211 1256667778889999999999999988
Q ss_pred ccCeEEEEeeecccCCCCChH--------H----HHHHHHhcCceeccC-----CCccchhhHHHHHHHHHhcCC-----
Q 005818 530 YDNVCTLRVRMPISSDLNNPR--------N----FITKISRYNKVVNIP-----NSMTILDELLPISVEMAKRNL----- 587 (676)
Q Consensus 530 ~~~~~~l~~~~~r~~~~~g~~--------~----~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~----- 587 (676)
+.+..+++++++|++++||+. . .+.+.+..+.....+ .+|+|++|+|++++.+++++.
T Consensus 151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 766678999999999999852 1 223333344332222 288999999999999998753
Q ss_pred CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhcc
Q 005818 588 SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEP 665 (676)
Q Consensus 588 ~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~ 665 (676)
+++||+++ +.+|+.|+++.+.+.+|. ..+...+... .. ........+|++|+++.++|. .+|+++|++++..+
T Consensus 231 g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~--~~-~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~ 305 (317)
T 3ajr_A 231 RNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFR--DK-IAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHI 305 (317)
T ss_dssp CSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHH--HH-HHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred CceEecCC-ccccHHHHHHHHHHHCCc-cccccccccc--hh-hccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 36999996 689999999999999883 2221111111 11 111113468999998765554 38999999998877
Q ss_pred CCCCCCC
Q 005818 666 NKKPTFG 672 (676)
Q Consensus 666 ~~~~~~~ 672 (676)
.+....+
T Consensus 306 ~~~~~~~ 312 (317)
T 3ajr_A 306 SEKLGIE 312 (317)
T ss_dssp HHHTTSS
T ss_pred Hhhhccc
Confidence 6543333
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=277.97 Aligned_cols=305 Identities=21% Similarity=0.196 Sum_probs=218.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCC-----------CCCCCCCeEEEEecCCCHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLN-----------PSRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~-----------~~~~~~~v~~v~~Dl~d~~~ 72 (676)
+.+|+|||||||||||++|++.|++. +++|++++|...... ...+. ......+++++.+|+.|++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 44679999999999999999999887 789999988753110 00000 00113589999999999888
Q ss_pred HHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC--cCCCCCC
Q 005818 73 VHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED--AVVGNHE 150 (676)
Q Consensus 73 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~e 150 (676)
+. .+ .++|+|||+|+.... ..++...+++|+.++.+++++|+. + +++|||+||.++ |..... ......|
T Consensus 145 l~-~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G~~~~~~~~~~~~~E 215 (427)
T 4f6c_A 145 VV-LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFSE 215 (427)
T ss_dssp CC-CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-GSEECSSCSCCEECT
T ss_pred CC-Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-CCCccCCCCCccccc
Confidence 77 33 799999999998753 245567889999999999999998 4 799999999998 543111 1112244
Q ss_pred CCC---CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-------ChHHHHHHHHHCCCCceeecCC
Q 005818 151 ASQ---LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 151 ~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
+++ ..|.+.|+.+|+.+|.+++.+++ .|++++++||++|||+..... .++..+++....+..++. +.+
T Consensus 216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (427)
T 4f6c_A 216 ADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMA 293 (427)
T ss_dssp TCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHH
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccc
Confidence 444 45789999999999999998764 699999999999999986432 346777777777766554 446
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec---CC-----------CC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE---NR-----------PF 286 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~---~~-----------~~ 286 (676)
++.++|++++|+|++++.+++.+..+++||+++++++++.|+++.+.+ ++.+......|.. .. ..
T Consensus 294 ~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 372 (427)
T 4f6c_A 294 EMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSVDR 372 (427)
T ss_dssp TCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhccc
Confidence 788999999999999999998877889999999999999999999987 5511000000000 00 00
Q ss_pred CCcccccCHHH----HHhCCCcccCCHHHHHHHHHHHHhhC
Q 005818 287 NDQRYFLDVQK----LKQLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 287 ~~~~~~~~~~k----~~~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
......+|.++ ++++||.+...-++.++++++++.+.
T Consensus 373 ~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 373 EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp TSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred cCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11234455554 34689988866677899999888864
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=266.33 Aligned_cols=267 Identities=14% Similarity=0.113 Sum_probs=194.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecccc-----CCChHHHHHHhhccCCCEEEECccccC-CCCcchhccchhhH
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR-----LENRSQLLADIQNVKPTHVFNAAGVTG-RPNVDWCETHKPET 458 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~D-----l~d~~~~~~~~~~~~~d~Vih~a~~~~-~~~~~~~~~~~~~~ 458 (676)
|||||||||||||++|+++|+++||+|..+.-+ +...+...+.++++ |+|||+|+... .+...+...+...+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~--d~vihla~~~i~~~~~~~~~~~~~~~ 78 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSC--DAAVNLAGENILNPLRRWNETFQKEV 78 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSC--SEEEECCCCCSSCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCC--CEEEEeccCcccchhhhhhhhhhhhh
Confidence 789999999999999999999999999765432 22223333456665 99999998531 11122334455678
Q ss_pred HhhhhhhHHHHHHHHHHcCC---cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEE
Q 005818 459 IRTNVVGTLTLADVCRENGL---LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCT 535 (676)
Q Consensus 459 ~~~Nv~g~~~ll~a~~~~~~---~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 535 (676)
++.|+.+|.+|+++|++.+. ++++.||+.+|+.....+ .+|+.|..+.+.|+..|...|.... ....+
T Consensus 79 ~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~-------~~E~~p~~~~~~~~~~~~~~e~~~~--~~~~~ 149 (298)
T 4b4o_A 79 LGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAE-------YDEDSPGGDFDFFSNLVTKWEAAAR--LPGDS 149 (298)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCC-------BCTTCCCSCSSHHHHHHHHHHHHHC--CSSSS
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCc-------ccccCCccccchhHHHHHHHHHHHH--hhccC
Confidence 89999999999999998875 356677778887654444 6677788887889988888887543 34568
Q ss_pred EEeeecccCCCCChH-HH---HHHHHhcCceeccC-----CCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHH
Q 005818 536 LRVRMPISSDLNNPR-NF---ITKISRYNKVVNIP-----NSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEIL 605 (676)
Q Consensus 536 l~~~~~r~~~~~g~~-~~---~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~ 605 (676)
++++++|++.+|||. .. +............+ .+|+||+|+|++++.+++++ ..|+||+++++++|..|++
T Consensus 150 ~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~ 229 (298)
T 4b4o_A 150 TRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFA 229 (298)
T ss_dssp SEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHH
T ss_pred CceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHH
Confidence 899999999999995 22 22222222222222 28999999999999999887 5689999999999999999
Q ss_pred HHHHhhcCCCCcccccchHhhh-------hHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhcc
Q 005818 606 EMYKAYIDPGFKWTNFTLEEQA-------KVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEP 665 (676)
Q Consensus 606 ~~i~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~ 665 (676)
+.+++.+|.+.. .++|..... ..... .+.+++++|++++|+.+ |+++++|++.+..+
T Consensus 230 ~~ia~~lgrp~~-~pvP~~~~~~~~g~~~~~~~l--~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~l 295 (298)
T 4b4o_A 230 QTFGAALGRRAF-IPLPSAVVQAVFGRQRAIMLL--EGQKVIPRRTLATGYQYSFPELGAALKEIAENL 295 (298)
T ss_dssp HHHHHHHTCCCC-CCBCHHHHHHHHCHHHHHHHH--CCCCBCCHHHHHTTCCCSCCSHHHHHHHHHHCC
T ss_pred HHHHHHhCcCCc-ccCCHHHHHHHhcchhHHHhh--CCCEEcHHHHHHCCCCCCCCCHHHHHHHHHHhh
Confidence 999999997653 455543211 11111 13467899999998876 79999999987654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=254.05 Aligned_cols=222 Identities=18% Similarity=0.152 Sum_probs=176.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
||+|||||||||||++|++.|+++ +++|++++|..... .....+++++.+|+.|++++.+++ .++|+||
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 72 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKI-------KIENEHLKVKKADVSSLDEVCEVC--KGADAVI 72 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGC-------CCCCTTEEEECCCTTCHHHHHHHH--TTCSEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccc-------hhccCceEEEEecCCCHHHHHHHh--cCCCEEE
Confidence 579999999999999999999999 68999999975321 111368999999999999999999 6899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+.... + ...++.|+.++.+++++|++.+ +++|||+||.++|+...+.. .++.+..|.++|+.+|..
T Consensus 73 ~~a~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~----~~~~~~~p~~~Y~~sK~~ 141 (227)
T 3dhn_A 73 SAFNPGWN-----N-PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLR----LMDSGEVPENILPGVKAL 141 (227)
T ss_dssp ECCCC------------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEE----GGGTTCSCGGGHHHHHHH
T ss_pred EeCcCCCC-----C-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCc----cccCCcchHHHHHHHHHH
Confidence 99986421 1 1366789999999999999987 89999999998886654433 345566788999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-C
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-V 245 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~ 245 (676)
+|.+++.++++++++++++||+.+||++.....+. .+....+.. +.. ++|+|++|+|++++.+++++. .
T Consensus 142 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~ 211 (227)
T 3dhn_A 142 GEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHH 211 (227)
T ss_dssp HHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCcccc
Confidence 99999988877899999999999999987543321 122233322 222 789999999999999999876 6
Q ss_pred CceEEEcCCCcccHH
Q 005818 246 GHVYNIGTKKERRVI 260 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~ 260 (676)
+++|+++++++.++.
T Consensus 212 g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 212 QERFTIGYLEHHHHH 226 (227)
T ss_dssp SEEEEEECCSCCC--
T ss_pred CcEEEEEeehhcccC
Confidence 889999999988764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=270.48 Aligned_cols=269 Identities=14% Similarity=0.072 Sum_probs=197.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcC-------Cce------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKG-------IPF------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g-------~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++|+|+||||+||||++|+++|+++| ++| .++.+|++|++.+.++++. ++|+||
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vi 91 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEA-RPDVIF 91 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHT-CCSEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhc-CCCEEE
Confidence 45799999999999999999999999 655 3466899999999998862 459999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC------CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG------LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~------~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||.. . ..+..++...+++|+.|+.+++++|++.+ .++|++||..+|+.....+ .+|+.+..
T Consensus 92 h~A~~~---~-~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~-------~~E~~~~~ 160 (342)
T 2hrz_A 92 HLAAIV---S-GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP-------IPDEFHTT 160 (342)
T ss_dssp ECCCCC---H-HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS-------BCTTCCCC
T ss_pred ECCccC---c-ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC-------cCCCCCCC
Confidence 999965 2 23456777889999999999999998875 4788999999987543333 55666777
Q ss_pred CCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCC-hH-----------HHHHHHHhcCceeccCC-----Cccchhh
Q 005818 512 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN-PR-----------NFITKISRYNKVVNIPN-----SMTILDE 574 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g-~~-----------~~~~~~~~~~~~~~~~~-----~~~~v~D 574 (676)
|.+.|+.||..+|++++.+.+..+++.+++|++++|| |. .++..+..+.......+ +++|++|
T Consensus 161 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 240 (342)
T 2hrz_A 161 PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHH
Confidence 8899999999999999887544456666666666665 32 23344445544321111 5789999
Q ss_pred HHHHHHHHHhcC-----CCceeEccCCCcccHHHHHHHHHhhcCCCCc--ccccchHhhhhHhccCCCccccChhHHHhh
Q 005818 575 LLPISVEMAKRN-----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFK--WTNFTLEEQAKVIVAPRSNNELDASKLKKE 647 (676)
Q Consensus 575 ~a~~~~~~~~~~-----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~ 647 (676)
+|++++.+++.+ ..++||++ ++.+|+.|+++.+.+.+|.+.. +...+....... .. .....+|++|++++
T Consensus 241 va~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~-~~~~~~d~~k~~~l 317 (342)
T 2hrz_A 241 AVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRM-CE-GWAPGFEAKRAREL 317 (342)
T ss_dssp HHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHH-HT-TSCCCBCCHHHHHT
T ss_pred HHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhh-hc-ccccccChHHHHHc
Confidence 999999999875 34699996 5789999999999999986531 211221111111 11 11236899999885
Q ss_pred CCCC-CCHHHHHHHhhhccC
Q 005818 648 FPEL-LSIKESLIKNVFEPN 666 (676)
Q Consensus 648 ~~~~-~~~~~~l~~~~~~~~ 666 (676)
+|.+ .+|+++|++++..+.
T Consensus 318 G~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 318 GFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp TCCCCSSHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHhc
Confidence 5544 589999999987764
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=267.30 Aligned_cols=240 Identities=24% Similarity=0.333 Sum_probs=196.7
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHc-CCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
.+|++|+||||||||+||++|+++|+++ |+ .+|++++|...... .+.......+++++.+|++|.+.+.+++ .+
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~~~~--~~~~~~~~~~v~~~~~Dl~d~~~l~~~~--~~ 91 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQS--EMAMEFNDPRMRFFIGDVRDLERLNYAL--EG 91 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHH--HHHHHHCCTTEEEEECCTTCHHHHHHHT--TT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChhhHH--HHHHHhcCCCEEEEECCCCCHHHHHHHH--hc
Confidence 4566799999999999999999999998 52 38888888642111 0000001257999999999999999998 68
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|+|||+|+.........++.+.+++|+.|+.+++++|...+ +++||++||..++ .|.++|+
T Consensus 92 ~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-----------------~p~~~Y~ 153 (344)
T 2gn4_A 92 VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-----------------NPINLYG 153 (344)
T ss_dssp CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-----------------SCCSHHH
T ss_pred CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-----------------CCccHHH
Confidence 999999999876444445677899999999999999999987 8999999997654 2456899
Q ss_pred HHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCC-CceeecCCCceEeeeeHHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGK-PLPIHGDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~ai~ 237 (676)
.+|..+|.+++.+++. .+++++++|||+|||++. ++++.+.+.+..+. ++++. ++...++|+|++|+|++++
T Consensus 154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~---~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~ 229 (344)
T 2gn4_A 154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVL 229 (344)
T ss_dssp HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT---SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC---CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHH
Confidence 9999999999987753 579999999999999875 57788888888887 67764 6778899999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHh
Q 005818 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLF 270 (676)
Q Consensus 238 ~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~ 270 (676)
.+++++..+++|++.++ .+++.|+++.+.+.+
T Consensus 230 ~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 230 KSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred HHHhhccCCCEEecCCC-cEEHHHHHHHHHHhC
Confidence 99988777789998776 699999999887543
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=280.57 Aligned_cols=258 Identities=18% Similarity=0.200 Sum_probs=197.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCC-CcEEEEEcCCCcccc-ccCCCCC--------------CCCCCeEEEEecCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYP-EYKIVVLDKLDYCSN-LKNLNPS--------------RLSPNFKFIKGDVA 68 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~-~~~~~~~--------------~~~~~v~~v~~Dl~ 68 (676)
..+|+|||||||||||++|++.|++++. +++|++++|...... ...+... ....+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 4578999999999999999999999854 489999998753211 0000000 01258999999998
Q ss_pred ------CHHHHHHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCC
Q 005818 69 ------SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 69 ------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~ 142 (676)
|.+.+.+++ .++|+|||+|+.... .++...+++|+.++.+++++|++.+ +++|||+||.++|+....
T Consensus 151 ~~~~gld~~~~~~~~--~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLA--ETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp SGGGGCCHHHHHHHH--HHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCT
T ss_pred CcccCCCHHHHHHHH--cCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCC
Confidence 667888888 589999999998765 3445678999999999999999877 899999999999987654
Q ss_pred CcCCCCCCCCCCCCC-----------ChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC-----CCCChHHHHHH
Q 005818 143 DAVVGNHEASQLLPT-----------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-----FPEKLIPKFIL 206 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~-----------~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~-----~~~~~~~~~~~ 206 (676)
... .|+.+..|. +.|+.+|..+|.++++++++.|++++++||++|||++. ....++..++.
T Consensus 224 ~~~---~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~ 300 (478)
T 4dqv_A 224 SAF---TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL 300 (478)
T ss_dssp TTC---CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred CCc---CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence 433 444443333 34999999999999999887899999999999999854 22345666666
Q ss_pred HHHCCCCcee--ec---C---CCceEeeeeHHHHHHHHHHHHhc-----CCCCceEEEcCCCc--ccHHHHHHHHHHHhC
Q 005818 207 LAMKGKPLPI--HG---D---GSNVRSYLYCEDVAEAFDTILHK-----GEVGHVYNIGTKKE--RRVIDVATDICKLFS 271 (676)
Q Consensus 207 ~~~~~~~~~~--~~---~---~~~~~~~v~v~D~a~ai~~~~~~-----~~~~~~y~i~~~~~--~s~~el~~~i~~~~g 271 (676)
.......++. .+ + ++..++++|++|+|++++.++.+ ...+++||++++++ +|+.|+++.+.+. |
T Consensus 301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g 379 (478)
T 4dqv_A 301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G 379 (478)
T ss_dssp HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence 5543222221 11 1 25778999999999999999875 34567999999988 9999999999884 6
Q ss_pred CC
Q 005818 272 LN 273 (676)
Q Consensus 272 ~~ 273 (676)
.+
T Consensus 380 ~~ 381 (478)
T 4dqv_A 380 YP 381 (478)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=258.83 Aligned_cols=251 Identities=18% Similarity=0.176 Sum_probs=193.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee----------ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY----------GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETH 454 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~----------~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 454 (676)
|+|+|||||||||++++++|++ |++|.. +.+|++|++++.+++++.++|+|||+||.. ....+..+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~ 76 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMT---DVDKCEIE 76 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCccc---ChhhhhhC
Confidence 5799999999999999999994 888854 468999999999999885669999999976 34444567
Q ss_pred hhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeE
Q 005818 455 KPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVC 534 (676)
Q Consensus 455 ~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 534 (676)
+...+++|+.++.+++++|++.++++|++||..+|+.... + ..|+.+..|.+.|+.+|..+|.+++.
T Consensus 77 ~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~-------~~e~~~~~~~~~Y~~sK~~~e~~~~~----- 143 (273)
T 2ggs_A 77 KEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-N-------YKEEDIPNPINYYGLSKLLGETFALQ----- 143 (273)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-S-------BCTTSCCCCSSHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-C-------cCCCCCCCCCCHHHHHHHHHHHHHhC-----
Confidence 8889999999999999999998889999999999864321 2 45555667789999999999999965
Q ss_pred EEEeeecccCCCCChHHHH----HHHHhcCceeccC--CCccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHH
Q 005818 535 TLRVRMPISSDLNNPRNFI----TKISRYNKVVNIP--NSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMY 608 (676)
Q Consensus 535 ~l~~~~~r~~~~~g~~~~~----~~~~~~~~~~~~~--~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i 608 (676)
++++++|++.+||+..+. ..+..+......+ .+++|++|+|++++.+++++..|+||+++ +.+|+.|+++.+
T Consensus 144 -~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~g~~~i~~-~~~s~~e~~~~~ 221 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRKTGIIHVAG-ERISRFELALKI 221 (273)
T ss_dssp -TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTCCEEEECCC-CCEEHHHHHHHH
T ss_pred -CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCcCCeEEECC-CcccHHHHHHHH
Confidence 567788899888754332 3334444432222 37999999999999999887778999999 999999999999
Q ss_pred HhhcCCCCcccccchHhhhhHhccC-CCccccChhHHHhhCCCCC---CHHHH
Q 005818 609 KAYIDPGFKWTNFTLEEQAKVIVAP-RSNNELDASKLKKEFPELL---SIKES 657 (676)
Q Consensus 609 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ld~~k~~~~~~~~~---~~~~~ 657 (676)
.+.+|.+..+....... ..... ..+..+|++|+++.++|.| +++++
T Consensus 222 ~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~ 271 (273)
T 2ggs_A 222 KEKFNLPGEVKEVDEVR---GWIAKRPYDSSLDSSRARKILSTDFYTLDLDGM 271 (273)
T ss_dssp HHHTTCCSCEEEESSCT---TCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGC
T ss_pred HHHhCCChhhccccccc---ccccCCCcccccCHHHHHHHhCCCCCCcccccc
Confidence 99999875542111000 00111 1256899999998666654 55554
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=282.28 Aligned_cols=304 Identities=21% Similarity=0.185 Sum_probs=219.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-cCC----C-------CCCCCCCeEEEEecCCCHHHH
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-KNL----N-------PSRLSPNFKFIKGDVASADLV 73 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-~~~----~-------~~~~~~~v~~v~~Dl~d~~~~ 73 (676)
.+|+|||||||||||++|++.|+++ +++|++++|....... ..+ . ......+++++.+|+.|++.+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 3579999999999999999999777 7899999987531100 000 0 001245899999999998777
Q ss_pred HHHHccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC--cCCCCCCC
Q 005818 74 HFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED--AVVGNHEA 151 (676)
Q Consensus 74 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~e~ 151 (676)
. +. .++|+|||+|+..... .++..+.++|+.++.+++++|++ + .++|||+||.++ |..... ......|+
T Consensus 227 ~-~~--~~~D~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v-G~~~~~~~~~~~~~E~ 297 (508)
T 4f6l_B 227 V-LP--ENMDTIIHAGARTDHF---GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFSEA 297 (508)
T ss_dssp C-CS--SCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT-TSEECTTCSCCEECTT
T ss_pred C-Cc--cCCCEEEECCceecCC---CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh-ccCCccCCcCcccccc
Confidence 6 33 7999999999987532 34456788999999999999998 4 699999999999 442211 11122444
Q ss_pred CC---CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-------ChHHHHHHHHHCCCCceeecCCC
Q 005818 152 SQ---LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 152 ~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
++ ..|.+.|+.+|+.+|++++++++ .|++++++||+.|||++.... ..+..+++....+..++. +.+.
T Consensus 298 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~ 375 (508)
T 4f6l_B 298 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAE 375 (508)
T ss_dssp CSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGG
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccC
Confidence 44 44788999999999999998764 699999999999999976432 346777888777765554 4467
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec---C-----------CCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE---N-----------RPFN 287 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~---~-----------~~~~ 287 (676)
+.++|+|++|+|++++.++.++..+++||+++++++++.|+++.+.+.. .+......|.. . ....
T Consensus 376 ~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~ 454 (508)
T 4f6l_B 376 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDRE 454 (508)
T ss_dssp SEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGG
T ss_pred ceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhccccccc
Confidence 8999999999999999999887778999999999999999999998643 11000000000 0 0001
Q ss_pred CcccccCHHH----HHhCCCcccCCHHHHHHHHHHHHhhC
Q 005818 288 DQRYFLDVQK----LKQLGWYERVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 288 ~~~~~~~~~k----~~~lg~~~~~~~~~~l~~~~~~~~~~ 323 (676)
.....+|.++ ++++||.+...-++.++++++++.+.
T Consensus 455 ~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 455 QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp SEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred CcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1234455554 45689988876688899999888874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=262.02 Aligned_cols=249 Identities=13% Similarity=0.116 Sum_probs=185.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
|||+|+|||| ||||++|+++|+++|++| .++.+|+.|.+ +.++ |+|||+|+..
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~--d~vi~~a~~~- 74 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGV--THLLISTAPD- 74 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTC--CEEEECCCCB-
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCC--CEEEECCCcc-
Confidence 4689999998 999999999999999865 55667887743 5555 9999999965
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHH--cCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRE--NGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
.. .+ ..+.+++++|++ .++ ++|++||..+|+.....+ .+|+.+..|.+.|+.+|+
T Consensus 75 --~~----~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~ 132 (286)
T 3ius_A 75 --SG----GD---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAW-------VDETTPLTPTAARGRWRV 132 (286)
T ss_dssp --TT----BC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCE-------ECTTSCCCCCSHHHHHHH
T ss_pred --cc----cc---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCC-------cCCCCCCCCCCHHHHHHH
Confidence 11 11 135789999998 565 688889999997654433 666778888899999999
Q ss_pred HHHHHHHHccCeEEEEeeecccCCCCChH-HHHHHHHhcCceecc----CCCccchhhHHHHHHHHHhcCCC-ceeEccC
Q 005818 522 MVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVVNI----PNSMTILDELLPISVEMAKRNLS-GIWNFTN 595 (676)
Q Consensus 522 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~~----~~~~~~v~D~a~~~~~~~~~~~~-g~yn~~~ 595 (676)
.+|++++.+ .+++++++|++++|||. ..+.++..+...... ..+|+|++|+|++++.+++++.. ++||+++
T Consensus 133 ~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~ 209 (286)
T 3ius_A 133 MAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCD 209 (286)
T ss_dssp HHHHHHHHS---TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECC
T ss_pred HHHHHHHhh---cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeC
Confidence 999999887 57899999999999996 233344444432221 22899999999999999998755 5999999
Q ss_pred CCcccHHHHHHHHHhhcCCCCcc-cccchHhhhhHh-ccCCCccccChhHHHhhCCC-C-C-CHHHHHHHhhhcc
Q 005818 596 PGVVSHNEILEMYKAYIDPGFKW-TNFTLEEQAKVI-VAPRSNNELDASKLKKEFPE-L-L-SIKESLIKNVFEP 665 (676)
Q Consensus 596 ~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~ld~~k~~~~~~~-~-~-~~~~~l~~~~~~~ 665 (676)
++++|+.|+++.+.+.+|.+... .+.......... .....+..+|++|+++.++| + . +|+++|++++.+.
T Consensus 210 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 210 DEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADA 284 (286)
T ss_dssp SCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhc
Confidence 99999999999999999987543 111111111100 00012567899999886554 4 2 7999999988654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=252.22 Aligned_cols=236 Identities=19% Similarity=0.233 Sum_probs=190.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
||+|||||||||||++|++.|+++ +++|++++|..... ...+++++.+|++|++.+.+++ .++|+||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 68 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGA---------AEAHEEIVACDLADAQAVHDLV--KDCDGII 68 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCC---------CCTTEEECCCCTTCHHHHHHHH--TTCSEEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCccc---------cCCCccEEEccCCCHHHHHHHH--cCCCEEE
Confidence 578999999999999999999999 68999999865311 1246899999999999999999 6899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+... ..++...++.|+.++.++++++++.+ +++|||+||..+|+..... .+..|+++..|.+.|+.+|..
T Consensus 69 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~--~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 69 HLGGVSV----ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRT--TRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp ECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTT--SCBCTTSCCCCCSHHHHHHHH
T ss_pred ECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCC--CCCCCCCCCCCCChHHHHHHH
Confidence 9999762 35667889999999999999999877 8899999999999875422 234677888889999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC-
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV- 245 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~- 245 (676)
+|.+++.++++++++++++||+.+|+... ++...++++|++|+|++++.+++++..
T Consensus 142 ~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~ 198 (267)
T 3ay3_A 142 GEDLASLYYHKFDIETLNIRIGSCFPKPK-----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG 198 (267)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECBCSSSCC-----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHcCCCEEEEeceeecCCCC-----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence 99999998888899999999999984211 112345799999999999999987654
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHH
Q 005818 246 GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMK 318 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~ 318 (676)
.++|++.++.. ..+.|..+++.|||+|++++++.++++.+
T Consensus 199 ~~~~~~~~~~~---------------------------------~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 199 CTVVYGASANT---------------------------------ESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp EEEEEECCSCS---------------------------------SCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ceeEecCCCcc---------------------------------ccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 46777764321 11234455566999999999999988754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=288.27 Aligned_cols=277 Identities=13% Similarity=0.128 Sum_probs=208.2
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHc-CCce-------------------eeccccCCChHH-HHHHhhccCCCEEEECc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKK-GIPF-------------------EYGKGRLENRSQ-LLADIQNVKPTHVFNAA 440 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~-g~~v-------------------~~~~~Dl~d~~~-~~~~~~~~~~d~Vih~a 440 (676)
.++|+|+|||||||||++|+++|+++ |++| .++.+|++|.++ ++++++++ |+|||+|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~--D~Vih~A 390 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLV 390 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHC--SEEEECC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCC--CEEEECc
Confidence 35689999999999999999999998 7654 456789998765 77788876 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCC-------CCCC
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP-------NFTG 513 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~-------~~p~ 513 (676)
|.. .+.....++...+++|+.++.+++++|++.+.++|++||..+|+.....+ .+|+.+ ..|.
T Consensus 391 a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~-------~~E~~~~~~~~p~~~p~ 460 (660)
T 1z7e_A 391 AIA---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY-------FDEDHSNLIVGPVNKPR 460 (660)
T ss_dssp CCC---CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSS-------BCTTTCCEEECCTTCTT
T ss_pred eec---CccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcc-------cCCCccccccCcccCCC
Confidence 976 44444567788999999999999999999887888999999997644333 333332 1455
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCceeccC-----CCccch
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIP-----NSMTIL 572 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~-----~~~~~v 572 (676)
+.|+.||+.+|++++.+.+..+++++++||+++|||. .++.++..+......+ .+|+|+
T Consensus 461 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v 540 (660)
T 1z7e_A 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 540 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEH
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEH
Confidence 7899999999999988766668999999999999984 2445556665543222 179999
Q ss_pred hhHHHHHHHHHhcCC----CceeEccCCC-cccHHHHHHHHHhhcCCCCcccccchH---------hhhhHhccCCCccc
Q 005818 573 DELLPISVEMAKRNL----SGIWNFTNPG-VVSHNEILEMYKAYIDPGFKWTNFTLE---------EQAKVIVAPRSNNE 638 (676)
Q Consensus 573 ~D~a~~~~~~~~~~~----~g~yn~~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~~~~~ 638 (676)
+|+|++++.+++++. +++||+++++ ++|+.|+++.+.+.+|.+.....++.. .+............
T Consensus 541 ~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (660)
T 1z7e_A 541 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRK 620 (660)
T ss_dssp HHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCC
T ss_pred HHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcc
Confidence 999999999998753 4699999986 899999999999999865322222210 00000001112567
Q ss_pred cChhHHHhhCCCC--CCHHHHHHHhhhccCCCCC
Q 005818 639 LDASKLKKEFPEL--LSIKESLIKNVFEPNKKPT 670 (676)
Q Consensus 639 ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~~~~ 670 (676)
+|++|+++.++|. .+|+++|++++..+.+...
T Consensus 621 ~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 621 PSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred cCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 8999998765554 4999999999987766543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-29 Score=244.98 Aligned_cols=208 Identities=19% Similarity=0.218 Sum_probs=176.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+||||||+|+||+++++.|+++ +++|++++|..... ...+++++.+|++|++++.+++ .++|+
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 67 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDP---------AGPNEECVQCDLADANAVNAMV--AGCDG 67 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCC---------CCTTEEEEECCTTCHHHHHHHH--TTCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCccc---------cCCCCEEEEcCCCCHHHHHHHH--cCCCE
Confidence 45689999999999999999999999 68999999864211 1457999999999999999999 69999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+.. ..+++...+++|+.|+.++++++++.+ +++|||+||..+|+..... ....|+.+..|.+.|+.+|
T Consensus 68 vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~--~~~~e~~~~~~~~~Y~~sK 140 (267)
T 3rft_A 68 IVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQT--ERLGPDVPARPDGLYGVSK 140 (267)
T ss_dssp EEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTT--SCBCTTSCCCCCSHHHHHH
T ss_pred EEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCC--CCCCCCCCCCCCChHHHHH
Confidence 99999984 345678899999999999999999887 8899999999999865433 2336777888899999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+|.+++.++++++++++++||+.|+|+.. ++...++|++++|+++++..+++.+.
T Consensus 141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~-----------------------~~~~~~~~~~~~d~a~~~~~~~~~~~ 197 (267)
T 3rft_A 141 CFGENLARMYFDKFGQETALVRIGSCTPEPN-----------------------NYRMLSTWFSHDDFVSLIEAVFRAPV 197 (267)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECBCSSSCC-----------------------STTHHHHBCCHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHhCCeEEEEEeecccCCCC-----------------------CCCceeeEEcHHHHHHHHHHHHhCCC
Confidence 9999999999988999999999999998732 23445578999999999999998876
Q ss_pred CC-ceEEEcCCC
Q 005818 245 VG-HVYNIGTKK 255 (676)
Q Consensus 245 ~~-~~y~i~~~~ 255 (676)
.+ .++++.+++
T Consensus 198 ~~~~~~~~~s~~ 209 (267)
T 3rft_A 198 LGCPVVWGASAN 209 (267)
T ss_dssp CCSCEEEECCCC
T ss_pred CCceEEEEeCCC
Confidence 44 577787765
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=284.67 Aligned_cols=273 Identities=15% Similarity=0.132 Sum_probs=203.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhccCCCEEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++|+|+||||+||||++|+++|+++|++|. ++.+|++|++.+.++++..++|+||
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 347899999999999999999999998662 3568999999999999855569999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
|+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ ... ...|+.+..|.+.|
T Consensus 90 h~A~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~--~~~-~~~E~~~~~p~~~Y 163 (699)
T 1z45_A 90 HFAGLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFP--NMI-PIPEECPLGPTNPY 163 (699)
T ss_dssp ECCSCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGST--TCC-SBCTTSCCCCCSHH
T ss_pred ECCccc---CcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCcccc--ccC-CccccCCCCCCChH
Confidence 999966 33334556778899999999999999999886 788899989886432100 001 14555567778999
Q ss_pred hhhHHHHHHHHHHccCe--EEEEeeecccCCCCChH--------------HH---HHHHHhc--CceeccC--------C
Q 005818 517 SKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR--------------NF---ITKISRY--NKVVNIP--------N 567 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~--------------~~---~~~~~~~--~~~~~~~--------~ 567 (676)
+.||+.+|++++.+.+. .+++++++|++++|||. .+ +.++..+ ......+ .
T Consensus 164 ~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 243 (699)
T 1z45_A 164 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 243 (699)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCC
Confidence 99999999999886433 57899999999888762 12 3333333 2222221 1
Q ss_pred ---CccchhhHHHHHHHHHhcC--------CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCc
Q 005818 568 ---SMTILDELLPISVEMAKRN--------LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSN 636 (676)
Q Consensus 568 ---~~~~v~D~a~~~~~~~~~~--------~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 636 (676)
+|+||+|+|++++.+++.. ..++||+++++.+|+.|+++.+++.+|.+.++...+.. ......
T Consensus 244 ~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~------~~~~~~ 317 (699)
T 1z45_A 244 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR------AGDVLN 317 (699)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCC
T ss_pred eeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCC------CCcccc
Confidence 8999999999999988742 23699999999999999999999999987654322211 111225
Q ss_pred cccChhHHHhhCCCC--CCHHHHHHHhhhccCC
Q 005818 637 NELDASKLKKEFPEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 637 ~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~ 667 (676)
..+|++|+++.++|. .+++++|++++..+.+
T Consensus 318 ~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~ 350 (699)
T 1z45_A 318 LTAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 350 (699)
T ss_dssp CCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHh
Confidence 678999998866665 5999999999876644
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=249.62 Aligned_cols=260 Identities=14% Similarity=0.157 Sum_probs=197.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||+++++.|+++.++++|++++|..... ..+ ...+++++.+|+.|++++.+++ .++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~l----~~~~~~~~~~D~~d~~~l~~~~--~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA--STL----ADQGVEVRHGDYNQPESLQKAF--AGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT--HHH----HHTTCEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH--hHH----hhcCCeEEEeccCCHHHHHHHH--hcCCEEEE
Confidence 479999999999999999999983357888888854211 110 1246889999999999999998 68999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+... . . +.|+.++.+++++|++.+ +++|||+||.++|.. ..+|+.+|..+
T Consensus 73 ~a~~~~-----~---~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~ 124 (287)
T 2jl1_A 73 ISGPHY-----D---N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEES-----------------IIPLAHVHLAT 124 (287)
T ss_dssp CCCCCS-----C---H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGGC-----------------CSTHHHHHHHH
T ss_pred cCCCCc-----C---c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------CCchHHHHHHH
Confidence 998521 1 1 579999999999999987 899999999887621 12599999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~ 246 (676)
|+++++ ++++++++||+.++|+.. ..++.. ....+. .. ...+++.++++|++|+|++++.+++++. .+
T Consensus 125 E~~~~~----~~~~~~ilrp~~~~~~~~--~~~~~~---~~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 193 (287)
T 2jl1_A 125 EYAIRT----TNIPYTFLRNALYTDFFV--NEGLRA---STESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHEN 193 (287)
T ss_dssp HHHHHH----TTCCEEEEEECCBHHHHS--SGGGHH---HHHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTT
T ss_pred HHHHHH----cCCCeEEEECCEeccccc--hhhHHH---HhhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCC
Confidence 998853 689999999999988642 122222 222232 22 3456678899999999999999998754 57
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC-----------CCCC-------------CcccccCHHHHHh-C
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN-----------RPFN-------------DQRYFLDVQKLKQ-L 301 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----------~~~~-------------~~~~~~~~~k~~~-l 301 (676)
++||+++++.+|+.|+++.+.+.+|.+.+. ...+. .+.. ...+..|.+++++ |
T Consensus 194 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (287)
T 2jl1_A 194 KTYNLVSNQPWTFDELAQILSEVSGKKVVH--QPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLI 271 (287)
T ss_dssp EEEEECCSSCBCHHHHHHHHHHHHSSCCEE--EECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred cEEEecCCCcCCHHHHHHHHHHHHCCcceE--EeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHh
Confidence 799999999999999999999999986432 11111 1100 0234567888875 8
Q ss_pred CCcccCCHHHHHHHHHH
Q 005818 302 GWYERVTWEEGLQKTMK 318 (676)
Q Consensus 302 g~~~~~~~~~~l~~~~~ 318 (676)
| |.++++++|+++++
T Consensus 272 G--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 272 G--SLTPLKETVKQALK 286 (287)
T ss_dssp S--SCCCHHHHHHHHHT
T ss_pred C--CCCCHHHHHHHHhc
Confidence 9 77799999998864
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=259.72 Aligned_cols=213 Identities=20% Similarity=0.275 Sum_probs=186.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|+|||||||||||++|++.|+++ ++ +|+..+|. .|++++.+++ .++|+||
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~-------------------------~d~~~l~~~~--~~~d~Vi 51 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ-------------------------TKEEELESAL--LKADFIV 51 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT-------------------------CCHHHHHHHH--HHCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC-------------------------CCHHHHHHHh--ccCCEEE
Confidence 58999999999999999999999 45 66665542 7889999998 5799999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
|+|+.... +++...++.|+.++.+|+++|++.+ ++ +|||+||..+|+ .++|+.+|.
T Consensus 52 h~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~------------------~~~Y~~sK~ 108 (369)
T 3st7_A 52 HLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ------------------DNPYGESKL 108 (369)
T ss_dssp ECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS------------------CSHHHHHHH
T ss_pred ECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC------------------CCCchHHHH
Confidence 99998654 3445567789999999999999987 66 999999999987 346999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
.+|+++++++++.+++++++||+++||++..+ .++++.++..+..+.++.+ +++.+.++++|++|+|++++.+++++
T Consensus 109 ~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~ 187 (369)
T 3st7_A 109 QGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGT 187 (369)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence 99999999999889999999999999998755 3688899999999887776 57889999999999999999999987
Q ss_pred CC--CceEEEcCCCcccHHHHHHHHHHHhCCC
Q 005818 244 EV--GHVYNIGTKKERRVIDVATDICKLFSLN 273 (676)
Q Consensus 244 ~~--~~~y~i~~~~~~s~~el~~~i~~~~g~~ 273 (676)
.. +++||+++++.+|+.|+++.+++.+|.+
T Consensus 188 ~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp CCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred cccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 76 7899999999999999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=260.41 Aligned_cols=266 Identities=11% Similarity=0.088 Sum_probs=193.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------ec-cccCCChHHHHHHhhccCCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YG-KGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~-~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
++|+|+||||+||||++|+++|+++|++|. ++ .+|++|.+.+.++++++ |+|
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA--AGV 87 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC--SEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC--CEE
Confidence 357999999999999999999999998662 24 68999999998888865 999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHH-cCC-cEEEeecCeeeecCCCCCCCCCCCccccCC------
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE-NGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDK------ 508 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~------ 508 (676)
||+||.. .. ..++...+++|+.++.+++++|.+ .++ ++|++||..+|+...... .+.++.|++.
T Consensus 88 ih~A~~~---~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 88 AHIASVV---SF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV--EGIYLDEKSWNLESID 159 (342)
T ss_dssp EECCCCC---SC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC--CCCEECTTCCCHHHHH
T ss_pred EEeCCCC---CC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCC--CCcccCccccCchhhh
Confidence 9999966 22 246678899999999999999985 554 788888888886432110 0122333321
Q ss_pred ---------CCCCCCchhhhHHHHHHHHHHccCeE--EEEeeecccCCCCChH-----------HHHHHHHhcCceec--
Q 005818 509 ---------PNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPR-----------NFITKISRYNKVVN-- 564 (676)
Q Consensus 509 ---------~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~-- 564 (676)
+..|.+.|+.||+.+|++++.+.+.+ +++++++||+++|||. .++.++..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1y1p_A 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA 239 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccc
Confidence 23455789999999999998875332 6889999999999974 23455555554321
Q ss_pred --cCCCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccCh
Q 005818 565 --IPNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 565 --~~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
...+|+|++|+|++++.+++++ ..|.+++++++.+|+.|+++.+.+.+|.. .+ +.... . .......+|+
T Consensus 240 ~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~-~~~~~---~---~~~~~~~~d~ 311 (342)
T 1y1p_A 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TF-PADFP---D---QGQDLSKFDT 311 (342)
T ss_dssp TCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CC-CCCCC---C---CCCCCCEECC
T ss_pred cCCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cC-CCCCC---c---cccccccCCh
Confidence 1237999999999999999875 34544456778899999999999999864 11 11100 0 0111356799
Q ss_pred hHHHhhCCC-----CCCHHHHHHHhhhccC
Q 005818 642 SKLKKEFPE-----LLSIKESLIKNVFEPN 666 (676)
Q Consensus 642 ~k~~~~~~~-----~~~~~~~l~~~~~~~~ 666 (676)
+|+++++++ ..+|+++|++++..+.
T Consensus 312 ~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 312 APSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred HHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 999876543 3689999999986653
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=256.36 Aligned_cols=264 Identities=15% Similarity=0.159 Sum_probs=186.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee--------------------------eccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE--------------------------YGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
+|+||||||+||||++|+++|+++|++|. ++.+|++|++.+.++++++ |+||
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC--TGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC--SEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC--CEEE
Confidence 46899999999999999999999998662 3457999999999999887 9999
Q ss_pred ECccccCCCCcchhccchh-hHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCCCC----
Q 005818 438 NAAGVTGRPNVDWCETHKP-ETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN---- 510 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~---- 510 (676)
|+|+.. . ....++. ..+++|+.|+.+++++|++.+ + ++|++||..++++.... .+..+|+.+.
T Consensus 83 h~A~~~---~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~-----~~~~~E~~~~~~~~ 152 (337)
T 2c29_D 83 HVATPM---D--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ-----LPVYDESCWSDMEF 152 (337)
T ss_dssp ECCCCC---C--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC-----CSEECTTCCCCHHH
T ss_pred Eecccc---C--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC-----CcccCcccCCchhh
Confidence 999854 1 1223343 578999999999999999987 5 66777776644332110 1123344321
Q ss_pred -----CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH------HHHHH---HhcCcee-cc--CCCccchh
Q 005818 511 -----FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKI---SRYNKVV-NI--PNSMTILD 573 (676)
Q Consensus 511 -----~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~---~~~~~~~-~~--~~~~~~v~ 573 (676)
.|.+.|+.||.++|++++.+.+..+++++++||+++|||.. .+... +.+.... .. ...|+|++
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~ 232 (337)
T 2c29_D 153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232 (337)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH
T ss_pred hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH
Confidence 24457999999999999887655689999999999999851 22221 2232211 00 01499999
Q ss_pred hHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHHHhhCCCC
Q 005818 574 ELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL 651 (676)
Q Consensus 574 D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~ 651 (676)
|+|++++.+++++ ..|.|++++ ..+|+.|+++.+.+.++. ..+. .+. .. ........+|++|+++++|.+
T Consensus 233 Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~-~~~--~~----~~~~~~~~~d~~k~~~lG~~p 304 (337)
T 2c29_D 233 DLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIPT-EFK--GV----DENLKSVCFSSKKLTDLGFEF 304 (337)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCCS-CCT--TC----CTTCCCCEECCHHHHHHTCCC
T ss_pred HHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCCC-CCC--cc----cCCCccccccHHHHHHcCCCc
Confidence 9999999999875 457887665 568999999999998742 2111 000 00 011124568999996666655
Q ss_pred -CCHHHHHHHhhhccCC
Q 005818 652 -LSIKESLIKNVFEPNK 667 (676)
Q Consensus 652 -~~~~~~l~~~~~~~~~ 667 (676)
.+++++|++++..+.+
T Consensus 305 ~~~l~e~l~~~~~~~~~ 321 (337)
T 2c29_D 305 KYSLEDMFTGAVDTCRA 321 (337)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 4899999999876654
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=260.75 Aligned_cols=265 Identities=16% Similarity=0.164 Sum_probs=182.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------eccccCCChHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------YGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
+|+|||||||||||++|+++|+++|++|. ++.+|++|++.+.++++++ |+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGC--DFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTC--SEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCC--CEEEE
Confidence 47899999999999999999999998652 3457899988899999887 99999
Q ss_pred CccccCCCCcchhccchh-hHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCee-eecCCCCCCCCCCCccccCCC-----
Q 005818 439 AAGVTGRPNVDWCETHKP-ETIRTNVVGTLTLADVCRENG-L-LMMNYATGCI-FEYDAKHPEGTGIGFKEEDKP----- 509 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v-~~~~~~~~~~~~~~~~~e~~~----- 509 (676)
+|+.. .. ...++. ..+++|+.|+.+++++|++.+ + ++|++||..+ |+.+...+ ..+ .+|+.+
T Consensus 87 ~A~~~---~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~---~~~-~~E~~~~~~~~ 157 (338)
T 2rh8_A 87 VATPV---HF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGT---GLV-VDEKNWTDIEF 157 (338)
T ss_dssp ESSCC---CC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCS---CCC-CCTTTTTCC--
T ss_pred eCCcc---CC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCC---Ccc-cChhhccchhh
Confidence 99854 21 223443 478999999999999999985 6 5666666653 33221100 011 233321
Q ss_pred ---CCC-CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH------HHHH---HHhcCcee-c--------cCC
Q 005818 510 ---NFT-GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITK---ISRYNKVV-N--------IPN 567 (676)
Q Consensus 510 ---~~p-~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~---~~~~~~~~-~--------~~~ 567 (676)
..| ...|+.||.++|++++.+.+..+++++++||+++|||.. .+.. .+.+.... . .+.
T Consensus 158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (338)
T 2rh8_A 158 LTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGS 237 (338)
T ss_dssp -----CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSS
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCc
Confidence 111 226999999999999887655689999999999999851 2211 12332210 0 011
Q ss_pred -CccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHH
Q 005818 568 -SMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKL 644 (676)
Q Consensus 568 -~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~ 644 (676)
+|+|++|+|++++.+++++ ..|.||+++ ..+|+.|+++.+.+.++. +.+.. .. .. ... ....+|++|+
T Consensus 238 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~-~~--~~----~~~-~~~~~d~~k~ 308 (338)
T 2rh8_A 238 VSIAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTD-FG--DF----PPK-SKLIISSEKL 308 (338)
T ss_dssp EEEEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCC-CT--TS----CSS-CSCCCCCHHH
T ss_pred ccEEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCC-CC--CC----CcC-cceeechHHH
Confidence 6999999999999999875 457898876 569999999999998752 21110 10 00 001 1257899999
Q ss_pred HhhCCCC-CCHHHHHHHhhhccCCC
Q 005818 645 KKEFPEL-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 645 ~~~~~~~-~~~~~~l~~~~~~~~~~ 668 (676)
++++|.+ .+++++|++++..+.+.
T Consensus 309 ~~lG~~p~~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 309 VKEGFSFKYGIEEIYDESVEYFKAK 333 (338)
T ss_dssp HHHTCCCSCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHc
Confidence 7776655 49999999998766543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=254.28 Aligned_cols=267 Identities=15% Similarity=0.074 Sum_probs=194.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-----Cce-----------------eeccccCCChHHHHHHhhccC-CCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKG-----IPF-----------------EYGKGRLENRSQLLADIQNVK-PTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g-----~~v-----------------~~~~~Dl~d~~~~~~~~~~~~-~d~Vih~a~ 441 (676)
|+|+|||||||||++|+++|+++| ++| .++.+|++|++.+.+++++++ +|+|||+|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 689999999999999999999999 765 356689999999999999854 699999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--CCcEE--------EeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--GLLMM--------NYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~v--------~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
.. ..++...+++|+.++.+++++|++. +++.+ |+||..+|+..... ..+ .+|+.+..
T Consensus 82 ~~--------~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~----~~~-~~E~~~~~ 148 (364)
T 2v6g_A 82 AN--------RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH----DPP-YTEDLPRL 148 (364)
T ss_dssp CC--------CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC----CSS-BCTTSCCC
T ss_pred CC--------cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC----CCC-CCccccCC
Confidence 65 2456788999999999999999998 67554 57888888753210 112 34444443
Q ss_pred C-CCchhhhHHHHHHHHHHccCeEE-EEeeecccCCCCChH-----H-----HHHHHH---hcCceeccC--------CC
Q 005818 512 T-GSFYSKTKAMVEELLKEYDNVCT-LRVRMPISSDLNNPR-----N-----FITKIS---RYNKVVNIP--------NS 568 (676)
Q Consensus 512 p-~~~Y~~sK~~~E~~~~~~~~~~~-l~~~~~r~~~~~g~~-----~-----~~~~~~---~~~~~~~~~--------~~ 568 (676)
| .+.| +.+|++++.+.+..+ ++++++|++++|||. . ++.+.+ .+......+ .+
T Consensus 149 ~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 224 (364)
T 2v6g_A 149 KYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSD 224 (364)
T ss_dssp SSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBC
T ss_pred ccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCC
Confidence 3 5678 458999988766566 999999999999974 1 122322 344322122 26
Q ss_pred ccchhhHHHHHHHHHhcCC--CceeEccCCCcccHHHHHHHHHhhcCCCCccc--ccchHh----------hh----hHh
Q 005818 569 MTILDELLPISVEMAKRNL--SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWT--NFTLEE----------QA----KVI 630 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~----------~~----~~~ 630 (676)
+++++|+|++++.+++++. +++||+++++++|+.|+++.+++.+|.+.... .++... .. ...
T Consensus 225 ~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 304 (364)
T 2v6g_A 225 CSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENG 304 (364)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhC
Confidence 6788999999999998763 35999999999999999999999999765433 333210 00 000
Q ss_pred ccC----------------CCc-cccChhHHHhhCCCC-CCHHHHHHHhhhccCCC
Q 005818 631 VAP----------------RSN-NELDASKLKKEFPEL-LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 631 ~~~----------------~~~-~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~~ 668 (676)
..+ ... ..+|++|++++++.+ .+++++|++++..+.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 305 LTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp CCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 023 478999998855444 69999999998776554
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=244.46 Aligned_cols=259 Identities=15% Similarity=0.170 Sum_probs=190.7
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
+|||||||||||+++++.|+++.++++|++++|..... ..+ ...+++++.+|+.|++++.+++ .++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA--QAL----AAQGITVRQADYGDEAALTSAL--QGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC--HHH----HHTTCEEEECCTTCHHHHHHHT--TTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh--hhh----hcCCCeEEEcCCCCHHHHHHHH--hCCCEEEEe
Confidence 58999999999999999999983357788888854211 100 1236889999999999999998 789999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 168 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 168 (676)
|+... ..|+.++.+++++|++.+ +++|||+||.++|.. ..+|+.+|..+|
T Consensus 73 a~~~~------------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~sK~~~e 122 (286)
T 2zcu_A 73 SSSEV------------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADTS-----------------PLGLADEHIETE 122 (286)
T ss_dssp C--------------------CHHHHHHHHHHHHT-CCEEEEEEETTTTTC-----------------CSTTHHHHHHHH
T ss_pred CCCCc------------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------cchhHHHHHHHH
Confidence 98521 147889999999999987 899999999888721 135999999999
Q ss_pred HHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CCc
Q 005818 169 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VGH 247 (676)
Q Consensus 169 ~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~ 247 (676)
+++++ .+++++++||+.++++.. .++.. ....+ .+. .+.+.+.++++|++|+|++++.+++++. .++
T Consensus 123 ~~~~~----~~~~~~ilrp~~~~~~~~---~~~~~---~~~~~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~ 190 (286)
T 2zcu_A 123 KMLAD----SGIVYTLLRNGWYSENYL---ASAPA---ALEHG-VFI-GAAGDGKIASATRADYAAAAARVISEAGHEGK 190 (286)
T ss_dssp HHHHH----HCSEEEEEEECCBHHHHH---TTHHH---HHHHT-EEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTC
T ss_pred HHHHH----cCCCeEEEeChHHhhhhH---HHhHH---hhcCC-cee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCc
Confidence 98864 589999999988776432 22222 22223 343 4566788899999999999999998753 578
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecC-----------CCCC-------------CcccccCHHHHHh-CC
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVEN-----------RPFN-------------DQRYFLDVQKLKQ-LG 302 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----------~~~~-------------~~~~~~~~~k~~~-lg 302 (676)
+||+++++.+|+.|+++.+.+.+|.+.+. ...+. .+.. ...+..|.+++++ ||
T Consensus 191 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 268 (286)
T 2zcu_A 191 VYELAGDSAWTLTQLAAELTKQSGKQVTY--QNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIG 268 (286)
T ss_dssp EEEECCSSCBCHHHHHHHHHHHHSSCCEE--EECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHT
T ss_pred eEEEeCCCcCCHHHHHHHHHHHHCCCCce--eeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhC
Confidence 99999999999999999999999986432 11111 0100 0124567788875 89
Q ss_pred CcccCCHHHHHHHHHHHH
Q 005818 303 WYERVTWEEGLQKTMKWY 320 (676)
Q Consensus 303 ~~~~~~~~~~l~~~~~~~ 320 (676)
| |..+++++|+++++||
T Consensus 269 ~-~~~~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 269 H-PTTTLAESVSHLFNVN 285 (286)
T ss_dssp S-CCCCHHHHHHGGGC--
T ss_pred c-CCCCHHHHHHHHHhhc
Confidence 7 5569999999998876
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=252.61 Aligned_cols=263 Identities=16% Similarity=0.228 Sum_probs=184.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee---------------------------eccccCCChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE---------------------------YGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
|+|||||||||||++|+++|+++|++|. ++.+|++|++.+.++++++ |+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC--VGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC--SEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC--CEEE
Confidence 5899999999999999999999998763 2347899999999999987 9999
Q ss_pred ECccccCCCCcchhccch-hhHHhhhhhhHHHHHHHHHHc-CC-cEEEeecCeeeecCCCCCCCCCCCccccCCCC----
Q 005818 438 NAAGVTGRPNVDWCETHK-PETIRTNVVGTLTLADVCREN-GL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN---- 510 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~-~~~~~~Nv~g~~~ll~a~~~~-~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~---- 510 (676)
|+|+.. .....++ ...+++|+.|+.+++++|++. ++ ++|++||..++++.... .. ..+|+.+.
T Consensus 80 h~A~~~-----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~----~~-~~~e~~~~~~~~ 149 (322)
T 2p4h_X 80 HTASPI-----DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD----KD-VLDESDWSDVDL 149 (322)
T ss_dssp ECCCCC-------------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC----CS-EECTTCCCCHHH
T ss_pred EcCCcc-----cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC----Ce-ecCCccccchhh
Confidence 999732 2233343 358899999999999999987 66 67888887654322110 11 13333221
Q ss_pred ----CCCC-chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------HHHHH---HHhcCceeccC-C--Cccchh
Q 005818 511 ----FTGS-FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------NFITK---ISRYNKVVNIP-N--SMTILD 573 (676)
Q Consensus 511 ----~p~~-~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------~~~~~---~~~~~~~~~~~-~--~~~~v~ 573 (676)
.|.+ .|+.||.++|++++.+.+..+++++++||+++|||. .++.. ...+... ..+ . +|+|++
T Consensus 150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~i~v~ 228 (322)
T 2p4h_X 150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE-QIGVTRFHMVHVD 228 (322)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGG-GCCEEEEEEEEHH
T ss_pred hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCc-cCcCCCcCEEEHH
Confidence 2323 699999999999988765568999999999999985 12221 2333221 111 1 699999
Q ss_pred hHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHh-hhhHhccCCCccccChhHHHhhCCCC
Q 005818 574 ELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEE-QAKVIVAPRSNNELDASKLKKEFPEL 651 (676)
Q Consensus 574 D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ld~~k~~~~~~~~ 651 (676)
|+|++++.+++.+ ..|.|| ++++.+|+.|+++.+.+.++. .. ++... ... ..+.....+|++|+++++|.+
T Consensus 229 Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~-~~---~~~~~~~~~--~~~~~~~~~d~~k~~~lG~~p 301 (322)
T 2p4h_X 229 DVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPE-YQ---ILTVDELKE--IKGARLPDLNTKKLVDAGFDF 301 (322)
T ss_dssp HHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTT-SC---CCCTTTTTT--CCCEECCEECCHHHHHTTCCC
T ss_pred HHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCC-CC---CCCCccccC--CCCCcceecccHHHHHhCCcc
Confidence 9999999999765 357899 667899999999999987742 11 11100 000 011124678999997766655
Q ss_pred C-CHHHHHHHhhhccCC
Q 005818 652 L-SIKESLIKNVFEPNK 667 (676)
Q Consensus 652 ~-~~~~~l~~~~~~~~~ 667 (676)
. +|+++|++++..+.+
T Consensus 302 ~~~~~~~l~~~~~~~~~ 318 (322)
T 2p4h_X 302 KYTIEDMFDDAIQCCKE 318 (322)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 3 999999999876644
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-29 Score=270.18 Aligned_cols=266 Identities=13% Similarity=0.084 Sum_probs=183.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee----------ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY----------GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCET 453 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~----------~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 453 (676)
+|+|||||||||||++|++.|+++|++|.. +.+|+.+. +.++++++ |+|||||+... ...+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~--~~~~l~~~--D~Vih~A~~~~--~~~~~~~ 220 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP--ASDLLDGA--DVLVHLAGEPI--FGRFNDS 220 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSC--CTTTTTTC--SEEEECCCC-------CCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccch--hHHhcCCC--CEEEECCCCcc--ccccchh
Confidence 589999999999999999999999998843 34556543 34456655 99999999652 1133456
Q ss_pred chhhHHhhhhhhHHHHHHH-HHHcCC-cEEEeecCeeee-cCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHc
Q 005818 454 HKPETIRTNVVGTLTLADV-CRENGL-LMMNYATGCIFE-YDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY 530 (676)
Q Consensus 454 ~~~~~~~~Nv~g~~~ll~a-~~~~~~-~~v~~sS~~v~~-~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~ 530 (676)
++..++++|+.++.+|+++ |++.++ ++|++||..+|+ .....+ .+|+.+. |.+.|+.+|..+|.++..+
T Consensus 221 ~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~-------~~E~~~~-~~~~y~~~~~~~E~~~~~~ 292 (516)
T 3oh8_A 221 HKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI-------LTEESES-GDDFLAEVCRDWEHATAPA 292 (516)
T ss_dssp GHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE-------ECTTSCC-CSSHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc-------cCCCCCC-CcChHHHHHHHHHHHHHHH
Confidence 6778899999999999999 555666 688888889997 332222 4455454 6689999999999876554
Q ss_pred cCeEEEEeeecccCCCCChH-HHHHHHHh---cCceeccCC-----CccchhhHHHHHHHHHhcC-CCceeEccCCCccc
Q 005818 531 DNVCTLRVRMPISSDLNNPR-NFITKISR---YNKVVNIPN-----SMTILDELLPISVEMAKRN-LSGIWNFTNPGVVS 600 (676)
Q Consensus 531 ~~~~~l~~~~~r~~~~~g~~-~~~~~~~~---~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s 600 (676)
+..+++++++|++++|||. .++..+.. .......++ +|+|++|+|++++.+++++ ..|+||+++++.+|
T Consensus 293 -~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s 371 (516)
T 3oh8_A 293 -SDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVS 371 (516)
T ss_dssp -HHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCEE
T ss_pred -HhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCCC
Confidence 3457999999999999985 23333221 111112222 8999999999999999876 56899999999999
Q ss_pred HHHHHHHHHhhcCCCCcccccchHhhhhHh------ccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhcc
Q 005818 601 HNEILEMYKAYIDPGFKWTNFTLEEQAKVI------VAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEP 665 (676)
Q Consensus 601 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~ 665 (676)
+.|+++.+++.+|.+. ..++|........ .....+..++++|+++++|.+ ++|+++|++++...
T Consensus 372 ~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 372 NADMTKILATSMHRPA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp HHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence 9999999999999765 3333332111100 000114567999999887766 46999999988653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.4e-28 Score=230.90 Aligned_cols=207 Identities=18% Similarity=0.211 Sum_probs=168.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCC-HHHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS-ADLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~~~~~~~~~~~d~Vi 86 (676)
|+||||||||+||+++++.|+++ +++|++++|...... . ..+++++.+|+.| ++++.+++ .++|+||
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~--~------~~~~~~~~~D~~d~~~~~~~~~--~~~d~vi 68 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVP--Q------YNNVKAVHFDVDWTPEEMAKQL--HGMDAII 68 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSC--C------CTTEEEEECCTTSCHHHHHTTT--TTCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchh--h------cCCceEEEecccCCHHHHHHHH--cCCCEEE
Confidence 48999999999999999999999 689999999753211 1 1689999999999 99999998 6899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+..... .++.|+.++.+++++|++.+ +++|||+||..+++.... .| .+..|.+.|+.+|..
T Consensus 69 ~~ag~~~~~--------~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~------~e-~~~~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 69 NVSGSGGKS--------LLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKW------IG-AGFDALKDYYIAKHF 132 (219)
T ss_dssp ECCCCTTSS--------CCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGC------CS-HHHHHTHHHHHHHHH
T ss_pred ECCcCCCCC--------cEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcc------cc-cccccccHHHHHHHH
Confidence 999986532 44678999999999999987 899999999877764321 22 344567889999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-C
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-V 245 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~ 245 (676)
+|++++ +..+++++++||+.+||+..... +.+ +...+++++++|+|++++.+++++. .
T Consensus 133 ~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~---------------~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~ 191 (219)
T 3dqp_A 133 ADLYLT---KETNLDYTIIQPGALTEEEATGL---------------IDI---NDEVSASNTIGDVADTIKELVMTDHSI 191 (219)
T ss_dssp HHHHHH---HSCCCEEEEEEECSEECSCCCSE---------------EEE---SSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHH---hccCCcEEEEeCceEecCCCCCc---------------ccc---CCCcCCcccHHHHHHHHHHHHhCcccc
Confidence 999886 45699999999999999865211 111 2466789999999999999998765 4
Q ss_pred CceEEEcCCCcccHHHHHH
Q 005818 246 GHVYNIGTKKERRVIDVAT 264 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~el~~ 264 (676)
+++||++++. .++.|+..
T Consensus 192 g~~~~i~~g~-~~~~e~~~ 209 (219)
T 3dqp_A 192 GKVISMHNGK-TAIKEALE 209 (219)
T ss_dssp TEEEEEEECS-EEHHHHHH
T ss_pred CcEEEeCCCC-ccHHHHHH
Confidence 7899998875 99998875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-28 Score=234.23 Aligned_cols=201 Identities=11% Similarity=0.077 Sum_probs=156.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
||+|+|||||||||++|+++|+++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~--- 78 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGA--DAVISAFNPG--- 78 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTC--SEEEECCCC----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCC--CEEEEeCcCC---
Confidence 5799999999999999999999999865 56789999999999999987 9999999854
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
..++ ..+++|+.++.+++++|++.++ ++|++||..+|+..... ..++.+..|.+.|+.+|..+|.
T Consensus 79 -----~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~--------~~~~~~~~p~~~Y~~sK~~~e~ 144 (227)
T 3dhn_A 79 -----WNNP-DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL--------RLMDSGEVPENILPGVKALGEF 144 (227)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE--------EGGGTTCSCGGGHHHHHHHHHH
T ss_pred -----CCCh-hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC--------ccccCCcchHHHHHHHHHHHHH
Confidence 1222 3789999999999999999997 67888888777544321 2234566778999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee-c--cCCCccchhhHHHHHHHHHhcCC--CceeEccCCCccc
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV-N--IPNSMTILDELLPISVEMAKRNL--SGIWNFTNPGVVS 600 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s 600 (676)
+++.+.+..+++++++||+++|||......+..+.... . .+.+|+|++|+|++++.+++++. +++||++++++.+
T Consensus 145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~ 224 (227)
T 3dhn_A 145 YLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHH 224 (227)
T ss_dssp HHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC
T ss_pred HHHHHhhccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcc
Confidence 99888767799999999999999863211111122111 1 12379999999999999999874 4699999999988
Q ss_pred HHH
Q 005818 601 HNE 603 (676)
Q Consensus 601 ~~e 603 (676)
+++
T Consensus 225 ~~~ 227 (227)
T 3dhn_A 225 HHH 227 (227)
T ss_dssp ---
T ss_pred cCC
Confidence 753
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.9e-27 Score=226.20 Aligned_cols=216 Identities=14% Similarity=0.200 Sum_probs=169.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCe-EEEEecCCCHHHHHHHHccCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF-KFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
.+++|+||||||||+||+++++.|+++ +++|++++|...... .+ ...++ +++.+|++ +.+.+++ .++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~--~~----~~~~~~~~~~~Dl~--~~~~~~~--~~~ 85 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGP--EL----RERGASDIVVANLE--EDFSHAF--ASI 85 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHH--HH----HHTTCSEEEECCTT--SCCGGGG--TTC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHH--HH----HhCCCceEEEcccH--HHHHHHH--cCC
Confidence 356789999999999999999999999 689999998653211 11 12367 99999999 6666777 689
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
|+|||+|+... .+++...+++|+.++.+++++|++.+ +++||++||.+.+... ..+ .+.+.|+.
T Consensus 86 D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~----------~~~-~~~~~Y~~ 149 (236)
T 3e8x_A 86 DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPD----------QGP-MNMRHYLV 149 (236)
T ss_dssp SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGG----------GSC-GGGHHHHH
T ss_pred CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCC----------CCh-hhhhhHHH
Confidence 99999999764 35678899999999999999999987 8999999995444321 111 45678999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
+|..+|.+++ ..+++++++||+.++|+... ..+.....+...+++++++|+|++++.++++
T Consensus 150 sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~---------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 210 (236)
T 3e8x_A 150 AKRLADDELK----RSSLDYTIVRPGPLSNEEST---------------GKVTVSPHFSEITRSITRHDVAKVIAELVDQ 210 (236)
T ss_dssp HHHHHHHHHH----HSSSEEEEEEECSEECSCCC---------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----HCCCCEEEEeCCcccCCCCC---------------CeEEeccCCCcccCcEeHHHHHHHHHHHhcC
Confidence 9999999876 56999999999999998642 1123334455567899999999999999987
Q ss_pred C-CCCceEEEcCCCcccHHHHHHHHH
Q 005818 243 G-EVGHVYNIGTKKERRVIDVATDIC 267 (676)
Q Consensus 243 ~-~~~~~y~i~~~~~~s~~el~~~i~ 267 (676)
+ ..+++|+++++ ..++.|+++.++
T Consensus 211 ~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 211 QHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp GGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred ccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 6 46789999887 599999988654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=232.64 Aligned_cols=239 Identities=13% Similarity=0.164 Sum_probs=182.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc--CCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK--GIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~--g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
|+|+|||||||||++|+++|+++ |++| .++.+|++|++.+.++++++ |+|||+|+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~- 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGV--SKLLFISGPH- 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECCCCC-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcC--CEEEEcCCCC-
Confidence 47999999999999999999998 8765 45678999999999999987 9999999842
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMV 523 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 523 (676)
. . . ++|+.++.+++++|++.++ ++|++||..+|. .| ..|+.+|..+
T Consensus 78 ---~----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------------~~-~~y~~~K~~~ 124 (287)
T 2jl1_A 78 ---Y----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------------------SI-IPLAHVHLAT 124 (287)
T ss_dssp ---S----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------------------CC-STHHHHHHHH
T ss_pred ---c----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------------CC-CchHHHHHHH
Confidence 1 1 1 6799999999999999997 677777776541 11 3699999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChH--HHHHHHHhcCcee-ccC---CCccchhhHHHHHHHHHhcC--CCceeEccC
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVV-NIP---NSMTILDELLPISVEMAKRN--LSGIWNFTN 595 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~-~~~---~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~ 595 (676)
|++++. .+++++++||+.++++. .++...+...... ..+ .+|+|++|+|++++.+++++ .+++||+++
T Consensus 125 E~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 200 (287)
T 2jl1_A 125 EYAIRT----TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS 200 (287)
T ss_dssp HHHHHH----TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECC
T ss_pred HHHHHH----cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecC
Confidence 999975 46889999998777653 3344444333322 222 28999999999999999875 345999999
Q ss_pred CCcccHHHHHHHHHhhcCCCCcccccchHhhhhHh---ccC---------------CCccccChhHHHhhCCCCCCHHHH
Q 005818 596 PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVI---VAP---------------RSNNELDASKLKKEFPELLSIKES 657 (676)
Q Consensus 596 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~---~~~---------------~~~~~ld~~k~~~~~~~~~~~~~~ 657 (676)
++.+|+.|+++.+.+.+|.+..+.+++........ ..+ ..+..+|++|+++.++.+.+|+++
T Consensus 201 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~l~e~ 280 (287)
T 2jl1_A 201 NQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIGSLTPLKET 280 (287)
T ss_dssp SSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhCCCCCHHHH
Confidence 99999999999999999988777666654321110 000 113456899998865533699999
Q ss_pred HHHhhh
Q 005818 658 LIKNVF 663 (676)
Q Consensus 658 l~~~~~ 663 (676)
|++++.
T Consensus 281 l~~~~~ 286 (287)
T 2jl1_A 281 VKQALK 286 (287)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999763
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=231.58 Aligned_cols=234 Identities=18% Similarity=0.172 Sum_probs=176.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+++|+||||||+|+||+++++.|++++.+++|++++|..... ..+ ..+++++.+|++|++++.+++ .++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~--~~~-----~~~~~~~~~D~~d~~~~~~~~--~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--EKI-----GGEADVFIGDITDADSINPAF--QGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH--HHT-----TCCTTEEECCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch--hhc-----CCCeeEEEecCCCHHHHHHHH--cCCCE
Confidence 567899999999999999999999996678999999864221 111 346789999999999999999 68999
Q ss_pred EEEccccCCcC-------------CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 85 IMHFAAQTHVD-------------NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 85 Vih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
|||+|+..... ...++....++.|+.++.++++++++.+ +++||++||.+++......
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~-------- 143 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPL-------- 143 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGG--------
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCCCcc--------
Confidence 99999975421 1222333567999999999999999887 8899999998876322110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
.......|+.+|..+|.+++. .+++++++||+.+||+......++ .+....++++ ...+++++|
T Consensus 144 -~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~D 207 (253)
T 1xq6_A 144 -NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQT---DTKTVPRAD 207 (253)
T ss_dssp -GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGGS---SCCEEEHHH
T ss_pred -ccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhh--------ccCCcCCcCC---CCcEEcHHH
Confidence 001123588899999988753 689999999999999875322111 0111112221 246999999
Q ss_pred HHHHHHHHHhcCC-CCceEEEcCCC---cccHHHHHHHHHHHhCC
Q 005818 232 VAEAFDTILHKGE-VGHVYNIGTKK---ERRVIDVATDICKLFSL 272 (676)
Q Consensus 232 ~a~ai~~~~~~~~-~~~~y~i~~~~---~~s~~el~~~i~~~~g~ 272 (676)
+|++++.+++++. .+++||+++++ ++|+.|+++.+.+.+|+
T Consensus 208 va~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 208 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 9999999998754 46799999864 59999999999988775
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=241.92 Aligned_cols=236 Identities=18% Similarity=0.185 Sum_probs=180.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
.|++|+|||||||||||++|++.|+++ +++|++++|...... ...+ ......+++++.+|+.|.+++.+++...+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCC
Confidence 355689999999999999999999999 577888888642110 0000 00113579999999999999999995559
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|+|||+|+.. |+.++.+|+++|++.+.+++||+ | +||... +|..+..|.++|+
T Consensus 84 ~d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~e~~~~~p~~~y~ 137 (346)
T 3i6i_A 84 IDIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGHDV-------NRADPVEPGLNMY 137 (346)
T ss_dssp CCEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TTCCCCTTHHHHH
T ss_pred CCEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCCCC-------CccCcCCCcchHH
Confidence 99999999862 67788999999999876889986 4 455321 4455667788999
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 162 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
.+|..+|+++++ .|++++++||+.++|.... .+... ......+..+.++++++..++|++++|+|++++.+++
T Consensus 138 ~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~--~~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~ 210 (346)
T 3i6i_A 138 REKRRVRQLVEE----SGIPFTYICCNSIASWPYY--NNIHP-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD 210 (346)
T ss_dssp HHHHHHHHHHHH----TTCCBEEEECCEESSCCCS--CC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH----cCCCEEEEEecccccccCc--ccccc-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence 999999998864 5899999999999997542 12111 1112245668888999999999999999999999998
Q ss_pred cCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005818 242 KGE-VGHVYNIGT-KKERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 242 ~~~-~~~~y~i~~-~~~~s~~el~~~i~~~~g~~~~ 275 (676)
.+. .+++|++.+ ++.+|+.|+++.+.+.+|.+.+
T Consensus 211 ~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 211 DVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp CGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred CccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 765 477899985 5889999999999999998754
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=236.97 Aligned_cols=205 Identities=17% Similarity=0.202 Sum_probs=166.8
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHc-CC-ce----------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKK-GI-PF----------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~-g~-~v----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
..+|+|+|||||||||++|+++|+++ |+ +| .++.+|++|.+.+.++++++ |+||
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--D~Vi 96 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV--DICI 96 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTC--SEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcC--CEEE
Confidence 34579999999999999999999999 86 54 45678999999999999876 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
|+||.. .+..++.++...+++|+.|+.+++++|.+.++ ++|++||..++ .|.+.|
T Consensus 97 h~Aa~~---~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------------------~p~~~Y 152 (344)
T 2gn4_A 97 HAAALK---HVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------------------NPINLY 152 (344)
T ss_dssp ECCCCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------------------SCCSHH
T ss_pred ECCCCC---CCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------------------CCccHH
Confidence 999976 45555677889999999999999999999997 56777775433 345889
Q ss_pred hhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-----HHHHHHHhcC-ceecc-C---CCccchhhHHHHHHHHH
Q 005818 517 SKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYN-KVVNI-P---NSMTILDELLPISVEMA 583 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~-~~~~~-~---~~~~~v~D~a~~~~~~~ 583 (676)
+.||.++|.+++.+.+ ..+++++++||+++|||+ .++.++..+. +.... + .+|+|++|+|++++.++
T Consensus 153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l 232 (344)
T 2gn4_A 153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSL 232 (344)
T ss_dssp HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHH
Confidence 9999999999998753 257999999999999985 3455555555 32221 1 16899999999999999
Q ss_pred hcCCC-ceeEccCCCcccHHHHHHHHHhhcC
Q 005818 584 KRNLS-GIWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 584 ~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
+++.. ++||+.++ .+|+.|+++.+.+.++
T Consensus 233 ~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 233 KRMHGGEIFVPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHCCSSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred hhccCCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence 88754 49998876 6999999999987653
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=252.01 Aligned_cols=220 Identities=16% Similarity=0.127 Sum_probs=171.1
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHc---CCce---------------------------------------eeccccCC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKK---GIPF---------------------------------------EYGKGRLE 419 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~---g~~v---------------------------------------~~~~~Dl~ 419 (676)
..+|+|+|||||||||++|+++|+++ |++| .++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 34679999999999999999999999 7654 34578997
Q ss_pred ------ChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecC
Q 005818 420 ------NRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYD 492 (676)
Q Consensus 420 ------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~ 492 (676)
|.+.+.++++++ |+|||+||.. +. .++...+++|+.|+.+++++|.+.++ ++|++||+.+|+..
T Consensus 151 ~~~~gld~~~~~~~~~~~--D~Vih~Aa~~---~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~ 221 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETV--DLIVDSAAMV---NA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI 221 (478)
T ss_dssp SGGGGCCHHHHHHHHHHC--CEEEECCSSC---SB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS
T ss_pred CcccCCCHHHHHHHHcCC--CEEEECcccc---CC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc
Confidence 667899999877 9999999976 32 45667899999999999999999987 78999999998754
Q ss_pred CCCCCCCCCCccccCCCCCCC-----------CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------HH
Q 005818 493 AKHPEGTGIGFKEEDKPNFTG-----------SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NF 552 (676)
Q Consensus 493 ~~~~~~~~~~~~~e~~~~~p~-----------~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~ 552 (676)
...+ ..|+.+..|. +.|+.||+.+|++++.+.+..+++++++|++++||+. .+
T Consensus 222 ~~~~-------~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~ 294 (478)
T 4dqv_A 222 EPSA-------FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDW 294 (478)
T ss_dssp CTTT-------CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBH
T ss_pred CCCC-------cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHH
Confidence 4333 3333333222 4599999999999999866568999999999999973 23
Q ss_pred HHHHH----hcCcee-------------ccCCCccchhhHHHHHHHHHhc----C--CCceeEccCCCc--ccHHHHHHH
Q 005818 553 ITKIS----RYNKVV-------------NIPNSMTILDELLPISVEMAKR----N--LSGIWNFTNPGV--VSHNEILEM 607 (676)
Q Consensus 553 ~~~~~----~~~~~~-------------~~~~~~~~v~D~a~~~~~~~~~----~--~~g~yn~~~~~~--~s~~e~~~~ 607 (676)
+.+++ ..+... ....+|+||+|+|++++.++.+ + .+++||+++++. +|+.|+++.
T Consensus 295 ~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~ 374 (478)
T 4dqv_A 295 VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDW 374 (478)
T ss_dssp HHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHH
T ss_pred HHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHH
Confidence 33332 222211 1223899999999999999875 2 346999999988 999999999
Q ss_pred HHhhcCCCCcc
Q 005818 608 YKAYIDPGFKW 618 (676)
Q Consensus 608 i~~~~g~~~~~ 618 (676)
+.+. |.+...
T Consensus 375 l~~~-g~~~~~ 384 (478)
T 4dqv_A 375 LIEA-GYPIRR 384 (478)
T ss_dssp HHHT-TCSCEE
T ss_pred HHHc-CCCccc
Confidence 9996 766544
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=221.43 Aligned_cols=220 Identities=9% Similarity=0.002 Sum_probs=161.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++ +++|++++|...... .+ ...+++++.+|+.|+++ +++ .++|+|||
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~--~~----~~~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAA--DR----LGATVATLVKEPLVLTE--ADL--DSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HH----TCTTSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccc--cc----cCCCceEEecccccccH--hhc--ccCCEEEE
Confidence 47999999999999999999999 689999998643211 11 13578999999999988 666 78999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+..... . ....|+.++.+++++|++.+ ++||++||.+++...........+++..+.|.+.|+.+|..+
T Consensus 69 ~ag~~~~~---~----~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 139 (224)
T 3h2s_A 69 ALSVPWGS---G----RGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY 139 (224)
T ss_dssp CCCCCTTS---S----CTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred CCccCCCc---c----hhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence 99986211 1 23679999999999999987 899999998665544332222224444555688899999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-CC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~ 246 (676)
|.+ ..+.++.+++++++||+.+||++.... +. .....+.. +...+++++++|+|++++.+++++. .+
T Consensus 140 e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g 207 (224)
T 3h2s_A 140 YEY-QFLQMNANVNWIGISPSEAFPSGPATS-YV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR 207 (224)
T ss_dssp HHH-HHHTTCTTSCEEEEEECSBCCCCCCCC-EE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred HHH-HHHHhcCCCcEEEEcCccccCCCcccC-ce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccC
Confidence 954 445556799999999999999955322 10 11111222 2344589999999999999999876 58
Q ss_pred ceEEEcCCCcccHH
Q 005818 247 HVYNIGTKKERRVI 260 (676)
Q Consensus 247 ~~y~i~~~~~~s~~ 260 (676)
++|++++.+..+..
T Consensus 208 ~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 208 DRIVVRDADLEHHH 221 (224)
T ss_dssp SEEEEEECC-----
T ss_pred CEEEEecCcchhcc
Confidence 89999987765443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=220.56 Aligned_cols=218 Identities=14% Similarity=0.143 Sum_probs=144.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||||+||++|++.|+++ +++|++++|...... .+ ..+++++.+|++|+++ +++ .++|+|||
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~--~~-----~~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKIT--QT-----HKDINILQKDIFDLTL--SDL--SDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHH--HH-----CSSSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhh--hc-----cCCCeEEeccccChhh--hhh--cCCCEEEE
Confidence 57999999999999999999999 689999998753211 11 1578999999999987 666 78999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+..... ...|+.++.+++++|++.+ +++||++||.++|....... ...|+.+..|.+.|+.+|...
T Consensus 68 ~ag~~~~~---------~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~--~~~~~~~~~~~~~y~~~k~~~ 135 (221)
T 3ew7_A 68 AYGISPDE---------AEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGN--TLLESKGLREAPYYPTARAQA 135 (221)
T ss_dssp CCCSSTTT---------TTSHHHHHHHHHHHHCSCC-SSEEEEECCCC---------------------CCCSCCHHHHH
T ss_pred CCcCCccc---------cchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCc--cccccCCCCCHHHHHHHHHHH
Confidence 99984321 2458999999999999986 79999999987665443321 124556666788899999999
Q ss_pred HHHHHHHHH-HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-C
Q 005818 168 EMLVMAYGR-SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-V 245 (676)
Q Consensus 168 E~~~~~~~~-~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~ 245 (676)
|.+. .+.+ ..+++++++||+.+||++.....+ ...+..+.+.+++. ++++++|+|++++.+++++. .
T Consensus 136 e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~---~~i~~~Dva~~~~~~l~~~~~~ 204 (221)
T 3ew7_A 136 KQLE-HLKSHQAEFSWTYISPSAMFEPGERTGDY-------QIGKDHLLFGSDGN---SFISMEDYAIAVLDEIERPNHL 204 (221)
T ss_dssp HHHH-HHHTTTTTSCEEEEECSSCCCCC-------------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred HHHH-HHHhhccCccEEEEeCcceecCCCccCce-------EeccccceecCCCC---ceEeHHHHHHHHHHHHhCcccc
Confidence 9873 3443 679999999999999995421111 11223333433332 69999999999999998876 5
Q ss_pred CceEEEcCCCcccHHH
Q 005818 246 GHVYNIGTKKERRVID 261 (676)
Q Consensus 246 ~~~y~i~~~~~~s~~e 261 (676)
+++||++++.+.+..|
T Consensus 205 g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 205 NEHFTVAGKLEHHHHH 220 (221)
T ss_dssp TSEEECCC--------
T ss_pred CCEEEECCCCcccccc
Confidence 8899999987666543
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=246.22 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=161.1
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce------------------------------------eeccccCCChHHHH
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------------EYGKGRLENRSQLL 425 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------------~~~~~Dl~d~~~~~ 425 (676)
..+|+|||||||||||++|+++|++.|++| .++.+|++|++.+.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 345799999999999999999999888755 34567888877666
Q ss_pred HHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 426 ADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 426 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
.+. ++|+|||+||.. . ...++...+++|+.|+.+++++|.+.+.++|++||..+ +..... .....++.|
T Consensus 147 -~~~--~~d~Vih~A~~~---~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~-~~~~~~~~E 215 (427)
T 4f6c_A 147 -LPE--NMDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDI-DTEDVTFSE 215 (427)
T ss_dssp -CSS--CCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECS-SCSCCEECT
T ss_pred -CcC--CCCEEEECCccc---C---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccC-CCCCccccc
Confidence 444 459999999966 2 23566788999999999999999995568889999888 322111 111223444
Q ss_pred cCC--CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------------HHHHHHHhcCceec----
Q 005818 506 EDK--PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------------NFITKISRYNKVVN---- 564 (676)
Q Consensus 506 e~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------------~~~~~~~~~~~~~~---- 564 (676)
++. +..|.+.|+.||+.+|.+++.+.+ .+++++++||+++|||. .++..+........
T Consensus 216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (427)
T 4f6c_A 216 ADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE 294 (427)
T ss_dssp TCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence 432 144779999999999999998743 57999999999999884 23344444444322
Q ss_pred cCCCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcC
Q 005818 565 IPNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 565 ~~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
...+|++++|+|++++.++..+ .+++||+++++++++.|+++.+.+ +|
T Consensus 295 ~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 295 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp CEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred ceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 2228999999999999999877 557999999999999999999998 56
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=224.21 Aligned_cols=238 Identities=8% Similarity=0.053 Sum_probs=175.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHc--CCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKK--GIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~--g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
+|+|||||||||++|++.|+++ |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~-- 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGV--EKLLLISSSE-- 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECC-----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 4899999999999999999998 8765 45678999999999999987 9999999832
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
. ..|+.++.+++++|++.++ ++|++||..+|. .| ..|+.+|..+|
T Consensus 77 -~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------------~~-~~y~~sK~~~e 122 (286)
T 2zcu_A 77 -V------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------------SP-LGLADEHIETE 122 (286)
T ss_dssp ------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------------CC-STTHHHHHHHH
T ss_pred -c------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------------Cc-chhHHHHHHHH
Confidence 0 1478999999999999997 577777766540 11 46999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH-HHHHHHHhcCcee-cc---CCCccchhhHHHHHHHHHhcC--CCceeEccCCC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVV-NI---PNSMTILDELLPISVEMAKRN--LSGIWNFTNPG 597 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~-~~---~~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~ 597 (676)
++++. .+++++++||+.++++. .++..+....... .. ..+++|++|+|++++.+++++ .+++||+++++
T Consensus 123 ~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 198 (286)
T 2zcu_A 123 KMLAD----SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDS 198 (286)
T ss_dssp HHHHH----HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSS
T ss_pred HHHHH----cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCC
Confidence 99975 47899999996654432 3344444443322 11 128999999999999999875 34699999999
Q ss_pred cccHHHHHHHHHhhcCCCCcccccchHhhhhHhc---cC---------------CCccccChhHHHhhCCCC-CCHHHHH
Q 005818 598 VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIV---AP---------------RSNNELDASKLKKEFPEL-LSIKESL 658 (676)
Q Consensus 598 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~---~~---------------~~~~~ld~~k~~~~~~~~-~~~~~~l 658 (676)
.+|+.|+++.+.+.+|.+..+.+++......... .+ .....+|++|+++.++++ .+|+++|
T Consensus 199 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l 278 (286)
T 2zcu_A 199 AWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESV 278 (286)
T ss_dssp CBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHH
Confidence 9999999999999999887776666543221110 00 112456899998855555 6999999
Q ss_pred HHhhhcc
Q 005818 659 IKNVFEP 665 (676)
Q Consensus 659 ~~~~~~~ 665 (676)
++++..+
T Consensus 279 ~~~~~~~ 285 (286)
T 2zcu_A 279 SHLFNVN 285 (286)
T ss_dssp HGGGC--
T ss_pred HHHHhhc
Confidence 9987543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=240.92 Aligned_cols=199 Identities=18% Similarity=0.185 Sum_probs=167.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccC-CChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRL-ENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNV 463 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl-~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv 463 (676)
|||+|||||||||++|+++|+++|+ +.++.+|+ .|++.+.++++++ |+|||+|+.. . ..++...+++|+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~~~--d~Vih~a~~~---~----~~~~~~~~~~n~ 70 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-HHIFEVHRQTKEEELESALLKA--DFIVHLAGVN---R----PEHDKEFSLGNV 70 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHHHC--SEEEECCCSB---C----TTCSTTCSSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhccC--CEEEECCcCC---C----CCCHHHHHHHHH
Confidence 6899999999999999999999998 34567788 8999999999987 9999999966 2 245677889999
Q ss_pred hhHHHHHHHHHHcCC--cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeec
Q 005818 464 VGTLTLADVCRENGL--LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541 (676)
Q Consensus 464 ~g~~~ll~a~~~~~~--~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 541 (676)
.++.+++++|++.++ ++|++||..+|+ .+.|+.+|..+|++++.+.+..+++++++
T Consensus 71 ~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~ 128 (369)
T 3st7_A 71 SYLDHVLDILTRNTKKPAILLSSSIQATQ----------------------DNPYGESKLQGEQLLREYAEEYGNTVYIY 128 (369)
T ss_dssp BHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999985 578888887762 37899999999999999876678999999
Q ss_pred ccCCCCChH----------HHHHHHHhcCceecc-CC---CccchhhHHHHHHHHHhcCC---CceeEccCCCcccHHHH
Q 005818 542 ISSDLNNPR----------NFITKISRYNKVVNI-PN---SMTILDELLPISVEMAKRNL---SGIWNFTNPGVVSHNEI 604 (676)
Q Consensus 542 r~~~~~g~~----------~~~~~~~~~~~~~~~-~~---~~~~v~D~a~~~~~~~~~~~---~g~yn~~~~~~~s~~e~ 604 (676)
|++++|||. .++..+..+...... +. +++|++|+|++++.+++++. +++||+++++.+|+.|+
T Consensus 129 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~ 208 (369)
T 3st7_A 129 RWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208 (369)
T ss_dssp EECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHH
T ss_pred ECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHH
Confidence 999999984 234455555543322 11 89999999999999998873 47999999999999999
Q ss_pred HHHHHhhcCCC
Q 005818 605 LEMYKAYIDPG 615 (676)
Q Consensus 605 ~~~i~~~~g~~ 615 (676)
++.+.+.+|.+
T Consensus 209 ~~~~~~~~g~~ 219 (369)
T 3st7_A 209 VDLLYKFKQSR 219 (369)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCCC
Confidence 99999998865
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=221.84 Aligned_cols=208 Identities=18% Similarity=0.168 Sum_probs=162.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|+||||||||+||+++++.|+++|+.++|++++|.... ...+++++.+|+.|++.+.+++ +|+|
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~----~d~v 69 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS----IDTA 69 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC----CSEE
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh----hcEE
Confidence 4579999999999999999999999543499999986532 2357888999999988776554 9999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
||+|+.... ...++...++.|+.++.+++++|++.+ +++||++||.++|+. |.++|+.+|.
T Consensus 70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~----------------~~~~y~~sK~ 130 (215)
T 2a35_A 70 FCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------SSIFYNRVKG 130 (215)
T ss_dssp EECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHHHH
T ss_pred EECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC----------------CccHHHHHHH
Confidence 999997542 235677899999999999999999987 889999999988853 2457999999
Q ss_pred HHHHHHHHHHHHcCCC-EEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 166 GAEMLVMAYGRSYGLP-VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
.+|++++. .+++ ++++||+.+||+.... .++..+ . +...++ .+ ..++++|++|+|++++.+++++.
T Consensus 131 ~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~-~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~ 197 (215)
T 2a35_A 131 ELEQALQE----QGWPQLTIARPSLLFGPREEF-RLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEG 197 (215)
T ss_dssp HHHHHHTT----SCCSEEEEEECCSEESTTSCE-EGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHH----cCCCeEEEEeCceeeCCCCcc-hHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC
Confidence 99998764 4899 9999999999997631 222111 1 111222 22 25689999999999999998876
Q ss_pred CCceEEEcCCCcccHH
Q 005818 245 VGHVYNIGTKKERRVI 260 (676)
Q Consensus 245 ~~~~y~i~~~~~~s~~ 260 (676)
+++||+++++..++.
T Consensus 198 -~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 198 -KGVRFVESDELRKLG 212 (215)
T ss_dssp -SEEEEEEHHHHHHHH
T ss_pred -CCceEEcHHHHHHhh
Confidence 789999987765543
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=217.13 Aligned_cols=218 Identities=17% Similarity=0.169 Sum_probs=164.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+||||||||+||+++++.|++.+ +++|++++|...... . ....+++++.+|+.|++++.+++ .++|+|||
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~R~~~~~~--~----~~~~~v~~~~~D~~d~~~l~~~~--~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH-IDHFHIGVRNVEKVP--D----DWRGKVSVRQLDYFNQESMVEAF--KGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CTTEEEEESSGGGSC--G----GGBTTBEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC-CCcEEEEECCHHHHH--H----hhhCCCEEEEcCCCCHHHHHHHH--hCCCEEEE
Confidence 479999999999999999998873 567777777643211 1 12357999999999999999999 79999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+.... ...|+.++.+++++|++.+ +++|||+||.+ .... .+ . .+...+..+
T Consensus 72 ~a~~~~~----------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~---~~~~---------~~---~-~~~~~~~~~ 124 (289)
T 3e48_A 72 IPSIIHP----------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYA---DQHN---------NP---F-HMSPYFGYA 124 (289)
T ss_dssp CCCCCCS----------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESC---CSTT---------CC---S-TTHHHHHHH
T ss_pred eCCCCcc----------chhhHHHHHHHHHHHHHcC-CCEEEEEcccC---CCCC---------CC---C-ccchhHHHH
Confidence 9986542 1358899999999999988 89999999943 2111 01 0 122223344
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC-C
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV-G 246 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~-~ 246 (676)
|+.+ ++.|++++++||+.++|+. ...+ .....+. ....+.+++.++|++++|+|++++.+++++.. +
T Consensus 125 e~~~----~~~g~~~~ilrp~~~~~~~------~~~~-~~~~~~~-~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g 192 (289)
T 3e48_A 125 SRLL----STSGIDYTYVRMAMYMDPL------KPYL-PELMNMH-KLIYPAGDGRINYITRNDIARGVIAIIKNPDTWG 192 (289)
T ss_dssp HHHH----HHHCCEEEEEEECEESTTH------HHHH-HHHHHHT-EECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred HHHH----HHcCCCEEEEecccccccc------HHHH-HHHHHCC-CEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCC
Confidence 4443 3469999999999999873 2222 2222222 23345678899999999999999999987654 7
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005818 247 HVYNIGTKKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 247 ~~y~i~~~~~~s~~el~~~i~~~~g~~~ 274 (676)
++||++ ++.+|+.|+++.+.+.+|.+.
T Consensus 193 ~~~~~~-~~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 193 KRYLLS-GYSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp CEEEEC-CEEEEHHHHHHHHHHHHTSCC
T ss_pred ceEEeC-CCcCCHHHHHHHHHHHHCCce
Confidence 899999 999999999999999999853
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=224.56 Aligned_cols=229 Identities=14% Similarity=0.146 Sum_probs=174.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+||||||||+||+++++.|+++| +++|++++|.........+ ...+++++.+|+.|++++.+++ .++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l----~~~~~~~~~~D~~d~~~l~~~~--~~~d~vi 77 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKEL----RLQGAEVVQGDQDDQVIMELAL--NGAYATF 77 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHH----HHTTCEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHH----HHCCCEEEEecCCCHHHHHHHH--hcCCEEE
Confidence 5799999999999999999999994 2889999886532111111 1246899999999999999999 7899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+++..... ..+.|+.++.+++++|++.+ +++||++||.++|+.... .+..+|+.+|..
T Consensus 78 ~~a~~~~~~--------~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~------------~~~~~y~~sK~~ 136 (299)
T 2wm3_A 78 IVTNYWESC--------SQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAG------------RLAAAHFDGKGE 136 (299)
T ss_dssp ECCCHHHHT--------CHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTT------------SCCCHHHHHHHH
T ss_pred EeCCCCccc--------cchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCC------------cccCchhhHHHH
Confidence 999753210 13567889999999999987 899999988888763321 134679999999
Q ss_pred HHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCcee-ecCCCceEeeeeHHHHHHHHHHHHhcCC-
Q 005818 167 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI-HGDGSNVRSYLYCEDVAEAFDTILHKGE- 244 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~ai~~~~~~~~- 244 (676)
+|+++++ .|++++++||+.+||+... .+... ....+....+ ...++..++|+|++|++++++.+++++.
T Consensus 137 ~e~~~~~----~gi~~~ilrp~~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~ 207 (299)
T 2wm3_A 137 VEEYFRD----IGVPMTSVRLPCYFENLLS--HFLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK 207 (299)
T ss_dssp HHHHHHH----HTCCEEEEECCEEGGGGGT--TTCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH
T ss_pred HHHHHHH----CCCCEEEEeecHHhhhchh--hcCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh
Confidence 9998864 4899999999999997431 11100 0112322111 2236678899999999999999997642
Q ss_pred -CCceEEEcCCCcccHHHHHHHHHHHhCCC
Q 005818 245 -VGHVYNIGTKKERRVIDVATDICKLFSLN 273 (676)
Q Consensus 245 -~~~~y~i~~~~~~s~~el~~~i~~~~g~~ 273 (676)
.+++|++++ +.+|+.|+++.+.+.+|.+
T Consensus 208 ~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 208 YVGQNIGLST-CRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp HTTCEEECCS-EEECHHHHHHHHHHHHSSC
T ss_pred hCCeEEEeee-ccCCHHHHHHHHHHHHCCC
Confidence 578999986 6799999999999999975
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-26 Score=246.30 Aligned_cols=218 Identities=19% Similarity=0.223 Sum_probs=160.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------------------eeccccCCChHHHHH
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------------EYGKGRLENRSQLLA 426 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------------~~~~~Dl~d~~~~~~ 426 (676)
.+|+|+|||||||||++|+++|++.|++| .++.+|+.|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 35799999999999999999998888654 34567888866666
Q ss_pred HhhccCCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 427 DIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 427 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
++.+ +|+|||+||.. + ...++...+++|+.++.+++++|++.+.++||+||..+ +..... .....++.|+
T Consensus 228 ~~~~--~D~Vih~Aa~~---~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~-~~~~~~~~E~ 297 (508)
T 4f6l_B 228 LPEN--MDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDI-DTEDVTFSEA 297 (508)
T ss_dssp CSSC--CSEEEECCCC--------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECT-TCSCCEECTT
T ss_pred CccC--CCEEEECCcee---c---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCcc-CCcCcccccc
Confidence 4444 59999999965 2 23456788899999999999999996668899999988 321111 0112234444
Q ss_pred CC--CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------------HHHHHHHhcCceec----c
Q 005818 507 DK--PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------------NFITKISRYNKVVN----I 565 (676)
Q Consensus 507 ~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------------~~~~~~~~~~~~~~----~ 565 (676)
+. +..|.+.|+.+|+.+|++++.+.+ .+++++++||+++||+. .++..+........ .
T Consensus 298 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~ 376 (508)
T 4f6l_B 298 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 376 (508)
T ss_dssp CSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGS
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCc
Confidence 32 134679999999999999998743 58999999999999984 12333333333222 1
Q ss_pred CCCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhc
Q 005818 566 PNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYI 612 (676)
Q Consensus 566 ~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~ 612 (676)
..+|+|++|+|++++.++.++ .+++||+++++++++.|+++.+.+..
T Consensus 377 ~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 377 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp EEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred eEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 128999999999999999877 56799999999999999999999864
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=221.29 Aligned_cols=204 Identities=12% Similarity=0.161 Sum_probs=164.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNV 448 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 448 (676)
||+|+||||+||||++|++.|+++|++| .++.+|++|.+++.++++++ |+|||+||..
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vi~~Ag~~----- 75 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGC--DGIVHLGGIS----- 75 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTC--SEEEECCSCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCC--CEEEECCCCc-----
Confidence 5689999999999999999999999765 56779999999999999976 9999999964
Q ss_pred chhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHH
Q 005818 449 DWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELL 527 (676)
Q Consensus 449 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~ 527 (676)
...+.+..+++|+.|+.+++++|++.++ ++|++||..+|+..... ...+|+.+..|.+.|+.||..+|.++
T Consensus 76 --~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~------~~~~e~~~~~~~~~Y~~sK~~~e~~~ 147 (267)
T 3rft_A 76 --VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQT------ERLGPDVPARPDGLYGVSKCFGENLA 147 (267)
T ss_dssp --SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTT------SCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred --CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCC------CCCCCCCCCCCCChHHHHHHHHHHHH
Confidence 2455678899999999999999999886 78889998888643221 13566677788899999999999999
Q ss_pred HHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC--ceeEccCCCcccHHHHH
Q 005818 528 KEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS--GIWNFTNPGVVSHNEIL 605 (676)
Q Consensus 528 ~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~--g~yn~~~~~~~s~~e~~ 605 (676)
+.+.+.++++++++|++.++++.. ......+|++++|+++++..+++.+.. .++++.++++.++.++.
T Consensus 148 ~~~a~~~g~~~~~vr~~~v~~~~~----------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 217 (267)
T 3rft_A 148 RMYFDKFGQETALVRIGSCTPEPN----------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDNS 217 (267)
T ss_dssp HHHHHHHCCCEEEEEECBCSSSCC----------STTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCCG
T ss_pred HHHHHHhCCeEEEEEeecccCCCC----------CCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccCh
Confidence 988767899999999999998620 001112688999999999999988743 47888888877776654
Q ss_pred HHHHhhcCC
Q 005818 606 EMYKAYIDP 614 (676)
Q Consensus 606 ~~i~~~~g~ 614 (676)
.. +.+|.
T Consensus 218 ~~--~~~g~ 224 (267)
T 3rft_A 218 HL--GFLGW 224 (267)
T ss_dssp GG--GGGCC
T ss_pred hH--HHCCC
Confidence 33 45554
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=199.74 Aligned_cols=203 Identities=15% Similarity=0.160 Sum_probs=155.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+.|+||||||||+||+++++.|+++ +++|++++|...... .....+++++.+|+.|++++.+++ .++|+|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~v 71 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLP------SEGPRPAHVVVGDVLQAADVDKTV--AGQDAV 71 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSC------SSSCCCSEEEESCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcc------cccCCceEEEEecCCCHHHHHHHH--cCCCEE
Confidence 3479999999999999999999999 689999998653211 111457899999999999999999 789999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
||+|+..... ++ .+.|+.++.++++++++.+ +++||++||.++|+.....+ .+..+|+.+|.
T Consensus 72 i~~a~~~~~~----~~---~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~----------~~~~~y~~~K~ 133 (206)
T 1hdo_A 72 IVLLGTRNDL----SP---TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVP----------PRLQAVTDDHI 133 (206)
T ss_dssp EECCCCTTCC----SC---CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSC----------GGGHHHHHHHH
T ss_pred EECccCCCCC----Cc---cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccccc----------ccchhHHHHHH
Confidence 9999976531 11 1478999999999999887 89999999999987654211 14568999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC-
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE- 244 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~- 244 (676)
.+|++++ +.+++++++||+.+ +++.....+.. .+.+.+. .++++++|+|++++.+++++.
T Consensus 134 ~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~ 194 (206)
T 1hdo_A 134 RMHKVLR----ESGLKYVAVMPPHI-GDQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEY 194 (206)
T ss_dssp HHHHHHH----HTCSEEEEECCSEE-ECCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTT
T ss_pred HHHHHHH----hCCCCEEEEeCCcc-cCCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCccc
Confidence 9999874 36899999999998 33321111110 0001110 379999999999999998765
Q ss_pred CCceEEEcCCC
Q 005818 245 VGHVYNIGTKK 255 (676)
Q Consensus 245 ~~~~y~i~~~~ 255 (676)
.+++|+++++.
T Consensus 195 ~g~~~~i~~g~ 205 (206)
T 1hdo_A 195 DGHSTYPSHQY 205 (206)
T ss_dssp TTCEEEEECCC
T ss_pred cccceeeeccc
Confidence 57899999874
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=221.87 Aligned_cols=198 Identities=12% Similarity=0.137 Sum_probs=155.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNV 448 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 448 (676)
||+|+|||||||||++|+++|+++|++| .++.+|++|++.+.++++++ |+|||+|+..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~----- 74 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDC--DGIIHLGGVS----- 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTC--SEEEECCSCC-----
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCC--CEEEECCcCC-----
Confidence 5689999999999999999999999765 45668999999999999876 9999999954
Q ss_pred chhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCC-CCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 449 DWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDA-KHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 449 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~-~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
...+....+++|+.++.+++++|++.++ ++|++||..+|+... ..| ..|+.+..|.+.|+.+|..+|.+
T Consensus 75 --~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e~~ 145 (267)
T 3ay3_A 75 --VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTR-------IDTEVPRRPDSLYGLSKCFGEDL 145 (267)
T ss_dssp --SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSC-------BCTTSCCCCCSHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCC-------CCCCCCCCCCChHHHHHHHHHHH
Confidence 1344567889999999999999999886 788999999886532 222 55666778889999999999999
Q ss_pred HHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC--CceeEccCCCcccHHHH
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL--SGIWNFTNPGVVSHNEI 604 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~~e~ 604 (676)
++.+.+..+++++++||+++|+... ......+++|++|+|++++.+++++. .++||+.++...++.++
T Consensus 146 ~~~~~~~~gi~~~~lrp~~v~~~~~----------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 215 (267)
T 3ay3_A 146 ASLYYHKFDIETLNIRIGSCFPKPK----------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWWDN 215 (267)
T ss_dssp HHHHHHTTCCCEEEEEECBCSSSCC----------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSCCBCC
T ss_pred HHHHHHHcCCCEEEEeceeecCCCC----------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCccccccCH
Confidence 9887555689999999999984210 00112268999999999999998874 35888876554444443
Q ss_pred HHH
Q 005818 605 LEM 607 (676)
Q Consensus 605 ~~~ 607 (676)
.+.
T Consensus 216 ~~~ 218 (267)
T 3ay3_A 216 DKS 218 (267)
T ss_dssp GGG
T ss_pred HHH
Confidence 333
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=222.64 Aligned_cols=228 Identities=20% Similarity=0.217 Sum_probs=169.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEec-CCCHHHHHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGD-VASADLVHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~D-l~d~~~~~~~~~~~~~d~ 84 (676)
++|+|||||||||||++|++.|+++ +++|++++|.........+. ...+++++.+| ++|++++.+++ .++|+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~--~~~d~ 76 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLF--EGAHL 76 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHH--TTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHH--hcCCE
Confidence 3678999999999999999999998 57788888764321001111 12478999999 99999999999 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc--ccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE--VYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~--vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
|||+++.... ..|+.+ .+++++|++.+++++|||+||.. .|+. .+.++|+.
T Consensus 77 Vi~~a~~~~~-----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---------------~~~~~y~~ 129 (352)
T 1xgk_A 77 AFINTTSQAG-----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---------------WPAVPMWA 129 (352)
T ss_dssp EEECCCSTTS-----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---------------CCCCTTTH
T ss_pred EEEcCCCCCc-----------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---------------CCCccHHH
Confidence 9999875321 236666 99999999875478999999975 3322 12356999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHH-HHCCCC-ceeecCCCceEeeeeH-HHHHHHHHHH
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL-AMKGKP-LPIHGDGSNVRSYLYC-EDVAEAFDTI 239 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~v~v-~D~a~ai~~~ 239 (676)
+|..+|++++. .+++++++||+ +||++.... +.+.+... ...+.. +.+++++++.++++|+ +|+|++++.+
T Consensus 130 sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~ 203 (352)
T 1xgk_A 130 PKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSL-PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI 203 (352)
T ss_dssp HHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSS-SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----cCCCEEEEecc-eecCCchhc-ccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHH
Confidence 99999998865 48999999987 688765321 10000001 112221 1346667888999999 8999999999
Q ss_pred HhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005818 240 LHKGE---VGHVYNIGTKKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 240 ~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~ 274 (676)
++++. .+++||+++ +.+|+.|+++.+.+.+|.+.
T Consensus 204 l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 204 FKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp HHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred HhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCC
Confidence 98752 578999995 67999999999999999863
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=221.28 Aligned_cols=249 Identities=13% Similarity=0.138 Sum_probs=181.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
+|+|+|||||||||++|++.|+++|++| .++.+|+.|.+++.++++..++|+|||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 4689999999999999999999999865 345789999999999999444599999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
+|+. .|+.++.+++++|++.+ ++++++| +|+.+ .++..+..|.+.|+
T Consensus 90 ~a~~------------------~n~~~~~~l~~aa~~~g~v~~~v~S---~~g~~-----------~~e~~~~~p~~~y~ 137 (346)
T 3i6i_A 90 TVGG------------------ESILDQIALVKAMKAVGTIKRFLPS---EFGHD-----------VNRADPVEPGLNMY 137 (346)
T ss_dssp CCCG------------------GGGGGHHHHHHHHHHHCCCSEEECS---CCSSC-----------TTTCCCCTTHHHHH
T ss_pred CCch------------------hhHHHHHHHHHHHHHcCCceEEeec---ccCCC-----------CCccCcCCCcchHH
Confidence 9982 28899999999999999 8888774 34321 33445666778999
Q ss_pred hhHHHHHHHHHHccCeEEEEeeecccCCCCChH--HHHHHHH---hcCceeccCC-----CccchhhHHHHHHHHHhcCC
Q 005818 518 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITKIS---RYNKVVNIPN-----SMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~---~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~ 587 (676)
.+|+.+|+++++ .+++++++|++.++|.. .+..... ........++ +|+|++|+|++++.++..+.
T Consensus 138 ~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~ 213 (346)
T 3i6i_A 138 REKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR 213 (346)
T ss_dssp HHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHH----cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc
Confidence 999999999986 36889999998888753 2222111 2222222222 79999999999999998863
Q ss_pred --CceeEccC-CCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccC-C----------------CccccCh-----h
Q 005818 588 --SGIWNFTN-PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAP-R----------------SNNELDA-----S 642 (676)
Q Consensus 588 --~g~yn~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~----------------~~~~ld~-----~ 642 (676)
+++||+++ ++.+|+.|+++.+.+.+|.+.++..++..+........ . ....++. .
T Consensus 214 ~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (346)
T 3i6i_A 214 TLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDV 293 (346)
T ss_dssp GTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEE
T ss_pred ccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcc
Confidence 57899985 48999999999999999998887777765442222111 0 0111222 3
Q ss_pred HHHhhCCCC--CCHHHHHHHhhhccCCC
Q 005818 643 KLKKEFPEL--LSIKESLIKNVFEPNKK 668 (676)
Q Consensus 643 k~~~~~~~~--~~~~~~l~~~~~~~~~~ 668 (676)
++.++++.. +++++.|++++.++.++
T Consensus 294 ~~~~~~p~~~~t~~~e~l~~~~~~~~~~ 321 (346)
T 3i6i_A 294 EVTTLYPEDSFRTVEECFGEYIVKMEEK 321 (346)
T ss_dssp EHHHHSTTCCCCCHHHHHHHHHCC----
T ss_pred cHHHhCCCCCcCcHHHHHHHHHHHhhcc
Confidence 356666644 68999999998776654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=220.26 Aligned_cols=231 Identities=17% Similarity=0.201 Sum_probs=169.1
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
|+...|+++||||||||+||+++++.|+++ +++|++++|..... ...+. .....+++++.+|+.|++++.+++ .
T Consensus 5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~-~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a~--~ 78 (318)
T 2r6j_A 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSK-TTLLD-EFQSLGAIIVKGELDEHEKLVELM--K 78 (318)
T ss_dssp ----CCCCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSC-HHHHH-HHHHTTCEEEECCTTCHHHHHHHH--T
T ss_pred ccccCCCCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCch-hhHHH-HhhcCCCEEEEecCCCHHHHHHHH--c
Confidence 344344568999999999999999999999 57788888864211 00000 001247899999999999999999 7
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CCh
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNP 159 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~ 159 (676)
++|+|||+++... +.++.+++++|++.+.+++||+ | +||... .+..+..| ...
T Consensus 79 ~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~ 132 (318)
T 2r6j_A 79 KVDVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE-------DRINALPPFEAL 132 (318)
T ss_dssp TCSEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT-------TTCCCCHHHHHH
T ss_pred CCCEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc-------ccccCCCCcchh
Confidence 8999999998532 3457899999998765889984 3 355322 12222233 246
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
| .+|..+|+++++ .+++++++||+.+++. +++.+......+..+.+++++...+++++++|++++++.+
T Consensus 133 y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 201 (318)
T 2r6j_A 133 I-ERKRMIRRAIEE----ANIPYTYVSANCFASY------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV 201 (318)
T ss_dssp H-HHHHHHHHHHHH----TTCCBEEEECCEEHHH------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEcceehhh------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHH
Confidence 8 999999987753 5899999999987753 3333333323455567778888999999999999999999
Q ss_pred HhcCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCC
Q 005818 240 LHKGE-VGHVYNIGT-KKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 240 ~~~~~-~~~~y~i~~-~~~~s~~el~~~i~~~~g~~~ 274 (676)
++++. .++.|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 202 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 202 ATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp TTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCC
Confidence 98754 466788765 478999999999999999764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=224.87 Aligned_cols=477 Identities=14% Similarity=0.106 Sum_probs=275.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc-------ccccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-------SNLKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-------~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
++++++|||||++.||+++++.|+++ |++|++.++.... ...+.........+.+ ..+|+.|.+++++++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v 82 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV 82 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence 55789999999999999999999999 7888888764310 0000000000000112 235777764433332
Q ss_pred ----cc-CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCc
Q 005818 78 ----LT-EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 78 ----~~-~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
+. .++|++||+||.... +.+.+++...+++|+.|+.++.+++. +.+ -.++|++||...+-+..+
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~-- 159 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFG-- 159 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT--
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCC--
Confidence 22 479999999998642 34555677899999999999887764 222 368999999654322221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
...|+.+|.....+.+.++.+ +|+++..+.|+. . ..+... . ...
T Consensus 160 ------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~------T~m~~~----~---~~~------- 206 (604)
T 2et6_A 160 ------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-R------SRMTES----I---MPP------- 206 (604)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C------CHHHHT----T---SCH-------
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-c------Cccccc----c---CCh-------
Confidence 235999999999999887765 489999999962 1 111100 0 000
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC--CCceEEEcCCC------------------cccHHHHHHHHHHHhCCCCCcceeee
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE--VGHVYNIGTKK------------------ERRVIDVATDICKLFSLNPDTQIKFV 281 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~~------------------~~s~~el~~~i~~~~g~~~~~~~~~~ 281 (676)
........+|++.+++.++.... .++++.+.+|. ..+..++...+.+...........+.
T Consensus 207 ~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 286 (604)
T 2et6_A 207 PMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDDSRKPEYL 286 (604)
T ss_dssp HHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCCCTTSCGGG
T ss_pred hhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchhhccccccc
Confidence 00113467999999999886432 46777776652 23444554444443322111000000
Q ss_pred -cCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhhCCCCcccccccCCCCCccCcCCCccCccCCCCccchhh
Q 005818 282 -ENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLK 360 (676)
Q Consensus 282 -~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (676)
+..|... .++...+ +..+. .|... ..
T Consensus 287 ~~~~P~~~------------------~d~~~l~----~ka~~--------------~~~~~---~~-------------- 313 (604)
T 2et6_A 287 KNQYPFML------------------NDYATLT----NEARK--------------LPAND---AS-------------- 313 (604)
T ss_dssp SCBCCSSS------------------CCHHHHH----HHHTT--------------SCCCC---CT--------------
T ss_pred cccCcchH------------------HHHHHHH----HHHHh--------------CCccc---cc--------------
Confidence 0000000 0111111 11110 01000 00
Q ss_pred ccCCccccceeecccCCCCCCCCccEEEEEcCCcchhHHHHHHHHHcCCceee----------------------ccccC
Q 005818 361 INNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEY----------------------GKGRL 418 (676)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~----------------------~~~Dl 418 (676)
. ... .....++++||||++.||+++++.|+++|++|.. +.+|+
T Consensus 314 ------~--------~~~-~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv 378 (604)
T 2et6_A 314 ------G--------APT-VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDV 378 (604)
T ss_dssp ------T--------CCC-CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCH
T ss_pred ------c--------ccc-cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcCh
Confidence 0 000 0122357999999999999999999999987622 23444
Q ss_pred -CChHH-HHHHhhcc-CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeee
Q 005818 419 -ENRSQ-LLADIQNV-KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIF 489 (676)
Q Consensus 419 -~d~~~-~~~~~~~~-~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~ 489 (676)
.+.+. ++++.+.. ++|++||+||.... +-.+...++.+..+++|+.|+..+.+++.. . +.++|++||...+
T Consensus 379 ~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~ 458 (604)
T 2et6_A 379 AKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI 458 (604)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence 33222 22222222 67999999997521 111223445667899999999999888743 2 3578888886543
Q ss_pred ecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccC
Q 005818 490 EYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIP 566 (676)
Q Consensus 490 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~ 566 (676)
. +......|+.||.....+.+.+. ...++++..+-|+. .-+ +....... . .
T Consensus 459 ~------------------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~--m~~~~~~~-~----~ 512 (604)
T 2et6_A 459 Y------------------GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA--MTLSIMRE-Q----D 512 (604)
T ss_dssp S------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC--C--------------
T ss_pred c------------------CCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc--cccccCch-h----h
Confidence 1 11223579999999999888763 24579999999873 221 11111100 0 0
Q ss_pred CCccchhhHHHHHHHHHhcC--CCc-eeEccCC-----------------CcccHHHHHHHHHhhcCC
Q 005818 567 NSMTILDELLPISVEMAKRN--LSG-IWNFTNP-----------------GVVSHNEILEMYKAYIDP 614 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~--~~g-~yn~~~~-----------------~~~s~~e~~~~i~~~~g~ 614 (676)
......+|++.+++.++... .+| ++.+.++ ..++..++++.+.++...
T Consensus 513 ~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 513 KNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred ccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 13446889999998887542 233 5655544 235666666666665544
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-25 Score=210.39 Aligned_cols=188 Identities=12% Similarity=0.164 Sum_probs=150.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------eeccccCCC-hHHHHHHhhccCCCEEEECccccCCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------EYGKGRLEN-RSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------~~~~~Dl~d-~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
|||+|||||||||++|+++|+++|++| .++.+|++| ++++.++++++ |+|||+||.. .
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~--d~vi~~ag~~---~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGM--DAIINVSGSG---G 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTC--SEEEECCCCT---T
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCC--CEEEECCcCC---C
Confidence 589999999999999999999999865 567899999 99999999976 9999999965 1
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
...+++|+.++.+++++|++.++ ++|++||..++... + +.+ .+..|.+.|+.+|..+|++
T Consensus 76 --------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~------~~e--~~~~~~~~Y~~sK~~~e~~ 136 (219)
T 3dqp_A 76 --------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---K------WIG--AGFDALKDYYIAKHFADLY 136 (219)
T ss_dssp --------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---G------CCS--HHHHHTHHHHHHHHHHHHH
T ss_pred --------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---c------ccc--cccccccHHHHHHHHHHHH
Confidence 23778999999999999999987 67777876655321 1 222 3445568899999999999
Q ss_pred HHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee---ccCCCccchhhHHHHHHHHHhcCC--CceeEccCCCcccH
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV---NIPNSMTILDELLPISVEMAKRNL--SGIWNFTNPGVVSH 601 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~ 601 (676)
++ +..+++++++||+.+||+.. .... ....++++++|+|++++.+++++. +++||+++++ .++
T Consensus 137 ~~---~~~~i~~~ilrp~~v~g~~~--------~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~ 204 (219)
T 3dqp_A 137 LT---KETNLDYTIIQPGALTEEEA--------TGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAI 204 (219)
T ss_dssp HH---HSCCCEEEEEEECSEECSCC--------CSEEEESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEH
T ss_pred HH---hccCCcEEEEeCceEecCCC--------CCccccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccH
Confidence 96 34689999999999998731 1111 233489999999999999998873 4699998875 899
Q ss_pred HHHHHHH
Q 005818 602 NEILEMY 608 (676)
Q Consensus 602 ~e~~~~i 608 (676)
.|+++.-
T Consensus 205 ~e~~~~~ 211 (219)
T 3dqp_A 205 KEALESL 211 (219)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9887653
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-24 Score=206.45 Aligned_cols=212 Identities=13% Similarity=0.024 Sum_probs=160.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|+||||||+|+||+++++.|+++|+..+|++++|...... . ....+++++.+|++|++++.+++ .++|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~--~----~~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--E----EAYKNVNQEVVDFEKLDDYASAF--QGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC--S----GGGGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc--c----cccCCceEEecCcCCHHHHHHHh--cCCCE
Confidence 4568999999999999999999999943228998888643211 0 11236889999999999999888 68999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+..... .++...++.|+.++.++++++++.+ +++||++||.++|+. +.++|+.+|
T Consensus 88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----------------~~~~Y~~sK 147 (242)
T 2bka_A 88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------SNFLYLQVK 147 (242)
T ss_dssp EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHHH
T ss_pred EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC----------------CcchHHHHH
Confidence 99999975432 2345788999999999999999877 789999999988863 135799999
Q ss_pred HHHHHHHHHHHHHcCC-CEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 165 AGAEMLVMAYGRSYGL-PVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+|.+++. .++ +++++||+.++|+...+ .....+........+. .++. ..+++++|+|++++.+++++
T Consensus 148 ~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~-~~~~~~~~~~~~~~~~-~~~~----~~~~~~~dva~~~~~~~~~~ 217 (242)
T 2bka_A 148 GEVEAKVEE----LKFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLPD-SWAS----GHSVPVVTVVRAMLNNVVRP 217 (242)
T ss_dssp HHHHHHHHT----TCCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCCT-TGGG----GTEEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHh----cCCCCeEEEcCceecCCCCCC-cHHHHHHHHhhcccCc-cccC----CcccCHHHHHHHHHHHHhCc
Confidence 999998764 478 59999999999997532 2333333433332221 1111 24899999999999999988
Q ss_pred CCCceEEEcCC
Q 005818 244 EVGHVYNIGTK 254 (676)
Q Consensus 244 ~~~~~y~i~~~ 254 (676)
...+.|++.++
T Consensus 218 ~~~~~~~~~~~ 228 (242)
T 2bka_A 218 RDKQMELLENK 228 (242)
T ss_dssp CCSSEEEEEHH
T ss_pred cccCeeEeeHH
Confidence 77677776543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=220.08 Aligned_cols=235 Identities=19% Similarity=0.177 Sum_probs=171.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc---cccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS---NLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+|+||||||||+||+++++.|+++ +++|++++|..... ....+. .....+++++.+|+.|++++.+++ .++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~--~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDAL--KQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHH--hCCC
Confidence 578999999999999999999999 57888888864221 000000 001347899999999999999999 7899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CChhHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSA 162 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~ 162 (676)
+|||+++..... .|+.++.+++++|++.+++++||+ | +||...... ..+..| .+.| .
T Consensus 79 ~vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~------~~~~~p~~~~y-~ 136 (313)
T 1qyd_A 79 VVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM------EHALQPGSITF-I 136 (313)
T ss_dssp EEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC------CCCCSSTTHHH-H
T ss_pred EEEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc------ccCCCCCcchH-H
Confidence 999999875431 256778999999999765889985 3 455432111 122234 3468 9
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
+|..+|++++ +.+++++++||+.++|.... .+..........++.+.++++++..+++++++|++++++.++++
T Consensus 137 sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 210 (313)
T 1qyd_A 137 DKRKVRRAIE----AASIPYTYVSSNMFAGYFAG--SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 210 (313)
T ss_dssp HHHHHHHHHH----HTTCCBCEEECCEEHHHHTT--TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----hcCCCeEEEEeceecccccc--ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence 9999998875 35899999999999874321 11000000012334456677888999999999999999999987
Q ss_pred CC-CCceEEEcCC-CcccHHHHHHHHHHHhCCCC
Q 005818 243 GE-VGHVYNIGTK-KERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 243 ~~-~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~ 274 (676)
+. .++.|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 211 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 211 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred cccCCceEEEeCCCCccCHHHHHHHHHHhcCCCC
Confidence 64 4677888764 78999999999999999764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=212.58 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=173.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... ..+. .....+++++.+|++|++++.++++..
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEAL--DDLV-AAYPDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGG--HHHH-HHCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH-HhccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999 68899988864321 1110 112357899999999999998887432
Q ss_pred -CCCEEEEccccCCc----CCcCCChHHHHHHHHHHH----HHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGT----HVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~----~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+||.... ..+.+++...+++|+.++ +.++..+++.+ ..+||++||...+.+.
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----------- 145 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF----------- 145 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC-----------
Confidence 89999999998643 234456667899999994 44555556655 6899999997665332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC---------ChHHHHHHHHHCCCCceeecC
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE---------KLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 219 (676)
.+...|+.+|...|.+++.++.+ +|+++++++||.+.++...+. .+........ .+..
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--- 215 (281)
T 3m1a_A 146 ---AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTR----QLVQ--- 215 (281)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHH----HHHH---
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHH----HHHh---
Confidence 23567999999999999998887 689999999999988753211 1221111110 0100
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFS 271 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g 271 (676)
.....++.+++|+|++++.+++.+..+..|+++++....+.+....+.+.++
T Consensus 216 ~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 216 GSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp C-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 1122368899999999999999888888999998887777777777666553
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-24 Score=207.22 Aligned_cols=197 Identities=13% Similarity=0.124 Sum_probs=128.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
|||+|||||||||++|+++|+++|++| .++.+|++|++. +.+.++ |+|||+||.. .
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~---~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQ--NVVVDAYGIS---P 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTC--SEEEECCCSS---T
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCC--CEEEECCcCC---c
Confidence 689999999999999999999999865 456789998877 677776 9999999954 1
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
.....|+.++.+++++|++.++ ++|++||..+|+...... +..++.+..|.+.|+.+|..+|.+
T Consensus 74 ---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~------~~~~~~~~~~~~~y~~~k~~~e~~ 138 (221)
T 3ew7_A 74 ---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN------TLLESKGLREAPYYPTARAQAKQL 138 (221)
T ss_dssp ---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------------CCCSCCHHHHHHHH
T ss_pred ---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc------cccccCCCCCHHHHHHHHHHHHHH
Confidence 1256799999999999999864 788888887765433211 245555667778899999999997
Q ss_pred HHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee---ccCCCccchhhHHHHHHHHHhcCC--CceeEccCCCcccH
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV---NIPNSMTILDELLPISVEMAKRNL--SGIWNFTNPGVVSH 601 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~ 601 (676)
........+++++++||+.+|||.............+ ..+.++++++|+|++++.+++++. +++||++++.+.+.
T Consensus 139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~ 218 (221)
T 3ew7_A 139 EHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH 218 (221)
T ss_dssp HHHHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred HHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence 3222225689999999999999843322222122211 122379999999999999999874 46999999988776
Q ss_pred HH
Q 005818 602 NE 603 (676)
Q Consensus 602 ~e 603 (676)
.|
T Consensus 219 ~~ 220 (221)
T 3ew7_A 219 HH 220 (221)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=208.16 Aligned_cols=237 Identities=10% Similarity=0.143 Sum_probs=171.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK-GIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~-g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
|+|+|||||||||++|++.|+++ |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~-- 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGM--DTVVFIPSII-- 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTC--SEEEECCCCC--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 57999999999999999999998 8765 55789999999999999987 9999999954
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
.. ...|+.++.+++++|++.+++ +|++|| ++... . .| ..+...+..+|
T Consensus 77 -~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss---~~~~~-------------~---~~-~~~~~~~~~~e 125 (289)
T 3e48_A 77 -HP----------SFKRIPEVENLVYAAKQSGVAHIIFIGY---YADQH-------------N---NP-FHMSPYFGYAS 125 (289)
T ss_dssp -CS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEE---SCCST-------------T---CC-STTHHHHHHHH
T ss_pred -cc----------chhhHHHHHHHHHHHHHcCCCEEEEEcc---cCCCC-------------C---CC-CccchhHHHHH
Confidence 11 134899999999999999985 555555 22110 1 11 11223334566
Q ss_pred HHHHHccCeEEEEeeecccCCCCChH-HHHHHHHhcCcee-ccCC---CccchhhHHHHHHHHHhcCC--CceeEccCCC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVV-NIPN---SMTILDELLPISVEMAKRNL--SGIWNFTNPG 597 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~-~~~~---~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~ 597 (676)
+.+. ..+++++++||+.++|+. .++..+....... ..++ +|++++|+|++++.++..+. +++||++ ++
T Consensus 126 ~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~ 200 (289)
T 3e48_A 126 RLLS----TSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GY 200 (289)
T ss_dssp HHHH----HHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CE
T ss_pred HHHH----HcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CC
Confidence 6654 357899999999999985 3444444443322 2222 69999999999999998874 5699999 99
Q ss_pred cccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCC---------------ccccChhHHHhhCCCC-CCHHHHHHHh
Q 005818 598 VVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRS---------------NNELDASKLKKEFPEL-LSIKESLIKN 661 (676)
Q Consensus 598 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~ld~~k~~~~~~~~-~~~~~~l~~~ 661 (676)
.+|+.|+++.+.+.+|.++.+.+++..++......|.. ....+...++++++.+ .+|++-+++.
T Consensus 201 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 201 SYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQEN 280 (289)
T ss_dssp EEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHHHHH
Confidence 99999999999999999988888877655443333111 1123555666666655 5887777664
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=209.82 Aligned_cols=228 Identities=16% Similarity=0.168 Sum_probs=168.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC-cc---ccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD-YC---SNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~-~~---~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
+||+||||||||+||+++++.|+++ +++|++++|.. .. ...+.+. .....+++++.+|+.|++++.+++ .+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~a~--~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVSVL--KQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHHHH--cC
Confidence 4578999999999999999999999 57788888864 11 0000000 001246899999999999999999 78
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CChh
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPY 160 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 160 (676)
+|+|||+++... +.++.+++++|++.+.+++||+ | +||... ++..+..| .+.|
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 131 (321)
T 3c1o_A 78 VDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE-------DRIKPLPPFESVL 131 (321)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG-------GGCCCCHHHHHHH
T ss_pred CCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc-------cccccCCCcchHH
Confidence 999999998632 4567899999998765789983 3 455322 12222233 3569
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHH---HHHCCCCceeecCCCceEeeeeHHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFIL---LAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~ 237 (676)
.+|..+|+++++ .+++++++||+.+++. +.+.+.. ....+..+.+++++...+++++++|++++++
T Consensus 132 -~sK~~~e~~~~~----~~~~~~~lrp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 132 -EKKRIIRRAIEA----AALPYTYVSANCFGAY------FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEEHHH------HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEeceeccc------cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence 999999988753 4899999999988874 2222222 1123445677788889999999999999999
Q ss_pred HHHhcCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005818 238 TILHKGE-VGHVYNIGT-KKERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 238 ~~~~~~~-~~~~y~i~~-~~~~s~~el~~~i~~~~g~~~~ 275 (676)
.+++++. .++.|++.+ ++.+|+.|+++.+.+.+|.+.+
T Consensus 201 ~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 9998754 467788876 4789999999999999998653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=212.48 Aligned_cols=229 Identities=18% Similarity=0.211 Sum_probs=167.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc----cccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS----NLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~----~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
+|+||||||||+||+++++.|+++ +++|++++|..... ....+ ......+++++.+|+.|++++.+++ .++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~--~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAV--KNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHH--cCC
Confidence 578999999999999999999999 57788888864211 00000 0001357899999999999999999 689
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CChhH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYS 161 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~ 161 (676)
|+|||+++... +.++.+++++|++.+++++||+ | +||... .+..+..| .+.|
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y- 131 (308)
T 1qyc_A 79 DVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-S---EFGNDV-------DNVHAVEPAKSVF- 131 (308)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TSCCCCTTHHHHH-
T ss_pred CEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-c---ccccCc-------cccccCCcchhHH-
Confidence 99999998632 3457899999998866889984 4 354322 12223334 3468
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh
Q 005818 162 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH 241 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~ 241 (676)
.+|..+|+++++ .+++++++||+.++|.... .+... ......++.+.+++++...+++++++|++++++.+++
T Consensus 132 ~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 132 EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLR--SLAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTT--TTTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHh----cCCCeEEEEeceecccccc--ccccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 999999988764 4899999999999875321 11000 0011134456777888899999999999999999998
Q ss_pred cCC-CCceEEEcCC-CcccHHHHHHHHHHHhCCCC
Q 005818 242 KGE-VGHVYNIGTK-KERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 242 ~~~-~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~ 274 (676)
++. .++.|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence 654 4677888754 78999999999999999764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=201.17 Aligned_cols=227 Identities=17% Similarity=0.099 Sum_probs=165.5
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
|...|++|+||||||+|+||+++++.|+++ +++|++++|..... +.+.. ...+++++.+|++|++++.++++..
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDL--VSLAK--ECPGIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHH--HSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH--hccCCCcEEecCCCHHHHHHHHHHc
Confidence 445577889999999999999999999999 67899988864211 11000 0135678899999999999998643
Q ss_pred -CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+|+..... .+.+++...+++|+.++.++++++... +...+||++||...|....
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 144 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP---------- 144 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC----------
Confidence 589999999976532 233456678999999999999887653 2147999999988775432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...|.+++.++++ .+++++++|||.++++........+.+...+..+.+ .+++++
T Consensus 145 ----~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 211 (244)
T 1cyd_A 145 ----NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAE 211 (244)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBC
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCC
Confidence 2346999999999999998876 589999999999999753110011223233332222 136899
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
++|+|++++.+++.+. .++.+++.+|..
T Consensus 212 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 212 VEDVVNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred HHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence 9999999999997542 477898887753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-24 Score=206.87 Aligned_cols=198 Identities=10% Similarity=0.016 Sum_probs=142.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|||+|||||||||++|+++|+++|++| .++.+|++|++. +.+.++ |+|||+||...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~~-- 74 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSV--DAVVDALSVPW-- 74 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTC--SEEEECCCCCT--
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccC--CEEEECCccCC--
Confidence 589999999999999999999999865 567889998877 677776 99999999541
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
.......|+.++.+++++|++.+.++|++||+.+++...... ..+.++.....|.+.|+.+|..+|.+
T Consensus 75 --------~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~sK~~~e~~ 142 (224)
T 3h2s_A 75 --------GSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADH----PMILDFPESAASQPWYDGALYQYYEY 142 (224)
T ss_dssp --------TSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSS----CGGGGCCGGGGGSTTHHHHHHHHHHH
T ss_pred --------CcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCc----cccccCCCCCccchhhHHHHHHHHHH
Confidence 112357899999999999999997888888875554322110 11233333444578899999999955
Q ss_pred HHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee---ccCCCccchhhHHHHHHHHHhcCC--CceeEccCCCcccH
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV---NIPNSMTILDELLPISVEMAKRNL--SGIWNFTNPGVVSH 601 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~~~s~ 601 (676)
..+.+..+++++++||+.+|||..... .......+ ....++++++|+|++++.+++++. +++|++++.+..+.
T Consensus 143 -~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~ 220 (224)
T 3h2s_A 143 -QFLQMNANVNWIGISPSEAFPSGPATS-YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHH 220 (224)
T ss_dssp -HHHTTCTTSCEEEEEECSBCCCCCCCC-EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC----
T ss_pred -HHHHhcCCCcEEEEcCccccCCCcccC-ceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhc
Confidence 444455789999999999998842111 11111111 122389999999999999999873 46999999776654
Q ss_pred H
Q 005818 602 N 602 (676)
Q Consensus 602 ~ 602 (676)
.
T Consensus 221 ~ 221 (224)
T 3h2s_A 221 H 221 (224)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=206.36 Aligned_cols=229 Identities=17% Similarity=0.174 Sum_probs=166.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-----cccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-----NLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
||+||||||||+||+++++.|+++ +++|++++|..... ..+.+. .....+++++.+|+.|++++.+++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~~--~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELID-NYQSLGVILLEGDINDHETLVKAI--KQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHH-HHHhCCCEEEEeCCCCHHHHHHHH--hC
Confidence 578999999999999999999999 56777788764100 000000 001246899999999999999999 78
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCC-CChh
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPY 160 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 160 (676)
+|+|||+|+... +.++.+++++|++.+.+++||+ | +||... ++..+..| .+.|
T Consensus 77 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 130 (307)
T 2gas_A 77 VDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV-------DRHDAVEPVRQVF 130 (307)
T ss_dssp CSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TSCCCCTTHHHHH
T ss_pred CCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc-------ccccCCCcchhHH
Confidence 999999998643 3457899999998765889983 3 455322 12223334 3568
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~ 240 (676)
.+|..+|++++. .+++++++||+.+++.... .+... ......++.+.+++++...+++++++|++++++.++
T Consensus 131 -~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 131 -EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLR--NLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEETTTTGG--GTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEcceeeccccc--ccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 999999987753 5899999999999885321 11000 000113344666788888999999999999999999
Q ss_pred hcCC-CCceEEEcCC-CcccHHHHHHHHHHHhCCCC
Q 005818 241 HKGE-VGHVYNIGTK-KERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 241 ~~~~-~~~~y~i~~~-~~~s~~el~~~i~~~~g~~~ 274 (676)
+++. .++.|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCC
Confidence 8654 4667777754 68999999999999999764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.5e-24 Score=205.11 Aligned_cols=196 Identities=14% Similarity=0.170 Sum_probs=146.7
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
..+.|+|+|||||||||++|+++|+++|++| .++.+|++ +.+.+++.++ |+|||+||
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~--D~vi~~ag 93 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASI--DAVVFAAG 93 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTC--SEEEECCC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCC--CEEEECCC
Confidence 3456899999999999999999999999754 55677887 5666777766 99999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhH
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTK 520 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK 520 (676)
.. . ..++...+++|+.++.+++++|++.++ ++|++||...+ ..+..+ .+.+.|+.+|
T Consensus 94 ~~---~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~--------------~~~~~~-~~~~~Y~~sK 151 (236)
T 3e8x_A 94 SG---P----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV--------------DPDQGP-MNMRHYLVAK 151 (236)
T ss_dssp CC---T----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS--------------CGGGSC-GGGHHHHHHH
T ss_pred CC---C----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC--------------CCCCCh-hhhhhHHHHH
Confidence 65 1 356778899999999999999999987 56666663322 111112 4557899999
Q ss_pred HHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC--CCceeEccCCCc
Q 005818 521 AMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN--LSGIWNFTNPGV 598 (676)
Q Consensus 521 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~ 598 (676)
..+|++++ ..+++++++||+.++|+... .............++++++|+|++++.+++++ .+++||++++ .
T Consensus 152 ~~~e~~~~----~~gi~~~~lrpg~v~~~~~~--~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~ 224 (236)
T 3e8x_A 152 RLADDELK----RSSLDYTIVRPGPLSNEEST--GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-D 224 (236)
T ss_dssp HHHHHHHH----HSSSEEEEEEECSEECSCCC--SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-S
T ss_pred HHHHHHHH----HCCCCEEEEeCCcccCCCCC--CeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-C
Confidence 99999987 35799999999999998410 00000000111248999999999999999887 3469999987 5
Q ss_pred ccHHHHHHHHH
Q 005818 599 VSHNEILEMYK 609 (676)
Q Consensus 599 ~s~~e~~~~i~ 609 (676)
+++.|+++.++
T Consensus 225 ~~~~e~~~~i~ 235 (236)
T 3e8x_A 225 TPIAKVVEQLG 235 (236)
T ss_dssp EEHHHHHHTC-
T ss_pred cCHHHHHHHhc
Confidence 99999998765
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=206.71 Aligned_cols=229 Identities=17% Similarity=0.047 Sum_probs=163.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--CCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE--KIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--~~d~ 84 (676)
||+||||||+|+||+++++.|+++ +++|++++|...... . .+.+|+.|++++.++++.. ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~----------~---~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIE----------A---DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEE----------C---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHcc----------c---cccCCcccHHHHHHHHHHcCCCccE
Confidence 368999999999999999999999 688999988642111 0 1568999999998888533 8999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCC-----CCCC-----
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVG-----NHEA----- 151 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~-----~~e~----- 151 (676)
|||+|+.... ..++...+++|+.++.++++++... ...++||++||..+|+......... .+++
T Consensus 66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 2dkn_A 66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIEL 142 (255)
T ss_dssp EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhh
Confidence 9999997652 3567889999999999999988754 1258999999999987652111000 0000
Q ss_pred --CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 152 --SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 152 --~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
....+...|+.+|..+|.+++.++++ +|++++++|||.++|+... .+......+....... + ..+.+
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~------~~~~~~~~~~~~~~~~-~-~~~~~ 214 (255)
T 2dkn_A 143 AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ------ASKADPRYGESTRRFV-A-PLGRG 214 (255)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH------HHHHCTTTHHHHHSCC-C-TTSSC
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh------hcccchhhHHHHHHHH-H-HhcCC
Confidence 01134567999999999999988766 5899999999999987431 1100000000000000 1 23368
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHH
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVID 261 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~e 261 (676)
++++|+|++++.+++.+ ..++.|+++++..++++|
T Consensus 215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 99999999999999765 357899999987766543
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=202.68 Aligned_cols=226 Identities=15% Similarity=0.140 Sum_probs=167.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... .+.+ .....++.++.+|++|++++.++++.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHH--HHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688999988642111 0000 01134688999999999999888742
Q ss_pred --CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+|+.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------- 154 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI--------- 154 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT---------
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC---------
Confidence 289999999998653 23344567889999999999998875 334 68999999987765332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...|.+++.++.+. +++++++|||.++++.... ...+.+......+.++ ..+.
T Consensus 155 -----~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~ 219 (255)
T 1fmc_A 155 -----NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPI---------RRLG 219 (255)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSS---------CSCB
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh-ccChHHHHHHHhcCCc---------ccCC
Confidence 34579999999999999887764 8999999999999875321 1123333333333321 2478
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKERRV 259 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~ 259 (676)
+++|+|++++.++..+ ..+++|++++|...|+
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 9999999999998653 2578999999887664
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.6e-24 Score=208.00 Aligned_cols=211 Identities=8% Similarity=0.076 Sum_probs=155.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHc--CCce-----------------eeccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKK--GIPF-----------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~--g~~v-----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
++|+|+||||+||||++|+++|+++ |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~ 80 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAV 80 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCC--CEEEEecccc
Confidence 3578999999999999999999999 7765 35678999999999999876 9999999965
Q ss_pred CCCC----------cchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 444 GRPN----------VDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 444 ~~~~----------~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
.... .....++....+++|+.++.+++++|++.++ ++|++||..++.. ..+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~---------------~~~~~~ 145 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP---------------DHPLNK 145 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT---------------TCGGGG
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC---------------CCcccc
Confidence 2100 0011112234679999999999999999887 6788888765421 001111
Q ss_pred --CCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcC--ceeccCCCccchhhHHHHHHHHHhcCC-
Q 005818 513 --GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYN--KVVNIPNSMTILDELLPISVEMAKRNL- 587 (676)
Q Consensus 513 --~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~v~D~a~~~~~~~~~~~- 587 (676)
.+.|+.+|..+|.+++. .+++++++||+.+||+......+..+. ........+++++|+|++++.+++++.
T Consensus 146 ~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~ 221 (253)
T 1xq6_A 146 LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEA 221 (253)
T ss_dssp GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccc
Confidence 14577899999999875 478999999999998742111111111 111112368999999999999998763
Q ss_pred -CceeEccCCC---cccHHHHHHHHHhhcCC
Q 005818 588 -SGIWNFTNPG---VVSHNEILEMYKAYIDP 614 (676)
Q Consensus 588 -~g~yn~~~~~---~~s~~e~~~~i~~~~g~ 614 (676)
+++||+++++ .+|+.|+++.+.+.+|.
T Consensus 222 ~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp TTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 4599999964 59999999999998875
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=201.92 Aligned_cols=239 Identities=18% Similarity=0.152 Sum_probs=175.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... ...+. ...++.++.+|++|++++.++++.
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIG---SPDVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC---CTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhC---CCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888888642111 00111 122789999999999999888742
Q ss_pred --CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++... .+..+||++||..+|....
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------- 161 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE------- 161 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT-------
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC-------
Confidence 279999999997642 1233456678999999999999988753 1257999999988876432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceE
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
.+...|+.+|...|.+++.++.+ +|++++++|||.++++..... ..............+. ...
T Consensus 162 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 228 (278)
T 2bgk_A 162 ------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKG 228 (278)
T ss_dssp ------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCS
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------ccc
Confidence 12456999999999999988765 589999999999999865321 1112222222111111 122
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHH
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVIDVATDICK 268 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~el~~~i~~ 268 (676)
.+++++|+|++++.++..+ ..++.|++.++...++.|+++.+.+
T Consensus 229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~ 275 (278)
T 2bgk_A 229 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKH 275 (278)
T ss_dssp CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCS
T ss_pred ccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhh
Confidence 5889999999999998643 3578999999999999999987654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=197.87 Aligned_cols=233 Identities=19% Similarity=0.125 Sum_probs=161.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCC-----CCCCeEEEEecCCCHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSR-----LSPNFKFIKGDVASADLV 73 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~-----~~~~v~~v~~Dl~d~~~~ 73 (676)
|...|++++||||||+|+||+++++.|+++ +++|++++|...... ...+.... ...++.++.+|++|++++
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 78 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAA 78 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHH
Confidence 666677899999999999999999999999 678999888643211 01111100 014688999999999998
Q ss_pred HHHHcc-----CCC-CEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCC
Q 005818 74 HFILLT-----EKI-DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 74 ~~~~~~-----~~~-d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~ 139 (676)
.++++. .++ |+|||+|+..... .+.+++...+++|+.++.++++++... +...+||++||...+.+
T Consensus 79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (264)
T 2pd6_A 79 RCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG 158 (264)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence 887743 245 9999999986532 244566788999999999999988753 21368999999755432
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCcee
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 216 (676)
.. +...|+.+|...|.+++.++.+ +|++++++|||.++++... .....+......+.+
T Consensus 159 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~--- 219 (264)
T 2pd6_A 159 NV--------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ--KVPQKVVDKITEMIP--- 219 (264)
T ss_dssp CT--------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCT---
T ss_pred CC--------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh--hcCHHHHHHHHHhCC---
Confidence 21 2456999999999999988776 6899999999999998652 111111111111111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHH
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVI 260 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~ 260 (676)
...+.+++|+|++++.++... ..++.+++.+|..++..
T Consensus 220 ------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~ 260 (264)
T 2pd6_A 220 ------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260 (264)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred ------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence 124789999999999998643 35788999988765443
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=189.37 Aligned_cols=202 Identities=21% Similarity=0.227 Sum_probs=139.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|+||+||||||||+||+++++.|+++| .++|++++|..... . .....+++++++|++|++++.+++ .++|+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~~--~----~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 91 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAKI--H----KPYPTNSQIIMGDVLNHAALKQAM--QGQDI 91 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGGS--C----SSCCTTEEEEECCTTCHHHHHHHH--TTCSE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhhh--c----ccccCCcEEEEecCCCHHHHHHHh--cCCCE
Confidence 567899999999999999999999993 28999998865321 1 112357999999999999999999 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+|+.... ...+.++++++++.+ +++||++||..+|+....... ...+.....+...|
T Consensus 92 vv~~a~~~~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~-~~~~~~~~~~~~~~---- 151 (236)
T 3qvo_A 92 VYANLTGEDL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFV-EWNNAVIGEPLKPF---- 151 (236)
T ss_dssp EEEECCSTTH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC-----------------CGGGHHH----
T ss_pred EEEcCCCCch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccc-cchhhcccchHHHH----
Confidence 9999985321 134678999999887 899999999999987654321 11222222233334
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC-ceEeeeeHHHHHHHHHHHHhcC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS-NVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+|+.+ +..|++++++|||.++++..... .....+. ....+++++|+|++++.+++.+
T Consensus 152 ~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~----------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~ 211 (236)
T 3qvo_A 152 RRAADAI----EASGLEYTILRPAWLTDEDIIDY----------------ELTSRNEPFKGTIVSRKSVAALITDIIDKP 211 (236)
T ss_dssp HHHHHHH----HTSCSEEEEEEECEEECCSCCCC----------------EEECTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred HHHHHHH----HHCCCCEEEEeCCcccCCCCcce----------------EEeccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence 3444443 35699999999999998754211 0111111 1125899999999999999876
Q ss_pred C--CCceEEEcCCC
Q 005818 244 E--VGHVYNIGTKK 255 (676)
Q Consensus 244 ~--~~~~y~i~~~~ 255 (676)
. .++.|+++++.
T Consensus 212 ~~~~g~~~~i~~~~ 225 (236)
T 3qvo_A 212 EKHIGENIGINQPG 225 (236)
T ss_dssp TTTTTEEEEEECSS
T ss_pred ccccCeeEEecCCC
Confidence 5 67899999875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-23 Score=205.14 Aligned_cols=246 Identities=15% Similarity=0.116 Sum_probs=177.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPS-RLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
.+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+... ....++.++.+|++|++++.++++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 345689999999999999999999999 688988888643211 1111111 1122688999999999998887743
Q ss_pred ----CCCCEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||... .+.+.+++...+++|+.++.++++++...- .-.+||++||...+....
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 159 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR------ 159 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT------
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC------
Confidence 27999999999732 223445667899999999999998876431 135999999987764432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|.++...................++ .
T Consensus 160 --------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~ 222 (281)
T 3svt_A 160 --------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------P 222 (281)
T ss_dssp --------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------S
T ss_pred --------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------C
Confidence 24579999999999999888765 699999999999987541100001122222222211 1
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc-HHHHHHHHHHHhCCCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR-VIDVATDICKLFSLNP 274 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s-~~el~~~i~~~~g~~~ 274 (676)
.+.+++|+|++++.++.... .++.|++.+|...+ ..++.+.+.+.++.+.
T Consensus 223 r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 223 RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 46789999999999986532 58899999998776 7788888888887653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-23 Score=203.38 Aligned_cols=232 Identities=16% Similarity=0.114 Sum_probs=165.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ... .....++.++++|++|++++.++++..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERAR--QAA-AEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHH-HHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHH-HHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 688988888642211 000 011346889999999999988877432
Q ss_pred -CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+||..... .+.+++...+++|+.++.++++++... +...+||++||...+.+..
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 150 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA---------- 150 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----------
Confidence 899999999986532 344566788899999999999887543 1135899999977664332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCC---CCceeecCCCceEe
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG---KPLPIHGDGSNVRS 225 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.++.++ |+++.+++||.++++... ....+....... .......+....+.
T Consensus 151 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 223 (259)
T 4e6p_A 151 ----LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD---GVDALFARYENRPRGEKKRLVGEAVPFGR 223 (259)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH---HHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred ----CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh---hhhhhhhhhccCChHHHHHHHhccCCCCC
Confidence 23469999999999999988764 899999999999998541 111111111111 00111111222346
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
+.+++|+|++++.++... -.+++|++.+|..+|
T Consensus 224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 889999999999888643 257899999886543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-21 Score=188.41 Aligned_cols=214 Identities=17% Similarity=0.184 Sum_probs=163.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE----- 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~----- 80 (676)
++++||||||+|+||+++++.|+++ +++|++.+|.... ....++.++.+|++|++++.++++..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~---------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKP---------SADPDIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCC---------CSSTTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhh---------cccCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 4689999999999999999999999 7889998886421 11237899999999999998887432
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------- 163 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMV----------- 163 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCC-----------
Confidence 899999999986532 344566788999999999999887 3434 57999999977654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
..+...|+.+|...+.+++.++.++ |+++.+++||.|+++.... .. ........+ ...+.++
T Consensus 164 -~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~----~~~~~~~~p---------~~r~~~~ 228 (260)
T 3un1_A 164 -GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-ET----HSTLAGLHP---------VGRMGEI 228 (260)
T ss_dssp -TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-GG----HHHHHTTST---------TSSCBCH
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-HH----HHHHhccCC---------CCCCcCH
Confidence 2235679999999999999998886 8999999999999986532 11 122222222 1247789
Q ss_pred HHHHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005818 230 EDVAEAFDTILHKGE-VGHVYNIGTKKER 257 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~-~~~~y~i~~~~~~ 257 (676)
+|+|++++.+.+... .+++|++.+|...
T Consensus 229 ~dva~av~~L~~~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 229 RDVVDAVLYLEHAGFITGEILHVDGGQNA 257 (260)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence 999999999855443 6889999988643
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-22 Score=201.31 Aligned_cols=243 Identities=14% Similarity=0.134 Sum_probs=172.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC-Cce--------------------eeccccCCChHHHHHHhhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG-IPF--------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g-~~v--------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
+|+|+||||||+||++++++|+++| ++| .++.+|+.|++++.++++++ |+|||+|+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGA--YATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcC--CEEEEeCCC
Confidence 4689999999999999999999998 765 45678999999999999987 999999984
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC-eeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATG-CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
. . . ...+.|+.++.+++++|++.+++.++++|+ .+++.. +. .+.+.|+.+|.
T Consensus 83 ~---~------~--~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~-------------~~---~~~~~y~~sK~ 135 (299)
T 2wm3_A 83 W---E------S--CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT-------------AG---RLAAAHFDGKG 135 (299)
T ss_dssp H---H------H--TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT-------------TT---SCCCHHHHHHH
T ss_pred C---c------c--ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC-------------CC---cccCchhhHHH
Confidence 3 1 0 123567889999999999999865555554 444211 01 13367999999
Q ss_pred HHHHHHHHccCeEEEEeeecccCCCCChHH--HHHHHH-hcCc-eecc--CC---CccchhhHHHHHHHHHhcC---CCc
Q 005818 522 MVEELLKEYDNVCTLRVRMPISSDLNNPRN--FITKIS-RYNK-VVNI--PN---SMTILDELLPISVEMAKRN---LSG 589 (676)
Q Consensus 522 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--~~~~~~-~~~~-~~~~--~~---~~~~v~D~a~~~~~~~~~~---~~g 589 (676)
.+|++++. .+++++++||+.+||+.. ++.... .+.. .+.. ++ +|+|++|+|++++.++..+ .++
T Consensus 136 ~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~ 211 (299)
T 2wm3_A 136 EVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQ 211 (299)
T ss_dssp HHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTC
T ss_pred HHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCe
Confidence 99999976 368899999999998732 111111 1211 1111 22 7899999999999999864 346
Q ss_pred eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhH-------------hccCCCccccChhHHHhhCCCCCCHHH
Q 005818 590 IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKV-------------IVAPRSNNELDASKLKKEFPELLSIKE 656 (676)
Q Consensus 590 ~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-------------~~~~~~~~~ld~~k~~~~~~~~~~~~~ 656 (676)
+||+++ +.+|+.|+++.+.+.+|.++.+.+++....... .... ....+....+.++..+.+|++
T Consensus 212 ~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~ 288 (299)
T 2wm3_A 212 NIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYAL--RPDRDIELTLRLNPKALTLDQ 288 (299)
T ss_dssp EEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTT--CCCCCHHHHHHHCTTCCCHHH
T ss_pred EEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHh--cCCCCHHHHHHhCCCCCCHHH
Confidence 999987 689999999999999999877766665443211 0000 011133322334444578999
Q ss_pred HHHHhh
Q 005818 657 SLIKNV 662 (676)
Q Consensus 657 ~l~~~~ 662 (676)
-+++..
T Consensus 289 ~~~~~~ 294 (299)
T 2wm3_A 289 WLEQHK 294 (299)
T ss_dssp HHHHHG
T ss_pred HHHhCh
Confidence 888864
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-23 Score=200.76 Aligned_cols=184 Identities=16% Similarity=0.087 Sum_probs=144.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCC--ce--------------eeccccCCChHHHHHHhhccCCCEEEECccccCCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGI--PF--------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~--~v--------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~ 447 (676)
+|+|+||||+||||++++++|+++|+ +| .++.+|++|++++.+++ +|+|||+|+.. .
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~----~d~vi~~a~~~---~ 77 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS----IDTAFCCLGTT---I 77 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC----CSEEEECCCCC---H
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh----hcEEEECeeec---c
Confidence 47899999999999999999999997 55 34667888877777666 59999999955 1
Q ss_pred cchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 448 VDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 448 ~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
....+++..+++|+.++.+++++|++.++ ++|++||..+|+ .|.+.|+.+|..+|++
T Consensus 78 --~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------------------~~~~~y~~sK~~~e~~ 135 (215)
T 2a35_A 78 --KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQA 135 (215)
T ss_dssp --HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHHH
T ss_pred --ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------------------CCccHHHHHHHHHHHH
Confidence 12456678899999999999999999987 577888877662 1346899999999999
Q ss_pred HHHccCeEEEE-eeecccCCCCChHH---HHHHHHhcCceeccC---CCccchhhHHHHHHHHHhcCCCceeEccCCCcc
Q 005818 527 LKEYDNVCTLR-VRMPISSDLNNPRN---FITKISRYNKVVNIP---NSMTILDELLPISVEMAKRNLSGIWNFTNPGVV 599 (676)
Q Consensus 527 ~~~~~~~~~l~-~~~~r~~~~~g~~~---~~~~~~~~~~~~~~~---~~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~ 599 (676)
++.+ +++ ++++||+.+|||.. ++..+. ....... .+++|++|+|++++.+++++.+|+||+++++.+
T Consensus 136 ~~~~----~~~~~~~vrp~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~i~~~~~~ 209 (215)
T 2a35_A 136 LQEQ----GWPQLTIARPSLLFGPREEFRLAEILA--APIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESDELR 209 (215)
T ss_dssp HTTS----CCSEEEEEECCSEESTTSCEEGGGGTT--CCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEEHHHHH
T ss_pred HHHc----CCCeEEEEeCceeeCCCCcchHHHHHH--HhhhhccCCCcCcEeHHHHHHHHHHHHhcCCCCceEEcHHHHH
Confidence 9753 688 99999999999852 222222 1111111 278999999999999999888889999998766
Q ss_pred cHH
Q 005818 600 SHN 602 (676)
Q Consensus 600 s~~ 602 (676)
++.
T Consensus 210 ~~~ 212 (215)
T 2a35_A 210 KLG 212 (215)
T ss_dssp HHH
T ss_pred Hhh
Confidence 554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-22 Score=196.67 Aligned_cols=239 Identities=15% Similarity=0.084 Sum_probs=159.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLN-PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+. ......++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 56789999999999999999999999 688998888642110 00000 011134688999999999998888742
Q ss_pred ---CCCCEEEEccccCCcC----C----cCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccc-cCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----N----SFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEV-YGETDED 143 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~----~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~v-yg~~~~~ 143 (676)
.++|+|||+||..... . +.+++...+++|+.++.++++++... + .+||++||... +.+..
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~-- 157 (278)
T 1spx_A 82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATP-- 157 (278)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCT--
T ss_pred HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCC--
Confidence 2899999999976432 1 44556788999999999999888653 3 79999999766 53322
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCCh-HHHH------HHHHHCCCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL-IPKF------ILLAMKGKP 213 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~-~~~~------~~~~~~~~~ 213 (676)
+...|+.+|...+.+++.++.+ +|+++++++||.+.++....... .... ........+
T Consensus 158 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p 225 (278)
T 1spx_A 158 ------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP 225 (278)
T ss_dssp ------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred ------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC
Confidence 2346999999999999987765 58999999999999885421100 0000 111111111
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCCcccHHHHHHHHHHHh
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKKERRVIDVATDICKLF 270 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~~s~~el~~~i~~~~ 270 (676)
. ..+.+++|+|++++.++..+ ..++.|++.+|...++.++++.+.+.+
T Consensus 226 --~-------~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 226 --A-------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp --T-------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred --C-------cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 0 14789999999999988642 358899999999999999998887653
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=204.31 Aligned_cols=239 Identities=15% Similarity=0.118 Sum_probs=169.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|...... ...+.. ....++.++.+|++|++++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISS-QTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHH-hcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 55689999999999999999999999 688999888642110 000000 0034689999999999998887743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++... ....+||++||...+.+..
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 172 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG-------- 172 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC--------
Confidence 278999999997543 2344566788999999999998877532 2247999999976654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCCCceeecCCCceEe
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.++.+ +|++++++|||.+++++..... ...........+.+. ..
T Consensus 173 ------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~~ 237 (302)
T 1w6u_A 173 ------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GR 237 (302)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SS
T ss_pred ------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------CC
Confidence 3457999999999999998877 6899999999999987431110 000111222232221 14
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHH
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERRVIDVATDICKL 269 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~~el~~~i~~~ 269 (676)
+.+++|+|++++.++.... .++.|++.+|..+++.++++.+.+.
T Consensus 238 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~ 284 (302)
T 1w6u_A 238 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKV 284 (302)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGC
T ss_pred CCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhh
Confidence 7889999999999986432 5789999999888887776655543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-21 Score=183.40 Aligned_cols=203 Identities=16% Similarity=0.127 Sum_probs=147.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHH-HcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLI-GNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+||++||||||||+||+++++.|+ ++ +++|++++|.... ..+.+. ....+++++.+|++|++++.+++ .++|
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~-~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~--~~~d 75 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKT-RIPPEI--IDHERVTVIEGSFQNPGXLEQAV--TNAE 75 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHH-HSCHHH--HTSTTEEEEECCTTCHHHHHHHH--TTCS
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccc-cchhhc--cCCCceEEEECCCCCHHHHHHHH--cCCC
Confidence 445679999999999999999999 77 6889999886420 111110 02457999999999999999999 7899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC-hhHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN-PYSA 162 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~-~Y~~ 162 (676)
+|||+|+.. |+. +.++++++++.+ +++||++||..+|+....... +.. ..... .|+.
T Consensus 76 ~vv~~ag~~---------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~----~~~-~~~~~~~y~~ 133 (221)
T 3r6d_A 76 VVFVGAMES---------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALE----KWT-FDNLPISYVQ 133 (221)
T ss_dssp EEEESCCCC---------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHH----HHH-HHTSCHHHHH
T ss_pred EEEEcCCCC---------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccc----ccc-ccccccHHHH
Confidence 999999853 344 899999999877 889999999999876442210 000 01123 6999
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC-CceEeeeeHHHHHHHHHHHH-
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG-SNVRSYLYCEDVAEAFDTIL- 240 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~D~a~ai~~~~- 240 (676)
+|..+|.+++ ..+++++++|||.++++..... ......+ .....+++.+|+|++++.++
T Consensus 134 ~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~ 194 (221)
T 3r6d_A 134 GERQARNVLR----ESNLNYTILRLTWLYNDPEXTD---------------YELIPEGAQFNDAQVSREAVVKAIFDILH 194 (221)
T ss_dssp HHHHHHHHHH----HSCSEEEEEEECEEECCTTCCC---------------CEEECTTSCCCCCEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH----hCCCCEEEEechhhcCCCCCcc---------------eeeccCCccCCCceeeHHHHHHHHHHHHH
Confidence 9999998875 3699999999999999732110 1111111 11124899999999999999
Q ss_pred -hcCC--CCceEEEcCCC
Q 005818 241 -HKGE--VGHVYNIGTKK 255 (676)
Q Consensus 241 -~~~~--~~~~y~i~~~~ 255 (676)
+.+. .++.+.+.++.
T Consensus 195 ~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 195 AADETPFHRTSIGVGEPG 212 (221)
T ss_dssp CSCCGGGTTEEEEEECTT
T ss_pred hcChhhhhcceeeecCCC
Confidence 7654 45677777543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=188.96 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=148.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d~V 85 (676)
+|+||||||+|+||+++++.|+ + +++|++++|... .+.+|++|+++++++++.. ++|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 3589999999999999999999 8 789999988531 4789999999999888542 68999
Q ss_pred EEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChh
Q 005818 86 MHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 160 (676)
Q Consensus 86 ih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 160 (676)
||+|+...... +.+++...++.|+.++.++++++...- +-.+||++||...+.+. .+...|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~~~~~Y 128 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI--------------VQGASA 128 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC--------------TTCHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC--------------CccHHH
Confidence 99999764321 233455778899999999999998751 01699999997665432 224579
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~ 238 (676)
+.+|...|.+++.++.+. |++++++|||.++++.. . .. +....+++++++|+|++++.
T Consensus 129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~-------~----~~---------~~~~~~~~~~~~dva~~~~~ 188 (202)
T 3d7l_A 129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD-------K----LE---------PFFEGFLPVPAAKVARAFEK 188 (202)
T ss_dssp HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-------H----HG---------GGSTTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-------h----hh---------hhccccCCCCHHHHHHHHHH
Confidence 999999999999887653 89999999999998742 0 00 11123468999999999998
Q ss_pred HHhcCCCCceEEEc
Q 005818 239 ILHKGEVGHVYNIG 252 (676)
Q Consensus 239 ~~~~~~~~~~y~i~ 252 (676)
+++....+++||+.
T Consensus 189 ~~~~~~~G~~~~vd 202 (202)
T 3d7l_A 189 SVFGAQTGESYQVY 202 (202)
T ss_dssp HHHSCCCSCEEEEC
T ss_pred hhhccccCceEecC
Confidence 88766677888873
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-21 Score=190.06 Aligned_cols=225 Identities=16% Similarity=0.087 Sum_probs=166.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|...+++|+||||||+|+||+++++.|+++ +++|++.+|...... ... .....++.++.+|++|++++.++++.
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (271)
T 3tzq_B 5 MTAELENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLA--GAA-ASVGRGAVHHVVDLTNEVSVRALIDFT 79 (271)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHH--HHH-HHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHH--HHH-HHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence 344456789999999999999999999999 678988888643211 000 01135688999999999999888743
Q ss_pred ----CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcC
Q 005818 80 ----EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|++||+|+.... +.+.+++...+++|+.++.++++++ ++.+ ..+||++||...+....
T Consensus 80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---- 154 (271)
T 3tzq_B 80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD---- 154 (271)
T ss_dssp HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS----
T ss_pred HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC----
Confidence 289999999998632 2345566789999999999999988 4444 57999999987764432
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.++++..... .............+.
T Consensus 155 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~-------- 215 (271)
T 3tzq_B 155 ----------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG-LPQPIVDIFATHHLA-------- 215 (271)
T ss_dssp ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT--------
T ss_pred ----------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc-CCHHHHHHHHhcCCC--------
Confidence 2456999999999999998887 589999999999999865311 112233333332221
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+...+|+|++++.++... -.|+.+++.+|.
T Consensus 216 -~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 216 -GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence 13678899999999998653 257899998883
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=190.31 Aligned_cols=227 Identities=15% Similarity=0.090 Sum_probs=162.9
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
|.-.+++++||||||+|+||+++++.|+++ +++|++++|..... +.+.. ...+++++.+|++|++++.++++..
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADL--DSLVR--ECPGIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHH--HSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH--HcCCCCEEEEeCCCHHHHHHHHHHc
Confidence 333456689999999999999999999999 67888888864211 11100 0125678899999999999998643
Q ss_pred -CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+|+..... .+.+++...+++|+.++.++.+++... +...+||++||...+....
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 144 (244)
T 3d3w_A 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT---------- 144 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC----------
Confidence 689999999976532 233456688999999999999887653 2147999999987764322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...|.+++.++.+ .++++++++||.++++........+........+.+ ...+++
T Consensus 145 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 211 (244)
T 3d3w_A 145 ----NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAE 211 (244)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBC
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcC
Confidence 2457999999999999988776 489999999999999753100000011112222211 125889
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
++|+|++++.+++.. ..++.|++.+|..
T Consensus 212 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 999999999999753 2577899988754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.6e-22 Score=194.41 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=162.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... .+.+. ....++.++.+|++|++++.++++.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLR--MEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 688999988642111 00000 1134689999999999998888743
Q ss_pred --CCCCEEEEccccCC-c----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+|+... . +.+.+++...+++|+.++.++++++.. .+ ..+||++||...+....
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 158 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNR------- 158 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCC-------
Confidence 37999999999764 1 123334567899999999999988764 23 57999999976654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
..|...|+.+|...|.+++.++.+ +|++++++|||.++++........+.+......+.+. ..
T Consensus 159 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~ 224 (260)
T 3awd_A 159 -----PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GR 224 (260)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SS
T ss_pred -----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CC
Confidence 123467999999999999998877 6899999999999998652000012233333322221 14
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+++++|+|++++.++... ..++.|++.+|.
T Consensus 225 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 789999999999998642 257789998874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-21 Score=187.60 Aligned_cols=226 Identities=15% Similarity=0.167 Sum_probs=158.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.+++|+||||||+|+||+++++.|+++ +++|++.+|...... ... .....++.++.+|++|++++.++++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGE--EPA-AELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHH--HHH-HHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 355689999999999999999999999 688888888653211 111 11245689999999999998888743
Q ss_pred -CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc---------CCCceEEEEecccccCCCC
Q 005818 80 -EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT---------GQIKRFIHVSTDEVYGETD 141 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~~v~~SS~~vyg~~~ 141 (676)
.++|++||+||.... ..+.+++...+++|+.++.++++++... +...++|++||...+.+..
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 289999999998753 2234567788999999999999988753 1246899999977664332
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeec
Q 005818 142 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 142 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|.++... .............. ++.
T Consensus 159 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~--p~~- 219 (257)
T 3tpc_A 159 --------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA--GMPQDVQDALAASV--PFP- 219 (257)
T ss_dssp --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCS--SSS-
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc--cCCHHHHHHHHhcC--CCC-
Confidence 2356999999999999888776 5899999999999987642 11112222221111 110
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKERR 258 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s 258 (676)
..+.+.+|+|++++.+++... .|+.+++.+|..++
T Consensus 220 -----~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 220 -----PRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp -----CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred -----CCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 247889999999999987643 67889998886543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=191.33 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=161.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
|+++||||||+|+||+++++.|+++ +++|++++|....... ..+. .....++.++.+|++|++++.++++.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHS-TTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 6789988886421110 0000 11234689999999999999888742
Q ss_pred -CCCCEEEEccccCCcC-------CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 -EKIDTIMHFAAQTHVD-------NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------ 150 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP------ 150 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC------
Confidence 2899999999976432 2334567888999999988776654 334 68999999987764332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...|.+++.++.+. |++++++|||.++++........+.+........+. .
T Consensus 151 --------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~ 213 (250)
T 2cfc_A 151 --------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------K 213 (250)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------C
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------C
Confidence 24569999999999999888765 899999999999998652100011233333333221 1
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+.+.+|+|++++.++..+. .++.+++.+|.
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp SCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 47899999999999987542 47789998774
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=188.23 Aligned_cols=214 Identities=18% Similarity=0.172 Sum_probs=161.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE----K 81 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~----~ 81 (676)
|+|+||||||+|+||+++++.|+++ +++|++++|... ...+.++.+|++|++++.++++.. +
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 66 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP 66 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc------------ccceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 3579999999999999999999999 688999888642 124588999999999998887432 8
Q ss_pred CCEEEEccccCCcCC----cCC----ChHHHHHHHHHHHHHHHHHHHHcC---------CCceEEEEecccccCCCCCCc
Q 005818 82 IDTIMHFAAQTHVDN----SFG----NSFEFTKNNIYGTHVLLEACKITG---------QIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~----~~~----~~~~~~~~nv~~~~~ll~a~~~~~---------~~~~~v~~SS~~vyg~~~~~~ 144 (676)
+|+|||+|+...... ..+ ++...+++|+.++.++++++...- ...+||++||...+.+..
T Consensus 67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 143 (242)
T 1uay_A 67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI--- 143 (242)
T ss_dssp EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence 999999999865321 112 567889999999999999887531 113999999988775432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...|.+++.++.+. |++++++|||.++++.... +...+........++ .
T Consensus 144 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~--~---- 204 (242)
T 1uay_A 144 -----------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASLAAQVPF--P---- 204 (242)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHHHTTCCS--S----
T ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc--cchhHHHHHHhhCCC--c----
Confidence 24569999999999998877664 8999999999999975421 222333333333221 0
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKER 257 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~ 257 (676)
..+++++|+|++++.+++... .++.|++.+|..+
T Consensus 205 --~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 205 --PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRM 239 (242)
T ss_dssp --CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred --ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence 147899999999999997633 5788999888644
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=193.00 Aligned_cols=198 Identities=16% Similarity=0.149 Sum_probs=150.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d~Vi 86 (676)
|+||||||+|+||++++++|+++ +|++++|..... +.+... ... +++.+|++|++++.++++. .++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~--~~~~~~--~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGAL--AELARE--VGA-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHH--HHHHHH--HTC-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHH--HHHHHh--ccC-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 57999999999999999999986 888888864211 111000 011 7889999999999988842 3899999
Q ss_pred EccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 87 HFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 87 h~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
|+|+.... +.+.+++...+++|+.++.++++++++.+ ..+||++||..+|.+.. +...|+.
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~~--------------~~~~Y~~ 136 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQVP--------------GFAAYAA 136 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSST--------------TBHHHHH
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC--------------CcchHHH
Confidence 99997653 23456677899999999999999996655 68999999988874332 3457999
Q ss_pred HHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHH
Q 005818 163 TKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTI 239 (676)
Q Consensus 163 sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~ 239 (676)
+|...|.+++.++.+ +|++++++|||.++++... +.+...+.+++++|+|++++.+
T Consensus 137 sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------------~~~~~~~~~~~~~dva~~~~~~ 195 (207)
T 2yut_A 137 AKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------------PLGGPPKGALSPEEAARKVLEG 195 (207)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------------GGTSCCTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------------ccCCCCCCCCCHHHHHHHHHHH
Confidence 999999999988876 5899999999999987521 0112224689999999999999
Q ss_pred HhcCCCCceEE
Q 005818 240 LHKGEVGHVYN 250 (676)
Q Consensus 240 ~~~~~~~~~y~ 250 (676)
++++..+.+++
T Consensus 196 ~~~~~~~~~~~ 206 (207)
T 2yut_A 196 LFREPVPALLE 206 (207)
T ss_dssp HC--CCCSCCC
T ss_pred HhCCCCccccc
Confidence 98776655543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=191.20 Aligned_cols=222 Identities=17% Similarity=0.115 Sum_probs=164.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHccC--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLTE-- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-- 80 (676)
+++|+||||||+|+||+++++.|+++ +++|++.++...... +.+. ......++.++++|++|++++.++++..
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKA-EAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVS 78 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688887776432110 0000 0112457889999999999988887432
Q ss_pred ---CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 81 ---KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 81 ---~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
++|+|||+||.... +.+.+++...+++|+.++.++++++ ++.+ ..+||++||...+.+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 149 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP-------- 149 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC--------
Confidence 89999999998653 2344566779999999999999988 4444 57999999976553322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+.+.++.+ +|+++.+++||.+.++... .+.+.+......+.++ ..+
T Consensus 150 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~r~ 212 (246)
T 3osu_A 150 ------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD--ALSDELKEQMLTQIPL---------ARF 212 (246)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS--CSCHHHHHHHHTTCTT---------CSC
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc--ccCHHHHHHHHhcCCC---------CCC
Confidence 2456999999999999888774 4899999999999998653 2334445555544332 146
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+.+|++++++.++.... .++.|++.+|.
T Consensus 213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 213 GQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 788999999999986532 47899998874
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-22 Score=195.69 Aligned_cols=228 Identities=15% Similarity=0.099 Sum_probs=164.9
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC--CC-CCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS--RL-SPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~-~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|.-.+++|+||||||+|+||+++++.|+++ +++|++.+|..... +..... .. ..++.++.+|++|++++.+++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRL--HEAARSLKEKFGVRVLEVAVDVATPEGVDAVV 76 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHHHHHCCCEEEEECCTTSHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 433456789999999999999999999999 67899888864211 100000 00 346889999999999988877
Q ss_pred cc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCc
Q 005818 78 LT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
+. .++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--- 152 (263)
T 3ai3_A 77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW--- 152 (263)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC---
Confidence 43 2799999999976432 24445678899999999999988742 34 57999999988775432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH-----------HHHHHHHHC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMK 210 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~-----------~~~~~~~~~ 210 (676)
+...|+.+|...+.+++.++.+ +|+++++++||.++++... ... ..+......
T Consensus 153 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 219 (263)
T 3ai3_A 153 -----------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI--KTAKELTKDNGGDWKGYLQSVAD 219 (263)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH--HHHHHHTTTTTCCHHHHHHHHHH
T ss_pred -----------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh--hhhHhhhcccCCcHHHHHHHHHh
Confidence 2346999999999999988876 5899999999999987531 111 111111111
Q ss_pred C-CCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 211 G-KPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 211 ~-~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
. .+ ...+.+++|+|++++.++..+. .++.|++.+|...+
T Consensus 220 ~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 220 EHAP---------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHCT---------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred cCCC---------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 1 11 1257899999999999987532 57899999886554
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=194.08 Aligned_cols=223 Identities=15% Similarity=0.118 Sum_probs=148.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... ...+ .....++.++.+|+.|++++.++++.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 678988888642111 0000 01134688999999999998888753
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..+||++||...+....
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 159 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS------- 159 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC-------
Confidence 5799999999976432 244456678999999999999988 3444 68999999977664322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.++.+. |++++++|||.++++..... ....+........ + ...
T Consensus 160 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~--~-------~~~ 222 (266)
T 1xq1_A 160 -------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-YDDEFKKVVISRK--P-------LGR 222 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh-cCHHHHHHHHhcC--C-------CCC
Confidence 24579999999999999887764 89999999999999865211 0111111111111 1 124
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+++++|++++++.++... ..++.|++.+|..
T Consensus 223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence 788999999999988643 2578899988754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=195.25 Aligned_cols=226 Identities=15% Similarity=0.050 Sum_probs=162.9
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC-CccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL-DYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~-~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|...+++++||||||+|+||+++++.|+++ +++|++++|. .... +.+.. .....++.++.+|++|++++.+++
T Consensus 1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (258)
T 3afn_B 1 MFPDLKGKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANI--DETIASMRADGGDAAFFAADLATSEACQQLV 76 (258)
T ss_dssp -CGGGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTH--HHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 444466789999999999999999999999 6889988886 2111 00000 011346889999999999998887
Q ss_pred ccC-----CCCEEEEcccc-CCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc--------CCCceEEEEecccccC-
Q 005818 78 LTE-----KIDTIMHFAAQ-THV----DNSFGNSFEFTKNNIYGTHVLLEACKIT--------GQIKRFIHVSTDEVYG- 138 (676)
Q Consensus 78 ~~~-----~~d~Vih~a~~-~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~v~~SS~~vyg- 138 (676)
+.. ++|+|||+|+. ... +.+.+++...+++|+.++.++++++... +...+||++||...+.
T Consensus 77 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 156 (258)
T 3afn_B 77 DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG 156 (258)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC
T ss_pred HHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC
Confidence 422 89999999997 322 1233345678899999999998876431 1126899999976653
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
+. .+...|+.+|...|.+++.++.+. |++++++|||.++++.... ..+.+......+.+.
T Consensus 157 ~~--------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~- 219 (258)
T 3afn_B 157 GG--------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD--KTQDVRDRISNGIPM- 219 (258)
T ss_dssp CC--------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT--CCHHHHHHHHTTCTT-
T ss_pred CC--------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc--cCHHHHHHHhccCCC-
Confidence 21 134579999999999999887764 8999999999999986532 223334444443321
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKK 255 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~ 255 (676)
..+++++|+|++++.++..+ ..++.|++.++.
T Consensus 220 --------~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 220 --------GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp --------CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred --------CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 25889999999999998653 257889998875
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=191.90 Aligned_cols=229 Identities=13% Similarity=0.049 Sum_probs=164.9
Q ss_pred CCCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
.+++|+||||||+ |+||+++++.|+++ +++|++.+|..... ..+.+... ...+.++.+|++|++++.++++.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEA--LGGALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHH--TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEECCCCCHHHHHHHHHHH
Confidence 3567899999999 99999999999999 68898888864210 11111000 12378899999999998887743
Q ss_pred ----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 155 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP----- 155 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-----
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC-----
Confidence 279999999997642 23455667899999999999999987641 025899999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|+++..........+........++
T Consensus 156 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 217 (261)
T 2wyu_A 156 ---------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL--------- 217 (261)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------
Confidence 23469999999999999887765 899999999999998642211223333333222221
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRV 259 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~ 259 (676)
..+.+++|+|++++.++... ..++.|++.+|...+.
T Consensus 218 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 13678999999999998642 2578999998865543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-20 Score=181.61 Aligned_cols=223 Identities=15% Similarity=0.048 Sum_probs=151.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++++|.... . ..++..+.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~------~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQ------E----QYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCS------S----CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhh------h----cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 6889988886421 1 11378899999999999888743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..+||++||...+.+..
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 141 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRI---------- 141 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC----------
Confidence 2799999999986432 244567789999999999999888 3444 57999999987664322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHH-HHHCCCCceeecCCCceEeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...|.+++.++.+. |+++++++||.++++............. ....... ..........+.
T Consensus 142 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~ 215 (250)
T 2fwm_X 142 ----GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIA 215 (250)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCc
Confidence 24569999999999999887763 8999999999999885421100000000 0000000 000000112478
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 216 RPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 9999999999998653 2578899988753
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=190.58 Aligned_cols=231 Identities=15% Similarity=0.087 Sum_probs=159.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+ ......++.++.+|++|++++.++++.
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEV-AGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHH-HTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHH-hhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 55689999999999999999999999 678999888432110 0000 011245789999999999999887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..+||++||...+.+..
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 171 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP------- 171 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC-------
Confidence 2899999999986532 244566788999999999999987 3333 57899999977654332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHH--HHCCCC-ceeecCCCc
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILL--AMKGKP-LPIHGDGSN 222 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.++ |+++.+++||.|.++.... ..+..... ...... ......+..
T Consensus 172 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p 242 (281)
T 3v2h_A 172 -------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK--QIPDQARTRGITEEQVINEVMLKGQP 242 (281)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------CCT
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh--hcchhhhhcCCCHHHHHHHHHHhcCC
Confidence 23469999999999999887764 8999999999999885421 11110000 000000 001122233
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+.+.+++|+|++++.++... -.|+.+++.+|.
T Consensus 243 ~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 243 TKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp TCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred CCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 346899999999999998653 268899998874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=185.55 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=163.8
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+.|++|+||||||+|+||+++++.|+++ +++|++.+|.................++.++++|++|++++.++++.
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999 68899888864321100000112245789999999999999888743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++.. .+...++|++||...+....
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 151 (257)
T 3imf_A 80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP-------- 151 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC--------
Confidence 289999999997543 234456778999999999999988732 22257999999977654332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCCCCCCCCh-HHHHHHHHHCCCCceeecCCCceE
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKL-IPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+++.++.+ +|+++.+++||.|.++....... ...+.+......+ ..
T Consensus 152 ------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~ 216 (257)
T 3imf_A 152 ------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP---------LG 216 (257)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST---------TC
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC---------CC
Confidence 2346999999999988877643 48999999999999886432111 1111122222211 12
Q ss_pred eeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005818 225 SYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKER 257 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~ 257 (676)
.+...+|+|++++.++.... .|+.+++.+|..+
T Consensus 217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 252 (257)
T 3imf_A 217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL 252 (257)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence 47889999999999986532 6889999988654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-21 Score=187.42 Aligned_cols=224 Identities=13% Similarity=0.102 Sum_probs=162.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++. +|...... ...+ .....++.++.+|++|+++++++++.
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEI--EKLGVKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHH--HhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 6888776 66432110 0001 11245789999999999998888743
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------- 149 (258)
T 3oid_A 78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLE------- 149 (258)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCT-------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCC-------
Confidence 279999999997543 23444566789999999999998874 323 46999999977664322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.+..+..........+........+. ..
T Consensus 150 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r 213 (258)
T 3oid_A 150 -------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GR 213 (258)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SS
T ss_pred -------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CC
Confidence 24569999999999999988774 799999999999887542222122233333222221 14
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
+.+++|+|++++.++.... .|+.+++.+|..
T Consensus 214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence 7889999999999987542 588999998864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=193.87 Aligned_cols=225 Identities=15% Similarity=0.054 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||++++++|+++ +++|++++|..... .+.+. ......++.++.+|++|++++.++++.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKA-AEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 67888888732111 00000 001135688999999999999888742
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEeccccc-CCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVY-GETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vy-g~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+ .+..
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 165 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------- 165 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC----------
Confidence 279999999997653 22344556789999999999999887641 01699999998776 3322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC-------C---ChH-HHHHHHHHCCCCceee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-------E---KLI-PKFILLAMKGKPLPIH 217 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~-------~---~~~-~~~~~~~~~~~~~~~~ 217 (676)
+...|+.+|...|.+++.+++++ ++++++++||.++++.... . ... .........+.
T Consensus 166 ----~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 236 (274)
T 1ja9_A 166 ----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----- 236 (274)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-----
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC-----
Confidence 23469999999999999888764 8999999999998763210 0 110 12222222221
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
..+.+++++|+|++++.++..+. .+++|++++|.
T Consensus 237 ----~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 237 ----PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ----CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 12358899999999999997532 57899998763
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-21 Score=193.24 Aligned_cols=237 Identities=17% Similarity=0.131 Sum_probs=165.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc----------CCC--CCCCCCCeEEEEecCCCHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK----------NLN--PSRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~----------~~~--~~~~~~~v~~v~~Dl~d~~~ 72 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|........ ... ......++.++++|++|+++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 45689999999999999999999999 68888888863211000 000 01124578999999999999
Q ss_pred HHHHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCC
Q 005818 73 VHFILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 73 ~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~ 139 (676)
+.++++. .++|++||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCC
Confidence 8888743 289999999998653 33455667889999999999998863 333 579999999776643
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCC---
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKP--- 213 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~--- 213 (676)
.. +...|+.+|...+.+++.++.+ +|+++.+++||.|+++..........+.........
T Consensus 165 ~~--------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 230 (281)
T 3s55_A 165 NF--------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDV 230 (281)
T ss_dssp CT--------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHH
T ss_pred CC--------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHH
Confidence 32 2456999999999999998886 489999999999999865321000000000000000
Q ss_pred -ceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 214 -LPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 214 -~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
..+.......+.+.+++|+|++++.++.... .++++++.+|...+
T Consensus 231 ~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 231 ESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 0000001112468899999999999997532 58899999986554
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=189.81 Aligned_cols=226 Identities=15% Similarity=0.115 Sum_probs=160.7
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.-.+++++||||||+|+||+++++.|+++ +++|++++|....... ..+. .....++.++.+|++|++++.++++
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIA-NKYGVKAHGVEMNLLSEESINKAFE 77 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHH-hhcCCceEEEEccCCCHHHHHHHHH
Confidence 444466789999999999999999999999 6889988886421100 0000 0013468899999999999988874
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|+|||+|+..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---- 152 (248)
T 2pnf_A 78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV---- 152 (248)
T ss_dssp HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT----
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC----
Confidence 2 2799999999976532 2344566889999999977776553 344 68999999975443221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...|.+++.++.+. ++++++++||.++++.... +...+........+
T Consensus 153 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~--------- 211 (248)
T 2pnf_A 153 ----------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV--LSEEIKQKYKEQIP--------- 211 (248)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCT---------
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh--ccHHHHHHHHhcCC---------
Confidence 23469999999999999887653 8999999999999886421 11222222222211
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+++++|++++++.++... ..++.|++.+|.
T Consensus 212 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 212 LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence 124789999999999998653 257889998763
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=190.63 Aligned_cols=227 Identities=16% Similarity=0.125 Sum_probs=161.9
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC-CCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-LDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r-~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|...+++++||||||+|+||+++++.|+++ +++|++.+| ...... .+.+ .....++.++.+|++|++++.+++
T Consensus 1 m~~~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~ 76 (261)
T 1gee_A 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEI--KKVGGEAIAVKGDVTVESDVINLV 76 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHH--HHTTCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHH
Confidence 444466789999999999999999999999 688888888 321110 0000 011346889999999999988877
Q ss_pred cc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCc
Q 005818 78 LT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
+. .++|+|||+|+..... .+.+++...+++|+.++.++++++... +...+||++||...+.+
T Consensus 77 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----- 151 (261)
T 1gee_A 77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP----- 151 (261)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----
Confidence 43 2899999999976532 234456688999999999988876543 21469999999765432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH--HHHHHHHHCCCCceeecC
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 219 (676)
..+...|+.+|...|.+++.++.++ +++++++|||.++++... ... +..........+
T Consensus 152 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~------ 214 (261)
T 1gee_A 152 ---------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA--EKFADPEQRADVESMIP------ 214 (261)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH--HHHHSHHHHHHHHTTCT------
T ss_pred ---------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh--hcccChhHHHHHHhcCC------
Confidence 2235579999999999988877654 899999999999988541 110 122222222211
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+++++|+|++++.++... ..++.+++.++..
T Consensus 215 ---~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 215 ---MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ---CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 124789999999999998642 2578899988753
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-21 Score=189.53 Aligned_cols=224 Identities=15% Similarity=0.072 Sum_probs=163.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+. .....++.++++|++|++++.++++.
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELG-ELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHT-TSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH-hhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 678998888653211 11111 11124789999999999998877643
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEeccccc-CCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVY-GETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vy-g~~~~~~~~~~ 148 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+ .+.
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~-------- 186 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY-------- 186 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBC--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCC--------
Confidence 389999999998653 23445667899999999999999873 444 5799999996542 111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
.+...|+.+|...+.+++.++.+ +|+++.+++||.|+++... .....+........++. .
T Consensus 187 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~~---------r 249 (293)
T 3rih_A 187 ------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV--DMGEEYISGMARSIPMG---------M 249 (293)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH--HTCHHHHHHHHTTSTTS---------S
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh--hccHHHHHHHHhcCCCC---------C
Confidence 12456999999999999988776 4899999999999987531 11123334444433321 3
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
+...+|++++++.++... -.|+++++.+|..+
T Consensus 250 ~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 250 LGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 567899999999998643 36889999888643
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=186.74 Aligned_cols=220 Identities=17% Similarity=0.178 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|+++ +|...... ...+ .....++.++.+|++|++++.++++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEF--KAAGINVVVAKGDVKNPEDVENMVKTAM 78 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHH--HHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888 44321110 0000 01134689999999999999887743
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEeccc-ccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDE-VYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~~ 147 (676)
.++|+|||+|+.... +.+.+++...+++|+.++.++++++.. .+ ..+||++||.. .|+..
T Consensus 79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 150 (247)
T 2hq1_A 79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA------- 150 (247)
T ss_dssp HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC-------
Confidence 289999999998642 235567788999999999998887753 34 57999999964 44322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...|.+++.++.+. ++++++++||.+.++... .+..........+.+ ..
T Consensus 151 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~---------~~ 211 (247)
T 2hq1_A 151 --------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD--VLPDKVKEMYLNNIP---------LK 211 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHTTST---------TS
T ss_pred --------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh--hcchHHHHHHHhhCC---------CC
Confidence 23569999999999999887764 899999999999876321 111222233333222 12
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+++++|++++++.++..+ ..+++|++.+|.
T Consensus 212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 212 RFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 4789999999999988653 257899998874
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-21 Score=189.63 Aligned_cols=229 Identities=12% Similarity=0.018 Sum_probs=162.3
Q ss_pred CCCC--CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHH
Q 005818 1 MATV--YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFI 76 (676)
Q Consensus 1 ~~~~--~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~ 76 (676)
|+.. +++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+. ....++.++.+|++|++++.++
T Consensus 1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~ 76 (260)
T 2ae2_A 1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWR--SKGFKVEASVCDLSSRSERQEL 76 (260)
T ss_dssp -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCccCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEcCCCCHHHHHHH
Confidence 5554 45689999999999999999999999 688988888642111 00000 1134688999999999998887
Q ss_pred Hcc------CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCC
Q 005818 77 LLT------EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 77 ~~~------~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~ 142 (676)
++. .++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 77 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~- 154 (260)
T 2ae2_A 77 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP- 154 (260)
T ss_dssp HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT-
T ss_pred HHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC-
Confidence 743 479999999997643 23445667889999999999998884 333 57999999977654322
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC---CCChHHHHHHHHHCCCCcee
Q 005818 143 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---PEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~---~~~~~~~~~~~~~~~~~~~~ 216 (676)
+...|+.+|...|.+++.++.+. |+++++++||.+.++... ................+
T Consensus 155 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (260)
T 2ae2_A 155 -------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA--- 218 (260)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---
Confidence 23569999999999999988764 899999999999876321 00000010011111111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
...+.+++|+|++++.++... ..++.+++.+|...
T Consensus 219 ------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 219 ------LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 124789999999999988643 25788999887543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-21 Score=189.99 Aligned_cols=231 Identities=17% Similarity=0.209 Sum_probs=162.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|+-..++++||||||+|+||+++++.|+++ +++|++.++...... .... ......++.++++|++|++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~ 77 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKET-YKDVEERLQFVQADVTKKEDLHKIVE 77 (264)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHH-TGGGGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCcccccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHH-HHhcCCceEEEEecCCCHHHHHHHHH
Confidence 443345689999999999999999999999 688888866542211 0000 01123468999999999999988874
Q ss_pred cC-----CCCEEEEccccCC------cCCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCC
Q 005818 79 TE-----KIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 79 ~~-----~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~ 143 (676)
.. ++|+|||+||... .+.+.+++...+++|+.++.++++++ ++.+ ..++|++||.+.++...
T Consensus 78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~-- 154 (264)
T 3i4f_A 78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPG-- 154 (264)
T ss_dssp HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCC--
T ss_pred HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCC--
Confidence 32 8999999999421 12344556788999999999999988 4444 57999999975542221
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
..+...|+.+|...+.+++.++.+ +|+++.+++||.++++... ..............
T Consensus 155 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~-------- 214 (264)
T 3i4f_A 155 ----------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE--ATIQEARQLKEHNT-------- 214 (264)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS--CCHHHHHHC-------------
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch--hccHHHHHHHhhcC--------
Confidence 123457999999999999988876 5899999999999998652 33333322221111
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
....+.+.+|+|++++.++... ..|+++++.+|-...
T Consensus 215 -p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 215 -PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp ----CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred -CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence 1124778999999999998753 258899999886433
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=189.26 Aligned_cols=231 Identities=12% Similarity=0.129 Sum_probs=164.0
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|...+++++||||||+|+||+++++.|+++ +++|++.+|.................++.++++|++|++++.++++.
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 445567799999999999999999999999 68899988864211100000011245789999999999998887743
Q ss_pred ----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.+++...+++|+.++.++++++...- +-.++|++||...+....
T Consensus 83 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 155 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA------- 155 (264)
T ss_dssp HHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT-------
T ss_pred HHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC-------
Confidence 279999999987532 33445677889999999999998865321 015999999977654332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC---------ChHHHHHHHHHCCCCcee
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE---------KLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~ 216 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|+++..... .....+......+.+
T Consensus 156 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 225 (264)
T 3ucx_A 156 -------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD--- 225 (264)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS---
T ss_pred -------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC---
Confidence 2346999999999999988876 589999999999988743100 001122222222222
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+.+++|+|++++.++... -.++.+++.+|..
T Consensus 226 ------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 226 ------LKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp ------SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred ------cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 224789999999999998643 3688999988863
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=189.66 Aligned_cols=233 Identities=18% Similarity=0.134 Sum_probs=162.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-----------ccCCC--CCCCCCCeEEEEecCCCHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-----------LKNLN--PSRLSPNFKFIKGDVASAD 71 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----------~~~~~--~~~~~~~v~~v~~Dl~d~~ 71 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+... ......++.++.+|++|++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 45689999999999999999999999 788888887421110 00000 0112457899999999999
Q ss_pred HHHHHHcc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccC
Q 005818 72 LVHFILLT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYG 138 (676)
Q Consensus 72 ~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg 138 (676)
+++++++. .++|++||+||..... .+.+++...+++|+.++.++++++.. .+...+||++||...+.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence 99888743 3899999999987532 24456678899999999999988743 22246899999977664
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
.... ...|+.+|...+.+++.++.+ +|+++.+++||.|.++..........+.........+.
T Consensus 171 ~~~~--------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 236 (280)
T 3pgx_A 171 ATPG--------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP 236 (280)
T ss_dssp CCTT--------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSC
T ss_pred CCCC--------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhh
Confidence 3322 346999999999999988876 58999999999999987532111111111100001111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
... .... .+.+++|+|++++.++... -.|+.+++.+|.
T Consensus 237 ~~~-~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 237 PMP-VQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp CBT-TBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hcc-cCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 111 1112 3889999999999998643 257889998774
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.7e-21 Score=187.96 Aligned_cols=228 Identities=15% Similarity=0.103 Sum_probs=165.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.................++.++.+|++|+++++++++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 68888888864221100000011245789999999999998887743
Q ss_pred CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 155 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV----------- 155 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT-----------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC-----------
Confidence 289999999998654 33445677889999999999999874 333 47999999987654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.+.++..... ..+...+......+. ..+.++
T Consensus 156 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~---------~r~~~~ 222 (256)
T 3gaf_A 156 ---RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV-LTPEIERAMLKHTPL---------GRLGEA 222 (256)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-CCHHHHHHHHTTCTT---------SSCBCH
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc-cCHHHHHHHHhcCCC---------CCCCCH
Confidence 24569999999999999888764 89999999999987632100 011222333333221 247889
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTKKERRV 259 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~ 259 (676)
+|+|++++.++... -.|+++++.+|...++
T Consensus 223 ~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 223 QDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred HHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 99999999998643 2588999999876654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=184.97 Aligned_cols=220 Identities=16% Similarity=0.135 Sum_probs=160.4
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|...+++++||||||+|+||+++++.|+++ +++|++.+|...... .... ....++.++.+|++|++++.++++.
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~ 75 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGK--AMAA-ELADAARYVHLDVTQPAQWKAAVDTA 75 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHH-HTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHH-HhhcCceEEEecCCCHHHHHHHHHHH
Confidence 666677899999999999999999999999 688988888642211 0000 0112478899999999999888742
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++ ++.+ ..+||++||...+.+..
T Consensus 76 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 148 (260)
T 1nff_A 76 VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV------ 148 (260)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC------
Confidence 2899999999976532 234456788999999997766554 3444 57999999987764432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...|.+++.++.+ +|++++++|||.++++... + ....+. .. ...
T Consensus 149 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~---------~~~~~~--~~--~~~ 204 (260)
T 1nff_A 149 --------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---W---------VPEDIF--QT--ALG 204 (260)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---T---------SCTTCS--CC--SSS
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc---c---------chhhHH--hC--ccC
Confidence 2346999999999999988776 5899999999999988542 1 000010 00 112
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+.+++|+|++++.++... ..++.|++.+|..
T Consensus 205 ~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~ 239 (260)
T 1nff_A 205 RAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV 239 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence 4788999999999998653 2578999988854
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=186.13 Aligned_cols=223 Identities=14% Similarity=0.076 Sum_probs=163.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+. .....++.++++|++|+++++++++.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLD-QLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-TTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 678998888643211 01111 11124789999999999998887743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEeccccc-CCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVY-GETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vy-g~~~~~~~~~~ 148 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++... + ..++|++||...+ .+
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~--------- 154 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG--------- 154 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC---------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC---------
Confidence 289999999998653 2344566778999999999999887654 4 5799999996542 11
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
..+...|+.+|...+.+++.++.+ +|+++.+++||.|.++.... .............+. ..
T Consensus 155 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~r 218 (262)
T 3pk0_A 155 -----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE--NGEEYIASMARSIPA---------GA 218 (262)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT--TCHHHHHHHHTTSTT---------SS
T ss_pred -----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc--cCHHHHHHHHhcCCC---------CC
Confidence 112457999999999999998887 58999999999999874321 112333333333221 13
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+...+|+|++++.++... -.|+.+++.+|..
T Consensus 219 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 219 LGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQV 252 (262)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence 678899999999998643 3688999988864
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.7e-21 Score=190.20 Aligned_cols=237 Identities=17% Similarity=0.136 Sum_probs=166.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc----------cCCC--CCCCCCCeEEEEecCCCHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL----------KNLN--PSRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~----------~~~~--~~~~~~~v~~v~~Dl~d~~~ 72 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|....... .... ......++.++++|++|+++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 55789999999999999999999999 6888888876321100 0000 00123578999999999999
Q ss_pred HHHHHcc-----CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCC
Q 005818 73 VHFILLT-----EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 73 ~~~~~~~-----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~ 143 (676)
+.++++. .++|++||+||........+++...+++|+.++.++++++.. .+...+||++||...+.+...
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 167 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS- 167 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-
Confidence 9888743 289999999998766555667788999999999999998753 222368999999776543211
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHH-HHHHCCCCceeecC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFI-LLAMKGKPLPIHGD 219 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 219 (676)
+..+...|+.+|...+.+++.++.++ |+++.+++||.|.++..... ...... ..............
T Consensus 168 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (278)
T 3sx2_A 168 ---------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE-FTREWLAKMAAATDTPGAMGN 237 (278)
T ss_dssp ---------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH-HHHHHHHHHHHHCC--CTTSC
T ss_pred ---------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh-hHHHHHhhccchhhhhhhhhh
Confidence 11123469999999999999887764 79999999999999865321 111111 11111111111122
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
... ..+++++|+|++++.++... -.|+.+++.+|.
T Consensus 238 ~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 238 AMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp SSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 222 46889999999999998643 367899998874
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=189.04 Aligned_cols=227 Identities=17% Similarity=0.169 Sum_probs=152.7
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE- 80 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~- 80 (676)
+++++++||||||+|+||+++++.|+++ +++|++. .|.................++.++.+|++|++++.++++..
T Consensus 22 ~m~~~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD 99 (272)
T ss_dssp --CCSCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3445678999999999999999999999 6777666 44321110000000112356899999999999998887432
Q ss_pred ----CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc------CCCceEEEEecccccCCCCCCcC
Q 005818 81 ----KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT------GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 81 ----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
++|+|||+||.... +.+.+++...+++|+.++.++++++... ++..+||++||...+.....
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--- 176 (272)
T 4e3z_A 100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT--- 176 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT---
T ss_pred HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC---
Confidence 89999999998653 1244566789999999999999887643 12468999999766533221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.++ |+++.+++||.|.++..... ..+..........+
T Consensus 177 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~--------- 236 (272)
T 4e3z_A 177 ----------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVP--------- 236 (272)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCT---------
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCC---------
Confidence 12459999999999998887765 89999999999998864321 11122222211111
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
...+.+++|+|++++.++... ..++.|++.+|
T Consensus 237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 123667999999999998643 25789999876
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=183.84 Aligned_cols=225 Identities=14% Similarity=0.054 Sum_probs=164.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|.................++.++.+|++|+++++++++.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 68899888864221100000011245789999999999998887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 149 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNP---------- 149 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC----------
Confidence 279999999998753 234456678999999999999987653 23 46999999976654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+..+... .+............+ ...+.+
T Consensus 150 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~---------~~~~~~ 214 (247)
T 3lyl_A 150 ----GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD--KLTDEQKSFIATKIP---------SGQIGE 214 (247)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT--TSCHHHHHHHHTTST---------TCCCBC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccch--hccHHHHHHHhhcCC---------CCCCcC
Confidence 2456999999999998887775 4899999999999988653 222233333332222 125789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
++|+|++++.++... -.++.|++.+|..+
T Consensus 215 ~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 215 PKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 999999999998643 25889999887543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=183.89 Aligned_cols=222 Identities=14% Similarity=0.010 Sum_probs=159.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... .... ....++.++++|++|++++.++++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~-~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQ--AVVA-GLENGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHH-TCTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHH-HHhcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 34589999999999999999999999 678998888642211 1000 0112678899999999999888742
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... +...+||++||...+.+..
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 154 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP---------- 154 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC----------
Confidence 2899999999976432 234456788999999999999887642 2147999999977653321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH-----------HHHHHHHHCCCCceee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGKPLPIH 217 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 217 (676)
+...|+.+|...+.+++.++.+. |+++++++||.++++... ... ...........+
T Consensus 155 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p---- 224 (263)
T 3ak4_A 155 ----LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE--REIIWEAELRGMTPEAVRAEYVSLTP---- 224 (263)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH--HHHHHHHHHHTSCHHHHHHHHHHTCT----
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh--hhccccccccccCcHHHHHHHHhcCC----
Confidence 24569999999999998887764 899999999999987431 110 111111111111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+++++|+|++++.++..+ ..++.|++.+|..
T Consensus 225 -----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 225 -----LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred -----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 124889999999999998653 2578999988753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-20 Score=181.62 Aligned_cols=204 Identities=13% Similarity=0.064 Sum_probs=145.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
|++++||||||+|+||+++++.|+++|..++|++++|..... +.+... ...++.++.+|++|++++.++++..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~--~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH--HHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 457899999999999999999999994228999998864322 111111 2457999999999999988887432
Q ss_pred ---CCCEEEEccccCC-c----CCcCCChHHHHHHHHHHHHHHHHHHHHc----------CC----CceEEEEecccccC
Q 005818 81 ---KIDTIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKIT----------GQ----IKRFIHVSTDEVYG 138 (676)
Q Consensus 81 ---~~d~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~----~~~~v~~SS~~vyg 138 (676)
++|+|||+|+... . ..+.+++...+++|+.++.++++++... +. ..+||++||...+.
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 8999999999865 2 2234456678999999999999887543 11 47999999977654
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
.... ...+..+...|+.+|...|.+++.++.++ |+++.+++||.+.++....
T Consensus 158 ~~~~-------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------ 212 (250)
T 1yo6_A 158 TDNT-------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------ 212 (250)
T ss_dssp TTCC-------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred CCcc-------cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------
Confidence 4321 11122345679999999999999988775 8999999999997764310
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+++.+|+|++++.+++...
T Consensus 213 --------~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 213 --------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp --------------HHHHHHHHHHHTTCC
T ss_pred --------CCCCCHHHHHHHHHHHHhccc
Confidence 135788999999999997654
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-21 Score=190.61 Aligned_cols=224 Identities=16% Similarity=0.091 Sum_probs=161.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+ .....++..+.+|+.|++++.++++.
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATL--QGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678999888642111 0000 01134688999999999998877742
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...|.+..
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 159 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFP------- 159 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT-------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCC-------
Confidence 289999999997531 23444567889999999999998874 333 67999999988775432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH--HHHHHHHHCCCCceeecCCCce
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.+.++... ... .......... . ..
T Consensus 160 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~--~-------~~ 221 (260)
T 2zat_A 160 -------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ--VLWMDKARKEYMKES--L-------RI 221 (260)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH--HHHSSHHHHHHHHHH--H-------TC
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch--hcccChHHHHHHHhc--C-------CC
Confidence 23469999999999999887764 899999999999887531 000 0000111110 1 11
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
+.+.+++|+|++++.++..+. .+++|++.+|...+
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 247889999999999986532 57899999987654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=184.53 Aligned_cols=231 Identities=16% Similarity=0.122 Sum_probs=164.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++++|...... .+.+. .....++.++.+|++|++++.++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVG-KEFGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHH-HHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHH-HhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999 688999988542211 00000 00134689999999999998877643
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++++++... +...+||++||...+......
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------ 162 (265)
T 1h5q_A 89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------ 162 (265)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc------
Confidence 3699999999986532 234456678999999999999987643 223789999998766433210
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
..+..+...|+.+|...|.+++.++.+. |++++++|||.++++.... ..+..........+. ..+
T Consensus 163 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~ 230 (265)
T 1h5q_A 163 -LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH--MDKKIRDHQASNIPL---------NRF 230 (265)
T ss_dssp -TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCTT---------SSC
T ss_pred -ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc--cchhHHHHHHhcCcc---------cCC
Confidence 1123346689999999999999887763 8999999999999886421 112222222222111 137
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
++++|+|++++.++..+ ..++.|++.+|..
T Consensus 231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 231 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 88999999999998653 3578899988753
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=192.83 Aligned_cols=208 Identities=12% Similarity=-0.012 Sum_probs=151.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee-----------ccccCCChHHHHHHhhcc--CCCEEEECccccCCCCcch
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY-----------GKGRLENRSQLLADIQNV--KPTHVFNAAGVTGRPNVDW 450 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~-----------~~~Dl~d~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~ 450 (676)
||+|+||||+||||++++++|+++|++|.. +.+|++|.++++++++.. ++|+|||+||.. .
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~---~--- 74 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG---V--- 74 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC---T---
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC---C---
Confidence 358999999999999999999999998743 457888899999888844 679999999965 1
Q ss_pred hccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCcccc-------C-------CCCC
Q 005818 451 CETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEE-------D-------KPNF 511 (676)
Q Consensus 451 ~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e-------~-------~~~~ 511 (676)
...+.+..+++|+.++.+++++|.+. + .++|++||..+|+.....+ ...+ + .+..
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAEL------PMVEAMLAGDEARAIELAEQQGQ 148 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGC------HHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccccc------chhhhhcccchhhhhhhccccCC
Confidence 12446788999999999999988764 3 5788999988875321110 0000 0 0113
Q ss_pred CCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--HHHHHHhcCc--ee-ccCCCccchhhHHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNK--VV-NIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~--~~-~~~~~~~~v~D~a~~~~~~~ 583 (676)
+.+.|+.||...|.+++.+.+. .++++.++||+.++++.. ++........ .. .....+++++|+|++++.++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 228 (255)
T 2dkn_A 149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLL 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 4578999999999999887543 579999999999999842 1111000000 00 02237899999999999999
Q ss_pred hcC---C-CceeEccCCCcccHHH
Q 005818 584 KRN---L-SGIWNFTNPGVVSHNE 603 (676)
Q Consensus 584 ~~~---~-~g~yn~~~~~~~s~~e 603 (676)
..+ . +++||++++..+++.|
T Consensus 229 ~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 229 GPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp SGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCCcccceeeEEEecCCeEeeeec
Confidence 765 2 3599999988777654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=185.04 Aligned_cols=224 Identities=12% Similarity=0.041 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+ .....++..+.+|++|++++.++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 688998888642111 0000 01134688999999999998887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------- 166 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP------- 166 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT-------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC-------
Confidence 4799999999986432 2344567788999999999998874 333 57999999988775432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCCh----HHHHHHHHHCCCCceeecCCC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL----IPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...+.+.+.++.+. |+++++++||.++++......- ............+.
T Consensus 167 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------- 232 (273)
T 1ae1_A 167 -------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------- 232 (273)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-------
T ss_pred -------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC-------
Confidence 23569999999999999887764 8999999999999986421100 01111222111111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+.+.+|+|++++.++... ..++.+++.+|..
T Consensus 233 --~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 233 --GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 13778999999999988642 2578899988753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=186.03 Aligned_cols=227 Identities=15% Similarity=0.087 Sum_probs=162.5
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+ |+||+++++.|+++ +++|++.+|..... ..+.+... .....++++|++|++++.++++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHh--cCCcEEEEccCCCHHHHHHHHHHHH
Confidence 345799999999 99999999999999 68898888864110 01111000 12347899999999998877742
Q ss_pred ---CCCCEEEEccccCCc--------C-CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------D-NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||.... + .+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 157 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 157 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-----
Confidence 278999999997652 1 3445667899999999999999997642 124899999976654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.++++..........+......+.++
T Consensus 158 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 219 (265)
T 1qsg_A 158 ---------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------- 219 (265)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------
Confidence 24569999999999999888775 899999999999998643222223333333222221
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKERR 258 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s 258 (676)
..+.+++|+|++++.++.... .++.|++.+|...+
T Consensus 220 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 220 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 136789999999999986432 57889999886443
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.4e-21 Score=186.21 Aligned_cols=224 Identities=13% Similarity=0.120 Sum_probs=159.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCe-EEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNF-KFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v-~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... ..... ...++ .++.+|++|++++.++++.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~--~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALD--RAAQE-LGAAVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHHH-HGGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHH-hcccceeEEEEecCCHHHHHHHHHHHHhh
Confidence 34579999999999999999999999 688999988642111 00000 02345 8899999999999887743
Q ss_pred CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||...... +.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 152 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNR---------- 152 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS----------
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCC----------
Confidence 47999999999865422 233456788999999887777653 344 68999999987764432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
..|...|+.+|...|.+++.++.+. |++++++|||.++++........+.+........+. ..+++
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 221 (254)
T 2wsb_A 153 --PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM---------GRCGE 221 (254)
T ss_dssp --SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT---------SSCBC
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC---------CCCCC
Confidence 1234679999999999999887765 899999999999987431000001222222222211 24789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
++|+|++++.++... ..++.+++.+|.
T Consensus 222 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 222 PSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 999999999998643 257889998764
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-20 Score=181.96 Aligned_cols=227 Identities=14% Similarity=0.084 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|.... . ..... . .. .++++|++|+++++++++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~--~~~~~-~-~~-~~~~~D~~~~~~~~~~~~~~~~~~ 75 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-K--EVAEA-I-GG-AFFQVDLEDERERVRFVEEAAYAL 75 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-H--HHHHH-H-TC-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-H--HHHHH-h-hC-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 6789888886532 1 10000 0 13 7899999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... ....+||++||...+.+..
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------- 144 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------- 144 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-----------
Confidence 3799999999986532 233456688999999999999877532 1257999999976653322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHH-CCCCceeecCCCceEeeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.+.++.. ..+..... ................+++
T Consensus 145 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T 2d1y_A 145 ---ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV------LEAIALSPDPERTRRDWEDLHALRRLGK 215 (256)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HHHHC--------CHHHHTTSTTSSCBC
T ss_pred ---CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh------hhccccccCCHHHHHHHHhcCCCCCCcC
Confidence 23469999999999999887764 89999999999976521 11100000 0000000111112235889
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKERRV 259 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~ 259 (676)
++|+|++++.++..+ ..++.|++.+|...++
T Consensus 216 ~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 216 PEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 999999999998754 3578999998865543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-21 Score=186.57 Aligned_cols=180 Identities=15% Similarity=0.067 Sum_probs=138.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCC--ce------------------eeccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGI--PF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~--~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
+|+|+||||+|+||++++++|+++|+ +| .++.+|++|++++.++++++ |+|||+||..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGH--DVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSC--SEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCC--CEEEECCCcc
Confidence 46899999999999999999999998 66 34568999999999888866 9999999954
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHH
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 522 (676)
.. ..+++..+++|+.++.+++++|++.++ ++|++||..+|+ .+.+.|+.+|..
T Consensus 96 ---~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~--------------------~~~~~Y~~sK~~ 149 (242)
T 2bka_A 96 ---RG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------------SSNFLYLQVKGE 149 (242)
T ss_dssp ---HH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHH
T ss_pred ---cc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC--------------------CCcchHHHHHHH
Confidence 11 223567889999999999999999886 778888877662 123679999999
Q ss_pred HHHHHHHccCeEEE-EeeecccCCCCChHH---HH----HHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC-ceeEc
Q 005818 523 VEELLKEYDNVCTL-RVRMPISSDLNNPRN---FI----TKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS-GIWNF 593 (676)
Q Consensus 523 ~E~~~~~~~~~~~l-~~~~~r~~~~~g~~~---~~----~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~-g~yn~ 593 (676)
+|.+++.+ ++ +++++||+.++||.. +. ..+....+.......+++++|+|++++.++.++.. |.|++
T Consensus 150 ~e~~~~~~----~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~ 225 (242)
T 2bka_A 150 VEAKVEEL----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELL 225 (242)
T ss_dssp HHHHHHTT----CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEE
T ss_pred HHHHHHhc----CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccccCeeEe
Confidence 99999875 34 799999999999841 11 11221111111123689999999999999988754 67776
Q ss_pred cC
Q 005818 594 TN 595 (676)
Q Consensus 594 ~~ 595 (676)
.+
T Consensus 226 ~~ 227 (242)
T 2bka_A 226 EN 227 (242)
T ss_dssp EH
T ss_pred eH
Confidence 55
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=187.30 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=157.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+. ....++.++.+|++|+++++++++.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIK--SFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHH--TTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHH--hcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 678888877532111 00110 1134688999999999999888743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------- 188 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV-------- 188 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT--------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC--------
Confidence 3799999999986532 2344566889999999888887775 334 57999999976553322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...|.+++.++.+. |+++++++||.+.++.... +...+........+. ..+
T Consensus 189 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~ 251 (285)
T 2c07_A 189 ------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIPA---------GRM 251 (285)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCTT---------SSC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh--cCHHHHHHHHhhCCC---------CCC
Confidence 23469999999999998887664 8999999999999885421 222333333322211 137
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
++++|+|++++.++..+ ..++.|++.+|.
T Consensus 252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 252 GTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 89999999999998653 257889998774
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-21 Score=187.20 Aligned_cols=219 Identities=16% Similarity=0.123 Sum_probs=154.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccc--cCCCCCCCCCCeEE-EEecCCCHHHHHHHHcc---
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNL--KNLNPSRLSPNFKF-IKGDVASADLVHFILLT--- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~--~~~~~~~~~~~v~~-v~~Dl~d~~~~~~~~~~--- 79 (676)
+|+||||||+|+||++++++|+++ +++|+++ +|....... ..+. ....++.. +.+|++|.++++++++.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEAR--RRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHH--HTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHH--hcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999 6888887 665321110 0000 01235566 89999999998887642
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHH----HHHHcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLE----ACKITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++.+ .+++.+ ..+||++||...+.+..
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------- 147 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP-------- 147 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS--------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC--------
Confidence 379999999997653 22344566889999999666555 444445 68999999975543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...|.+++.++++. |++++++|||.++++.... +...+........+ ...+
T Consensus 148 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~ 210 (245)
T 2ph3_A 148 ------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER--LPQEVKEAYLKQIP---------AGRF 210 (245)
T ss_dssp ------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHHTCT---------TCSC
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh--cCHHHHHHHHhcCC---------CCCC
Confidence 13469999999999998887764 8999999999999874321 11222222222221 1247
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
++++|+|++++.++..+ ..++.|++.+|.
T Consensus 211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 89999999999998653 247889998764
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-21 Score=188.44 Aligned_cols=227 Identities=13% Similarity=0.030 Sum_probs=162.4
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
..+++++||||||+|+||+++++.|+++ +++|++.+|.................++..+.+|++|++++.++++.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 3456789999999999999999999999 67899988864211100000001134678999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ -.+||++||...+....
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 172 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP-------- 172 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC--------
Confidence 2799999999986532 34456678899999999999988752 23 46899999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.|..+... .+............+ ...+
T Consensus 173 ------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~p---------~~r~ 235 (270)
T 3ftp_A 173 ------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK--GLPQEQQTALKTQIP---------LGRL 235 (270)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--HSCHHHHHHHHTTCT---------TCSC
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh--hcCHHHHHHHHhcCC---------CCCC
Confidence 2346999999999999888776 4899999999999876321 011122222222222 1247
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+.+|+|++++.++... -.|+++++.+|..+
T Consensus 236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence 78999999999988543 26889999988644
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=182.53 Aligned_cols=227 Identities=15% Similarity=0.123 Sum_probs=156.5
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|...|++++||||||+|+||+++++.|+++ +++|++.+|.......+.+ .....++.++++|++|++++.++++.
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (249)
T 2ew8_A 1 MTQRLKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAI--RNLGRRVLTVKCDVSQPGDVEAFGKQV 76 (249)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHH--HhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 556677899999999999999999999999 6889888886411110011 11234689999999999998877632
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++ ++.+ ..+||++||...+.+..
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 149 (249)
T 2ew8_A 77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE------ 149 (249)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC------
Confidence 4899999999976432 244556788999999998888774 4444 57999999987765432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.+. |+++++++||.+.++.... ...... ...... +.. ...
T Consensus 150 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~-~~~~~~--~~~-----~~~ 212 (249)
T 2ew8_A 150 --------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA-SALSAM-FDVLPN--MLQ-----AIP 212 (249)
T ss_dssp --------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C--TTS-----SSC
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh-ccccch-hhHHHH--hhC-----ccC
Confidence 23569999999999999887764 8999999999999875420 110000 000000 000 112
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 213 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 213 RLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred CCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 4788999999999998643 357889998774
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=180.76 Aligned_cols=221 Identities=19% Similarity=0.134 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
...++||||||+|+||+++++.|+++ +++|++.+|..... +.+. .....++.++.+|++|.+++.++++.. ++|
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKL--KSLG-NALKDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HHHCSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHH--HHHH-HHhccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 45789999999999999999999999 68899988864211 1110 011246889999999999999988654 799
Q ss_pred EEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+||.... ..+.+++...+++|+.++.++++++.. .+ ..+||++||...+....
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 151 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNP-------------- 151 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCS--------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCC--------------
Confidence 99999998653 345677889999999999999887742 23 46999999977664432
Q ss_pred CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+.++.... +..........+.+ ...+.+++|+
T Consensus 152 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~dv 220 (249)
T 3f9i_A 152 GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK--LNEKQREAIVQKIP---------LGTYGIPEDV 220 (249)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC--------CCHHHHHHHHHHCT---------TCSCBCHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc--cCHHHHHHHHhcCC---------CCCCcCHHHH
Confidence 2356999999999999888776 48999999999999875422 22222222222211 1257889999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 233 AEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 233 a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
|++++.++.... .|+.|++.+|..
T Consensus 221 a~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 221 AYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHcCCccCCccCcEEEECCCEe
Confidence 999999997532 578999988753
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-21 Score=193.18 Aligned_cols=207 Identities=14% Similarity=0.203 Sum_probs=153.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
||+|+|||||||||+++++.|+++|++| .++.+|+.|++++.++++++ |+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC--CEEE
Confidence 4789999999999999999999999765 24568999999999999987 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-CCc
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-GSF 515 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~~~ 515 (676)
|+|+.. .. ..|+.++.+++++|++.| ++++++| +|+..... + +.+..| .+.
T Consensus 82 ~~a~~~---~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~~~~-------~---~~~~~p~~~~ 134 (313)
T 1qyd_A 82 SALAGG---VL-----------SHHILEQLKLVEAIKEAGNIKRFLPS---EFGMDPDI-------M---EHALQPGSIT 134 (313)
T ss_dssp ECCCCS---SS-----------STTTTTHHHHHHHHHHSCCCSEEECS---CCSSCTTS-------C---CCCCSSTTHH
T ss_pred ECCccc---cc-----------hhhHHHHHHHHHHHHhcCCCceEEec---CCcCCccc-------c---ccCCCCCcch
Confidence 999955 11 137889999999999998 8777653 34322110 0 122233 456
Q ss_pred hhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHH--------hcCceeccCC-----CccchhhHHHHHHHH
Q 005818 516 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS--------RYNKVVNIPN-----SMTILDELLPISVEM 582 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~--------~~~~~~~~~~-----~~~~v~D~a~~~~~~ 582 (676)
| .+|..+|++++.. +++++++|++.++++. +..+. ..+.....++ +++|++|++++++.+
T Consensus 135 y-~sK~~~e~~~~~~----g~~~~ilrp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 207 (313)
T 1qyd_A 135 F-IDKRKVRRAIEAA----SIPYTYVSSNMFAGYF--AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS 207 (313)
T ss_dssp H-HHHHHHHHHHHHT----TCCBCEEECCEEHHHH--TTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHhc----CCCeEEEEeceecccc--ccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHH
Confidence 8 9999999999753 5888999987766532 11111 1112211211 789999999999999
Q ss_pred HhcCC--CceeEccCC-CcccHHHHHHHHHhhcCCCCcccccchHhh
Q 005818 583 AKRNL--SGIWNFTNP-GVVSHNEILEMYKAYIDPGFKWTNFTLEEQ 626 (676)
Q Consensus 583 ~~~~~--~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 626 (676)
++++. +++|++.++ +.+|+.|+++.+.+.+|.+..+..++.+..
T Consensus 208 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 254 (313)
T 1qyd_A 208 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDF 254 (313)
T ss_dssp TTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHH
T ss_pred HhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHHHH
Confidence 98763 467888765 789999999999999999887777775443
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=179.62 Aligned_cols=216 Identities=16% Similarity=0.150 Sum_probs=160.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
...+|+||||||+|+||+++++.|+++ +++|++.+|..... ...+..+++|++|++++.++++.
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKK 78 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 78899888854211 23578899999999998888743
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++.. .+ ..+||++||...|.....
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-------- 149 (269)
T 3vtz_A 79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKN-------- 149 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTT--------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCC--------
Confidence 2899999999986532 23445667889999999999987653 33 579999999887754332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCC---------CCChHHHHHHHHHCCCCceeecC
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
...|+.+|...+.+++.++.++ ++++.+++||.|.++... ................+
T Consensus 150 ------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------ 217 (269)
T 3vtz_A 150 ------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP------ 217 (269)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST------
T ss_pred ------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC------
Confidence 3469999999999999988876 799999999999876320 01111222222222111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+++|+|++++.++... -.|+++++.+|.
T Consensus 218 ---~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 218 ---MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ---CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence 124778999999999998643 368899999885
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=181.87 Aligned_cols=223 Identities=15% Similarity=0.087 Sum_probs=160.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|.........+. ....++.++.+|++|++++.++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIA--RHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHH--TTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHH--hcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 68899888865311111111 1134688899999999999888742
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++ ++.+ ..+||++||...+....
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST---------- 146 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC----------
Confidence 2899999999976432 234556788999999887777655 4444 68999999987764432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH---HHH---H----HHHHCCCCceeec
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI---PKF---I----LLAMKGKPLPIHG 218 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~---~~~---~----~~~~~~~~~~~~~ 218 (676)
+...|+.+|...+.+.+.++.+. |+++++++||.++++... ... ... . ......
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~------- 213 (255)
T 2q2v_A 147 ----GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ--KQIDDRAANGGDPLQAQHDLLAE------- 213 (255)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH--HHHHHHHHHTCCHHHHHHHHHTT-------
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh--hhcccccccccchHHHHHHHHhc-------
Confidence 13469999999999999888764 799999999999987431 111 000 0 111011
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
......+++++|+|++++.++..+ ..++.|++.+|..
T Consensus 214 -~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 214 -KQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp -TCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -cCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 111235889999999999988653 2478899988743
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-21 Score=190.86 Aligned_cols=212 Identities=15% Similarity=0.066 Sum_probs=154.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++|+||
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv 84 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLV 84 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 4689999999999999999999999765 56779999999999888865 679999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHH----HHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTL----TLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~----~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++....+++|+.|+. .++..+++.+. ++|++||...+. +..
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~ 146 (281)
T 3m1a_A 85 NNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL------------------SFA 146 (281)
T ss_dssp ECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------------CCT
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC------------------CCC
Confidence 9999652101 12234555678999999954 55555565554 778888765441 234
Q ss_pred CCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChH-------------HHHHHHHhcCcee--ccCCCccchh
Q 005818 512 TGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPR-------------NFITKISRYNKVV--NIPNSMTILD 573 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~-------------~~~~~~~~~~~~~--~~~~~~~~v~ 573 (676)
+.+.|+.||...|.+++.+... .++++..++|+.++++. .+........... .....+.+++
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 147 GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPA 226 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHH
Confidence 5578999999999999887433 68999999999887653 1122211111111 1223678899
Q ss_pred hHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcC
Q 005818 574 ELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 574 D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
|+|++++.+++.+. ++.|+++++....+.+....+.+.++
T Consensus 227 dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 227 KAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 99999999998874 46999999888888888888877654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-20 Score=178.71 Aligned_cols=221 Identities=15% Similarity=0.064 Sum_probs=160.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|.... .+.+. ...++.++.+|++|+++++++++.. ++|
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESK--LQELE---KYPGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HGGGG---GSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH---hccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 56789999999999999999999999 6889988886422 11111 1127899999999999998776543 799
Q ss_pred EEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..++|++||...+.... .
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------~ 142 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV-------------V 142 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-------------T
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC-------------C
Confidence 999999986532 23445667889999999999988753 33 57999999976654321 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...|.+++.++.+. |++++++|||.++++.... ...............+. ..+.+
T Consensus 143 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 213 (246)
T 2ag5_A 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFAT 213 (246)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEE
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC---------CCCCC
Confidence 23569999999999999887764 8999999999999874310 00001112222211111 13789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+|++++.++..+ ..++.+++.+|.
T Consensus 214 ~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 214 AEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 999999999998643 257889998774
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-19 Score=179.11 Aligned_cols=213 Identities=17% Similarity=0.143 Sum_probs=158.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++++|.... ..++.++++|++|++++.++++.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 6789988885421 34688999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... .+..+||++||...+....
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 141 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK----------- 141 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-----------
Confidence 2799999999976532 244566789999999999999887642 1257999999987764322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCCCCCChH-------H----HHHHHHHCCCCceeecC
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLI-------P----KFILLAMKGKPLPIHGD 219 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~ 219 (676)
+...|+.+|...+.+++.++.+++ +++++++||.+.++... .+. . ..........
T Consensus 142 ---~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------- 209 (264)
T 2dtx_A 142 ---NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR--KAAELEVGSDPMRIEKKISEWGHEH------- 209 (264)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH--HHHHHHHCSCHHHHHHHHHHHHHHS-------
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh--hhhhcccccCchhhHHHHHHHHhcC-------
Confidence 245699999999999999887765 89999999999765321 000 0 1111111111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
....+++++|+|++++.++... ..++.+++.+|.
T Consensus 210 --p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 210 --PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp --TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 1124789999999999998653 357889998874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=184.34 Aligned_cols=224 Identities=15% Similarity=0.057 Sum_probs=160.8
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+ |+||+++++.|+++ +++|++.+|..... ..+.+... ..++.++.+|++|++++.++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKG--FGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 345799999999 99999999999999 68898888864210 01111000 12367899999999998887743
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++...- +..+||++||...+....
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 169 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----- 169 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-----
Confidence 279999999998643 23445667899999999999999987642 126999999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.++ |+++++++||.|.++..........+........++
T Consensus 170 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 231 (285)
T 2p91_A 170 ---------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF--------- 231 (285)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------
Confidence 24569999999999999887764 899999999999998653222223333332222211
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+.+++|+|++++.++... ..++.|++.++.
T Consensus 232 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 232 GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 13678999999999998642 257789998874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.83 E-value=8.9e-21 Score=185.18 Aligned_cols=220 Identities=17% Similarity=0.103 Sum_probs=157.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+|+||||||+|+||++++++|+++ +++|++. +|...... ...+ .....++.++.+|++|++++.++++.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQI--EAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHH--HHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHH--HhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999 6788874 66432110 0000 00134688999999999999888743
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++++++... .+..+||++||...+.+..
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 146 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI---------- 146 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC----------
Confidence 2799999999986532 233456678999999999999888653 1257999999975543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+ .|++++++|||.++++.... +...+........+. ..+++
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~---------~~~~~ 211 (244)
T 1edo_A 147 ----GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK--LGEDMEKKILGTIPL---------GRTGQ 211 (244)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT--TCHHHHHHHHTSCTT---------CSCBC
T ss_pred ----CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh--cChHHHHHHhhcCCC---------CCCCC
Confidence 2356999999999999887776 48999999999999874321 112222333322211 24789
Q ss_pred HHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG----EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~----~~~~~y~i~~~~ 255 (676)
++|+|++++.++.++ ..++.|++.+|.
T Consensus 212 ~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 212 PENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 999999999998433 257889998774
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=184.65 Aligned_cols=221 Identities=15% Similarity=0.105 Sum_probs=158.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC-CCccccccCCCCC---CCCCCeEEEEecCCCH----HHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK-LDYCSNLKNLNPS---RLSPNFKFIKGDVASA----DLVHFI 76 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r-~~~~~~~~~~~~~---~~~~~v~~v~~Dl~d~----~~~~~~ 76 (676)
|++++||||||+|+||+++++.|+++ +++|++.+| ..... +.+... ....++.++.+|++|+ +++.++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 84 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAA--QRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI 84 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH--HHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHH--HHHHHHHHHhcCCceEEEeccCCCccccHHHHHHH
Confidence 55689999999999999999999999 688998888 43111 000000 0034688999999999 888777
Q ss_pred Hcc-----CCCCEEEEccccCCcC----CcC-----------CChHHHHHHHHHHHHHHHHHHHHcC--CC------ceE
Q 005818 77 LLT-----EKIDTIMHFAAQTHVD----NSF-----------GNSFEFTKNNIYGTHVLLEACKITG--QI------KRF 128 (676)
Q Consensus 77 ~~~-----~~~d~Vih~a~~~~~~----~~~-----------~~~~~~~~~nv~~~~~ll~a~~~~~--~~------~~~ 128 (676)
++. .++|+|||+||..... .+. +++...+++|+.++.++++++...- .. .+|
T Consensus 85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i 164 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV 164 (276)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 642 2799999999976432 222 4556789999999999999987631 13 699
Q ss_pred EEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHH
Q 005818 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFI 205 (676)
Q Consensus 129 v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~ 205 (676)
|++||...+.+.. +...|+.+|...+.+++.++.+. |+++.+++||.+.++ . .+.....
T Consensus 165 v~isS~~~~~~~~--------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~---~~~~~~~ 226 (276)
T 1mxh_A 165 VNLCDAMTDLPLP--------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P---AMPQETQ 226 (276)
T ss_dssp EEECCGGGGSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S---SSCHHHH
T ss_pred EEECchhhcCCCC--------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c---cCCHHHH
Confidence 9999987764322 23469999999999999887764 899999999999998 3 1222333
Q ss_pred HHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 206 LLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.......+ . + +.+.+++|+|++++.++.... .++.+++.+|.
T Consensus 227 ~~~~~~~p--~---~---r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 227 EEYRRKVP--L---G---QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp HHHHTTCT--T---T---SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhcCC--C---C---CCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 33333221 1 1 127899999999999986432 57889998874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.5e-20 Score=177.83 Aligned_cols=216 Identities=18% Similarity=0.148 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---CC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---EK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---~~ 81 (676)
.++|+||||||+|+||+++++.|++++ +++|++.+|... .....+.++++|++|++++.++++. .+
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~-g~~v~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNK-NHTVINIDIQQS----------FSAENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTST-TEEEEEEESSCC----------CCCTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcC-CcEEEEeccccc----------cccccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 356799999999999999999999943 788888887532 1234678999999999999888732 27
Q ss_pred CCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 82 ~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
+|++||+||.... +.+.+++...+++|+.++.++++++...- +-.++|++||...+.....
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------------- 136 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-------------- 136 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT--------------
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC--------------
Confidence 9999999998643 33455667889999999999999987642 1148999999877644322
Q ss_pred CChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHH-----------HHHHHHCCCCceeecCCCc
Q 005818 157 TNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPK-----------FILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.+|...+.+.+.++.+ +|+++.+++||.|.++... ..... .........+
T Consensus 137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p--------- 205 (244)
T 4e4y_A 137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR--NLIQKYANNVGISFDEAQKQEEKEFP--------- 205 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH--HHHHHHHHHHTCCHHHHHHHHHTTST---------
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH--HHHHhhhhhcCCCHHHHHHHHhhcCC---------
Confidence 346999999999999988874 4899999999999876321 11111 1222222211
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+.+++|+|++++.++... -.++.+++.+|..
T Consensus 206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 124788999999999998643 2578999988743
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=187.98 Aligned_cols=248 Identities=12% Similarity=0.023 Sum_probs=167.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC------------CCCCCCCeEEEEecCCCHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN------------PSRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~------------~~~~~~~v~~v~~Dl~d~~~ 72 (676)
+++++||||||+|+||+++++.|+++ +++|++++|........... ......++.++++|++|+++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 44689999999999999999999999 68888888763211110000 01124578999999999999
Q ss_pred HHHHHcc-----CCCCEEEEccccCCcC--CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCc
Q 005818 73 VHFILLT-----EKIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 73 ~~~~~~~-----~~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~ 144 (676)
+.++++. .++|+|||+||..... .+.+++...+++|+.++.++++++...- +-.++|++||...+......+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence 8887743 2899999999986543 3456677899999999999999987642 235899999977664332111
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCc-----ee
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPL-----PI 216 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-----~~ 216 (676)
. .+..+..+...|+.+|...+.+++.++.++ |+++.+++||.|.++..........+... ...... ..
T Consensus 166 ~---~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (287)
T 3pxx_A 166 G---AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPD-LEAPSRADALLAF 241 (287)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTT-SSSCCHHHHHHHG
T ss_pred c---ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccc-cccchhHHHHhhh
Confidence 1 122222234579999999999999988775 89999999999998865311110000000 000000 00
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
.........+.+++|+|++++.++... -.|+.+++.+|..++
T Consensus 242 ~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp GGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 000111136889999999999998543 368899999886543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=184.69 Aligned_cols=228 Identities=18% Similarity=0.091 Sum_probs=165.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+ .....++.++.+|++|++++.++++.
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEI--AGGGGEAAALAGDVGDEALHEALVELAVR 81 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHH--TTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688999988643211 0111 12245789999999999998887743
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||.... ..+.+++...+++|+.++.++.+++... ....++|++||...+...
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG--------- 152 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC---------
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC---------
Confidence 279999999997632 2345567789999999999999887532 114699999997765211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceE
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
..+...|+.+|...+.+++.++.++ |+++.+++||.|.++.... ....+..........++ .
T Consensus 153 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~ 219 (280)
T 3tox_A 153 ----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------K 219 (280)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------S
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------C
Confidence 1124569999999999999888774 8999999999999986421 01112222233322221 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
.+.+++|+|++++.++... -.|+++++.+|..++
T Consensus 220 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 256 (280)
T 3tox_A 220 RIARPEEIAEAALYLASDGASFVTGAALLADGGASVT 256 (280)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence 4778999999999998753 258899999986554
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=181.13 Aligned_cols=222 Identities=18% Similarity=0.184 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... .... ....++.++.+|++|++++.++++.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~--~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGE--AQAK-KLGNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHH--HHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHH--HHHH-HhCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 44689999999999999999999999 688888888642211 0000 0134689999999999999888742
Q ss_pred CCCCEEEEccccCCcC----------CcCCChHHHHHHHHHHHHHHHHHHHHc----------CCCceEEEEecccccCC
Q 005818 80 EKIDTIMHFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKIT----------GQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~~~v~~SS~~vyg~ 139 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... + ..+||++||...+..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~ 163 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEG 163 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCC
Confidence 2899999999986532 234456788999999999999988754 3 578999999877643
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCcee
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 216 (676)
.. +...|+.+|...+.+++.++.+ .|+++++++||.+.++.... ............ .+.
T Consensus 164 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~--~~~ 225 (265)
T 2o23_A 164 QV--------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS--LPEKVCNFLASQ--VPF 225 (265)
T ss_dssp CT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHT--CSS
T ss_pred CC--------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc--cCHHHHHHHHHc--CCC
Confidence 22 2456999999999999887766 38999999999998875421 111111111111 111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKE 256 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~ 256 (676)
. ..+++.+|+|++++.+++... .++.+++.+|..
T Consensus 226 ~------~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~ 260 (265)
T 2o23_A 226 P------SRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIR 260 (265)
T ss_dssp S------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred c------CCCCCHHHHHHHHHHHhhcCccCceEEEECCCEe
Confidence 0 147899999999999987543 677899988754
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-21 Score=185.94 Aligned_cols=223 Identities=15% Similarity=0.099 Sum_probs=136.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||++++++|+++ +++|++.+|.................++.++.+|++|++++.++++.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 68899888864221100000011235688999999999999888743
Q ss_pred CCCCEEEEccccCCc-------CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 EKIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++.+++ ++.+ ..+||++||...|..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------- 154 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWLY--------- 154 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccCC---------
Confidence 289999999998421 2344556788999999977766655 3334 578999999877621
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+++.++.++ |+++.+++||.++++..... ....+......+.+ ...
T Consensus 155 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~ 216 (253)
T 3qiv_A 155 --------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT-TPKEMVDDIVKGLP---------LSR 216 (253)
T ss_dssp -------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc-CcHHHHHHHhccCC---------CCC
Confidence 3359999999999999988875 79999999999998854211 11112222222211 124
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKER 257 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~ 257 (676)
+..++|++++++.++.... .++.|++.+|..+
T Consensus 217 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 217 MGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII 251 (253)
T ss_dssp ---CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred CCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence 5677999999999986532 5889999988654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-21 Score=195.45 Aligned_cols=200 Identities=13% Similarity=0.097 Sum_probs=149.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eecccc-CCChHHHHHHhhccCCCEEEECcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGR-LENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~D-l~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
+|+|+|||||||||++|++.|+++|++| .++.+| ++|++++.++++++ |+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~--d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcC--CEEEEcCC
Confidence 3689999999999999999999999765 244689 99999999999987 99999987
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-C-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-L-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
.. . ...|+.+ .+++++|++.+ + ++|++||..+-. . .+ .+.+.|+.+
T Consensus 83 ~~---~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~-------------~---~~-~~~~~y~~s 130 (352)
T 1xgk_A 83 SQ---A-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSL-------------Y---GP-WPAVPMWAP 130 (352)
T ss_dssp ST---T-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGG-------------T---SS-CCCCTTTHH
T ss_pred CC---C-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccc-------------c---CC-CCCccHHHH
Confidence 32 1 1346766 99999999998 7 566666654100 0 01 223679999
Q ss_pred HHHHHHHHHHccCeEEEEeeecccCCCCChHHH--HHHH------HhcCceec-c--CC---Cccch-hhHHHHHHHHHh
Q 005818 520 KAMVEELLKEYDNVCTLRVRMPISSDLNNPRNF--ITKI------SRYNKVVN-I--PN---SMTIL-DELLPISVEMAK 584 (676)
Q Consensus 520 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~--~~~~------~~~~~~~~-~--~~---~~~~v-~D~a~~~~~~~~ 584 (676)
|..+|++++.. +++++++||+ +||+... ...+ ..+..... . ++ +++|+ +|+|++++.+++
T Consensus 131 K~~~E~~~~~~----gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~ 205 (352)
T 1xgk_A 131 KFTVENYVRQL----GLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK 205 (352)
T ss_dssp HHHHHHHHHTS----SSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc----CCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHh
Confidence 99999999864 6888999964 6887521 0000 11221111 1 11 78999 899999999998
Q ss_pred cC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccch
Q 005818 585 RN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTL 623 (676)
Q Consensus 585 ~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 623 (676)
++ .+++||+++ +.+|+.|+++.+.+.+|.+..+.++|.
T Consensus 206 ~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp~ 247 (352)
T 1xgk_A 206 DGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK 247 (352)
T ss_dssp HCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred CCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECCH
Confidence 75 357999995 789999999999999998877666663
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=182.88 Aligned_cols=219 Identities=15% Similarity=0.130 Sum_probs=157.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcE-EEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH-HHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYK-IVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA-DLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~-v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++ |++.+|.......+.+.......++.++.+|++|+ +++.++++.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 56789999999999999999999999 564 77777764211111111111134688999999998 887776632
Q ss_pred --CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC------CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG------QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~------~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||... .+++...+++|+.++.++++++...- +..+||++||...+....
T Consensus 81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 146 (254)
T 1sby_A 81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH---------- 146 (254)
T ss_dssp HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------
T ss_pred hcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC----------
Confidence 37999999999753 46788999999999999999886421 025799999987764432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC-ChH--HHHHHHHHCCCCceeecCCCceEe
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLI--PKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.++.+ +|+++++++||.+.++..... ... ........... .
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------------~ 210 (254)
T 1sby_A 147 ----QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH------------P 210 (254)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTS------------C
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcC------------C
Confidence 2346999999999999987765 589999999999988642110 000 00001111111 2
Q ss_pred eeeHHHHHHHHHHHHhcCCCCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKGEVGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~ 255 (676)
+.+++|+|++++.+++....++.|++.+|.
T Consensus 211 ~~~~~dvA~~i~~~~~~~~~G~~~~v~gG~ 240 (254)
T 1sby_A 211 TQTSEQCGQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp CEEHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred CCCHHHHHHHHHHHHHcCCCCCEEEEeCCc
Confidence 348999999999999877778899998873
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=185.85 Aligned_cols=225 Identities=14% Similarity=0.108 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc-cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL-KNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|....... ..+ .....++.++.+|++|++++.++.+.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEI--ADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHH--HTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 44689999999999999999999999 6788888865321110 011 11245689999999999998776422
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~---------- 173 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR---------- 173 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS----------
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC----------
Confidence 3899999999987542 2445667899999999999998773 334 57999999987764332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|.++...................+. ..+..
T Consensus 174 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~ 240 (273)
T 3uf0_A 174 ----NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWAT 240 (273)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBC
T ss_pred ----CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCC
Confidence 2346999999999999998877 5899999999999987541100001112222222111 14678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
++|+|++++.++... -.|+.+++.+|...
T Consensus 241 pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 899999999998653 36889999988643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.8e-20 Score=180.37 Aligned_cols=231 Identities=12% Similarity=0.055 Sum_probs=167.0
Q ss_pred CCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGF--IASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|.-.+++++||||||+|+ ||+++++.|+++ +++|++.+|...... ...+.......++.++.+|++|++++++++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHH
Confidence 554567899999999988 999999999999 688888888642111 111111112237899999999999988877
Q ss_pred cc-----CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCC
Q 005818 78 LT-----EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~ 143 (676)
+. .++|+|||+|+.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-- 156 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP-- 156 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT--
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC--
Confidence 43 279999999998651 23444566788999999999999987642 125899999977654322
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
....|+.+|...+.+++.++.+. |+++.+++||.+..+...................+.
T Consensus 157 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------ 218 (266)
T 3oig_A 157 ------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------ 218 (266)
T ss_dssp ------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------
T ss_pred ------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------
Confidence 23469999999999999887764 899999999999987543222223333333322221
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+.+.+|+|++++.++... ..++.+++.+|-.
T Consensus 219 ---~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 219 ---RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ---CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 13678899999999998753 3678899988753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=184.36 Aligned_cols=224 Identities=16% Similarity=0.118 Sum_probs=160.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++++++||||||+|+||+++++.|+++ +++|++.+|...... ...+ .....++.++.+|++|++++.++++.
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGL--RAAGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 688998888642211 0111 11245789999999999998877743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH------cCCCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI------TGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~------~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++.. .+ ..+||++||...+.+..
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~----- 170 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM----- 170 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC-----
Confidence 2799999999986532 34445667889999999999988754 33 46999999977654332
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC---------CChHHHHHHHHHCCCCc
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---------EKLIPKFILLAMKGKPL 214 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~---------~~~~~~~~~~~~~~~~~ 214 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|.++.... ...............+.
T Consensus 171 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (279)
T 3sju_A 171 ---------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL 241 (279)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT
T ss_pred ---------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Confidence 2346999999999999988876 48999999999998763200 00112233333332221
Q ss_pred eeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 215 PIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 215 ~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+..++|+|++++.++... -.|+.+++.+|.
T Consensus 242 ---------~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 242 ---------GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp ---------SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred ---------CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 24778999999999988643 368899998874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=186.75 Aligned_cols=226 Identities=15% Similarity=0.091 Sum_probs=162.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.......... .......++.++++|++|++++.++++.
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6888888886431110000 0012245789999999999998887743
Q ss_pred -CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|++||+||..... .+.+++...+++|+.++.++++++...- +..+||++||...+.....
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 192 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET---------- 192 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----------
Confidence 2799999999976432 2455677899999999999999987642 2358999999877644332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+++.++.++ |+++.+++||.|+++.... .+-.........+ . ....+.++
T Consensus 193 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~--~-------p~~r~~~p 258 (291)
T 3ijr_A 193 ----LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS-SFDEKKVSQFGSN--V-------PMQRPGQP 258 (291)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH-HSCHHHHHHTTTT--S-------TTSSCBCG
T ss_pred ----ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc-cCCHHHHHHHHcc--C-------CCCCCcCH
Confidence 3469999999999999888765 8999999999999874210 0001111111111 1 12247788
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+|+|++++.++... ..++.+++.+|..
T Consensus 259 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 259 YELAPAYVYLASSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp GGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred HHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence 99999999998653 3678999988754
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=182.00 Aligned_cols=232 Identities=12% Similarity=-0.006 Sum_probs=163.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ... .....+++++.+|++|++++.++++.. ++|
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGE--AAA-RTMAGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHH-TTSSSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHH--HHH-HHhcCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 45689999999999999999999999 688999988643211 111 111457899999999999999998654 789
Q ss_pred EEEEccccCCc--CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005818 84 TIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 161 (676)
Q Consensus 84 ~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 161 (676)
+|||+||.... ..+.+++...+++|+.++.++++++.... .++||++||...+........ ...+..+..+...|+
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~-~~~~~~~~~~~~~Y~ 166 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLED-LNWRSRRYSPWLAYS 166 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSC-TTCSSSCCCHHHHHH
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCccc-ccccccCCCCcchHH
Confidence 99999998653 24566778999999999999999998765 579999999887754322111 112223344556799
Q ss_pred HHHHHHHHHHHHHHHHc---C--CCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHH
Q 005818 162 ATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 162 ~sK~~~E~~~~~~~~~~---~--l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
.+|...+.+++.+++++ | +++.+++||.|..+.... ....+...... .+ ..+-..+.+|+|+++
T Consensus 167 ~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~--~~~~~~~~~~~---~~------~~~~~~~~~~~A~~~ 235 (291)
T 3rd5_A 167 QSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA--SGRKLGDALMS---AA------TRVVATDADFGARQT 235 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc--cchHHHHHHHH---HH------HHHHhCCHHHHHHHH
Confidence 99999999998887764 4 999999999998775421 11111111110 00 111234589999999
Q ss_pred HHHHhcCC-CCceEEEcCC
Q 005818 237 DTILHKGE-VGHVYNIGTK 254 (676)
Q Consensus 237 ~~~~~~~~-~~~~y~i~~~ 254 (676)
+.++..+. .|+.+++.+|
T Consensus 236 ~~l~~~~~~~G~~~~vdgG 254 (291)
T 3rd5_A 236 LYAASQDLPGDSFVGPRFG 254 (291)
T ss_dssp HHHHHSCCCTTCEEEETTS
T ss_pred HHHHcCCCCCCceeCCccc
Confidence 99887654 4566777654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=183.44 Aligned_cols=232 Identities=16% Similarity=0.042 Sum_probs=159.8
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|..++++++||||||+|+||+++++.|+++ +++|++.+|...... ...+.......++.++.+|++|++++.++++
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR 78 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence 566667789999999999999999999999 688988888642211 0111111113468899999999999888774
Q ss_pred c-----CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHH----HHHHcC--CCceEEEEecccccCCCCCCcCCC
Q 005818 79 T-----EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE----ACKITG--QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~----a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
. .++|+|||+||... .+++...+++|+.++.++.+ .+++.+ +..+||++||...+.+..
T Consensus 79 ~~~~~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 148 (267)
T 2gdz_A 79 KVVDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------ 148 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------
T ss_pred HHHHHcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------
Confidence 3 37999999999753 46778899999987665554 444332 147899999987765432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHH-----HHcCCCEEEEeeCCccCCCCCCCChHHH------HHHHHHCCCCcee
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYG-----RSYGLPVITTRGNNVYGPNQFPEKLIPK------FILLAMKGKPLPI 216 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~ilR~~~i~G~~~~~~~~~~~------~~~~~~~~~~~~~ 216 (676)
+...|+.+|...+.+++.++ ...|+++++++||.+.++.......... +..... . +
T Consensus 149 --------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~--~- 215 (267)
T 2gdz_A 149 --------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK--D--M- 215 (267)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH--H--H-
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH--H--H-
Confidence 23469999999999988642 2358999999999998763210000000 000000 0 0
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC-CCCceEEEcCCCcccHHH
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG-EVGHVYNIGTKKERRVID 261 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~-~~~~~y~i~~~~~~s~~e 261 (676)
.....+++++|+|++++.++... ..+++|++.+++..++.|
T Consensus 216 ----~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 216 ----IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp ----HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred ----hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 01124789999999999998764 367899999888766554
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=177.97 Aligned_cols=216 Identities=17% Similarity=0.113 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... .....+.+|++|.+++.++++.
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 92 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGI-----------AADLHLPGDLREAAYADGLPGAVAAGL 92 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTS-----------CCSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH-----------HhhhccCcCCCCHHHHHHHHHHHHHhc
Confidence 34689999999999999999999999 68999988854211 1124457999999988777632
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++ ++.+ ..+||++||...+....
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 161 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP---------- 161 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC----------
Confidence 389999999998764 2344566788899999999999988 4444 57999999976653322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC-----CChHHHHHHHHHCCCCceeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|.++.... ...............+ .
T Consensus 162 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p---------~ 228 (266)
T 3uxy_A 162 ----GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP---------L 228 (266)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST---------T
T ss_pred ----CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC---------C
Confidence 24569999999999999888765 8999999999998864210 0011112222222222 2
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
..+.+++|+|++++.++... -.|+.+++.+|..+
T Consensus 229 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3uxy_A 229 GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265 (266)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence 25788999999999998753 25789999988654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=184.24 Aligned_cols=226 Identities=16% Similarity=0.134 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.++.......... .......++.++++|++|++++.++++.
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999 6888888764321100000 0011245789999999999998887743
Q ss_pred -CCCCEEEEccccCC--c----CCcCCChHHHHHHHHHHHHHHHHHHHHc----C--CCceEEEEecccccCCCCCCcCC
Q 005818 80 -EKIDTIMHFAAQTH--V----DNSFGNSFEFTKNNIYGTHVLLEACKIT----G--QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 -~~~d~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||... . +.+.+++...+++|+.++.++++++... + ...+||++||...+....
T Consensus 105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----- 179 (280)
T 4da9_A 105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP----- 179 (280)
T ss_dssp HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC-----
Confidence 28999999999832 1 2345567788899999999999887543 1 135899999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|..+... ............+ .. ..
T Consensus 180 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~-~~-------p~ 240 (280)
T 4da9_A 180 ---------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA--AVSGKYDGLIESG-LV-------PM 240 (280)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh--hcchhHHHHHhhc-CC-------Cc
Confidence 2346999999999999988877 4899999999999887542 1111111111110 11 12
Q ss_pred EeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 224 RSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
..+..++|+|++++.++.... .|+.+++.+|..
T Consensus 241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (280)
T 4da9_A 241 RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276 (280)
T ss_dssp -CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 247789999999999987543 588999988754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-21 Score=182.00 Aligned_cols=179 Identities=11% Similarity=0.084 Sum_probs=135.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
|+|+|||||||||++|+++|+++|++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~a~~~--- 78 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTR--- 78 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCT---
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCC--CEEEECccCC---
Confidence 689999999999999999999999765 45678999999999999987 9999999965
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
.. .+ ..++|+.++.+++++|++.++ ++|++||..+|+.....+ .+.+.|+.+|..+|+
T Consensus 79 ~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~--------------~~~~~y~~~K~~~e~ 137 (206)
T 1hdo_A 79 ND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP--------------PRLQAVTDDHIRMHK 137 (206)
T ss_dssp TC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC--------------GGGHHHHHHHHHHHH
T ss_pred CC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc--------------ccchhHHHHHHHHHH
Confidence 21 11 235899999999999999887 677788887775321111 145789999999999
Q ss_pred HHHHccCeEEEEeeecccCCCC-ChHHHHHHHHhcCceeccC-CCccchhhHHHHHHHHHhcCC--CceeEccCCC
Q 005818 526 LLKEYDNVCTLRVRMPISSDLN-NPRNFITKISRYNKVVNIP-NSMTILDELLPISVEMAKRNL--SGIWNFTNPG 597 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~-g~~~~~~~~~~~~~~~~~~-~~~~~v~D~a~~~~~~~~~~~--~g~yn~~~~~ 597 (676)
+++. .+++++++||+.++ ++.. ..+... ..... .++++++|+|++++.+++++. +++||++++.
T Consensus 138 ~~~~----~~i~~~~lrp~~~~~~~~~--~~~~~~--~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 138 VLRE----SGLKYVAVMPPHIGDQPLT--GAYTVT--LDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp HHHH----TCSEEEEECCSEEECCCCC--SCCEEE--SSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred HHHh----CCCCEEEEeCCcccCCCCC--cceEec--ccCCCCCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 9964 46899999999872 3210 000000 00112 489999999999999998863 4599999875
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-20 Score=182.05 Aligned_cols=221 Identities=18% Similarity=0.113 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.++...... +.+. ......++.++.+|++|+++++++++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAA-DEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688888777432111 0000 011245789999999999999888743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 173 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNP-------- 173 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC--------
Confidence 289999999998753 23445677899999999999998874 233 46999999976553322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
....|+.+|...+.+.+.++.+ +|+++.+++||.|.++... ... ........+. ..+
T Consensus 174 ------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~---~~~~~~~~p~---------~r~ 233 (269)
T 4dmm_A 174 ------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS--ELA---AEKLLEVIPL---------GRY 233 (269)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC--HHH---HHHHGGGCTT---------SSC
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc--ccc---HHHHHhcCCC---------CCC
Confidence 2346999999999998887775 4899999999999987652 111 1222222211 147
Q ss_pred eeHHHHHHHHHHHHhcC----CCCceEEEcCCCcc
Q 005818 227 LYCEDVAEAFDTILHKG----EVGHVYNIGTKKER 257 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~~ 257 (676)
.+.+|+|++++.++..+ -.|+++++.+|..+
T Consensus 234 ~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 234 GEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp BCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred CCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence 78899999999998763 25889999988644
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=192.67 Aligned_cols=202 Identities=17% Similarity=0.258 Sum_probs=150.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
|++|+||||||+||++|++.|+++|++| .++.+|+.|++++.++++++ |+|||+|+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~--d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKV--DVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCC--CEEEECCc
Confidence 3489999999999999999999999755 45678999999999999987 99999998
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-CCchhhh
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-GSFYSKT 519 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~~~Y~~s 519 (676)
.. ++.++.+++++|++.+ ++++++|+ |+.. .++..+..| .+.| .+
T Consensus 89 ~~------------------~~~~~~~l~~aa~~~g~v~~~v~S~---~g~~-----------~~~~~~~~p~~~~y-~s 135 (318)
T 2r6j_A 89 FP------------------QILDQFKILEAIKVAGNIKRFLPSD---FGVE-----------EDRINALPPFEALI-ER 135 (318)
T ss_dssp GG------------------GSTTHHHHHHHHHHHCCCCEEECSC---CSSC-----------TTTCCCCHHHHHHH-HH
T ss_pred hh------------------hhHHHHHHHHHHHhcCCCCEEEeec---cccC-----------cccccCCCCcchhH-HH
Confidence 43 1567899999999998 88777542 4321 111222233 3468 99
Q ss_pred HHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHH----hcCceeccCC-----CccchhhHHHHHHHHHhcCC--C
Q 005818 520 KAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS----RYNKVVNIPN-----SMTILDELLPISVEMAKRNL--S 588 (676)
Q Consensus 520 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~----~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~--~ 588 (676)
|..+|++++.. +++++++|++.+++. ++..+. ........++ ++++++|++++++.++.++. +
T Consensus 136 K~~~e~~~~~~----~~~~~~lr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~ 209 (318)
T 2r6j_A 136 KRMIRRAIEEA----NIPYTYVSANCFASY--FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALN 209 (318)
T ss_dssp HHHHHHHHHHT----TCCBEEEECCEEHHH--HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTT
T ss_pred HHHHHHHHHhc----CCCeEEEEcceehhh--hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccC
Confidence 99999999763 578888998665543 333222 2222222221 78999999999999998763 4
Q ss_pred ceeEccC-CCcccHHHHHHHHHhhcCCCCcccccchHhh
Q 005818 589 GIWNFTN-PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQ 626 (676)
Q Consensus 589 g~yn~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 626 (676)
++|++.+ ++.+|+.|+++.+.+.+|.++.+..++....
T Consensus 210 ~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 248 (318)
T 2r6j_A 210 RVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI 248 (318)
T ss_dssp EEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred eEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHH
Confidence 6788775 4889999999999999999887777765433
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=181.36 Aligned_cols=219 Identities=16% Similarity=0.197 Sum_probs=154.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
++++||||||+|+||+++++.|+++ +++|++.+|..... .+.+ ...++.++.+|++|++++.++++. .
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHAS-VTEL----RQAGAVALYGDFSCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHH-HHHH----HHHTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHH-HHHH----HhcCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4579999999999999999999999 67788888864321 0000 012478999999999998887743 3
Q ss_pred CCCEEEEccccCCcC---CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++|+|||+||..... .+.+++...+++|+.++.++.+++... .+..+||++||...+.+..
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------- 165 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS------------- 165 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS-------------
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-------------
Confidence 799999999976532 233445578999999999999887532 1257999999977664432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
+...|+.+|...+.+++.++.++ ++++.+++||.+..+...... .........+. ..+..++|+
T Consensus 166 -~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~----~~~~~~~~~p~---------~r~~~~edv 231 (260)
T 3gem_A 166 -KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA----YRANALAKSAL---------GIEPGAEVI 231 (260)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCS---------CCCCCTHHH
T ss_pred -CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH----HHHHHHhcCCC---------CCCCCHHHH
Confidence 23469999999999999988875 499999999999877542111 11111111111 135567999
Q ss_pred HHHHHHHHhcCC-CCceEEEcCCCccc
Q 005818 233 AEAFDTILHKGE-VGHVYNIGTKKERR 258 (676)
Q Consensus 233 a~ai~~~~~~~~-~~~~y~i~~~~~~s 258 (676)
|++++.+++... .|+.+++.+|..++
T Consensus 232 a~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 232 YQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred HHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 999999986543 67899999886543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=179.65 Aligned_cols=224 Identities=17% Similarity=0.113 Sum_probs=162.1
Q ss_pred CCCCC--CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVY--TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~--~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|+.+| ++|++|||||+|+||+++++.|+++ +++|++.+|...... .+. ......+..+++|++|+++++++++
T Consensus 1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~ 75 (248)
T 3op4_A 1 MSQFMNLEGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQ--AIS-DYLGDNGKGMALNVTNPESIEAVLK 75 (248)
T ss_dssp -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHH--HHH-HHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CccccCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHH-HHhcccceEEEEeCCCHHHHHHHHH
Confidence 55543 4689999999999999999999999 688988888642211 100 0112357889999999999988874
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|++||+||..... .+.+++...+++|+.++.++.+++.. .+ ..+||++||...+.+..
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---- 150 (248)
T 3op4_A 76 AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA---- 150 (248)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC----
Confidence 3 2899999999986532 34556778999999999999988753 33 47999999966553322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+.+.++.+ +|+++.+++||.+..+.... .............+
T Consensus 151 ----------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~p--------- 209 (248)
T 3op4_A 151 ----------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA--LNDEQRTATLAQVP--------- 209 (248)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT--SCHHHHHHHHHTCT---------
T ss_pred ----------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh--cCHHHHHHHHhcCC---------
Confidence 2456999999999999887775 38999999999998876532 11222222222221
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...+.+++|+|++++.++.... .|+.+++.+|.
T Consensus 210 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 210 AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 1247889999999999886432 57899998874
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=192.16 Aligned_cols=202 Identities=16% Similarity=0.276 Sum_probs=150.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee---------------------------eccccCCChHHHHHHhhccCCCE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE---------------------------YGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~---------------------------~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
+||+|+|||||||||++|++.|+++|++|. ++.+|+.|++++.++++++ |+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~--d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV--DI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC--CE
Confidence 357899999999999999999999997652 3457999999999999987 99
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-C
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-G 513 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~ 513 (676)
|||+|+.. . +.++.+++++|++.+ ++++++ | +|+.. .++..+..| .
T Consensus 81 vi~~a~~~---~---------------~~~~~~l~~aa~~~g~v~~~v~-S--~~g~~-----------~~~~~~~~p~~ 128 (321)
T 3c1o_A 81 VISALPFP---M---------------ISSQIHIINAIKAAGNIKRFLP-S--DFGCE-----------EDRIKPLPPFE 128 (321)
T ss_dssp EEECCCGG---G---------------SGGGHHHHHHHHHHCCCCEEEC-S--CCSSC-----------GGGCCCCHHHH
T ss_pred EEECCCcc---c---------------hhhHHHHHHHHHHhCCccEEec-c--ccccC-----------ccccccCCCcc
Confidence 99999843 1 677899999999998 877764 3 34321 122223333 4
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHH-------hcCceeccC--C---CccchhhHHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS-------RYNKVVNIP--N---SMTILDELLPISVE 581 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~-------~~~~~~~~~--~---~~~~v~D~a~~~~~ 581 (676)
+.| .+|..+|++++.. +++++++|++.++++ ++..+. ..+.....+ . ++++++|++++++.
T Consensus 129 ~~y-~sK~~~e~~~~~~----~~~~~~lrp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIEAA----ALPYTYVSANCFGAY--FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK 201 (321)
T ss_dssp HHH-HHHHHHHHHHHHH----TCCBEEEECCEEHHH--HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHHc----CCCeEEEEeceeccc--cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence 579 9999999999753 578889997776654 222222 122222222 1 78999999999999
Q ss_pred HHhcCC--CceeEccC-CCcccHHHHHHHHHhhcCCCCcccccchHh
Q 005818 582 MAKRNL--SGIWNFTN-PGVVSHNEILEMYKAYIDPGFKWTNFTLEE 625 (676)
Q Consensus 582 ~~~~~~--~g~yn~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 625 (676)
++..+. +++|++.+ ++.+|+.|+++.+.+.+|.+..+..++...
T Consensus 202 ~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~ 248 (321)
T 3c1o_A 202 VACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQ 248 (321)
T ss_dssp HHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHH
T ss_pred HHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHH
Confidence 998763 45788876 489999999999999999988777666543
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=181.20 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=158.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.|++++||||||+|+||+++++.|+++ +++|++++|...... ...+. ...+++++.+|++|++++.++++.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVG---TPDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC---CTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhh---ccCceEEEECCCCCHHHHHHHHHHHH
Confidence 366789999999999999999999999 688988888642111 01111 114789999999999998887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCC-ceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQI-KRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~-~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++.+++. +.+ . .+||++||...+.+..
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~------ 150 (251)
T 1zk4_A 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP------ 150 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC------
Confidence 3699999999976432 2334556789999998887776653 333 4 7999999987765432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHH-----HcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGR-----SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...|.+++.++. ..+++++++|||.++++...... ...... ......+
T Consensus 151 --------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~-~~~~~~~------- 212 (251)
T 1zk4_A 151 --------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP--GAEEAM-SQRTKTP------- 212 (251)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST--THHHHH-TSTTTCT-------
T ss_pred --------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC--chhhhH-HHhhcCC-------
Confidence 245699999999999987765 35899999999999987532111 011111 0111111
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+++.+|++++++.++... ..++.|++.+|..
T Consensus 213 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 124789999999999998653 2578899988753
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-19 Score=179.32 Aligned_cols=233 Identities=18% Similarity=0.102 Sum_probs=164.3
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--------------ccCCC--CCCCCCCeEEEE
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--------------LKNLN--PSRLSPNFKFIK 64 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--------------~~~~~--~~~~~~~v~~v~ 64 (676)
|...+++|+||||||+|+||+++++.|+++ +++|++.+|...... .+... ......++.+++
T Consensus 5 m~~~l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAE 82 (286)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCcccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEE
Confidence 344456789999999999999999999999 788888887631100 00000 011245789999
Q ss_pred ecCCCHHHHHHHHcc-----CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEE
Q 005818 65 GDVASADLVHFILLT-----EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIH 130 (676)
Q Consensus 65 ~Dl~d~~~~~~~~~~-----~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~ 130 (676)
+|++|++++.++++. .++|++||+||..... .+.+++...+++|+.++.++++++... ++..+||+
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 162 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL 162 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 999999999887743 3899999999986532 244567789999999999999887542 22358999
Q ss_pred EecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHH-----
Q 005818 131 VSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP----- 202 (676)
Q Consensus 131 ~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~----- 202 (676)
+||...+.... ....|+.+|...+.+.+.++.+ +|+++.+++||.|..+.........
T Consensus 163 isS~~~~~~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 228 (286)
T 3uve_A 163 TSSVGGLKAYP--------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPD 228 (286)
T ss_dssp ECCGGGTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTT
T ss_pred ECchhhccCCC--------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccc
Confidence 99977664332 2346999999999999988776 4899999999999988653111000
Q ss_pred -------HHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 203 -------KFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 203 -------~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+.........++ ..+.+.+|+|+++++++... -.|+.+++.+|..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~p--------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 229 LENPGPDDMAPICQMFHTLP--------IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp SSSCCHHHHHHHHHTTCSSS--------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccccchhhHHHHHHhhhccC--------CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 0111111111111 25789999999999998643 26889999888543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-20 Score=184.79 Aligned_cols=221 Identities=17% Similarity=0.162 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... ...+. ....++.++.+|++|++++.++++.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELR--EAGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 688998888642111 00010 1134688999999999998877742
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc------CCCceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT------GQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... + ..+||++||...+.+..
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------ 168 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV------ 168 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCT------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCC------
Confidence 2799999999976432 233456788999999999999987653 3 57999999976543221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH-----------HHHHHHHHCCCC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGKP 213 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~-----------~~~~~~~~~~~~ 213 (676)
+...|+.+|...+.+++.++.+. |+++++++||.+.++... ... ...........
T Consensus 169 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (277)
T 2rhc_B 169 --------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA--SVREHYSDIWEVSTEEAFDRITARV- 237 (277)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH--HHHHHHHHHHTCCHHHHHHHHHHHS-
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh--hhhhhcccccccchHHHHHHHHhcC-
Confidence 24569999999999999887763 799999999999876421 111 01111111111
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
....+++++|+|++++.++..+ ..++.|++.+|.
T Consensus 238 --------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 238 --------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp --------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 1124889999999999998653 257889998874
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=179.77 Aligned_cols=222 Identities=12% Similarity=0.108 Sum_probs=157.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+.. ..++.++.+|++|+++++++++.
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSA---YGDCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTT---SSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh---cCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999999 688999988642211 011111 12688899999999998887743
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCC---CceEEEEecccccCCCCCCcCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQ---IKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~---~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+. ..+||++||...+.....
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~----- 177 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE----- 177 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC-----
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC-----
Confidence 279999999997643 23445667899999999988887764 2331 279999999877644321
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 148 NHEASQLLPTN-PYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 148 ~~e~~~~~p~~-~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
.. .|+.+|...+.+++.++.+ .|+++.+++||.+..+... ................+.
T Consensus 178 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p~------- 239 (276)
T 2b4q_A 178 ---------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR--HIANDPQALEADSASIPM------- 239 (276)
T ss_dssp ---------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH--HHHHCHHHHHHHHHTSTT-------
T ss_pred ---------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh--hcchhHHHHHHhhcCCCC-------
Confidence 23 6999999999999988776 3899999999999887531 111111111111001111
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 240 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 14788999999999998653 357889998774
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=181.61 Aligned_cols=225 Identities=8% Similarity=0.009 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+.......++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 678998888642111 00000000022688999999999998877742
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+....
T Consensus 83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 152 (260)
T 2z1n_A 83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ--------- 152 (260)
T ss_dssp TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC---------
Confidence 259999999997543 22445667899999999977776654 334 57999999987765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC--------ChHHHH-HHHHHCCCCceeec
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--------KLIPKF-ILLAMKGKPLPIHG 218 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~--------~~~~~~-~~~~~~~~~~~~~~ 218 (676)
+...|+.+|...+.+.+.++.++ |+++++++||.++++..... ...... ....... .+
T Consensus 153 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p--- 222 (260)
T 2z1n_A 153 -----DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR--IP--- 222 (260)
T ss_dssp -----TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C--CT---
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc--CC---
Confidence 23469999999999998887764 89999999999998864210 000000 0111011 11
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 223 ----~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 223 ----MGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp ----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred ----CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 124779999999999998643 257889988763
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=177.10 Aligned_cols=221 Identities=15% Similarity=0.112 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|...... .+... ...++.++.+|++|++++.++++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGA--ATARE-LGDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHHT-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHH-hCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 688998888642111 11001 134688999999999998887742
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHH----HHHHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLE----ACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+ .+++.+ ..+||++||...+.+..
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA---------- 146 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence 279999999997653 23445667889999999985554 444544 57999999987764322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee-
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL- 227 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 227 (676)
+...|+.+|...+.+++.++.+ .|+++++++||.++++.. ..+ . ...............+.
T Consensus 147 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~~----~-~~~~~~~~~~~p~~~~~~ 211 (254)
T 1hdc_A 147 ----LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT------AET----G-IRQGEGNYPNTPMGRVGN 211 (254)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HHH----T-CCCSTTSCTTSTTSSCB-
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc------ccc----c-hhHHHHHHhcCCCCCCCC
Confidence 2456999999999999988776 389999999999988632 111 0 00000000000111367
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 8999999999998653 2578899988753
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-20 Score=187.98 Aligned_cols=228 Identities=13% Similarity=0.115 Sum_probs=159.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCC---CCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNL---NPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~---~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
.+++++||||||+|+||+++++.|+++ +++|++++|...... .+.+ .......++.++.+|++|++++.++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 355689999999999999999999999 678998888642110 0000 000124578999999999999988874
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|+|||+||..... .+.+++...+++|+.++.++++++.... ...+||++||...++ ..
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~----- 166 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-FP----- 166 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-CT-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC-CC-----
Confidence 3 2699999999965422 2334566789999999999999876521 136899999976222 11
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCC--CCCChHHHHHHHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
....|+.+|...+.+.+.++.+. |++++++|||.++|+.. ........+........ +
T Consensus 167 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------p- 229 (303)
T 1yxm_A 167 ---------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI-------P- 229 (303)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS-------T-
T ss_pred ---------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC-------c-
Confidence 23469999999999999888764 89999999999999842 11110011111111111 0
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
...+.+++|+|++++.++... ..++.+++.+|...
T Consensus 230 -~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~ 267 (303)
T 1yxm_A 230 -AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL 267 (303)
T ss_dssp -TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence 114788999999999998643 35788999988643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=178.43 Aligned_cols=210 Identities=16% Similarity=0.066 Sum_probs=151.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.... .+.+ ...++.++.+|++|.+++.++++.
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVER--LKAL----NLPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHH--HHTT----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHh----hcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 45689999999999999999999999 6788888886421 1111 123789999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.|+.++.+++. +.+ ..+||++||...+....
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~---------- 154 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP---------- 154 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC----------
Confidence 2799999999986532 2344566789999999999777664 334 57999999987764332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+.+.++.+ +|+++.+++||.|.++....... .......... ..++ ..+++
T Consensus 155 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~-~~~~-------~r~~~ 221 (266)
T 3p19_A 155 ----DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAW-RVDM-------GGVLA 221 (266)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHH-HHHT-------TCCBC
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-hhhhHHHHhh-cccc-------cCCCC
Confidence 2346999999999999988776 48999999999999875421111 0111111000 0111 13788
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 005818 229 CEDVAEAFDTILHKGEVG 246 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~~~ 246 (676)
++|+|++++.+++++...
T Consensus 222 pedvA~av~~l~~~~~~~ 239 (266)
T 3p19_A 222 ADDVARAVLFAYQQPQNV 239 (266)
T ss_dssp HHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 999999999999877543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-19 Score=172.72 Aligned_cols=213 Identities=15% Similarity=0.118 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.... .+.+..+++|++|+++++++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~-----------~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEP-----------PEGFLAVKCDITDTEQVEQAYKEIEETH 85 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCC-----------CTTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHh-----------hccceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 6888888885321 12378899999999998877743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 154 (253)
T 2nm0_A 86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSA---------- 154 (253)
T ss_dssp CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHH----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC----------
Confidence 368999999998643 235677889999999999999987653 23 57999999976543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.+..+... .+............+ ...+++
T Consensus 155 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~p---------~~~~~~ 219 (253)
T 2nm0_A 155 ----GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK--VLTDEQRANIVSQVP---------LGRYAR 219 (253)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCT---------TCSCBC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh--hcCHHHHHHHHhcCC---------CCCCcC
Confidence 12469999999999999887763 799999999999876432 111111111222111 114789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+|+|++++.++..+ ..++.+.+.+|..
T Consensus 220 p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 220 PEEIAATVRFLASDDASYITGAVIPVDGGLG 250 (253)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence 999999999998653 2578898887753
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-20 Score=182.07 Aligned_cols=237 Identities=15% Similarity=0.052 Sum_probs=163.4
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-----------ccCCC--CCCCCCCeEEEEecC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-----------LKNLN--PSRLSPNFKFIKGDV 67 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----------~~~~~--~~~~~~~v~~v~~Dl 67 (676)
|...+++++||||||+|+||+++++.|+++ +++|++.+|...... .+... ......++..+.+|+
T Consensus 5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 82 (277)
T 3tsc_A 5 MAGKLEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT 82 (277)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred cccccCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 334456789999999999999999999999 688888887432110 00000 011245789999999
Q ss_pred CCHHHHHHHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecc
Q 005818 68 ASADLVHFILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTD 134 (676)
Q Consensus 68 ~d~~~~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~ 134 (676)
+|++++.++++. .++|++||+||.... +.+.+++...+++|+.++.++++++.. .+.-.+||++||.
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~ 162 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA 162 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence 999999888743 479999999998754 234556778999999999999987543 2223589999997
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCC
Q 005818 135 EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKG 211 (676)
Q Consensus 135 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 211 (676)
..+..... ...|+.+|...+.+++.++.++ |+++.+++||.+..+.... .............
T Consensus 163 ~~~~~~~~--------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~ 227 (277)
T 3tsc_A 163 AGMKMQPF--------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG-DMVTAVGQAMETN 227 (277)
T ss_dssp GGTSCCSS--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH-HHHHHHHHHHHTC
T ss_pred hhCCCCCC--------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc-hhhhhhhhccccc
Confidence 76644322 3469999999999999888764 8999999999998875421 1111111111111
Q ss_pred CCc-eeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 212 KPL-PIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 212 ~~~-~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
... ......... .+.+.+|+|++++.++... -.|+.+++.+|.
T Consensus 228 ~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 228 PQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp GGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 100 000111111 3789999999999998643 257889998874
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-20 Score=181.93 Aligned_cols=231 Identities=13% Similarity=0.076 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCC--CC-CCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPS--RL-SPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~-~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... .+.+... .. ..++.++.+|++|++++.++++.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 78 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAE-IEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHH-HHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchH-HHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999 68899888864320 1100000 00 34688999999999998887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 150 (260)
T 1x1t_A 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA------- 150 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC-------
Confidence 3799999999976532 24456678899999999999888743 33 57999999987664322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHH-HC-CCCceee-cCCCc
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLA-MK-GKPLPIH-GDGSN 222 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~ 222 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.+.++.... ......... .. ....... .....
T Consensus 151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p 221 (260)
T 1x1t_A 151 -------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK--QISALAEKNGVDQETAARELLSEKQP 221 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCT
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH--hhhhhccccCCchHHHHHHHhhccCC
Confidence 24569999999999999887764 8999999999999875421 111000000 00 0000000 00001
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+.+|+|++++.++... ..++.|++.+|.
T Consensus 222 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 125789999999999998643 257889998874
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=181.07 Aligned_cols=232 Identities=16% Similarity=0.111 Sum_probs=164.4
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc----------cCCC--CCCCCCCeEEEEecCC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL----------KNLN--PSRLSPNFKFIKGDVA 68 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~----------~~~~--~~~~~~~v~~v~~Dl~ 68 (676)
|...++++++|||||+|+||+++++.|+++ +++|++++|....... .... ......++.++++|++
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR 99 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC
Confidence 344456789999999999999999999999 7888888876321100 0000 0112457899999999
Q ss_pred CHHHHHHHHcc-----CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecc
Q 005818 69 SADLVHFILLT-----EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTD 134 (676)
Q Consensus 69 d~~~~~~~~~~-----~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~ 134 (676)
|++++.++++. .++|++||+||..... .+.+++...+++|+.++.++.+++... ++..+||++||.
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~ 179 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI 179 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence 99998887743 3799999999986532 244566789999999999999887542 224699999997
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC------------
Q 005818 135 EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK------------ 199 (676)
Q Consensus 135 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~------------ 199 (676)
..+.... ....|+.+|...+.+++.++.++ |+++.+++||.|..+......
T Consensus 180 ~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 245 (299)
T 3t7c_A 180 GGLRGAE--------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP 245 (299)
T ss_dssp GGTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSC
T ss_pred hhccCCC--------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccc
Confidence 7664332 23469999999999999888765 899999999999988652110
Q ss_pred hHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 200 LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..............++ ..+...+|+|++++.++... -.|+.+++.+|..
T Consensus 246 ~~~~~~~~~~~~~~~p--------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~ 297 (299)
T 3t7c_A 246 TVEDFQVASRQMHVLP--------IPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297 (299)
T ss_dssp CHHHHHHHHHHHSSSS--------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hhhHHHHHhhhhcccC--------cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence 0001000000001110 24778999999999998653 2588999988854
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-20 Score=183.32 Aligned_cols=223 Identities=13% Similarity=0.063 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||++++++|+++ +++|++++|...... .+.. .....++.++.+|++|++++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADE--KAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHH--HHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688988888642210 0000 00134688999999999998887743
Q ss_pred --CCCCEEEEccccCCc------CCcCCChHHHHHHHHHH----HHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYG----THVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||.... ..+.+++...+++|+.+ ++++++.+++.+ ..+||++||...+...
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------- 179 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN------- 179 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC--------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC-------
Confidence 369999999997654 33344556788999999 556667776655 6899999997654331
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...+...|+.+|...|.+++.++.++ + ++.+++||.+.++...... ...........+ ..
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p---------~~ 242 (279)
T 3ctm_A 180 -----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS--KDMKAKWWQLTP---------LG 242 (279)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC--HHHHHHHHHHST---------TC
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC--hHHHHHHHHhCC---------cc
Confidence 01234579999999999999988774 6 8999999999887542111 122222211111 11
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+++++|+|++++.++... ..++.+++.+|..
T Consensus 243 ~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 243 REGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp SCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 4788999999999998653 3578899988753
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.2e-20 Score=180.23 Aligned_cols=222 Identities=18% Similarity=0.083 Sum_probs=158.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
.+++++||||||+|+||+++++.|+++ +++|++..+.......... .......++.++.+|++|++++.++++.
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 355689999999999999999999999 6777665443211100000 0011245789999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH-----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK-----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 172 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNR------- 172 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCT-------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCC-------
Confidence 2899999999987532 3445677899999999999998873 223 57999999966553322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+.+.++.++ |+++.+++||.+.++..... ...........+. ..
T Consensus 173 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~---------~~ 233 (267)
T 4iiu_A 173 -------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPM---------KR 233 (267)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTT---------CS
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCC---------CC
Confidence 23569999998888888777664 89999999999998865322 2333333333221 13
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
+.+++|+|++++.++... ..|+++++.+|
T Consensus 234 ~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 234 MGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 678999999999998643 36788999876
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-20 Score=186.59 Aligned_cols=224 Identities=12% Similarity=0.135 Sum_probs=162.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+ .....++.++.+|++|++++.++++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEF--RNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHH--HHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999 688999888642211 0001 11245789999999999999888743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++... + ..+||++||...+....
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~-------- 170 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARA-------- 170 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT--------
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCC--------
Confidence 2799999999986532 345567788999999999998776542 3 46999999976543322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH--HHHHHHHHCCCCceeecCCCceE
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI--PKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|.++... .+. +.+........+. .
T Consensus 171 ------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p~---------~ 233 (271)
T 4ibo_A 171 ------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ--ALIDNPEFDAWVKARTPA---------K 233 (271)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--HHHHCHHHHHHHHHHSTT---------C
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh--hcccCHHHHHHHHhcCCC---------C
Confidence 2456999999999999988776 4899999999999887531 111 1222222222221 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
.+..++|+|++++.++... -.|+.+++.+|...+
T Consensus 234 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 234 RWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 3667899999999988643 268899999886543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-20 Score=187.78 Aligned_cols=228 Identities=11% Similarity=0.081 Sum_probs=162.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.++.......+.+. ......++.++.+|++|+++++++++.
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 68888887753211111110 011245789999999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+.....
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------- 195 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--------- 195 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT---------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC---------
Confidence 389999999997542 23455677899999999999999987653 1248999999887754332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.++ |+++.+++||.|.++............... ........+..
T Consensus 196 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~p~~r~~~ 261 (294)
T 3r3s_A 196 -----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF---------GQQTPMKRAGQ 261 (294)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTT---------TTTSTTSSCBC
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHH---------HhcCCCCCCcC
Confidence 3469999999999999888765 899999999999986411000000000000 11111224678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+|+|++++.++... -.++++++.+|..+
T Consensus 262 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 262 PAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 899999999988643 25889999988654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.4e-20 Score=181.27 Aligned_cols=224 Identities=15% Similarity=0.025 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|++++||||||+ |+||+++++.|+++ +++|++.+|..... ..+.+... ..++.++.+|++|++++.++++.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK 79 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEcCCCCHHHHHHHHHHHH
Confidence 567899999999 99999999999999 68898888864210 11111000 12378899999999998887743
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+.+..
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 153 (275)
T 2pd4_A 80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA------ 153 (275)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC------
Confidence 278999999998653 33445667899999999999999987641 015899999976543221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|.++..........+........++ .
T Consensus 154 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 216 (275)
T 2pd4_A 154 --------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------R 216 (275)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------C
Confidence 23469999999999999887765 899999999999987542211122222222221111 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+.+.+|+|++++.++... ..++.+++.++.
T Consensus 217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 3567899999999998642 257788888774
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=179.38 Aligned_cols=222 Identities=16% Similarity=0.110 Sum_probs=156.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++.+|..... .+.+.. .....++.++++|++|++++.++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQK-ANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 68888888732111 000000 01134688999999999999887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++. +.+ ..+||++||...+.+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 149 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP-------- 149 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC--------
Confidence 2799999999986532 3445567889999999887776654 334 57999999976543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+.+.++.+ +|+++++++||.+.++...... ...........+. ..+
T Consensus 150 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~---------~~~ 212 (246)
T 2uvd_A 150 ------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPA---------AQF 212 (246)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTT---------CSC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCC---------CCC
Confidence 1346999999999998877665 4899999999999887542111 1111111111111 147
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+.+|+|++++.++... ..++.+++.+|.
T Consensus 213 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 213 GEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 89999999999998643 257889998774
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-20 Score=180.17 Aligned_cols=227 Identities=15% Similarity=0.135 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+.......++.++.+|++|++++.++++.
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 55689999999999999999999999 688988888642111 00000000134688999999999998887743
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++ ++.+ ..+||++||...+....
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 160 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG------- 160 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS-------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCC-------
Confidence 279999999997643 2234556788999999988766554 3444 57999999977654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC------CCChHHHHHHHHHCCCCceeecC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF------PEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
+...|+.+|...+.+.+.++.+ +|+++.+++||.+.++... ................+
T Consensus 161 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------ 227 (267)
T 1iy8_A 161 -------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------ 227 (267)
T ss_dssp -------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC------
Confidence 2346999999999999887765 4899999999999876321 01111111112222111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
...+.+.+|+|++++.++..+ ..++.+++.+|...
T Consensus 228 ---~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 265 (267)
T 1iy8_A 228 ---SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA 265 (267)
T ss_dssp ---TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred ---CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 124789999999999998653 36788999887543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=178.39 Aligned_cols=222 Identities=15% Similarity=0.084 Sum_probs=158.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+|+||||||+|+||+++++.|+++ +++|++.+|.......+... ......++.++.+|++|++++.++++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999 67888888864320011100 001135689999999999998887742
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCC-ceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQI-KRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~-~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... + . .+||++||...+.+..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------- 149 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFP--------- 149 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCT---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCC---------
Confidence 2799999999986532 244566788999999999999887652 4 4 7999999977654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH-----------HHHHHHHHCCCCcee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMKGKPLPI 216 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~-----------~~~~~~~~~~~~~~~ 216 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.+..+... ... ...........+
T Consensus 150 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p--- 219 (258)
T 3a28_C 150 -----ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE--QIDAELSKINGKPIGENFKEYSSSIA--- 219 (258)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH--HHHHHHHHHHCCCTTHHHHHHHTTCT---
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh--hhhhhhccccCCchHHHHHHHHhcCC---
Confidence 23469999999999999887653 899999999999765321 000 011111111111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+.+.+|+|++++.++... ..++.+++.+|..
T Consensus 220 ------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 256 (258)
T 3a28_C 220 ------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML 256 (258)
T ss_dssp ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred ------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence 113789999999999998653 3678899988754
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-20 Score=179.48 Aligned_cols=223 Identities=16% Similarity=0.153 Sum_probs=159.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|+|+||||||+|+||+++++.|+++|.++.|++.+|..... +.+.. ....++.++.+|++|+++++++++. .
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~--~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPL--KKLKE-KYGDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHH--HHHHH-HHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHH--HHHHH-HhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35899999999999999999999998789999988864211 11100 1134689999999999999888743 2
Q ss_pred CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|++||+||.... +.+.+++...+++|+.++.++.+++ ++.+ .++|++||...+....
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~---------- 145 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS---------- 145 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC----------
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC----------
Confidence 89999999998543 2344566789999999999999888 4434 6999999976654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCCccCCCCCCC-------ChHHHHHHHHHCCCCceeecCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+.+.++.+. ++++.+++||.+..+..... ..............+ .
T Consensus 146 ----~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 212 (254)
T 3kzv_A 146 ----SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------N 212 (254)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------T
T ss_pred ----CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------c
Confidence 24569999999999999988775 89999999999998754211 011222222221111 1
Q ss_pred EeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCCc
Q 005818 224 RSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKKE 256 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~ 256 (676)
..+.+.+|+|++++.++... ..|+.+++.+++.
T Consensus 213 ~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 213 NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL 249 (254)
T ss_dssp C----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred CCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence 14677899999999988755 2577888877653
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=179.86 Aligned_cols=226 Identities=14% Similarity=0.077 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .... ....++..+++|++|+++++++++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~--~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAV--RVAN-EIGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHH--HHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 678998888642111 1000 1245789999999999998888743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++... .+..+||++||...+.+..
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 168 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA----------- 168 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC-----------
Confidence 2899999999976532 344556678899999999999887431 1246999999987764332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC----CCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF----PEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.+..+... ................+ ...
T Consensus 169 ---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r 236 (277)
T 4dqx_A 169 ---DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV---------MDR 236 (277)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST---------TCS
T ss_pred ---CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc---------ccC
Confidence 23569999999999999887764 899999999999876310 00011111111222221 124
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
+.+++|+|++++.++... ..|+.+++.+|...+
T Consensus 237 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 237 MGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred CcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 778999999999998653 268899999886543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=179.42 Aligned_cols=230 Identities=17% Similarity=0.046 Sum_probs=160.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
+++||||||+|+||+++++.|+++ +++|++.+|.................++.++++|++|++++.++++. .+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999 68898888864221100000112245789999999999998888743 28
Q ss_pred CCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 82 IDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 82 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
+|++||+||.... +.+.+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~----------- 173 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT----------- 173 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-----------
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC-----------
Confidence 9999999997542 3344566789999999999999988 4444 57999999976543211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce--Eeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV--RSYL 227 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v 227 (676)
..+...|+.+|...+.+++.++.+ +|+++.+++||.|..+........... .. ............. ..+.
T Consensus 174 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~--~~~~~~~~~~~p~~~~r~~ 248 (283)
T 3v8b_A 174 -TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE--ET--AIPVEWPKGQVPITDGQPG 248 (283)
T ss_dssp -STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH--HH--SCCCBCTTCSCGGGTTCCB
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch--hh--hhhhhhhhhcCccccCCCC
Confidence 112457999999999999998887 479999999999988765321110010 00 0001000000001 2467
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+|+|++++.++... -.|+.+++.+|.
T Consensus 249 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 249 RSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 8899999999998643 257889998774
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.82 E-value=6e-20 Score=181.69 Aligned_cols=227 Identities=14% Similarity=0.088 Sum_probs=159.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++++++||||||+|+||+++++.|+++ +++|++.++.......... .......++.++.+|++|+++++++++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA 99 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999 6888888754321110000 0011245789999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..+||++||...+....
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 170 (269)
T 3gk3_A 100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF-------- 170 (269)
T ss_dssp HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC--------
Confidence 2899999999986532 24456678899999999999988753 33 47999999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.+..+... ........ .... .......+
T Consensus 171 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~----~~~~----~~~~~~~~ 234 (269)
T 3gk3_A 171 ------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE--AVPQDVLE----AKIL----PQIPVGRL 234 (269)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT--C-----------CCSG----GGCTTSSC
T ss_pred ------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhh--hhchhHHH----HHhh----hcCCcCCc
Confidence 23469999999999998877764 899999999999887652 11111111 0000 01112246
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTKKER 257 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~ 257 (676)
.+.+|+|++++.++.... .|+.+++.+|..+
T Consensus 235 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~ 268 (269)
T 3gk3_A 235 GRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM 268 (269)
T ss_dssp BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred cCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence 789999999999987542 5789999988654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-20 Score=187.28 Aligned_cols=203 Identities=18% Similarity=0.208 Sum_probs=150.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee----------------------------eccccCCChHHHHHHhhccCCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE----------------------------YGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~----------------------------~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
||+|+|||||||||++|++.|+++|++|. ++.+|+.|++++.++++++ |+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQV--DI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCC--CE
Confidence 56899999999999999999999997652 3557999999999999987 99
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-C
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-G 513 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~ 513 (676)
|||+|+.. . +.++.+++++|++.| ++++++| +|+.. .++..+..| .
T Consensus 80 vi~~a~~~---~---------------~~~~~~l~~aa~~~g~v~~~v~S---~~g~~-----------~~~~~~~~p~~ 127 (307)
T 2gas_A 80 VICAAGRL---L---------------IEDQVKIIKAIKEAGNVKKFFPS---EFGLD-----------VDRHDAVEPVR 127 (307)
T ss_dssp EEECSSSS---C---------------GGGHHHHHHHHHHHCCCSEEECS---CCSSC-----------TTSCCCCTTHH
T ss_pred EEECCccc---c---------------cccHHHHHHHHHhcCCceEEeec---ccccC-----------cccccCCCcch
Confidence 99999844 1 567889999999998 8777643 34321 111223333 3
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--HHHHH---HHhcCceeccC-----CCccchhhHHHHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITK---ISRYNKVVNIP-----NSMTILDELLPISVEMA 583 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~---~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~ 583 (676)
+.| .+|..+|++++.. +++++++|++.++++. .+... ....+.....+ .++++++|++++++.++
T Consensus 128 ~~y-~sK~~~e~~~~~~----~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 128 QVF-EEKASIRRVIEAE----GVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp HHH-HHHHHHHHHHHHH----TCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHHc----CCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 579 9999999999753 5888999988777642 11111 01111221121 17899999999999999
Q ss_pred hcCC--CceeEccCC-CcccHHHHHHHHHhhcCCCCcccccchHh
Q 005818 584 KRNL--SGIWNFTNP-GVVSHNEILEMYKAYIDPGFKWTNFTLEE 625 (676)
Q Consensus 584 ~~~~--~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 625 (676)
..+. +++|++.++ +.+|+.|+++.+.+.+|.+..+..++...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (307)
T 2gas_A 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQ 247 (307)
T ss_dssp TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 8763 457887764 78999999999999999988777776544
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-20 Score=190.25 Aligned_cols=204 Identities=17% Similarity=0.247 Sum_probs=150.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhccCCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
||+|+|||||||||++|++.|+++|++| .++.+|+.|++++.++++++ |+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC--CEE
Confidence 5689999999999999999999999765 23568999999999999987 999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC-CC
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT-GS 514 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p-~~ 514 (676)
||+|+.. ++.++.+++++|++.+ ++++++|+ |+.. .++..+..| .+
T Consensus 82 i~~a~~~------------------~~~~~~~l~~aa~~~g~v~~~v~S~---~g~~-----------~~~~~~~~p~~~ 129 (308)
T 1qyc_A 82 ISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPSE---FGND-----------VDNVHAVEPAKS 129 (308)
T ss_dssp EECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECSC---CSSC-----------TTSCCCCTTHHH
T ss_pred EECCcch------------------hhhhHHHHHHHHHhcCCCceEeecc---cccC-----------ccccccCCcchh
Confidence 9999843 1567899999999998 88777543 4321 111223334 35
Q ss_pred chhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--HHHHH---HHhcCceeccCC-----CccchhhHHHHHHHHHh
Q 005818 515 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITK---ISRYNKVVNIPN-----SMTILDELLPISVEMAK 584 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~---~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~ 584 (676)
.| .+|..+|++++.. +++++++|++.++++. .+... ....+.....++ ++++++|++++++.+++
T Consensus 130 ~y-~sK~~~e~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEAE----GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HH-HHHHHHHHHHHHH----TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HH-HHHHHHHHHHHhc----CCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 68 9999999999753 5788888987766532 11110 011112221211 78999999999999998
Q ss_pred cCC--CceeEccCC-CcccHHHHHHHHHhhcCCCCcccccchHhh
Q 005818 585 RNL--SGIWNFTNP-GVVSHNEILEMYKAYIDPGFKWTNFTLEEQ 626 (676)
Q Consensus 585 ~~~--~g~yn~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 626 (676)
++. +++|++.++ +.+|+.|+++.+.+.+|.+..+..++.+..
T Consensus 205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 249 (308)
T 1qyc_A 205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEV 249 (308)
T ss_dssp CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHH
T ss_pred CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHHHH
Confidence 763 468888764 789999999999999999887777775443
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-20 Score=179.14 Aligned_cols=228 Identities=14% Similarity=0.142 Sum_probs=165.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... +.+.. ....++.++.+|++|++++.++++.
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNI--ARIRE-EFGPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHH-HHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH-HhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 68899998864211 11100 1134689999999999998877643
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|++||+||..... .+.+++...+++|+.++.++.+++...- +-.++|++||...+....
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 147 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP------------- 147 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-------------
Confidence 3799999999987532 2455677889999999999999987531 125899999987665433
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCCh----HHHHHHHHHCCCCceeecCCCceEeee
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL----IPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...+.+.+.++.++ |+++.+++||.+..+....... ...+........+. ..+.
T Consensus 148 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~ 217 (255)
T 4eso_A 148 -GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNG 217 (255)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCB
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCc
Confidence 23469999999999999888774 8999999999999886432111 11222222211111 1367
Q ss_pred eHHHHHHHHHHHHhcC--CCCceEEEcCCCcccHH
Q 005818 228 YCEDVAEAFDTILHKG--EVGHVYNIGTKKERRVI 260 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~--~~~~~y~i~~~~~~s~~ 260 (676)
+.+|+|++++.++... ..|+.+++.+|...++.
T Consensus 218 ~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 218 TADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp CHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred CHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence 8899999999888642 25789999998765543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=174.27 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=139.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee-------ccccCCChHHHHHHhhcc-CCCEEEECccccCCCC-cchhccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY-------GKGRLENRSQLLADIQNV-KPTHVFNAAGVTGRPN-VDWCETH 454 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~-------~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~-~~~~~~~ 454 (676)
+|+|+||||+|+||++++++|+ +|++|.. +.+|++|+++++++++.. ++|+|||+||...... .....++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 81 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEK 81 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 3689999999999999999999 9998843 578999999999998874 4699999999652111 1112234
Q ss_pred hhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc
Q 005818 455 KPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD 531 (676)
Q Consensus 455 ~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~ 531 (676)
....+++|+.++.++++++.+. +.++|++||...+. +..+...|+.+|...|.+++.+.
T Consensus 82 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 82 NAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED------------------PIVQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp HHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS------------------CCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC------------------CCCccHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999876 55778887765431 22344789999999999999876
Q ss_pred Ce--EEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCc-eeEc
Q 005818 532 NV--CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSG-IWNF 593 (676)
Q Consensus 532 ~~--~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g-~yn~ 593 (676)
.. .++++..+||+.++++.... ... .....+++++|+|++++.++.....| +||+
T Consensus 144 ~e~~~gi~v~~v~pg~v~~~~~~~---~~~----~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 144 IEMPRGIRINTVSPNVLEESWDKL---EPF----FEGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp TSCSTTCEEEEEEECCBGGGHHHH---GGG----STTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHccCCeEEEEEecCccCCchhhh---hhh----ccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 54 38999999999999885321 111 12347899999999999888655444 7876
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-20 Score=182.78 Aligned_cols=226 Identities=15% Similarity=0.090 Sum_probs=161.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|....... ..+. .....++.++++|++|+++++++++.
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALG-EQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 6889998886422110 0000 00245789999999999998877743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||..... .+.+++...+++|+.++.++.+++... +...++|++||...+....
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 166 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP-------- 166 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC--------
Confidence 2899999999987532 344456788999999999999887532 2135999999987764332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|..+...................+. ..+
T Consensus 167 ------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~ 231 (266)
T 4egf_A 167 ------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRF 231 (266)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSC
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCC
Confidence 2356999999999999988876 3899999999999876321000001122223332221 146
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
...+|+|++++.++... -.++++++.+|..
T Consensus 232 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~ 264 (266)
T 4egf_A 232 AVPHEVSDAVVWLASDAASMINGVDIPVDGGYT 264 (266)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence 78999999999998643 2678999988754
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.8e-20 Score=181.89 Aligned_cols=211 Identities=13% Similarity=0.100 Sum_probs=158.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 34689999999999999999999999754 45678999999999888743 579
Q ss_pred EEEECccccCC---CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 435 HVFNAAGVTGR---PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 435 ~Vih~a~~~~~---~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|||+||.... +......++....+++|+.++.++++++... + .++|++||..++...
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 160 (278)
T 2bgk_A 95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------------- 160 (278)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--------------
T ss_pred EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC--------------
Confidence 99999996521 1112223455678999999999999998763 3 478888887766311
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH---------HHHHHHHhcCceeccCCCccchhh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR---------NFITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
..+...|+.||...|.+++.+.. ..++++.++||+.++++. .+...+....+ .....+++++|
T Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d 235 (278)
T 2bgk_A 161 ---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA--NLKGTLLRAED 235 (278)
T ss_dssp ---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC--SSCSCCCCHHH
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc--ccccccCCHHH
Confidence 11346799999999999988643 358999999999999873 11222221111 11236889999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCCcccHHHHHHHHHhhc
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPGVVSHNEILEMYKAYI 612 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~~~s~~e~~~~i~~~~ 612 (676)
+|++++.++..+ . +.+|++.++..+++.|+++.+.+.+
T Consensus 236 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 236 VADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 999999998653 2 3499999999999999999987654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=177.59 Aligned_cols=222 Identities=16% Similarity=0.121 Sum_probs=159.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----C
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----E 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~ 80 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... .+ ....++.++++|++|++++.++++. .
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~-----~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDV-VA-----DLGDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHHH-HH-----HTCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHHH-HH-----hcCCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 44689999999999999999999999 68888888843211 11 1245789999999999998887742 2
Q ss_pred CCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc-----------CCCceEEEEecccccCCCC
Q 005818 81 KIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT-----------GQIKRFIHVSTDEVYGETD 141 (676)
Q Consensus 81 ~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----------~~~~~~v~~SS~~vyg~~~ 141 (676)
++|++||+||.... ..+.+++...+++|+.++.++++++... ..-.++|++||...+....
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI 158 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence 89999999997542 1445667789999999999999988653 1135899999977653322
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeec
Q 005818 142 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 142 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|..+... .+............+. .
T Consensus 159 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~--~- 219 (257)
T 3tl3_A 159 --------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA--SLPEEARASLGKQVPH--P- 219 (257)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSS--S-
T ss_pred --------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh--hccHHHHHHHHhcCCC--C-
Confidence 1346999999999999887776 4899999999999887652 1222222222222211 0
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKERR 258 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s 258 (676)
..+.+.+|+|++++.+++.+. .|+.+++.+|..++
T Consensus 220 -----~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 220 -----SRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp -----CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred -----CCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 147889999999999997643 67889998886443
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=181.06 Aligned_cols=220 Identities=16% Similarity=0.091 Sum_probs=156.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... +.+. .....++.++.+|++|+++++++++.
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKL--KEIA-ADLGKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH-HHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 68888888864211 1110 11134789999999999999887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+.+..
T Consensus 100 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~---------- 168 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP---------- 168 (266)
T ss_dssp TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-----------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC----------
Confidence 389999999998653 23445677889999999777776653 333 57999999976553322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|.++... ..............++ ..+.+
T Consensus 169 ----~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~r~~~ 233 (266)
T 3grp_A 169 ----GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD--KLNEKQKEAIMAMIPM---------KRMGI 233 (266)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH--TCCHHHHHHHHTTCTT---------CSCBC
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh--ccCHHHHHHHHhcCCC---------CCCcC
Confidence 23469999999999998887763 899999999999886431 1112333333333322 24678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+|++++.++... -.|+.+++.+|.
T Consensus 234 ~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 234 GEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 899999999998643 257899998874
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=182.92 Aligned_cols=233 Identities=16% Similarity=0.066 Sum_probs=165.7
Q ss_pred CCCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
....|+||||||+ |+||+++++.|+++ +++|++.+|...... .+.+. ....++.++.+|++|++++.++++.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFA--AEFGSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHH--HHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHH--HHcCCcEEEECCCCCHHHHHHHHHHH
Confidence 3567899999999 99999999999999 678988888632111 11110 1123478999999999999888743
Q ss_pred ----CCCCEEEEccccCCc---------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcC
Q 005818 80 ----EKIDTIMHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++...- +-.++|++||...+....
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---- 162 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP---- 162 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT----
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC----
Confidence 279999999998653 13445667889999999999999987541 124899999977654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|..+..........+........+.
T Consensus 163 ----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-------- 224 (271)
T 3ek2_A 163 ----------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL-------- 224 (271)
T ss_dssp ----------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT--------
T ss_pred ----------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc--------
Confidence 24579999999999999887764 899999999999987653222223333333322221
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHH
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVIDVA 263 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~el~ 263 (676)
..+...+|+|++++.++... ..|+.+++.+|...++.++.
T Consensus 225 -~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~ 267 (271)
T 3ek2_A 225 -KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA 267 (271)
T ss_dssp -SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred -CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence 13678899999999998643 36789999999877665543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=176.04 Aligned_cols=193 Identities=13% Similarity=0.052 Sum_probs=144.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~ 442 (676)
.|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|+|||+||.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence 4689999999999999999999999865 34578999999999998854 57999999996
Q ss_pred cCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 443 TGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 443 ~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
.... ......++.+..+++|+.++.++++++.+. + .++|++||..++.. ..+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~ 148 (244)
T 1cyd_A 87 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------------------FPNLIT 148 (244)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------------CTTBHH
T ss_pred cCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC------------------CCCcch
Confidence 5211 112223455678999999999999988664 3 47888888765521 123467
Q ss_pred hhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 516 YSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
|+.||...|.+++.+.+. .++++..++|+.++++.. ++..+..+.+ ...+++++|+|++++.++.
T Consensus 149 Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~~ 224 (244)
T 1cyd_A 149 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP----LRKFAEVEDVVNSILFLLS 224 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST----TSSCBCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC----ccCCCCHHHHHHHHHHHhC
Confidence 999999999999886433 579999999999998842 1222222221 2478999999999999997
Q ss_pred cCC----CceeEccCCCc
Q 005818 585 RNL----SGIWNFTNPGV 598 (676)
Q Consensus 585 ~~~----~g~yn~~~~~~ 598 (676)
.+. +..+++.++..
T Consensus 225 ~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 225 DRSASTSGGGILVDAGYL 242 (244)
T ss_dssp GGGTTCCSSEEEESTTGG
T ss_pred chhhcccCCEEEECCCcc
Confidence 642 34788877644
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=178.88 Aligned_cols=225 Identities=16% Similarity=0.065 Sum_probs=161.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|.................++.++++|++|+++++++++..
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 44689999999999999999999999 688998888642211000000112347889999999999998887432
Q ss_pred -CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+||..... .+.+++...+++|+.++.++++++... +...++|++||...+....
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---------- 177 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---------- 177 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC----------
Confidence 899999999987542 244456678899999999999887542 2126899999976553321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
..+...|+.+|...+.+++.++.+ +|+++.+++||.|..+..... ...........++ ..+..
T Consensus 178 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~---------~r~~~ 243 (276)
T 3r1i_A 178 --PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPL---------GRMGR 243 (276)
T ss_dssp --SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTT---------SSCBC
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCC---------CCCcC
Confidence 112457999999999999998877 589999999999998765211 1122222222111 13677
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+|++++.++... -.|+++++.+|.
T Consensus 244 pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 244 PEELTGLYLYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp GGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence 899999999998643 267889998874
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=178.53 Aligned_cols=227 Identities=15% Similarity=0.080 Sum_probs=160.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ... .....++.++++|++|++++.++++.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAAD--AAA-TKIGCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHH--HHH-HHHCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHH-HHcCCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 688999888642211 100 01134688999999999998877743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++... .+..+||++||...+....
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------- 170 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG----------- 170 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-----------
Confidence 289999999998653 3345567789999999999999887532 1246899999976654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHH----HHHCCCCceeecCCCceEe
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFIL----LAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|.++... .... .......-... ......
T Consensus 171 ---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~r 239 (277)
T 3gvc_A 171 ---GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ------TAMAMFDGALGAGGARSMI--ARLQGR 239 (277)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------HHHTCC------CCHHHHH--HHHHSS
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH------HhhhcchhhHHHHhhhhhh--hccccC
Confidence 2356999999999999987776 5899999999999886320 0000 00000000000 000114
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
+.+.+|+|++++.++... -.|+.+++.+|...+
T Consensus 240 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 240 MAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred CCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 678999999999998643 267899999886543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=177.73 Aligned_cols=222 Identities=17% Similarity=0.139 Sum_probs=161.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|...... ..... ...++.++.+|++|++++.++++.
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~--~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLA--EAVAA-LEAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHHT-CCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHH-hcCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 688998888642211 10000 124688999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++...- +..+||++||...+ +..
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~------------- 144 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF------------- 144 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-------------
Confidence 2799999999986532 2334556788999999999999987642 13699999998777 211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
+...|+.+|...+.+.+.++.+ +|+++++++||.+.++.... +............+. ..+.+.+|
T Consensus 145 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~~~~~p~d 212 (263)
T 2a4k_A 145 -GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--LPPWAWEQEVGASPL---------GRAGRPEE 212 (263)
T ss_dssp -HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT--SCHHHHHHHHHTSTT---------CSCBCHHH
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh--cCHHHHHHHHhcCCC---------CCCcCHHH
Confidence 1346999999999988887765 38999999999999885421 112222222222211 13788999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 232 VAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 232 ~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
+|++++.++... ..++.+++.+|...
T Consensus 213 vA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 213 VAQAALFLLSEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHhCccccCCcCCEEEECCCccc
Confidence 999999998653 35788999887543
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-20 Score=180.70 Aligned_cols=224 Identities=17% Similarity=0.174 Sum_probs=159.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
...++||||||+|+||++++++|+++ +++|++.++........... ......++.++.+|++|.+++.++++.
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 78888877432211100000 011245789999999999998887743
Q ss_pred -CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++ ++.+ ..+||++||...+.+..
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 158 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF--------- 158 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS---------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC---------
Confidence 2799999999986532 344566789999999988887766 3344 57999999976653322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+.++... ...+..........+. ..+.
T Consensus 159 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~---------~~~~ 222 (256)
T 3ezl_A 159 -----GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIPV---------RRLG 222 (256)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHHHSTT---------SSCB
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc--ccCHHHHHHHHhcCCC---------CCCc
Confidence 2456999999999999888776 4899999999999876431 1122333333222221 1367
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+.+|+|++++.++... ..|+.+++.+|..
T Consensus 223 ~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (256)
T 3ezl_A 223 SPDEIGSIVAWLASEESGFSTGADFSLNGGLH 254 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred CHHHHHHHHHHHhCCcccCCcCcEEEECCCEe
Confidence 8899999999988542 3678999988754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-20 Score=184.15 Aligned_cols=236 Identities=14% Similarity=0.081 Sum_probs=165.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCC---CeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSP---NFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~---~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+. .... ++.++.+|++|++++.++++.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQIL--KAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 34689999999999999999999999 688998888642111 00000 0112 688999999999998887743
Q ss_pred -----CCCCEEEEccccCCcC------CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcC
Q 005818 80 -----EKIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... .+ .+||++||...+....
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~---- 174 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH---- 174 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC----
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC----
Confidence 2799999999975432 234456789999999999999887653 22 6999999987664330
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC--Ch-----HHHHHHHHHCCCCce
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KL-----IPKFILLAMKGKPLP 215 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~--~~-----~~~~~~~~~~~~~~~ 215 (676)
.+...|+.+|...+.+.+.++.+ +|+++++++||.|.++..... .. .......... ..+
T Consensus 175 ---------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~p 243 (297)
T 1xhl_A 175 ---------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE--CIP 243 (297)
T ss_dssp ---------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT--TCT
T ss_pred ---------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHh--cCC
Confidence 12346999999999999887754 589999999999988742110 00 0011111111 111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCCcccHHHHHHHHH
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKKERRVIDVATDIC 267 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~~s~~el~~~i~ 267 (676)
...+...+|+|++++.++..+ ..++.+++.+|......+....+.
T Consensus 244 -------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~ 292 (297)
T 1xhl_A 244 -------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLM 292 (297)
T ss_dssp -------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHH
T ss_pred -------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchh
Confidence 114789999999999998643 367899999887666555444333
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=178.58 Aligned_cols=224 Identities=13% Similarity=0.068 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCc-hhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAG-FIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG-~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+| .||+++++.|+++ +++|++.+|...... .+.+ ......++.++++|++|+++++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-HTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHH-HhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 4568999999998 5999999999999 688999888643211 0111 011235799999999999999888743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... +...+||++||...+....
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------- 169 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH------- 169 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT-------
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC-------
Confidence 2899999999986532 244556788999999999999887653 1246899999976653322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+..+..... ............ .....
T Consensus 170 -------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------~~~~r 232 (266)
T 3o38_A 170 -------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT-SSSELLDRLASD---------EAFGR 232 (266)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------C---------CTTSS
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc-CcHHHHHHHHhc---------CCcCC
Confidence 3456999999999999988776 589999999999988754211 011111111111 12235
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+.+.+|+|++++.++... -.|+++++.+|.
T Consensus 233 ~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 233 AAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred CCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 788999999999998653 257889998774
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=176.93 Aligned_cols=201 Identities=14% Similarity=0.071 Sum_probs=149.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCc-----EEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEY-----KIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~-----~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+|+||||||+|+||+++++.|+++|+.. +|++.+|..... +.+.. .....++.++.+|++|++++.++++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL--EKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHH--HHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHH--HHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 5789999999999999999999995321 888888864211 11000 01134688999999999998887742
Q ss_pred -----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCC
Q 005818 80 -----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----- 153 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR----- 153 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCC-----
Confidence 2799999999986532 23456678899999999999988743 33 57999999987765322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...|.+++.++.+ +|++++++|||.++++....... .. .
T Consensus 154 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~---------~ 204 (244)
T 2bd0_A 154 ---------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-----------EM---------Q 204 (244)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-----------TT---------G
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-----------cc---------c
Confidence 2456999999999999877654 48999999999999986531100 00 1
Q ss_pred EeeeeHHHHHHHHHHHHhcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+++++|+|++++.++..+.
T Consensus 205 ~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 205 ALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp GGSBCHHHHHHHHHHHHTSCT
T ss_pred ccCCCHHHHHHHHHHHHhCCc
Confidence 157899999999999997654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=177.89 Aligned_cols=228 Identities=14% Similarity=0.107 Sum_probs=156.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.++.......... .......++.++.+|++|+++++++++.
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 55789999999999999999999999 6788887443221100000 0011245689999999999998888743
Q ss_pred -CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEeccccc-CCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVY-GETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vy-g~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++...- +-.++|++||...+ ....
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 153 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP---------- 153 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST----------
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC----------
Confidence 279999999987622 23344567889999999999999987642 12489999997766 3222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCCCCCChH-HHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLI-PKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+++ +++.++.||.|..+.... +. +........ ......+.+
T Consensus 154 ----~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~---------~~p~~r~~~ 218 (259)
T 3edm_A 154 ----GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT--FTKPEVRERVAG---------ATSLKREGS 218 (259)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------CCBC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc--ccChHHHHHHHh---------cCCCCCCcC
Confidence 234699999999999999887753 899999999998775421 11 111111111 112235778
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCcccH
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKKERRV 259 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~~~s~ 259 (676)
++|+|++++.++.... .|+.|++.+|...+.
T Consensus 219 pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 219 SEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred HHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 9999999999986532 688999988865443
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=177.24 Aligned_cols=225 Identities=14% Similarity=0.079 Sum_probs=164.3
Q ss_pred CCCCeEEEEcCCch--hHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGF--IASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.++||||||+|+ ||+++++.|+++ +++|++.+|.......+.+.. ...++.++.+|++|++++.++++.
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCA--EFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHG--GGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHH--hcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 45689999999977 999999999999 678888888651111111111 123588999999999998888743
Q ss_pred --CCCCEEEEccccCCcC---------CcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCC
Q 005818 80 --EKIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++...- +..+||++||...+....
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 174 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP----- 174 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT-----
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC-----
Confidence 3799999999987531 3445666789999999999999887531 246999999977654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.|..+...................+.
T Consensus 175 ---------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 236 (280)
T 3nrc_A 175 ---------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL--------- 236 (280)
T ss_dssp ---------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------
T ss_pred ---------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------
Confidence 2456999999999999987776 4899999999999987653222223333333222221
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+...+|+|++++.++... ..++.+++.+|..
T Consensus 237 ~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 237 KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence 13678899999999988643 3688999988854
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=170.99 Aligned_cols=208 Identities=12% Similarity=-0.002 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d 83 (676)
+++|++|||||+|+||+++++.|+++ +++|++.+|... +|++|+++++++++. .++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g~id 61 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG--------------------LDISDEKSVYHYFETIGAFD 61 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT--------------------CCTTCHHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc--------------------cCCCCHHHHHHHHHHhCCCC
Confidence 34689999999999999999999999 789999988531 899999999988854 3799
Q ss_pred EEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 157 (676)
Q Consensus 84 ~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 157 (676)
++||+||.... +.+.+++...+++|+.++.++++++...- +-.++|++||...+.... +.
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------~~ 127 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA--------------NT 127 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT--------------TC
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC--------------Cc
Confidence 99999997632 23445667889999999999999987642 124899999987665432 24
Q ss_pred ChhHHHHHHHHHHHHHHHHHcC-CCEEEEeeCCccCCCCCCCC--hHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 158 NPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQFPEK--LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 158 ~~Y~~sK~~~E~~~~~~~~~~~-l~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
..|+.+|...+.+++.++.+++ +++.+++||.+.++...... ....+........+. ..+.+++|+|+
T Consensus 128 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~ 198 (223)
T 3uce_A 128 YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAM 198 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHH
Confidence 5699999999999999988865 99999999999987542211 111222222222221 14778999999
Q ss_pred HHHHHHhcCC-CCceEEEcCCCcc
Q 005818 235 AFDTILHKGE-VGHVYNIGTKKER 257 (676)
Q Consensus 235 ai~~~~~~~~-~~~~y~i~~~~~~ 257 (676)
+++.+++... .++.+++.+|..+
T Consensus 199 ~~~~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 199 AYLFAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHccCCCCCCcEEEecCCeec
Confidence 9999987543 6789999988654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=173.28 Aligned_cols=213 Identities=14% Similarity=0.117 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++.+|..... ..+..+.+|++|++++.++++.
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHH-----------HHhcCeeccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 68898888854211 1122488999999998877743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+ ..+||++||...+.+..
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG---------- 148 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCC----------
Confidence 379999999998653 234456678999999999999988753 33 57999999976543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.+.++... .+............+ ...+.+
T Consensus 149 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~p---------~~~~~~ 213 (247)
T 1uzm_A 149 ----NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR--ALDERIQQGALQFIP---------AKRVGT 213 (247)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HSCHHHHHHHGGGCT---------TCSCBC
T ss_pred ----CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh--hcCHHHHHHHHhcCC---------CCCCcC
Confidence 2346999999999999887776 4899999999999765321 000111111111111 114789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+|+|++++.++... ..++.+++.+|..
T Consensus 214 ~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 214 PAEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 999999999998643 2578899988753
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.8e-19 Score=170.98 Aligned_cols=218 Identities=18% Similarity=0.139 Sum_probs=157.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... +.+... . ++.++.+|++|+++++++++.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPL--REAAEA-V--GAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHT-T--TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHH-c--CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 68888888864211 111101 0 378899999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++... .+..+||++||...++..
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 143 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------ 143 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------
Confidence 3699999999976432 234456788999999999999887643 125799999997744322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
....|+.+|...+.+.+.++.+ +|+++++++||.+..+.... +............+. ..+.+.
T Consensus 144 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~~~~~~ 209 (245)
T 1uls_A 144 ---GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK--VPEKVREKAIAATPL---------GRAGKP 209 (245)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS--SCHHHHHHHHHTCTT---------CSCBCH
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh--cCHHHHHHHHhhCCC---------CCCcCH
Confidence 1346999999999998887765 38999999999998875421 111222222221111 137789
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+|+|++++.++..+ ..++.+++.+|.
T Consensus 210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 238 (245)
T 1uls_A 210 LEVAYAALFLLSDESSFITGQVLFVDGGR 238 (245)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 99999999998643 257889888774
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-20 Score=188.45 Aligned_cols=238 Identities=16% Similarity=0.102 Sum_probs=168.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc--------ccccCCC--CCCCCCCeEEEEecCCCHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC--------SNLKNLN--PSRLSPNFKFIKGDVASADLVH 74 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--------~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~ 74 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.... ...+... ......++.++.+|++|++++.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 44689999999999999999999999 6889888875210 0000000 0112346889999999999988
Q ss_pred HHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC---------CCceEEEEecccc
Q 005818 75 FILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG---------QIKRFIHVSTDEV 136 (676)
Q Consensus 75 ~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---------~~~~~v~~SS~~v 136 (676)
++++. .++|+|||+||.... +.+.+++...+++|+.++.++++++...- .-.+||++||...
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 87743 289999999998753 23455677899999999999998875421 0148999999766
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCC
Q 005818 137 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKP 213 (676)
Q Consensus 137 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 213 (676)
+.... ....|+.+|...+.+++.++.+ +|+++.+++|| +..+.... .......
T Consensus 183 ~~~~~--------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~--~~~~~~~------- 238 (322)
T 3qlj_A 183 LQGSV--------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET--VFAEMMA------- 238 (322)
T ss_dssp HHCBT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC--SCCC----------
T ss_pred ccCCC--------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh--hhhhhhh-------
Confidence 53322 2346999999999999988877 58999999999 65543311 1000000
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc-----------------cHHHHHHHHHHHhCCC
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER-----------------RVIDVATDICKLFSLN 273 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~-----------------s~~el~~~i~~~~g~~ 273 (676)
.......++.++|+|.+++.++... -.|+.|++.+|... ++.|+++.+.+.+|.+
T Consensus 239 -----~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 239 -----TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp ----------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred -----ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 0111224567899999999998643 26888999888654 7799999999988754
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.8e-19 Score=178.08 Aligned_cols=228 Identities=18% Similarity=0.117 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC------------CCCCCCeEEEEecCCCHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP------------SRLSPNFKFIKGDVASADL 72 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~------------~~~~~~v~~v~~Dl~d~~~ 72 (676)
+++|+||||||+|+||+++++.|+++ +++|+++++............ .....++.++.+|++|+++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 45689999999999999999999999 678888876532211110000 0124578999999999999
Q ss_pred HHHHHcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCC
Q 005818 73 VHFILLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 73 ~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~ 139 (676)
+.++++. .++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+...+||++||...+..
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 201 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence 8888743 289999999998653 234556778899999999999988743 222367999999776643
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHH------------H
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPK------------F 204 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~------------~ 204 (676)
... ...|+.+|...+.+++.++.++ |+++.+++||.|.++.......... .
T Consensus 202 ~~~--------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 267 (317)
T 3oec_A 202 APG--------------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDA 267 (317)
T ss_dssp CTT--------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHH
T ss_pred CCC--------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHH
Confidence 322 3469999999999999988774 8999999999998864211000000 0
Q ss_pred HHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 205 ILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
......... ....+++++|+|+++++++... -.|+++++.+|..
T Consensus 268 ~~~~~~~~~--------~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 268 AELFSQLTL--------LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp HHHHTTTCS--------SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhhhcc--------CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 010111111 1135889999999999988543 2688999988753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=178.48 Aligned_cols=231 Identities=16% Similarity=0.114 Sum_probs=150.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc---cCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL---KNLNP--SRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~---~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
|++++||||||+|+||+++++.|+++ |++|++.+|....... +.+.. .....++..+.+|++|++++.++++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 45689999999999999999999999 6888887775211110 00000 01235789999999999999888743
Q ss_pred C-----CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 E-----KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ~-----~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. ++|+|||+||.... ..+.+++...+++|+.|+.++++++ ++.+ ..++|++||...+.....
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~---- 155 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPP---- 155 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCS----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCC----
Confidence 2 89999999997643 2244556688999999999999988 4444 579999999776633211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC-----CChHHHHHHHHHCCCCceeec
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 218 (676)
....|+.||...|.+++.++.+ +|+++++++||.+.++.... ............... ...+.
T Consensus 156 ---------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 225 (324)
T 3u9l_A 156 ---------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPN-AGLGE 225 (324)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTT-TTHHH
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccc-cCCHH
Confidence 1346999999999999998877 48999999999998664311 011111111111000 00000
Q ss_pred CCC-----ceEeeeeHHHHHHHHHHHHhcCC--CCceEEEc
Q 005818 219 DGS-----NVRSYLYCEDVAEAFDTILHKGE--VGHVYNIG 252 (676)
Q Consensus 219 ~~~-----~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~ 252 (676)
.-. ...+..+++|+|++++.+++.+. ....+.++
T Consensus 226 ~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g 266 (324)
T 3u9l_A 226 EIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD 266 (324)
T ss_dssp HHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence 000 00012578999999999998763 23345554
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=177.63 Aligned_cols=196 Identities=15% Similarity=0.113 Sum_probs=146.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 90 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999765 34568999999999888743 579
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+|||+||.......+...++....+++|+.++.++++++. +.+ .++|++||...+. +
T Consensus 91 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~ 152 (255)
T 1fmc_A 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------K 152 (255)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------------C
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC------------------C
Confidence 9999999753111122345566789999999999999885 334 4677777765542 1
Q ss_pred CCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+.+.|+.||...|.+++.+.+. .++++.+++|+.++++.. +...+....+ ...+.+++|+|+++
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~ 228 (255)
T 1fmc_A 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP----IRRLGQPQDIANAA 228 (255)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS----SCSCBCHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCC----cccCCCHHHHHHHH
Confidence 234578999999999999887433 379999999999998741 2222332221 13578999999999
Q ss_pred HHHHhcC---C-CceeEccCCCcccH
Q 005818 580 VEMAKRN---L-SGIWNFTNPGVVSH 601 (676)
Q Consensus 580 ~~~~~~~---~-~g~yn~~~~~~~s~ 601 (676)
+.++..+ . +++||+.++..+|+
T Consensus 229 ~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 229 LFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred HHHhCCccccCCCcEEEECCceeccC
Confidence 9998754 2 34999999987764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=177.50 Aligned_cols=220 Identities=18% Similarity=0.099 Sum_probs=155.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+|+||||||+|+||+++++.|+++ +++|++.+|...... .+.+ .....++.++++|++|++++.++++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEI--NQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999 678988888642111 0000 01134688999999999998887742
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++... +...+||++||...+.+..
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 147 (256)
T 1geg_A 78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP---------- 147 (256)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----------
Confidence 2799999999976432 234456678999999999988777542 2136999999976543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHH-----------HHHHHHHCCCCceee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP-----------KFILLAMKGKPLPIH 217 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 217 (676)
+...|+.+|...+.+++.++.+ +|+++++++||.+.++... .... .......... +
T Consensus 148 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--p-- 217 (256)
T 1geg_A 148 ----ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA--EIDRQVSEAAGKPLGYGTAEFAKRI--T-- 217 (256)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH--HHHHHHHHHHTCCTTHHHHHHHTTC--T--
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh--hhhhhccccccCChHHHHHHHHhcC--C--
Confidence 1346999999999999888765 4899999999999876321 0100 0011111111 1
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 218 -----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (256)
T 1geg_A 218 -----LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253 (256)
T ss_dssp -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred -----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 124789999999999998653 257889998874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=174.71 Aligned_cols=216 Identities=14% Similarity=0.173 Sum_probs=155.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
+|+||||||+|+||+++++.|+++ +++|++.+|.... ..+.+ ++..+.+|++| +++.++++. .+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~-~~~~~-------~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEE-AAQSL-------GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHH-------TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH-HHHhh-------CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 579999999999999999999999 6889998886432 11111 27889999999 776665431 37
Q ss_pred CCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|+|||+|+.... +.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+....
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 137 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG------------ 137 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC------------
Confidence 9999999997643 22445667899999999999998874 334 67999999988775431
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
..+...|+.+|...+.+.+.++.+. |+++++++||.+.++........+.+........+. ..+.+.+
T Consensus 138 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~ 208 (239)
T 2ekp_A 138 PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM---------GRWARPE 208 (239)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT---------SSCBCHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC---------CCCcCHH
Confidence 1234579999999999999887764 899999999999887531000001222222222111 1378899
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 231 DVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 231 D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
|+|++++.++... ..++.+++.+|.
T Consensus 209 dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 209 EIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 9999999988642 257788888763
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=179.06 Aligned_cols=227 Identities=15% Similarity=0.054 Sum_probs=153.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
+++++||||||+|+||++++++|+++ +++|++.+|...... .+. .....++.++.+|++|.++++++++..
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAE--RVA-GEIGDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHH-HHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHH--HHH-HHhCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 44689999999999999999999999 688999988642211 110 011347899999999999988877432
Q ss_pred -CCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHcC-------CCceEEEEecccccCCCCCCcCCC
Q 005818 81 -KIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKITG-------QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 81 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-------~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
++|+|||+|+..... .+.+++...+++|+.++.++.+++...- ...+||++||...+....
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------ 155 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP------ 155 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC------
Confidence 899999999986521 2344566789999999999988775321 124699999976653322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+++.++.+ +++++.+++||.+.++..... .....+...... ...
T Consensus 156 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~ 218 (261)
T 3n74_A 156 --------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRD---------SIP 218 (261)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------CT
T ss_pred --------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhh---------cCC
Confidence 2346999999999999988876 489999999999988754210 000111111111 111
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRV 259 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~ 259 (676)
...+++++|+|++++.++... ..|+.+++.+|..++-
T Consensus 219 ~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 219 MGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred cCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 225889999999999998643 2688999999876543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-19 Score=178.14 Aligned_cols=226 Identities=15% Similarity=0.069 Sum_probs=164.3
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+| +||+++++.|+++ +++|++.+|...... ...+. ....++.++++|++|+++++++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLA--ESLGVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHH--HHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHH--HhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 3468999999998 9999999999999 688988888642111 00000 0113468899999999999888743
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~------ 177 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP------ 177 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC------
Confidence 379999999998652 34555677899999999999999987642 135899999977654322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+++.++.++ |+++.+++||.|..+...................++ .
T Consensus 178 --------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 240 (296)
T 3k31_A 178 --------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------R 240 (296)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------S
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------C
Confidence 24579999999999999887764 899999999999998653222222222322222221 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+...+|+|++++.++... ..|+++++.+|..+
T Consensus 241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 3667899999999998642 36889999988543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=182.85 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=149.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
++++||||||+|+||+++++.|+++ +++|++.+|.................++.++.+|++|.+++.++++. .
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 4579999999999999999999999 68899998864321100000011245789999999999999888743 2
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+||.... +.+.+++...+++|+.++.++++++.. .+...+||++||...+.+..
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 176 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA----------- 176 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-----------
Confidence 89999999998653 234456678999999999999988743 22236899999977664332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHH-----HHCCCCceeecCCCceE
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILL-----AMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.|..+.. ...... .....+...++......
T Consensus 177 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (301)
T 3tjr_A 177 ---GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV------SNSERIRGADYGMSATPEGAFGPLPTQD 247 (301)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH------HHHHHHC---------------------
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc------cccccccchhhccccChhhhcccccccc
Confidence 23469999999999998887764 89999999999976532 111100 00011111122223345
Q ss_pred eeeeHHHHHHHHHHHHhcCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~ 244 (676)
.+++++|+|++++.+++++.
T Consensus 248 ~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 248 ESVSADDVARLTADAILANR 267 (301)
T ss_dssp -CCCHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHhcCC
Confidence 68999999999999998764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=177.27 Aligned_cols=223 Identities=16% Similarity=0.141 Sum_probs=157.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.+++++||||||+|+||+++++.|+++ +++|++.+|....... ..+. .....++.++.+|++|++++.++++.
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 6889988886421110 0000 00134688899999999998887743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEeccc-ccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDE-VYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~-vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||.. .+..
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------- 165 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT-------- 165 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccC--------
Confidence 2799999999986532 2334566788999999999988774 223 57999999976 2211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChH--HHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI--PKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 222 (676)
..+...|+.+|...+.+++.++.+ +|+++++++||.+.++... ... ...........+.
T Consensus 166 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p~-------- 229 (267)
T 1vl8_A 166 ------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE--AVFSDPEKLDYMLKRIPL-------- 229 (267)
T ss_dssp ------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH--HHHTCHHHHHHHHHTCTT--------
T ss_pred ------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc--ccccChHHHHHHHhhCCC--------
Confidence 112457999999999999988776 4899999999999877531 111 1122222222111
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+.+.+|+|++++.++... ..++.+.+.+|.
T Consensus 230 -~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 230 -GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp -SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence 13678899999999998643 257888888774
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=180.72 Aligned_cols=228 Identities=14% Similarity=0.085 Sum_probs=159.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCC-CCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSR-LSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~-~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+.... ...++.++.+|++|+++++++++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999 688999888642111 00110000 011689999999999998887743
Q ss_pred ---CCCCEEEEccccCCcC--------CcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCC
Q 005818 80 ---EKIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 156 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ----- 156 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC-----
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC-----
Confidence 2799999999976432 2334567889999999999998876421 016999999987664330
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC--Ch-----HHHHHHHHHCCCCcee
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KL-----IPKFILLAMKGKPLPI 216 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~--~~-----~~~~~~~~~~~~~~~~ 216 (676)
.+...|+.+|...+.+++.++.+ +|+++++++||.+.++..... .- ...+....... .+
T Consensus 157 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~p- 225 (280)
T 1xkq_A 157 --------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC--IP- 225 (280)
T ss_dssp --------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--CT-
T ss_pred --------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--CC-
Confidence 12346999999999999888764 489999999999998743111 00 00111111111 11
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCCc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKKE 256 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~ 256 (676)
...+.+.+|+|++++.++..+ ..++.+++.+|..
T Consensus 226 ------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 226 ------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp ------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred ------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 124789999999999988643 3678899988753
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-19 Score=172.11 Aligned_cols=210 Identities=14% Similarity=0.145 Sum_probs=152.4
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|..+.++|+||||||+|+||+++++.|+++ +++|++.+|..... ......+.+|++|++++.++++.
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~ 68 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEV 68 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhc----------cCCcEEEEcCCCCHHHHHHHHHHH
Confidence 566667789999999999999999999999 68899988864211 12357788999999998887743
Q ss_pred ------CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ------EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ------~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 142 (241)
T 1dhr_A 69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------ 142 (241)
T ss_dssp HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------
T ss_pred HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC------
Confidence 379999999997642 22334566788999999999999887531 125899999987764322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+++.++.+. |+++++++||.+-.+. . ....... .
T Consensus 143 --------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~------~----~~~~~~~---------~ 195 (241)
T 1dhr_A 143 --------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------N----RKSMPEA---------D 195 (241)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------H----HHHSTTS---------C
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc------c----cccCcch---------h
Confidence 23469999999999999887653 5999999999886542 1 1111111 1
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
...++..+|+|++++.++.... .++.+.+.++.
T Consensus 196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 1235778999999999986532 46778876654
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=177.18 Aligned_cols=215 Identities=8% Similarity=0.021 Sum_probs=142.7
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|.-.+++++||||||+|+||+++++.|+++ |++|++.+|.................++.++.+|++|++++.++++.
T Consensus 1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp ----CCSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHH
Confidence 444567789999999999999999999999 67899998864321100000011145789999999999999888743
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+.+..
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 150 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGS------- 150 (252)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCT-------
T ss_pred HhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCC-------
Confidence 379999999998653 23445667889999999999988773 333 46999999976654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCE-EEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPV-ITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~-~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+++.++.++ |+++ .++.||.+..+... ........... ......
T Consensus 151 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~--~~~~~~~~~~~---------~~~~~~ 212 (252)
T 3h7a_A 151 -------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR--ERREQMFGKDA---------LANPDL 212 (252)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------------
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh--ccchhhhhhhh---------hcCCcc
Confidence 23469999999999999887764 7899 89999999776442 11111111110 111122
Q ss_pred eeeeHHHHHHHHHHHHhcCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~ 244 (676)
+...+|+|++++.++..+.
T Consensus 213 -~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 213 -LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp --CCHHHHHHHHHHHHHCCG
T ss_pred -CCCHHHHHHHHHHHHhCch
Confidence 7899999999999998654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-19 Score=174.20 Aligned_cols=223 Identities=17% Similarity=0.163 Sum_probs=157.6
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+.+++|+||||||+|+||+++++.|+++ +++|++.+|..... +.+... ...++.++++|++|++++.++++.
T Consensus 2 ~~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 2 NRLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAG--QQLAAE-LGERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHH--HHHHHH-HCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHHH-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4567789999999999999999999999 68899988864211 110000 134688999999999998877743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+|+..... .+.+++...+++|+.++.++.+++. +.+ .+||++||...+.+..
T Consensus 77 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~-------- 146 (253)
T 1hxh_A 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIE-------- 146 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCC--------
Confidence 3689999999986532 2344567889999998887776543 333 7999999987764332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---c--CCCEEEEeeCCccCCCCC---CCChHHHHHHHHHCCCCceeecCCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---Y--GLPVITTRGNNVYGPNQF---PEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~--~l~~~ilR~~~i~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...|.+++.++.+ + |++++++|||.++++... +.... ......... ..
T Consensus 147 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~-----~~ 211 (253)
T 1hxh_A 147 ------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDPK-----LN 211 (253)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBTT-----TB
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhh----HHHHhhhhc-----cC
Confidence 2346999999999999887765 3 899999999999987421 00000 010111000 00
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
....+.+.+|+|++++.++..+ ..++.+++.+|.
T Consensus 212 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 212 RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred ccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 1124789999999999998653 257889998774
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=179.00 Aligned_cols=222 Identities=16% Similarity=0.098 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||++++++|+++ +++|++.+|...... +.+. ......++.++++|++|++++.++++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVA-DALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 688888888532111 0000 011245789999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++.+++.. .+ ..+||++||...+.+..
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 174 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNM-------- 174 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCC--------
Confidence 2899999999987542 24456678899999999998887643 23 57999999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+ .++++.+++||.+..+... .+.......... ......+
T Consensus 175 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~---------~~~~~~~ 237 (271)
T 4iin_A 175 ------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA--NLKDELKADYVK---------NIPLNRL 237 (271)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGG---------GCTTCSC
T ss_pred ------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh--hhcHHHHHHHHh---------cCCcCCC
Confidence 2456999999999999988876 4899999999999877542 111111111111 1112257
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+.+|+|++++.++... ..|+.+++.+|-
T Consensus 238 ~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 238 GSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 88999999999998653 268899998874
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=178.03 Aligned_cols=226 Identities=15% Similarity=0.046 Sum_probs=161.2
Q ss_pred CCCCeEEEEcCCch--hHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGF--IASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++|+||||||+|+ ||+++++.|+++ +++|++.+|...... ...+. ....++.++.+|++|+++++++++.
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLA--EELGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHH--HHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHH--HhcCCceEEECCCCCHHHHHHHHHHHH
Confidence 45689999999988 999999999999 688888888632110 00000 0123588999999999998888743
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++...- +-.+||++||...+....
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------ 178 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP------ 178 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT------
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC------
Confidence 379999999998641 33455677899999999999999887532 235999999977664332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+++.++.++ |+++.+++||.|..+...................+. .
T Consensus 179 --------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 241 (293)
T 3grk_A 179 --------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------R 241 (293)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------S
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------C
Confidence 24569999999999999887763 899999999999987543222222333332222221 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+...+|+|++++.++... ..++.+++.+|..+
T Consensus 242 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence 3677899999999998643 36889999988643
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=174.89 Aligned_cols=221 Identities=17% Similarity=0.224 Sum_probs=160.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.+++|+||||||+|+||+++++.|+++ +++|++.+|...... ... .....++..+++|++|+++++++++.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAK--AAA-ASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHH--HHH-HHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHH-HHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 466799999999999999999999999 688999888642211 100 01145788999999999998888743
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHH----HHHcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEA----CKITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.++ +++.+...++|++||...+.+..
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 148 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP--------- 148 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC---------
Confidence 279999999998653 234456778999999999999987 44433347999999976654332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+.+.++.+ +|+++.+++||.|..+.... ......+.... .+ ...
T Consensus 149 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r 211 (247)
T 3rwb_A 149 -----NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKG 211 (247)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCS
T ss_pred -----CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCC
Confidence 2346999999999999888776 58999999999998763211 11111111110 11 113
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+...+|++++++.++... -.|+.+++.+|.
T Consensus 212 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 212 KGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 567899999999998653 267889998774
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-19 Score=171.72 Aligned_cols=213 Identities=12% Similarity=0.092 Sum_probs=151.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~ 82 (676)
.+++++||||||+|+||+++++.|+++ +++|++.+|... ..+.+ ..+.++ +|+ .++++++++. .++
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~------~~~~~~-~D~--~~~~~~~~~~~~~i 82 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEE--LLKRS------GHRYVV-CDL--RKDLDLLFEKVKEV 82 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHT------CSEEEE-CCT--TTCHHHHHHHSCCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHH--HHHhh------CCeEEE-eeH--HHHHHHHHHHhcCC
Confidence 356789999999999999999999999 688999888641 11111 256677 999 3344444432 389
Q ss_pred CEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHH----HHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 83 DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 83 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
|+|||+||..... .+.+++...+++|+.++.++.++ +++.+ ..+||++||...|....
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------- 148 (249)
T 1o5i_A 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE------------- 148 (249)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC-------------
Confidence 9999999976532 23445668889999998776554 44444 67999999988875432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHH-HHHCCCCceeecCCCceEeeeeHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+...|+.+|...+.+.+.++.+ +|+++++++||.+.++.... ....... ......+. ..+.+++
T Consensus 149 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~p~---------~~~~~~~ 216 (249)
T 1o5i_A 149 -NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE--LLSEEKKKQVESQIPM---------RRMAKPE 216 (249)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH--HSCHHHHHHHHTTSTT---------SSCBCHH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc--cchhhHHHHHHhcCCC---------CCCcCHH
Confidence 2346999999999999887765 48999999999999885310 0011111 22222111 2478999
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 231 DVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 231 D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
|+|++++.++... ..++.|++.+|.
T Consensus 217 dvA~~i~~l~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 217 EIASVVAFLCSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 9999999988643 257889998875
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.8e-19 Score=170.13 Aligned_cols=206 Identities=14% Similarity=0.129 Sum_probs=151.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||+|+||+++++.|+++ +++|++.+|..... .....++.+|++|++++.++++.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCcccc----------ccccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 68999998864211 12356788999999998877642
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++.+++...- +..+||++||...+.+..
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 138 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP---------- 138 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC----------
Confidence 379999999997642 22334567889999999999999887631 125899999987764322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+. |+++++++||.+.++.. ....... ....+
T Consensus 139 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~----------~~~~~~~---------~~~~~ 195 (236)
T 1ooe_A 139 ----SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN----------RKWMPNA---------DHSSW 195 (236)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH----------HHHSTTC---------CGGGC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch----------hhcCCCc---------ccccc
Confidence 23469999999999999988765 49999999999987521 1111111 11135
Q ss_pred eeHHHHHHHHHHHHhc----CCCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHK----GEVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~----~~~~~~y~i~~~~ 255 (676)
+..+|+|++++.++.. ...++.+++.++.
T Consensus 196 ~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 196 TPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred CCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 6789999999866632 1247778877654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.1e-20 Score=184.90 Aligned_cols=224 Identities=12% Similarity=0.065 Sum_probs=143.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|+..... ...+.......++.++.+|++|++++.++++.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688999888643211 00011111123689999999999998888743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC---------CCceEEEEecccccCCCCCCc
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG---------QIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---------~~~~~v~~SS~~vyg~~~~~~ 144 (676)
.++|+|||+||..... .+.+++...+++|+.|+.++++++.... ...+||++||...+.+...
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~-- 161 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS-- 161 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS--
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC--
Confidence 3789999999976432 2445567899999999999998876432 1357999999877654332
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC-C
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD-G 220 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 220 (676)
...|+.||...+.+++.++.+ .|+++++++||.|.++........+..+.............. .
T Consensus 162 ------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (319)
T 3ioy_A 162 ------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA 229 (319)
T ss_dssp ------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------C
T ss_pred ------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHH
Confidence 246999999666555554433 489999999999988754322211111111000000000000 0
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
......++++|+|++++.+++++.
T Consensus 230 ~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 230 GVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HhhhcCCCHHHHHHHHHHHHHcCC
Confidence 001112799999999999998753
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=169.93 Aligned_cols=205 Identities=16% Similarity=0.139 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.|+|+||||||+|+||+++++.|+++ +++|++++|..... ....+.+|++|.+++.++++.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~------------~~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPN------------ADHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTT------------SSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccc------------cccceEEEeCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 68899998864211 124678999999998887743
Q ss_pred CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++...- +-.+||++||...+.+..
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 153 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS------------ 153 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC------------
Confidence 268999999997542 23345567889999999999999987642 124899999977664322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+...|+.+|...+.+++.++.+ .++++.+++||.|.++. .+...... ....+++
T Consensus 154 --~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----------~~~~~~~~---------~~~~~~~ 212 (251)
T 3orf_A 154 --GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----------NRKYMSDA---------NFDDWTP 212 (251)
T ss_dssp --TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----------HHHHCTTS---------CGGGSBC
T ss_pred --CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----------hhhhcccc---------cccccCC
Confidence 2356999999999999998877 47999999999997642 11211111 1225788
Q ss_pred HHHHHHHHHHHHhc---C-CCCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHK---G-EVGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~---~-~~~~~y~i~~~~~ 256 (676)
.+|+|++++.++.. . ..|+.+++..++.
T Consensus 213 ~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 213 LSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp HHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred HHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence 99999999999976 2 2577888877654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=175.72 Aligned_cols=227 Identities=14% Similarity=0.079 Sum_probs=160.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.++++++|||||+|+||+++++.|+++ +++|++.++...... +.+. ......++.++++|++|++++.++++.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDA-EKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 355789999999999999999999999 688888766432110 0000 011245789999999999999888743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||..... .+.+++...+++|+.++.++.+++...- +-.++|++||.....
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------- 158 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD------------- 158 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-------------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-------------
Confidence 2899999999987532 2455677899999999999999887643 124899999965211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC----------CChHHHHHHHHHCCCCceeec
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP----------EKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 218 (676)
.+..+...|+.+|...+.+++.++.+ +|+++.+++||.+..+.... ...............+
T Consensus 159 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 233 (270)
T 3is3_A 159 FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP----- 233 (270)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST-----
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC-----
Confidence 01123457999999999999988876 48999999999998874310 0011112222221111
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+.+|+|++++.++... -.|+.+++.+|.
T Consensus 234 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 234 ----LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp ----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred ----CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 113678999999999998643 257889998774
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.8e-19 Score=174.26 Aligned_cols=232 Identities=15% Similarity=0.112 Sum_probs=161.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-C
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-K 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~ 81 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... .+.+........+..+.+|++|++.+.++++.. +
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 44689999999999999999999999 688999888642211 011111111345788999999999999888654 7
Q ss_pred CCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|++||+||..... .+.+++...+++|+.++.++.+++.. .+ ..++|++||...+.+..
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 152 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ------------ 152 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC------------
Confidence 99999999986532 23445667899999998888766543 33 57999999987664322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC-------C--CChHHHHHHHHHCCCCceeecCCC
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF-------P--EKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
+...|+.+|...+.+++.++.++ |+++.++.||.+..+... + ........+....... ...
T Consensus 153 --~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 225 (267)
T 3t4x_A 153 --EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-----PTS 225 (267)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-----TTC
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-----Ccc
Confidence 24569999999999999988765 689999999999875210 0 0001111111110000 000
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
....+.+++|+|++++.++... -.|+.+++.+|...+
T Consensus 226 ~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 226 IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred cccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 1225788999999999988643 268899999886554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=172.01 Aligned_cols=222 Identities=15% Similarity=0.090 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.++...... +.+. ......++.++.+|++|+++++++++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERA-QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688888765432110 0000 011245789999999999998887743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|++||+||..... .+.+++...+++|+.++.++++++... .+..++|++||....-.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~------------- 172 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV------------- 172 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-------------
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-------------
Confidence 2899999999986532 345567789999999999999988754 22469999998533211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
+..+...|+.+|...+.+++.++.++ |+++.+++||.|.++..... .....+ ....+. ..+..
T Consensus 173 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~---------~r~~~ 239 (271)
T 3v2g_A 173 PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQ----RERIAT---------GSYGE 239 (271)
T ss_dssp CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHH----HHTCTT---------SSCBC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHH----HhcCCC---------CCCCC
Confidence 11224579999999999999887764 89999999999998865321 122121 111111 13678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+|++++.++... -.|+.+++.+|.
T Consensus 240 pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 240 PQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 899999999988542 367889998774
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-19 Score=172.83 Aligned_cols=226 Identities=19% Similarity=0.170 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.. ...++.++++|++|+++++++++.
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGR--ALEQ--ELPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHH--HCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHH--HhcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 688988888642111 1100 012478999999999999887743
Q ss_pred CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++++++... .+..+||++||...+.+..
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 149 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------- 149 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------
Confidence 279999999997542 1233456788999999999999888531 0137999999965432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC-----CCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF-----PEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+++.++.+ +|+++.+++||.++++... .......+. ......+ + .
T Consensus 150 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~p--~-------~ 216 (270)
T 1yde_A 150 ---QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIR-EGMLAQP--L-------G 216 (270)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHH-HHHHTST--T-------S
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHH-HHhhcCC--C-------C
Confidence 1346999999999999988765 5899999999999987421 001111111 1111111 1 1
Q ss_pred eeeeHHHHHHHHHHHHhcC--CCCceEEEcCCCcccHH
Q 005818 225 SYLYCEDVAEAFDTILHKG--EVGHVYNIGTKKERRVI 260 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~--~~~~~y~i~~~~~~s~~ 260 (676)
.+...+|+|++++.++... -.++.+++.+|..+...
T Consensus 217 r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~ 254 (270)
T 1yde_A 217 RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG 254 (270)
T ss_dssp SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred CCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence 3678899999999888643 25788999988765543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-19 Score=173.31 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=148.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCC-CcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYP-EYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-- 80 (676)
+++++||||||+|+||+++++.|+++|. +++|++++|...... ...+. ....++.++.+|++|.+++.++++..
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA--KNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH--HHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh--ccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 5678999999999999999999999941 189999988653211 00000 01347899999999999988887422
Q ss_pred -----CCCEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHHHc----------CC----CceEEEEecccc
Q 005818 81 -----KIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKIT----------GQ----IKRFIHVSTDEV 136 (676)
Q Consensus 81 -----~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~----~~~~v~~SS~~v 136 (676)
++|+|||+||... ...+.+++...+++|+.++.++++++... +. ..+||++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 7999999999865 22334456678999999999999888643 10 368999999877
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCC
Q 005818 137 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKP 213 (676)
Q Consensus 137 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 213 (676)
+.... +..+...|+.+|...|.+++.++.+ +++++++++||.|..+.... .
T Consensus 177 ~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------~- 230 (267)
T 1sny_A 177 SIQGN-----------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------S- 230 (267)
T ss_dssp CSTTC-----------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------T-
T ss_pred cccCC-----------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------C-
Confidence 65432 1123457999999999999988776 58999999999997764311 0
Q ss_pred ceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 214 LPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 214 ~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
.++..+|+++.++.++...
T Consensus 231 -----------~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 231 -----------APLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp -----------CSBCHHHHHHHHHHHHHHC
T ss_pred -----------CCCCHHHHHHHHHHHHHhc
Confidence 2467799999999998754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-20 Score=182.07 Aligned_cols=227 Identities=12% Similarity=0.044 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+. .....++.++++|++|++++.++++.
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLA-GATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 678998888642110 00000 01134789999999999998887743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++.+++.. .+ ..+||++||...+....
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 172 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQA-------- 172 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCT--------
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC--------
Confidence 289999999996543 234556778999999999999988742 22 46999999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
....|+.+|...+.+++.++.++ |+++.+++||.|.++..... ..............++ ..
T Consensus 173 ------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r 237 (277)
T 4fc7_A 173 ------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QR 237 (277)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SS
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CC
Confidence 23469999999999999887764 89999999999998632000 0001122222222221 13
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
+...+|+|++++.++... -.|+.+++.+|..++
T Consensus 238 ~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 238 LGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred CcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence 678999999999998643 368899998886443
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=176.75 Aligned_cols=226 Identities=18% Similarity=0.147 Sum_probs=155.3
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...+++|+||||||+|+||+++++.|+++ +++|++.+|...... ...+. ....++.++.+|++|++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~ 76 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVR--EKGVEARSYVCDVTSEEAVIGTVD 76 (262)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--TTTSCEEEEECCTTCHHHHHHHHH
T ss_pred CCcccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHH
Confidence 555577899999999999999999999999 688888888642111 00110 113468899999999999887764
Q ss_pred c-----CCCCEEEEccccC-Cc----CCcCCChHHHHHHHHHHHHHHHHHHHHc----CCCceEEEEecccccCCCCCCc
Q 005818 79 T-----EKIDTIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACKIT----GQIKRFIHVSTDEVYGETDEDA 144 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~ 144 (676)
. .++|+|||+||.. .. +.+.+++...+++|+.++.++++++... + ..+||++||...+.+...
T Consensus 77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-- 153 (262)
T 1zem_A 77 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPN-- 153 (262)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTT--
T ss_pred HHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCC--
Confidence 2 2799999999976 21 2344556788999999999999887642 3 479999999766543321
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC-------------CChHHH-HHHH
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-------------EKLIPK-FILL 207 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~-------------~~~~~~-~~~~ 207 (676)
...|+.+|...+.+.+.++.+ +|+++.+++||.+..+.... ...... ....
T Consensus 154 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T 1zem_A 154 ------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQ 221 (262)
T ss_dssp ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHH
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHH
Confidence 346999999999988887755 48999999999987653100 000001 1111
Q ss_pred HHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 208 AMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
.....+. ..+...+|+|++++.++... -.++.+.+.+|
T Consensus 222 ~~~~~p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 222 MIGSVPM---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp HHHTSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred HHhcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 1111111 13567899999999988643 25677777654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=174.09 Aligned_cols=225 Identities=14% Similarity=0.067 Sum_probs=159.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc---ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN---LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+ .....++.++.+|++|.+++.++++.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAI--KKNGSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHH--HHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 688888888642110 0000 11234688999999999998877643
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... .+..+||++||...+....
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 172 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---------- 172 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC----------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC----------
Confidence 3799999999986532 244566788999999999999998875 2257999999976543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC-------CC--ChHHHHHHHHHC--CCCceee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF-------PE--KLIPKFILLAMK--GKPLPIH 217 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~-------~~--~~~~~~~~~~~~--~~~~~~~ 217 (676)
.+...|+.+|...+.+++.++.+ +|+++.+++||.+.++... +. ............ ..+
T Consensus 173 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 245 (283)
T 1g0o_A 173 ---PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---- 245 (283)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT----
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC----
Confidence 12456999999999999988765 4899999999999876310 00 000111111111 111
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+.+|+|++++.++... ..++.+++.+|.
T Consensus 246 -----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 -----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 113678999999999998653 357889888774
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-19 Score=177.67 Aligned_cols=209 Identities=15% Similarity=0.031 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHH-cCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIG-NYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~- 80 (676)
+++++||||||+|+||+++++.|++ + +++|++++|...... .+.+. ....++.++.+|++|.+++.++++..
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQ--AEGLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHH--HTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHH--hcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999 8 678988888642111 00000 11346889999999999988877432
Q ss_pred ----CCCEEEEccccCCcCCc----CCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCC-c------
Q 005818 81 ----KIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDED-A------ 144 (676)
Q Consensus 81 ----~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~-~------ 144 (676)
++|+|||+||....... .+++...+++|+.++.++++++...- +..+||++||...+...... +
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhc
Confidence 89999999998653221 23456789999999999999998652 12499999997766321100 0
Q ss_pred -CCCCCC-------------------CCCCCCCChhHHHHHHHHHHHHHHHHH-------cCCCEEEEeeCCccCCCCCC
Q 005818 145 -VVGNHE-------------------ASQLLPTNPYSATKAGAEMLVMAYGRS-------YGLPVITTRGNNVYGPNQFP 197 (676)
Q Consensus 145 -~~~~~e-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~l~~~ilR~~~i~G~~~~~ 197 (676)
.....| ..+..|...|+.+|...|.+++.++.+ .++++++++||.|.++....
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 000001 112234578999999999999887765 48999999999998775421
Q ss_pred CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 198 EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+.+.+|+|++++.++..+
T Consensus 238 --------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 --------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp --------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred --------------------------cccCChhHhhhhHhhhhcCc
Confidence 03678999999999999744
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=172.14 Aligned_cols=204 Identities=13% Similarity=0.061 Sum_probs=145.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.................++.++.+|++|++++.+++..
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 68899988864321100000011234689999999999998887743
Q ss_pred CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++.. .+ ..+||++||...+....
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 174 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVA--------- 174 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCT---------
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCC---------
Confidence 379999999998321 234456678999999999999988643 33 57999999977653322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+..+.... .. .. .....++
T Consensus 175 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~--------~~---------~~~~~~~ 230 (262)
T 3rkr_A 175 -----DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG--LS--------AK---------KSALGAI 230 (262)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------CC
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc--cc--------cc---------cccccCC
Confidence 2456999999999999888766 48999999999997654310 00 00 0112467
Q ss_pred eHHHHHHHHHHHHhcCC
Q 005818 228 YCEDVAEAFDTILHKGE 244 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~ 244 (676)
..+|+|++++.++....
T Consensus 231 ~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 231 EPDDIADVVALLATQAD 247 (262)
T ss_dssp CHHHHHHHHHHHHTCCT
T ss_pred CHHHHHHHHHHHhcCcc
Confidence 89999999999997654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=172.68 Aligned_cols=212 Identities=16% Similarity=0.067 Sum_probs=146.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++++||||||+|+||+++++.|+++ |++|++.+|.................++..+.+|++|++++.++++.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 68898888864211100000011134688999999999998887743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||..... .+.+++...+++|+.++.++.+++.. .+ ..+||++||...+.....
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~--------- 149 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPT--------- 149 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTT---------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCC---------
Confidence 2799999999986532 24456678899999999988887643 33 479999999776644322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
...|+.+|...+.+++.++.+. |+++.+++||.|..+.... .... ....... .....++..+
T Consensus 150 -----~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~--~~~~--------~~~~~~~--~~~~~~~~pe 212 (264)
T 3tfo_A 150 -----AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT--ITHE--------ETMAAMD--TYRAIALQPA 212 (264)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------------------CCCHH
T ss_pred -----ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc--ccch--------hHHHHHH--hhhccCCCHH
Confidence 3469999999999999988775 8999999999998764311 1000 0000000 0111256899
Q ss_pred HHHHHHHHHHhcCCC
Q 005818 231 DVAEAFDTILHKGEV 245 (676)
Q Consensus 231 D~a~ai~~~~~~~~~ 245 (676)
|+|++++.+++.+..
T Consensus 213 dvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 213 DIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHhcCCcc
Confidence 999999999987653
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-19 Score=173.68 Aligned_cols=224 Identities=14% Similarity=0.047 Sum_probs=148.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--CCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE--KIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--~~d~ 84 (676)
||+||||||+|+||+++++.|+++ +++|++.+|...... . . +.+|++|+++++++++.. ++|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~-----~-------~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVI-----A-------D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEE-----C-------C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhc-----c-------c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 468999999999999999999999 688988888642111 0 1 568999999999998654 6799
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCC------CC------
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVG------NH------ 149 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~------~~------ 149 (676)
|||+||.... ...+...+++|+.++.++++++... ....+||++||...+.......... ..
T Consensus 66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 1fjh_A 66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence 9999997652 2347889999999999999888631 1257999999988874221110000 00
Q ss_pred --CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 150 --EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 150 --e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+..+..+...|+.+|...+.+++.++.+ +|+++++++||.+.++..... +...........-..+ ..
T Consensus 143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~-------~~ 214 (257)
T 1fjh_A 143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG-LQDPRYGESIAKFVPP-------MG 214 (257)
T ss_dssp HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCS-------TT
T ss_pred hhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh-ccchhHHHHHHhcccc-------cC
Confidence 0011223457999999999999887765 589999999999988754211 0001111111000011 11
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+.+++|+|++++.++..+ ..|+.|++.+|..
T Consensus 215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~ 249 (257)
T 1fjh_A 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249 (257)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 3788999999999998654 2577898888753
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=170.10 Aligned_cols=215 Identities=15% Similarity=0.090 Sum_probs=150.9
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|+..+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+. ....++.++.+|++|++++.++++
T Consensus 1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~~~~~~~~~~~ 76 (247)
T 2jah_A 1 MPSALQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELT--AAGAKVHVLELDVADRQGVDAAVA 76 (247)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHH
Confidence 566677899999999999999999999999 688988888642111 00000 113468999999999999887774
Q ss_pred c-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 79 T-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|+|||+||..... .+.+++...+++|+.++.++++++... .. .+||++||...+.+..
T Consensus 77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 150 (247)
T 2jah_A 77 STVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR----- 150 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC-----
Confidence 3 3799999999976432 234456678999999999999887532 12 6999999976654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+.+.++.+ +|+++++++||.+..+....... ........ . . + +.
T Consensus 151 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~-~--~--~--~~-- 211 (247)
T 2jah_A 151 ---------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYE-Q--R--I--SQ-- 211 (247)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHH-H--H--T--TT--
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHH-h--c--c--cc--
Confidence 2346999999999998887765 48999999999998875321110 11111110 0 0 0 10
Q ss_pred EeeeeHHHHHHHHHHHHhcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+...+|+|++++.++..+.
T Consensus 212 ~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 212 IRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp SCCBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCHHHHHHHHHHHhCCCc
Confidence 115789999999999997643
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-19 Score=180.96 Aligned_cols=210 Identities=11% Similarity=0.027 Sum_probs=156.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
..|+|+||||+|+||++++++|+++|++| .++.+|++|.+++.++++.+ +
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999999999754 45678999999999888776 7
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----C-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----G-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|+|||+||.... |......++....+++|+.++.++++++... + .++|++||...+.
T Consensus 105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------- 169 (302)
T 1w6u_A 105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------- 169 (302)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH---------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc---------------
Confidence 8999999996421 1112234556678999999999998887542 2 4778888876552
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHH---------HHHHHhcCceeccCCCccchh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF---------ITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...|.+++.+... .++++..++|+.++++..+ ...+....+ ...+.+++
T Consensus 170 ---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 242 (302)
T 1w6u_A 170 ---GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP----CGRLGTVE 242 (302)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT----TSSCBCHH
T ss_pred ---CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC----cCCCCCHH
Confidence 1234467999999999999887433 6899999999999887311 112221111 12577899
Q ss_pred hHHHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCC
Q 005818 574 ELLPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDP 614 (676)
Q Consensus 574 D~a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~ 614 (676)
|+|++++.++... .+.+|++.++..+++.++++.+.+..|.
T Consensus 243 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 243 ELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred HHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 9999999998653 2349999999999999888888776553
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=168.91 Aligned_cols=195 Identities=16% Similarity=0.061 Sum_probs=137.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----CC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----EK 81 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~ 81 (676)
+++||||||+|+||+++++.|+++ +++|++++|..... +.+... ..++.++.+|++|++++.++++. .+
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRL--QALAAE--LEGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHH--STTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHH--hhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999 68899888864211 111000 12688999999999998877743 37
Q ss_pred CCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 82 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 82 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
+|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..+||++||...+.+..
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------------ 145 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFK------------ 145 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCT------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCC------------
Confidence 99999999976432 234456688999999998666554 4444 68999999987664322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
+...|+.+|...+.+++.++.+ .|++++++|||.+..+.... . ... ..+++.+
T Consensus 146 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------~------~~~----------~~~~~~~ 201 (234)
T 2ehd_A 146 --GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN------T------PGQ----------AWKLKPE 201 (234)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------------------------------------CCHH
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc------c------ccc----------cCCCCHH
Confidence 2457999999999988877665 48999999999987653210 0 000 0157899
Q ss_pred HHHHHHHHHHhcCC
Q 005818 231 DVAEAFDTILHKGE 244 (676)
Q Consensus 231 D~a~ai~~~~~~~~ 244 (676)
|+|++++.++..+.
T Consensus 202 dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 202 DVAQAVLFALEMPG 215 (234)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999997653
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.1e-19 Score=172.04 Aligned_cols=228 Identities=14% Similarity=0.075 Sum_probs=159.3
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++++||||||+|+||+++++.|+++ +++|+++.+.......+.. .......++..+.+|++|.+.++.++..
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD 80 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHH
Confidence 3566789999999999999999999999 6788775333211110000 0011234688999999999988777632
Q ss_pred ---------CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcC
Q 005818 80 ---------EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 ---------~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++... .+..++|++||...+.+...
T Consensus 81 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--- 157 (255)
T 3icc_A 81 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD--- 157 (255)
T ss_dssp HHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT---
T ss_pred HHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC---
Confidence 2499999999986532 233445678899999999999998753 11358999999776543322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.+|...+.+++.++.++ |+++.+++||.+..+......--..+........+
T Consensus 158 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------- 217 (255)
T 3icc_A 158 -----------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA--------- 217 (255)
T ss_dssp -----------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------
T ss_pred -----------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------
Confidence 3469999999999999887764 89999999999988765321111111222222221
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+.+++|++++++.++... ..|+.+++.+|.
T Consensus 218 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 218 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 124678999999999988543 368899998875
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-19 Score=174.47 Aligned_cols=229 Identities=13% Similarity=0.002 Sum_probs=160.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+.......++.++.+|++|++++.++++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 55789999999999999999999999 688998888642111 00000001233589999999999998877743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++... ....+||++||...+.+..
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP--------- 154 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC---------
Confidence 379999999998653 3344566789999999999999887532 1246899999976654332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC------C--ChHHHHHHHHHCCCCceeecC
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP------E--KLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~------~--~~~~~~~~~~~~~~~~~~~~~ 219 (676)
....|+.+|...+.+++.++.++ |+++.+++||.+.++.... . .-...+..........++
T Consensus 155 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--- 226 (265)
T 3lf2_A 155 -----HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL--- 226 (265)
T ss_dssp -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT---
T ss_pred -----CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc---
Confidence 23469999999999999887764 8999999999998763200 0 001111111111111111
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+...+|+|++++.++... -.|+.+++.+|..
T Consensus 227 ----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 227 ----GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp ----CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred ----CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 14778999999999998643 2678899988753
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=171.66 Aligned_cols=221 Identities=17% Similarity=0.107 Sum_probs=153.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++||||||+|+||+++++.|+++ +++|++.++...... +.+. ......++.++++|++|+++++++++.
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAA-EEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHH-HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999 678877644321110 0000 011245789999999999998888743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|++||+||..... .+.+++...+++|+.++.++++++...- +-.++|++||...+....
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 170 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------- 170 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-------------
Confidence 2899999999986532 2334566788999999999998876531 125899999976654322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
....|+.+|...+.+++.++.++ |+++.++.||.|..+..... .............+ ...+...+|
T Consensus 171 -~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p---------~~r~~~ped 239 (267)
T 3u5t_A 171 -SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLAP---------LERLGTPQD 239 (267)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSST---------TCSCBCHHH
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcCC---------CCCCcCHHH
Confidence 23469999999999999988875 79999999999987753110 11111122222221 124778999
Q ss_pred HHHHHHHHHhcCC---CCceEEEcCC
Q 005818 232 VAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 232 ~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+|++++.++.... .|+.+++.+|
T Consensus 240 vA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 240 IAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHHhCccccCccCCEEEeCCC
Confidence 9999999986533 5778888776
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=173.41 Aligned_cols=224 Identities=13% Similarity=0.085 Sum_probs=159.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCC-CcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYP-EYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~- 80 (676)
+++++||||||+|+||+++++.|+++|+ ..+|++.+|...... ...+.......++.++.+|++|+++++++++..
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3468999999999999999999999953 248888888642211 000000111346889999999999999888543
Q ss_pred ----CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 81 ----KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 81 ----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
++|+|||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~------ 183 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYP------ 183 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT------
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCC------
Confidence 79999999997642 23455677899999999999999873 333 57999999976653322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC--CCChHHHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
....|+.+|...+.+.+.++.+ +|+++.+++||.|..+... ........ .......
T Consensus 184 --------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~---------- 244 (287)
T 3rku_A 184 --------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQA-KNVYKDT---------- 244 (287)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHH-HHHHTTS----------
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHH-HHhhccc----------
Confidence 2356999999999999998887 4899999999999876310 00011111 1111111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
.++..+|+|++++.++..+. .++++.+.++++
T Consensus 245 --~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 245 --TPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp --CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred --CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 23478999999999998654 366788877654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-19 Score=178.35 Aligned_cols=200 Identities=13% Similarity=-0.010 Sum_probs=148.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|....... ..+ .....++.++.+|++|++++.++++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHH--HhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889998886421110 000 01134789999999999998887742
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------- 175 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP-------- 175 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH--------
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC--------
Confidence 2799999999986532 2334556789999999888877764 333 67999999987764322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc------CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY------GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...|.+++.++.+. |+++++++||.+.++.... .. . ..
T Consensus 176 ------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-~~-------------~-------~~ 228 (272)
T 1yb1_A 176 ------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-PS-------------T-------SL 228 (272)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-TH-------------H-------HH
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-cc-------------c-------cc
Confidence 13469999999999999887764 7999999999998875321 00 0 01
Q ss_pred EeeeeHHHHHHHHHHHHhcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+++.+|+|++++.+++.+.
T Consensus 229 ~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 229 GPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp CCCCCHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHHHHHcCC
Confidence 247889999999999998654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-19 Score=172.64 Aligned_cols=199 Identities=16% Similarity=0.114 Sum_probs=146.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 87 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILV 87 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 45779999999999888755 679999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
|+||...... .....++.+..+++|+.|+.++++++... +.++|++||...+. +.
T Consensus 88 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~ 149 (259)
T 4e6p_A 88 NNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR------------------GE 149 (259)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------CC
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc------------------CC
Confidence 9999752111 12233455677899999999999988653 35788988876552 12
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H---HHHHHhcC--ce------eccCCCccchhh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F---ITKISRYN--KV------VNIPNSMTILDE 574 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~---~~~~~~~~--~~------~~~~~~~~~v~D 574 (676)
.+...|+.||...|.+.+.+.. ..++++..++|+.+++|.. . +....... .. ......+.+++|
T Consensus 150 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d 229 (259)
T 4e6p_A 150 ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAED 229 (259)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHH
Confidence 3346799999999999988743 3489999999999998841 1 11111100 00 011236889999
Q ss_pred HHHHHHHHHhcC----CCceeEccCCCccc
Q 005818 575 LLPISVEMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 575 ~a~~~~~~~~~~----~~g~yn~~~~~~~s 600 (676)
+|++++.++... .+.+|++.++..+|
T Consensus 230 va~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 230 LTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp HHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 999999988643 23599999987654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-17 Score=156.83 Aligned_cols=220 Identities=14% Similarity=0.129 Sum_probs=160.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~ 82 (676)
++++|++|||||++.||+++++.|+++ |.+|++.+|..... ......++..+++|++|+++++++++.. ++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGV------HAPRHPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTST------TSCCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHH------hhhhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 457899999999999999999999999 78899998864221 1223457999999999999999988654 69
Q ss_pred CEEEEccccCCc--CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 83 DTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 83 d~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
|++||+||...+ ..+.+++...+++|+.++..+.+++..+ .+-.++|++||...+-+... ..
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~--------------~~ 145 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD--------------RP 145 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS--------------CH
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC--------------CH
Confidence 999999998653 2345567889999999999888876532 01268999999765433222 34
Q ss_pred hhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
.|+.+|.....+.+.++.++ |+++..+.||.|..|.......-....+......++. -+-..+|+|.+
T Consensus 146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~ 216 (242)
T 4b79_A 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASA 216 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence 69999999999998877764 8999999999998775321111122333333333221 25567999999
Q ss_pred HHHHHhcC---CCCceEEEcCC
Q 005818 236 FDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 236 i~~~~~~~---~~~~~y~i~~~ 254 (676)
+++++... -.|+.+.+.+|
T Consensus 217 v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 217 AAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhcCccCceEEECcc
Confidence 99988543 26788888776
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.2e-19 Score=171.25 Aligned_cols=220 Identities=12% Similarity=0.125 Sum_probs=155.0
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCCCCCCCeEEEEecC--CCHHHHHHHHcc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPSRLSPNFKFIKGDV--ASADLVHFILLT 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~v~~v~~Dl--~d~~~~~~~~~~ 79 (676)
.+++|+||||||+|+||+++++.|+++ +++|++.+|....... ..+. .....++.++.+|+ +|.+++.++++.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHIN-EETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hhcCCCceEEEEecccCCHHHHHHHHHH
Confidence 356789999999999999999999999 6789998886422110 0000 00123678999999 999888777643
Q ss_pred -----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 80 -----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 80 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
.++|++||+||.... +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+.+..
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---- 160 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA---- 160 (252)
T ss_dssp HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT----
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC----
Confidence 279999999997532 23444566889999999999999883 333 57999999976653322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
+...|+.+|...+.+++.++.+++ +++..+.||.+..+. ......... .
T Consensus 161 ----------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~----------~~~~~~~~~---------~ 211 (252)
T 3f1l_A 161 ----------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM----------RASAFPTED---------P 211 (252)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH----------HHHHCTTCC---------G
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch----------hhhhCCccc---------h
Confidence 234699999999999999888764 888999999886531 111111111 1
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHH
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERRVI 260 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s~~ 260 (676)
..+...+|++.+++.++... ..|+.+++.+|...++.
T Consensus 212 ~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 212 QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 13667899999999998653 36789999988766543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-18 Score=171.94 Aligned_cols=222 Identities=14% Similarity=0.085 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC-cccc--ccCCCCCCCCCCeEEEEecCCC----HHHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD-YCSN--LKNLNPSRLSPNFKFIKGDVAS----ADLVHFIL 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~-~~~~--~~~~~~~~~~~~v~~v~~Dl~d----~~~~~~~~ 77 (676)
|+.++||||||+|+||+++++.|+++ +++|++.+|.. .... ...+. .....++.++.+|++| ++++.+++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELN-KERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHH-HHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHH-hhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 55789999999999999999999999 68898888864 2110 00000 0113468999999999 88888776
Q ss_pred cc-----CCCCEEEEccccCCcC--------------CcCCChHHHHHHHHHHHHHHHHHHHHcC---C------CceEE
Q 005818 78 LT-----EKIDTIMHFAAQTHVD--------------NSFGNSFEFTKNNIYGTHVLLEACKITG---Q------IKRFI 129 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~~--------------~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~------~~~~v 129 (676)
+. .++|+|||+||..... .+.+++...+++|+.++.++.+++...- . ..+||
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 42 3799999999976422 2233456788999999999998876432 1 35899
Q ss_pred EEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHH
Q 005818 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFIL 206 (676)
Q Consensus 130 ~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~ 206 (676)
++||...+.... +...|+.+|...+.+.+.++.++ |+++.+++||.|+++. . . . +....
T Consensus 178 ~isS~~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~ 239 (288)
T 2x9g_A 178 NLCDAMVDQPCM--------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKD 239 (288)
T ss_dssp EECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHH
T ss_pred EEecccccCCCC--------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHH
Confidence 999977664322 24569999999999998877764 8999999999999987 2 1 1 12222
Q ss_pred HHHCCCCceeecCCCceEee-eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 207 LAMKGKPLPIHGDGSNVRSY-LYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
......+. + .+ ...+|+|++++.++... ..++.+++.+|..
T Consensus 240 ~~~~~~p~-----~----r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 240 KWRRKVPL-----G----RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp HHHHTCTT-----T----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHhhCCC-----C----CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 22222111 1 24 68899999999998642 2577888887743
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=175.50 Aligned_cols=223 Identities=13% Similarity=0.053 Sum_probs=158.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEc-CCCcccc--ccCCCCCCCCCCeEEEEecCCCHH----------
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSN--LKNLNPSRLSPNFKFIKGDVASAD---------- 71 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~-r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~---------- 71 (676)
+++++||||||+|+||+++++.|+++ +++|++.+ |...... ...+. .....++.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLN-ARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHH-HHSTTCEEEEECCCSSSCBCC-------
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHH-hhcCCeEEEEEeeCCCchhccccccccc
Confidence 44689999999999999999999999 68888888 6532110 00000 011346899999999998
Q ss_pred -------HHHHHHcc-----CCCCEEEEccccCCcC----Cc--------------CCChHHHHHHHHHHHHHHHHHHHH
Q 005818 72 -------LVHFILLT-----EKIDTIMHFAAQTHVD----NS--------------FGNSFEFTKNNIYGTHVLLEACKI 121 (676)
Q Consensus 72 -------~~~~~~~~-----~~~d~Vih~a~~~~~~----~~--------------~~~~~~~~~~nv~~~~~ll~a~~~ 121 (676)
++.++++. .++|+|||+||..... .+ .+++...+++|+.++.++++++..
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 200 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 200 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777643 2899999999976432 12 344567889999999999988763
Q ss_pred c---CC------CceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCC
Q 005818 122 T---GQ------IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNN 189 (676)
Q Consensus 122 ~---~~------~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~ 189 (676)
. .. ..+||++||...+.... +...|+.+|...+.+++.++.++ |+++.+++||.
T Consensus 201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~--------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~ 266 (328)
T 2qhx_A 201 RVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 266 (328)
T ss_dssp HHHHSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHhcCCcCCCCCcEEEEECchhhccCCC--------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence 2 11 36999999977654322 23469999999999999887764 89999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 190 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
|..+. . .+ +..........++. . .+...+|+|++++.++... ..++.+++.+|..
T Consensus 267 v~T~~-~--~~-~~~~~~~~~~~p~~------~--r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 267 SVLVD-D--MP-PAVWEGHRSKVPLY------Q--RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp BSCCC-C--SC-HHHHHHHHTTCTTT------T--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ccCCc-c--cc-HHHHHHHHhhCCCC------C--CCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 99886 2 22 33333333322211 0 2668899999999998642 2578899988753
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=171.99 Aligned_cols=209 Identities=16% Similarity=0.131 Sum_probs=143.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE---- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~---- 80 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ... .....++.++++|++|++++.++++..
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~--~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQ--ETA-AEIGDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHH-HHHTSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHH--HHH-HHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34688999999999999999999999 688999888642111 100 001246889999999999998887432
Q ss_pred -CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc----C-CCceEEEEecccccCCCCCCcCCCCC
Q 005818 81 -KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT----G-QIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 81 -~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
++|+|||+||.... +.+.+++...+++|+.++.++.+++... + +-.+||++||...+.+..
T Consensus 101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-------- 172 (272)
T 4dyv_A 101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP-------- 172 (272)
T ss_dssp SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT--------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC--------
Confidence 89999999998543 2344566789999999999988877542 1 135899999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|..+... .+..... ... . ......+
T Consensus 173 ------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~-~~~--~-------~~~~~~~ 234 (272)
T 4dyv_A 173 ------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ--KMKAGVP-QAD--L-------SIKVEPV 234 (272)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh--hhcccch-hhh--h-------cccccCC
Confidence 2456999999999999988776 4899999999999877531 1111100 000 0 0112247
Q ss_pred eeHHHHHHHHHHHHhcCC
Q 005818 227 LYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~ 244 (676)
.+++|+|++++.++..+.
T Consensus 235 ~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 235 MDVAHVASAVVYMASLPL 252 (272)
T ss_dssp -CHHHHHHHHHHHHHSCT
T ss_pred CCHHHHHHHHHHHhCCCC
Confidence 899999999999998765
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=168.31 Aligned_cols=202 Identities=12% Similarity=0.061 Sum_probs=145.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++++||||||+|+||+++++.|+++ +++|++.+|..... +..... ...++.++.+|++|+++++++++.
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRL--QQQELL-LGNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHH-HGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHH-hcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 68899998864221 111000 022589999999999998887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++... .+-.++|++||...+.+...
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 144 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN----------- 144 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS-----------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC-----------
Confidence 379999999998643 2345567789999999999999887532 11139999999765543221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 230 (676)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+.... . .. . ....+...+
T Consensus 145 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~----~~-----~---------~~~~~~~pe 201 (235)
T 3l6e_A 145 ---ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN--T----DH-----V---------DPSGFMTPE 201 (235)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------------CBCHH
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc--c----CC-----C---------CCcCCCCHH
Confidence 3469999999999999988764 7999999999997664311 0 00 0 011478899
Q ss_pred HHHHHHHHHHhcCCC
Q 005818 231 DVAEAFDTILHKGEV 245 (676)
Q Consensus 231 D~a~ai~~~~~~~~~ 245 (676)
|+|++++.++.++..
T Consensus 202 dvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 202 DAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999986543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.2e-19 Score=173.24 Aligned_cols=224 Identities=13% Similarity=0.041 Sum_probs=157.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----C
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----E 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~ 80 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|.................++..+.+|++|.+++.++++. .
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999 67898888864321100000011245789999999999988877632 3
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+||..... .+.+++...+++|+.++.++++++. +.+ ..+||++||...+...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~------------ 175 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK------------ 175 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC------------
Confidence 899999999976432 3445667889999999999998873 333 5799999997766422
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCC-CceeecCCCceEeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGK-PLPIHGDGSNVRSYL 227 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~v 227 (676)
.+...|+.+|...+.+++.++.++ |+++.+++||.+..+...... ..+.......... ++ ..+.
T Consensus 176 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~ 244 (275)
T 4imr_A 176 --SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRAG 244 (275)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSCB
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCCc
Confidence 123469999999999999888775 899999999999876321000 0001111111110 11 1256
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+|+|++++.++... -.|+.+++.+|
T Consensus 245 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 245 RPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred CHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 6799999999998653 25788988776
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=174.03 Aligned_cols=224 Identities=17% Similarity=0.193 Sum_probs=159.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----CC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----EK 81 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~~ 81 (676)
++++||||||+|+||+++++.|+++ +++|++.+|...... .+. .....++.++++|++|.+++.++++. .+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~--~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGK--ALA-DELGNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHH-HHHCTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHH--HHH-HHhCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999 688999988642211 110 01135789999999999998887743 37
Q ss_pred CCEEEEc-cccCCcC---------CcCCChHHHHHHHHHHHHHHHHHHHHc---------CCCceEEEEecccccCCCCC
Q 005818 82 IDTIMHF-AAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKIT---------GQIKRFIHVSTDEVYGETDE 142 (676)
Q Consensus 82 ~d~Vih~-a~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~~v~~SS~~vyg~~~~ 142 (676)
+|+|||+ |+..... .+.+++...+++|+.++.++++++... +.-.+||++||...+....
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 182 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI- 182 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT-
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC-
Confidence 8999999 4443221 222346789999999999999887632 1135899999987764332
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecC
Q 005818 143 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGD 219 (676)
Q Consensus 143 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (676)
+...|+.+|...+.+++.++.++ |+++.+++||.|..+... .+............+..
T Consensus 183 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~---- 243 (281)
T 3ppi_A 183 -------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME--SVGEEALAKFAANIPFP---- 243 (281)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TTCHHHHHHHHHTCCSS----
T ss_pred -------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh--cccHHHHHHHHhcCCCC----
Confidence 24569999999999988877764 899999999999775321 11122222332222210
Q ss_pred CCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKERR 258 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s 258 (676)
..+.+.+|+|++++.++.... .|+.+++.+|..++
T Consensus 244 ----~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 244 ----KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp ----SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred ----CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 247889999999999997643 67889998886543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=167.63 Aligned_cols=193 Identities=12% Similarity=0.068 Sum_probs=143.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~ 442 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|+|||+||.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~ 86 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAV 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence 3689999999999999999999999865 34578999999999998754 57999999996
Q ss_pred cCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 443 TGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 443 ~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
... +......++....+++|+.++.++++++.+. + .++|++||...+. +..+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~~~~~ 148 (244)
T 3d3w_A 87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------------AVTNHSV 148 (244)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBHH
T ss_pred CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc------------------CCCCCch
Confidence 521 1111223455678999999999999988653 3 4678888865542 1234478
Q ss_pred hhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHH--------HHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 516 YSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
|+.||...|.+++.+.+. .++++.+++|+.++++..- +..+.... ....+++++|+|++++.++.
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~ 224 (244)
T 3d3w_A 149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI----PLGKFAEVEHVVNAILFLLS 224 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC----TTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC----CCCCCcCHHHHHHHHHHHcC
Confidence 999999999999886432 5799999999999987411 11221111 12368899999999999997
Q ss_pred cC---CC-ceeEccCCCc
Q 005818 585 RN---LS-GIWNFTNPGV 598 (676)
Q Consensus 585 ~~---~~-g~yn~~~~~~ 598 (676)
.. .. .+|++.++..
T Consensus 225 ~~~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 225 DRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred ccccCCCCCEEEECCCcc
Confidence 54 23 4899988754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=167.12 Aligned_cols=196 Identities=14% Similarity=0.130 Sum_probs=144.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------eeccccCCChHHHHHHhhcc----CCCEEEECccccCCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------EYGKGRLENRSQLLADIQNV----KPTHVFNAAGVTGRPN 447 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~a~~~~~~~ 447 (676)
+|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+|||+||......
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~ 81 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEK 81 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCccc
Confidence 3689999999999999999999999876 34678999999999988743 5699999999652111
Q ss_pred cc-hhcc----chhhHHhhhhhhHHHHHHHHHHc----C-------CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 448 VD-WCET----HKPETIRTNVVGTLTLADVCREN----G-------LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 448 ~~-~~~~----~~~~~~~~Nv~g~~~ll~a~~~~----~-------~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
.. ...+ +....+++|+.++.++++++.+. + .++|++||...+.. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~ 143 (242)
T 1uay_A 82 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------------------QI 143 (242)
T ss_dssp SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------------------CT
T ss_pred ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC------------------CC
Confidence 11 1111 55678899999999999998764 1 17888888776631 13
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+...|+.||...|.+++.+.. ..++++.+++|+.++++.. +...+.... .....+.+++|+|++++.+
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l 220 (242)
T 1uay_A 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQV---PFPPRLGRPEEYAALVLHI 220 (242)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTC---CSSCSCCCHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhC---CCcccCCCHHHHHHHHHHH
Confidence 347899999999999887643 3489999999999998841 122222211 1114578999999999999
Q ss_pred HhcC-C-CceeEccCCCccc
Q 005818 583 AKRN-L-SGIWNFTNPGVVS 600 (676)
Q Consensus 583 ~~~~-~-~g~yn~~~~~~~s 600 (676)
+... . +.+|++.++..++
T Consensus 221 ~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 221 LENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp HHCTTCCSCEEEESTTCCCC
T ss_pred hcCCCCCCcEEEEcCCeecC
Confidence 9764 2 3489998876543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=172.11 Aligned_cols=210 Identities=13% Similarity=0.113 Sum_probs=158.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHG 90 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999754 45678999999999888765
Q ss_pred CCCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 KPTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|+|||+||.... +..+...++....+++|+.|+.++++++... +.++|++||...+.
T Consensus 91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 156 (281)
T 3svt_A 91 RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-------------- 156 (281)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS--------------
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC--------------
Confidence 78999999996311 1122233455678999999999999988653 24788888876552
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...|.+++.+.. ..++++..++|+.++.+.. +...+....+ ...+.+++
T Consensus 157 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p----~~r~~~~~ 228 (281)
T 3svt_A 157 ----THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP----LPRQGEVE 228 (281)
T ss_dssp ----CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS----SSSCBCHH
T ss_pred ----CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC----CCCCCCHH
Confidence 123347899999999999988643 3469999999999998741 1112221111 13567899
Q ss_pred hHHHHHHHHHhcC----CCceeEccCCCccc-HHHHHHHHHhhcCCC
Q 005818 574 ELLPISVEMAKRN----LSGIWNFTNPGVVS-HNEILEMYKAYIDPG 615 (676)
Q Consensus 574 D~a~~~~~~~~~~----~~g~yn~~~~~~~s-~~e~~~~i~~~~g~~ 615 (676)
|+|++++.++... .+.+|++.++...+ ..++++.+.+.+|.+
T Consensus 229 dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 229 DVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred HHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 9999999998754 23599999988877 778888888888764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=167.15 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=145.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-----CCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~ 443 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+|||+||..
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 3589999999999999999999999865 56789999999999888754 679999999975
Q ss_pred CCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 444 GRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
.... .+...++.+..+++|+.|+.++++++. +.+ .++|++||+.++.. .+..+...|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~~~~~Y~ 171 (260)
T 3un1_A 108 LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP----------------MVGMPSALAS 171 (260)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC----------------BTTCCCHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC----------------CCCCccHHHH
Confidence 2111 122344556788999999999999873 344 47888888754321 1223457899
Q ss_pred hhHHHHHHHHHHccCe---EEEEeeecccCCCCChH---HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC--CCc
Q 005818 518 KTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPR---NFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN--LSG 589 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g 589 (676)
.||...+.+.+.+... .++++..++|+.+++|. .....+.... ....+..++|+|++++.+.+.. .+.
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~----p~~r~~~~~dva~av~~L~~~~~itG~ 247 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLH----PVGRMGEIRDVVDAVLYLEHAGFITGE 247 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTS----TTSSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccC----CCCCCcCHHHHHHHHHHhcccCCCCCc
Confidence 9999999999886433 48999999999999874 1222222211 1235778999999999986554 335
Q ss_pred eeEccCCCccc
Q 005818 590 IWNFTNPGVVS 600 (676)
Q Consensus 590 ~yn~~~~~~~s 600 (676)
++++.+|...+
T Consensus 248 ~i~vdGG~~~~ 258 (260)
T 3un1_A 248 ILHVDGGQNAG 258 (260)
T ss_dssp EEEESTTGGGC
T ss_pred EEEECCCeecc
Confidence 99999886543
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=166.20 Aligned_cols=213 Identities=18% Similarity=0.113 Sum_probs=150.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC---
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE--- 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--- 80 (676)
++++||||||+|+||+++++.|+++ +++|++.+|...... ...+. .....++.++.+|++|++++.++++..
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELM-QEQGVEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999 688888888642111 00000 012457899999999999999887432
Q ss_pred --CCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 --KIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+||...... +.+++...+++|+.++.++++++... .+..++|++||...+....
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 146 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP----------- 146 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT-----------
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC-----------
Confidence 8999999999865432 45567789999999999999988542 0125777777754432221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
....|+.+|...+.+++.+... .++++.+++||.+..+...... .. .....++..+|
T Consensus 147 ---~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-----------~~--------~~~~~~~~p~d 204 (235)
T 3l77_A 147 ---YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP-----------GK--------PKEKGYLKPDE 204 (235)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS-----------CC--------CGGGTCBCHHH
T ss_pred ---CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC-----------Cc--------ccccCCCCHHH
Confidence 1346999999999999987544 3899999999999776432100 00 01114678999
Q ss_pred HHHHHHHHHhcCC---CCceEEEcCC
Q 005818 232 VAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 232 ~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
+|++++.+++.+. .+++....++
T Consensus 205 va~~v~~l~~~~~~~~~~~~~~~~~~ 230 (235)
T 3l77_A 205 IAEAVRCLLKLPKDVRVEELMLRSVY 230 (235)
T ss_dssp HHHHHHHHHTSCTTCCCCEEEECCTT
T ss_pred HHHHHHHHHcCCCCCccceEEEeecc
Confidence 9999999998765 3444444433
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.6e-18 Score=163.71 Aligned_cols=215 Identities=17% Similarity=0.081 Sum_probs=148.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-----CC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-----KI 82 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-----~~ 82 (676)
|+||||||+|+||+++++.|+++ +++|++.+|..... +.+.. ....++.++.+|++|++++.++++.. ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERL--QELKD-ELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHH-HHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHHH-HhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 57999999999999999999999 68899888864211 11100 01246889999999999999887532 79
Q ss_pred CEEEEccccCC-----cCCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 83 DTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 83 d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
|++||+||... .+.+.+++...+++|+.++.++.+++. +.+ ..+||++||...+.+..
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------------ 142 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA------------ 142 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCC------------
Confidence 99999999753 123445667899999999999988875 333 57999999977653322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccC-CCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYG-PNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+...|+.+|...+.+++.++.+. |+++.+++||.|.| +... ..+... .... ... . ....++..
T Consensus 143 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~-~~~~~~--~~~~--~~~--~----~~~~~~~p 209 (248)
T 3asu_A 143 --GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-VRFKGD--DGKA--EKT--Y----QNTVALTP 209 (248)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCH
T ss_pred --CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh-hcccCc--hHHH--HHH--H----hccCCCCH
Confidence 24569999999999999887764 89999999999984 4321 000000 0000 000 0 01134689
Q ss_pred HHHHHHHHHHHhcCC--CCceEEEcC
Q 005818 230 EDVAEAFDTILHKGE--VGHVYNIGT 253 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~--~~~~y~i~~ 253 (676)
+|+|++++.++..+. .++.+.+..
T Consensus 210 ~dvA~~v~~l~s~~~~~~g~~i~v~~ 235 (248)
T 3asu_A 210 EDVSEAVWWVSTLPAHVNINTLEMMP 235 (248)
T ss_dssp HHHHHHHHHHHHSCTTCCCCEEEECC
T ss_pred HHHHHHHHHHhcCCccceeeEEEEcc
Confidence 999999999987543 345565544
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=163.92 Aligned_cols=226 Identities=13% Similarity=0.033 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
+++++||||||+ |+||.++++.|+++ +++|+++++.......+.... .....++.++++|++|+++++++++.
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 456899999999 99999999999999 788888877643210000000 01145789999999999998887743
Q ss_pred ----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHH----HHcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 168 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANF------ 168 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCS------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCC------
Confidence 2799999999987532 244566789999999999999887 3333 46999999976543321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
..+...|+.+|...+.+++.++.+++ +++..+.||.+..+... ..............+ ...
T Consensus 169 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~---------~~r 231 (267)
T 3gdg_A 169 ------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD--FVPKETQQLWHSMIP---------MGR 231 (267)
T ss_dssp ------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG--GSCHHHHHHHHTTST---------TSS
T ss_pred ------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh--hCCHHHHHHHHhcCC---------CCC
Confidence 11245799999999999999888764 78899999999876542 111223333333222 124
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
+.+.+|++++++.++.... .|+.+++.+|..
T Consensus 232 ~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 232 DGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp CEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred CcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 6788999999999986532 578899988753
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-19 Score=170.15 Aligned_cols=187 Identities=10% Similarity=0.041 Sum_probs=124.4
Q ss_pred CCCCCCccEEEEEcCCcchhHHHHHHHHHcC-Cce------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 378 SSRQKPFLKFLIYGRTGWIGGLLSKICEKKG-IPF------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 378 ~~~~~~~~~vlitG~~G~iG~~l~~~L~~~g-~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
...+++||+|+||||+|+||++|++.|+++| ++| .++.+|++|++++.++++++ |+|||
T Consensus 17 ~~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vv~ 94 (236)
T 3qvo_A 17 LYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQ--DIVYA 94 (236)
T ss_dssp -----CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred eeecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCC--CEEEE
Confidence 3345567899999999999999999999999 654 56789999999999999987 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
+|+.. .. ...+.++++++++.++ ++|++||..+|+.....+ . ...+..+ ..+.
T Consensus 95 ~a~~~---~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~----~-~~~~~~~----~~~~ 148 (236)
T 3qvo_A 95 NLTGE---DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF----V-EWNNAVI----GEPL 148 (236)
T ss_dssp ECCST---TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC-------------------------CGGG
T ss_pred cCCCC---ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCccc----c-cchhhcc----cchH
Confidence 99833 10 1346789999999886 688888888886532211 0 0111112 2234
Q ss_pred hhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC---CceeEcc
Q 005818 518 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL---SGIWNFT 594 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~---~g~yn~~ 594 (676)
..|..+|+.++ ..+++++++||+.++++...- .............+++++|+|++++.++..+. +++|+++
T Consensus 149 ~~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~--~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~ 222 (236)
T 3qvo_A 149 KPFRRAADAIE----ASGLEYTILRPAWLTDEDIID--YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGIN 222 (236)
T ss_dssp HHHHHHHHHHH----TSCSEEEEEEECEEECCSCCC--CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEE
T ss_pred HHHHHHHHHHH----HCCCCEEEEeCCcccCCCCcc--eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEec
Confidence 45555666664 357999999999988752100 00000001112368999999999999998764 4699999
Q ss_pred CCCc
Q 005818 595 NPGV 598 (676)
Q Consensus 595 ~~~~ 598 (676)
+++.
T Consensus 223 ~~~~ 226 (236)
T 3qvo_A 223 QPGT 226 (236)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8754
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=171.40 Aligned_cols=207 Identities=11% Similarity=0.073 Sum_probs=142.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG 85 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999765 23568999999999888744
Q ss_pred CCCEEEECccccCCCC-cch----hccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCee-eecCCCCCCCCCC
Q 005818 432 KPTHVFNAAGVTGRPN-VDW----CETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCI-FEYDAKHPEGTGI 501 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v-~~~~~~~~~~~~~ 501 (676)
++|+|||+||...... ... ..++.+..+++|+.|+.++++++... +.++|++||... +.
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------- 154 (278)
T 1spx_A 86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH----------- 154 (278)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS-----------
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc-----------
Confidence 5799999999652111 111 33455678999999999999988764 568888888765 42
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H-------------HHHHHhcCcee
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F-------------ITKISRYNKVV 563 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~-------------~~~~~~~~~~~ 563 (676)
+..+...|+.||...|.+.+.+.. ..++++..++|+.++++.. . ...+... .
T Consensus 155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 224 (278)
T 1spx_A 155 -------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC---V 224 (278)
T ss_dssp -------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH---C
T ss_pred -------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc---C
Confidence 112346799999999999988642 3589999999999987631 1 1111111 1
Q ss_pred ccCCCccchhhHHHHHHHHHhcC----C-CceeEccCCCcccHHHHHHHHHhhc
Q 005818 564 NIPNSMTILDELLPISVEMAKRN----L-SGIWNFTNPGVVSHNEILEMYKAYI 612 (676)
Q Consensus 564 ~~~~~~~~v~D~a~~~~~~~~~~----~-~g~yn~~~~~~~s~~e~~~~i~~~~ 612 (676)
....+.+++|+|++++.++..+ . +.+|++.++...++.++++.+.+.+
T Consensus 225 -p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 225 -PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp -TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred -CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 1135789999999999988643 2 3489999999999999999988753
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-18 Score=171.40 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=148.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+. ......+.++++|++|++++.++++.
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIG-GRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH-hcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 688999988642111 00000 00122358999999999998887743
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc----C-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT----G-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||.... +.+.+++...+++|+.++.++.+++... + ...+||++||...+....
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------ 181 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP------ 181 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC------
Confidence 279999999997543 2345566789999999999888876532 1 135899999976653322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.|..+... . .... ...........
T Consensus 182 --------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------~----~~~~--~~~~~~~~~~~ 241 (281)
T 4dry_A 182 --------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA------R----MSTG--VLQANGEVAAE 241 (281)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------------CE--EECTTSCEEEC
T ss_pred --------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh------h----hcch--hhhhhhccccc
Confidence 2456999999999999988766 4899999999999876431 0 0000 00000001112
Q ss_pred eeeeHHHHHHHHHHHHhcCCCCceEE
Q 005818 225 SYLYCEDVAEAFDTILHKGEVGHVYN 250 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~~~~~y~ 250 (676)
.++..+|+|++++.++..+....+.+
T Consensus 242 ~~~~pedvA~~v~fL~s~~~~~~i~~ 267 (281)
T 4dry_A 242 PTIPIEHIAEAVVYMASLPLSANVLT 267 (281)
T ss_dssp CCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCccCcccc
Confidence 47789999999999998876544433
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-18 Score=169.51 Aligned_cols=212 Identities=18% Similarity=0.130 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... ...+.......++.++.+|++|++++.++++.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 688999888642111 00000011124578899999999998887742
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHH----HHHHHHHHHHcCCC--ceEEEEecccccCCCCCCcCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYG----THVLLEACKITGQI--KRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~----~~~ll~a~~~~~~~--~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|+|||+||..... .+.+++...+++|+.+ +.+++.++++.+ . .+||++||...+....
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~------ 180 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLP------ 180 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCS------
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCC------
Confidence 2799999999976432 2334566789999999 666677777655 4 7999999987764211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCC--CCChHHHHHHHHHCCCCceeecCC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
..+...|+.+|...+.+++.++.+ .++++++++||.|.++... .......+. ..
T Consensus 181 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~------------ 241 (279)
T 1xg5_A 181 ------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA-AT------------ 241 (279)
T ss_dssp ------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH-HH------------
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHh-hh------------
Confidence 122456999999999988877654 4799999999999876310 000000000 00
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
.....+++++|+|++++.++..+.
T Consensus 242 ~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 242 YEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp HC---CBCHHHHHHHHHHHHHSCT
T ss_pred cccccCCCHHHHHHHHHHHhcCCc
Confidence 011247899999999999998654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.9e-18 Score=166.39 Aligned_cols=208 Identities=16% Similarity=0.129 Sum_probs=146.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCC-CCCCeEEEEecCCCHHHHHHHH
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSR-LSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~-~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
|+-.++++++|||||+|+||+++++.|+++ +++|++.+|...... .+.+.... ...++.++++|++|++++.+++
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 78 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEI 78 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHH
Confidence 554567889999999999999999999999 678999888642211 00000000 1256889999999999988877
Q ss_pred cc-----CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 78 LT-----EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 78 ~~-----~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
+. .++|++||+||.... ..+.+++...+++|+.++.++.+++. +.+ ..++|++||...+.+.
T Consensus 79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----- 152 (250)
T 3nyw_A 79 KDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF----- 152 (250)
T ss_dssp HHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC------------
T ss_pred HHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC-----
Confidence 43 379999999998643 23344566889999999999998873 333 5799999996554321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
.+...|+.+|...+.+++.++.++ |+++.+++||.+..+. .+.. ....+
T Consensus 153 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~----------~~~~--~~~~~------- 204 (250)
T 3nyw_A 153 ---------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM----------AKKA--GTPFK------- 204 (250)
T ss_dssp ---------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH----------HHHT--TCCSC-------
T ss_pred ---------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch----------hhhc--CCCcc-------
Confidence 124579999999999999887764 8999999999986542 1111 11111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
...+++.+|++++++.++..+.
T Consensus 205 ~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 205 DEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp GGGSBCHHHHHHHHHHHHTSCT
T ss_pred cccCCCHHHHHHHHHHHHcCCC
Confidence 1247899999999999998654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-18 Score=165.98 Aligned_cols=194 Identities=11% Similarity=0.063 Sum_probs=141.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 92 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD 92 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999754 45678999999998888743 679
Q ss_pred EEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||... .+..+...++....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 93 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 156 (260)
T 3awd_A 93 ILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV---------------- 156 (260)
T ss_dssp EEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc----------------
Confidence 9999999652 1111222344567789999999999998864 23 46777777654321
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHH--------HHHHHhcCceeccCCCccchhhHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
.+..+.+.|+.||...|.+++.+.+. .++++.++||+.++++..- ...+....+ ...+.+++|+|
T Consensus 157 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva 232 (260)
T 3awd_A 157 NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP----MGRVGQPDEVA 232 (260)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT----TSSCBCHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC----cCCCCCHHHHH
Confidence 02223478999999999999886433 6899999999999988421 122222111 13578999999
Q ss_pred HHHHHHHhcC---CCc-eeEccCCC
Q 005818 577 PISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 577 ~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
++++.++... ..| +|++.++.
T Consensus 233 ~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 233 SVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCchhccCCCcEEEECCce
Confidence 9999998653 234 89998864
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-18 Score=165.64 Aligned_cols=218 Identities=12% Similarity=0.037 Sum_probs=147.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-- 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-- 80 (676)
|+ ++||||||+|+||+++++.|+++ +++|++.+|...... ...+.. ..++.++.+|++|++++.++++..
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 93 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSA---KTRVLPLTLDVRDRAAMSAAVDNLPE 93 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTT---TSCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44 89999999999999999999999 688998888642111 001111 146899999999999999888542
Q ss_pred ---CCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCc-eEEEEecccccCCCCCCcCCC
Q 005818 81 ---KIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIK-RFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 81 ---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~-~~v~~SS~~vyg~~~~~~~~~ 147 (676)
++|+|||+||.... +.+.+++...+++|+.++.++.+++. +.+ .. +||++||...+....
T Consensus 94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~------ 166 (272)
T 2nwq_A 94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYP------ 166 (272)
T ss_dssp GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCT------
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCC------
Confidence 68999999997542 23345667889999999888777664 334 46 999999977653322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.+.++.... ....-.... . .... ..
T Consensus 167 --------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--~~~~~~~~~---~--~~~~----~~ 227 (272)
T 2nwq_A 167 --------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV--RFGGDQARY---D--KTYA----GA 227 (272)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------------CC
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc--ccccchHHH---H--Hhhc----cC
Confidence 2346999999999999988765 37999999999998875311 000000000 0 0000 01
Q ss_pred eeeeHHHHHHHHHHHHhcCC--CCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKGE--VGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~ 254 (676)
.++..+|+|++++.++..+. .++.+.+.++
T Consensus 228 ~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 228 HPIQPEDIAETIFWIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp CCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred CCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence 24789999999999997543 2344555443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.4e-19 Score=167.28 Aligned_cols=180 Identities=13% Similarity=0.075 Sum_probs=134.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhc-cCCCEEEECccccC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQN-VKPTHVFNAAGVTG 444 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~-~~~d~Vih~a~~~~ 444 (676)
|+|+||||+|+||++++++|+++ +| .++.+|++|++++.++++. -++|+|||+||...
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG 78 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 47999999999999999999987 44 4567899999999999882 13499999999652
Q ss_pred CCC-cchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHH
Q 005818 445 RPN-VDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522 (676)
Q Consensus 445 ~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 522 (676)
... .....++....+++|+.++.++++++++.+ .++|++||..+|. +..+.+.|+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~------------------~~~~~~~Y~~sK~a 140 (207)
T 2yut_A 79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV------------------QVPGFAAYAAAKGA 140 (207)
T ss_dssp CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH------------------SSTTBHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc------------------CCCCcchHHHHHHH
Confidence 111 122345567889999999999999996655 4788888877662 12345789999999
Q ss_pred HHHHHHHccCe---EEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCCc-eeE
Q 005818 523 VEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLSG-IWN 592 (676)
Q Consensus 523 ~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g-~yn 592 (676)
.|.+++.+.+. .++++.++||+.++++.. .+.. .....+++++|+|++++.+++++..+ +++
T Consensus 141 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~------~~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~ 206 (207)
T 2yut_A 141 LEAYLEAARKELLREGVHLVLVRLPAVATGLW------APLG--GPPKGALSPEEAARKVLEGLFREPVPALLE 206 (207)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG------GGGT--SCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred HHHHHHHHHHHHhhhCCEEEEEecCcccCCCc------cccC--CCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence 99999887433 589999999999998741 1111 12247899999999999999876443 443
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-18 Score=162.95 Aligned_cols=200 Identities=16% Similarity=0.109 Sum_probs=142.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC--CCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE--KIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--~~d~ 84 (676)
||+||||||+|+||+++++.|+++ +++|++.+|..... +.+. .....++.++.+|++|.+++.++++.. ..|+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKL--STVT-NCLSNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHH--HHHH-HTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH-HHHhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 468999999999999999999999 57788888864221 1111 111457889999999999999988543 3599
Q ss_pred EEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 85 IMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 85 Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
|||+||..... .+.+++...+++|+.++.++++++...- +..++|++||...+.+.. +..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~ 141 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA--------------QES 141 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT--------------TCH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC--------------CCc
Confidence 99999976532 2445567889999999999998876531 123899999977664332 235
Q ss_pred hhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
.|+.+|...+.+++.++.++ |+++..++||.+..+.... . +... ....+.+.+|+|++
T Consensus 142 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~------~~~~-------~~~~~~~~~dvA~~ 202 (230)
T 3guy_A 142 TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET------S------GKSL-------DTSSFMSAEDAALM 202 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------------------CCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh------c------CCCC-------CcccCCCHHHHHHH
Confidence 69999999999999988875 7999999999997653310 0 0001 12357899999999
Q ss_pred HHHHHhcCC
Q 005818 236 FDTILHKGE 244 (676)
Q Consensus 236 i~~~~~~~~ 244 (676)
++.++.++.
T Consensus 203 i~~l~~~~~ 211 (230)
T 3guy_A 203 IHGALANIG 211 (230)
T ss_dssp HHHHCCEET
T ss_pred HHHHHhCcC
Confidence 999987654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.9e-19 Score=171.89 Aligned_cols=228 Identities=12% Similarity=0.069 Sum_probs=154.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|..... ..+.+. ......++.++++|++|++++.++++.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999 68888887753221 111100 011245689999999999999888743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||..... .+.+++...+++|+.++.++++++... .+..++|++||...+.....
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------- 157 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--------- 157 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC---------
Confidence 3799999999986532 244556688899999999999998753 11368999999776644322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.++ |+++.++.||.|..+...... ......... .......+..
T Consensus 158 -----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~---------~~~~~~r~~~ 222 (262)
T 3ksu_A 158 -----YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-TKESTAFHK---------SQAMGNQLTK 222 (262)
T ss_dssp -----CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------------CCCCSCC
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-chHHHHHHH---------hcCcccCCCC
Confidence 3459999999999999988875 899999999998765211000 000000000 0111124678
Q ss_pred HHHHHHHHHHHHhcCC--CCceEEEcCCCccc
Q 005818 229 CEDVAEAFDTILHKGE--VGHVYNIGTKKERR 258 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~--~~~~y~i~~~~~~s 258 (676)
.+|+|++++.++.... .|+.+++.+|....
T Consensus 223 pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 223 IEDIAPIIKFLTTDGWWINGQTIFANGGYTTR 254 (262)
T ss_dssp GGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence 8999999999987522 57889998875433
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-18 Score=169.39 Aligned_cols=209 Identities=19% Similarity=0.191 Sum_probs=134.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHH---HHHHcc-C
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLV---HFILLT-E 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~---~~~~~~-~ 80 (676)
+++++||||||+|+||+++++.|++ ++.|++++|..... ..+. ...++.++.+|+.+.+.. .+.+.. .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~--~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHL--AALA---EIEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHH--HHHH---TSTTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHH--HHHH---hhcCCcceecccchHHHHHHHHHHHHhcC
Confidence 4578999999999999999999986 46788888864221 1111 134689999999887552 122222 2
Q ss_pred CCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|+|||+||...... +.+++...+++|+.++.++.+++. +.+ .++|++||...+.+..
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~----------- 141 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHP----------- 141 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC--------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCC-----------
Confidence 7999999999865422 344566788999999888887764 323 6899999987765433
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
+...|+.+|...+.+++.++.+ .|+++.+++||.+.++... .+. ... +... ....++++
T Consensus 142 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~----~~~--~~~~-------~~~~~~~p 203 (245)
T 3e9n_A 142 ---GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ--GLM----DSQ--GTNF-------RPEIYIEP 203 (245)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCGGGSCH
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh--hhh----hhh--hccc-------ccccCCCH
Confidence 2356999999999999988876 4899999999999887531 111 100 0001 11247899
Q ss_pred HHHHHHHHHHHhcCCCCceEEEc
Q 005818 230 EDVAEAFDTILHKGEVGHVYNIG 252 (676)
Q Consensus 230 ~D~a~ai~~~~~~~~~~~~y~i~ 252 (676)
+|+|++++.+++.+..+.+||+.
T Consensus 204 ~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 204 KEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCccceeeeE
Confidence 99999999999988878888875
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=181.01 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=154.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCcccc-ccCCC--CCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSN-LKNLN--PSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~-~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
...++||||||+|+||.+++++|+++ ++ +|++++|+..... ...+. ......++.++.+|++|++++.+++...
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 45689999999999999999999999 45 5888888653211 00000 0112356899999999999999988543
Q ss_pred ----CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccc-cCCCCCCcCCCCCCC
Q 005818 81 ----KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEV-YGETDEDAVVGNHEA 151 (676)
Q Consensus 81 ----~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~ 151 (676)
++|+|||+||..... .+.++....+++|+.|+++|+++++..+ .++||++||... +|...
T Consensus 302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g---------- 370 (486)
T 2fr1_A 302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG---------- 370 (486)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT----------
T ss_pred HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCC----------
Confidence 579999999987542 2444566788999999999999998876 899999999654 44322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
...|+.+|.+.+.++.+++ ..|+++++++||.+.+++...... ... + ......+++.+|
T Consensus 371 -----~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~~----~~~------~-----~~~g~~~i~~e~ 429 (486)
T 2fr1_A 371 -----LGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGPV----ADR------F-----RRHGVIEMPPET 429 (486)
T ss_dssp -----CTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC----------------------C-----TTTTEECBCHHH
T ss_pred -----CHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchhH----HHH------H-----HhcCCCCCCHHH
Confidence 3459999999999988765 459999999999998875421110 000 0 011236799999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHH
Q 005818 232 VAEAFDTILHKGEVGHVYNIGTKKERRVIDVAT 264 (676)
Q Consensus 232 ~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~ 264 (676)
+++++..+++.+... +.+.. +.+..+..
T Consensus 430 ~a~~l~~~l~~~~~~--~~v~~---~d~~~~~~ 457 (486)
T 2fr1_A 430 ACRALQNALDRAEVC--PIVID---VRWDRFLL 457 (486)
T ss_dssp HHHHHHHHHHTTCSS--CEECE---ECHHHHHH
T ss_pred HHHHHHHHHhCCCCe--EEEEe---CCHHHHhh
Confidence 999999999876432 22322 45665554
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=163.91 Aligned_cols=196 Identities=14% Similarity=0.111 Sum_probs=146.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 91 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999754 45789999999999888754 679
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+|||+||.......+...++.+..+++|+.|+.++++++.. . +.++|++||...+. +
T Consensus 92 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~ 153 (256)
T 3gaf_A 92 VLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN------------------T 153 (256)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC------------------C
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC------------------C
Confidence 99999997632122334456677899999999999999743 2 34788888876542 2
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+.... ....+.+++|+|+++
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----p~~r~~~~~dva~~~ 229 (256)
T 3gaf_A 154 NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT----PLGRLGEAQDIANAA 229 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC----TTSSCBCHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC----CCCCCCCHHHHHHHH
Confidence 23457899999999999988643 3579999999999998741 111121111 113577899999999
Q ss_pred HHHHhcC----CCceeEccCCCcccH
Q 005818 580 VEMAKRN----LSGIWNFTNPGVVSH 601 (676)
Q Consensus 580 ~~~~~~~----~~g~yn~~~~~~~s~ 601 (676)
+.++... .+.++++.+|...++
T Consensus 230 ~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 230 LFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred HHHcCCcccCccCCEEEECCCccccC
Confidence 9998653 235999999877654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=164.52 Aligned_cols=192 Identities=15% Similarity=0.052 Sum_probs=143.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL 83 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999765 35678999999999888855 67
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||..... ......++.+..+++|+.|+.++++++ ++.+ .++|++||...+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 146 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV----------------- 146 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------------
Confidence 9999999975211 112234455678999999999999998 4444 4788888876552
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.++.+. .+...+....+ ...+...+|+|++
T Consensus 147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~~~dva~~ 221 (246)
T 3osu_A 147 -GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP----LARFGQDTDIANT 221 (246)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT----TCSCBCHHHHHHH
T ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC----CCCCcCHHHHHHH
Confidence 123347799999999999888643 458999999999998763 23333333222 1346788999999
Q ss_pred HHHHHhcCC----CceeEccCCC
Q 005818 579 SVEMAKRNL----SGIWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~~----~g~yn~~~~~ 597 (676)
++.++..+. +.+|++.+|.
T Consensus 222 v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 222 VAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCccccCCCCCEEEeCCCc
Confidence 999887542 3589988864
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=156.70 Aligned_cols=215 Identities=15% Similarity=0.210 Sum_probs=156.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|.|+||||||++.||+++++.|+++ |++|++.+|..... ..+. ....++..+++|++|+++++++++. .
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~--~~~~--~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRS--ADFA--KERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH--TTCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHH--HHHH--HhcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999 78999998864221 1111 1245788999999999998877632 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++|++||+||.... +.+.+++...+++|+.++..+.+++..+ .+-.++|++||...+.+...
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~------------ 142 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD------------ 142 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC------------
Confidence 79999999987653 3455678899999999999988877532 11268999999766543332
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
...|+.+|.....+.+.++.++ ++++..+.||.|-.+... .+..... .. +++ + -+...+|+
T Consensus 143 --~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~--~~~~~~~----~~--~Pl---~----R~g~pedi 205 (247)
T 3ged_A 143 --SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ--EFTQEDC----AA--IPA---G----KVGTPKDI 205 (247)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----CCHHHH----HT--STT---S----SCBCHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH--HHHHHHH----hc--CCC---C----CCcCHHHH
Confidence 2459999999999998887765 799999999999765432 2222222 11 121 1 25567999
Q ss_pred HHHHHHHHhcCC-CCceEEEcCCC
Q 005818 233 AEAFDTILHKGE-VGHVYNIGTKK 255 (676)
Q Consensus 233 a~ai~~~~~~~~-~~~~y~i~~~~ 255 (676)
|.++++++...- .|+.+.+.+|-
T Consensus 206 A~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 206 SNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHHHHhCCCCCCCeEEECcCH
Confidence 999999986432 67888888774
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.75 E-value=9e-18 Score=159.77 Aligned_cols=227 Identities=15% Similarity=0.090 Sum_probs=162.4
Q ss_pred CCCC--CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATV--YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~--~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|++. .++|++|||||++.||+++++.|++. |.+|++.+|.......+.+ .....++..+++|++|++++++++.
T Consensus 1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~--~~~g~~~~~~~~Dv~d~~~v~~~~~ 76 (247)
T 4hp8_A 1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDII--AKDGGNASALLIDFADPLAAKDSFT 76 (247)
T ss_dssp --CTTCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHH--HHTTCCEEEEECCTTSTTTTTTSST
T ss_pred CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHH--HHhCCcEEEEEccCCCHHHHHHHHH
Confidence 6664 56899999999999999999999999 7889888886432111111 1234578999999999999988887
Q ss_pred cCCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
..++|++||+||.... +.+.++|...+++|+.|+..+.+++. +.++-.++|++||...+-+...
T Consensus 77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~-------- 148 (247)
T 4hp8_A 77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR-------- 148 (247)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------
T ss_pred hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------
Confidence 7789999999998653 34566788999999999999988653 2232468999999765433322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|.....+.+.++.++ |+++..+-||.|-.+.......-+...+.....-++. -+-
T Consensus 149 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~g 213 (247)
T 4hp8_A 149 ------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG---------RWG 213 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS---------SCB
T ss_pred ------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC---------CCc
Confidence 2359999999999998877764 8999999999997664310000011223333333221 244
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
..+|+|.++++++.... .|+.+.+.+|
T Consensus 214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 214 HSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 56999999999885432 5788888776
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=165.96 Aligned_cols=223 Identities=13% Similarity=0.053 Sum_probs=156.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEc-CCCcccc--ccCCCCCCCCCCeEEEEecCCCHH----------
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSN--LKNLNPSRLSPNFKFIKGDVASAD---------- 71 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~-r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~---------- 71 (676)
|++++||||||+|+||+++++.|+++ +++|++.+ |...... .+.+. .....++.++++|++|++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLN-ARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHH-HHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHh-hhcCCeeEEEEeecCCcccccccccccc
Confidence 45689999999999999999999999 68898888 7532110 00000 011347899999999998
Q ss_pred -------HHHHHHcc-----CCCCEEEEccccCCcC----Cc--------------CCChHHHHHHHHHHHHHHHHHHHH
Q 005818 72 -------LVHFILLT-----EKIDTIMHFAAQTHVD----NS--------------FGNSFEFTKNNIYGTHVLLEACKI 121 (676)
Q Consensus 72 -------~~~~~~~~-----~~~d~Vih~a~~~~~~----~~--------------~~~~~~~~~~nv~~~~~ll~a~~~ 121 (676)
++.++++. .++|++||+||..... .+ .+++...+++|+.++.++++++..
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88777643 2899999999976432 22 345567889999999999988763
Q ss_pred c---CC------CceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCC
Q 005818 122 T---GQ------IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNN 189 (676)
Q Consensus 122 ~---~~------~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~ 189 (676)
. .+ ..+||++||...+.+.. ....|+.+|...+.+.+.++.+ +|+++.+++||.
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~ 229 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 229 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCC--------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence 2 11 36899999977654322 2346999999999999888776 389999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 190 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+..+. . .. +..........++ + . .+...+|+|++++.++... ..++.+++.+|..
T Consensus 230 v~T~~-~-~~--~~~~~~~~~~~p~-----~-~--r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 230 SVLVD-D-MP--PAVWEGHRSKVPL-----Y-Q--RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287 (291)
T ss_dssp BCCGG-G-SC--HHHHHHHHTTCTT-----T-T--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred ccCCc-c-CC--HHHHHHHHhhCCC-----C-C--CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence 97765 2 11 2333333322211 0 0 2567899999999998642 2577888887753
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-18 Score=166.93 Aligned_cols=203 Identities=15% Similarity=0.119 Sum_probs=140.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------------eeccccCCChHHHHHHhhcc-
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------------EYGKGRLENRSQLLADIQNV- 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------------~~~~~Dl~d~~~~~~~~~~~- 431 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|.++++++++.+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ 86 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence 3589999999999999999999999755 24568999999999888775
Q ss_pred ----CC-CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCC
Q 005818 432 ----KP-THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGT 499 (676)
Q Consensus 432 ----~~-d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~ 499 (676)
++ |+|||+||...... .....++.+..+++|+.|+.++++++... + .++|++||...+.
T Consensus 87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 157 (264)
T 2pd6_A 87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--------- 157 (264)
T ss_dssp HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH---------
T ss_pred HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc---------
Confidence 34 99999999652100 12234556678999999999999998764 3 4788888875442
Q ss_pred CCCccccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--HHHHHHhcCceeccCCCccchhh
Q 005818 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 500 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+...|+.||...|.+++.+.+. .++++.++||+.++++.. +.......-........+.+++|
T Consensus 158 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (264)
T 2pd6_A 158 ---------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPED 228 (264)
T ss_dssp ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHH
T ss_pred ---------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHH
Confidence 1123467999999999998886433 689999999999998742 11111100000001135778999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCCcccHHHH
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPGVVSHNEI 604 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~~~s~~e~ 604 (676)
+|++++.++..+ . +..+++.++..++.+..
T Consensus 229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 229 VADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 999999998753 2 34899988876655443
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.4e-17 Score=160.22 Aligned_cols=213 Identities=15% Similarity=0.142 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC---------CCCCCCeEEEEecCCCHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---------SRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---------~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.. .....++.++++|++|++++.+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHP--KLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCS--SSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhh--hhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 45689999999999999999999999 678999988753211 1000 0113468999999999999888
Q ss_pred HHccC-----CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCC
Q 005818 76 ILLTE-----KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 76 ~~~~~-----~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~ 143 (676)
+++.. ++|++||+||..... .+.+++...+++|+.++.++.+++...- +..++|++||...+....
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-- 160 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW-- 160 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC--
Confidence 87432 899999999987532 3444566788999999999999886541 246999999966543321
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
.+...|+.+|...+.+++.++.+ +|+++.++.||.+... .+.+....... +
T Consensus 161 -----------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t---------~~~~~~~~~~~-~----- 214 (285)
T 3sc4_A 161 -----------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT---------AAVQNLLGGDE-A----- 214 (285)
T ss_dssp -----------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC---------HHHHHHHTSCC-C-----
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc---------HHHHhhccccc-c-----
Confidence 12356999999999999988876 4899999999953321 11222222211 1
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC--CCceEEE
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE--VGHVYNI 251 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i 251 (676)
...+...+|+|++++.++..+. .++.+.+
T Consensus 215 --~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~ 245 (285)
T 3sc4_A 215 --MARSRKPEVYADAAYVVLNKPSSYTGNTLLC 245 (285)
T ss_dssp --CTTCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred --ccCCCCHHHHHHHHHHHhCCcccccceEEEE
Confidence 1135678999999999997653 3444433
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.7e-18 Score=164.39 Aligned_cols=194 Identities=10% Similarity=-0.022 Sum_probs=140.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+|||+|
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 579999999999999999999999876 45678999999999888754 689999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
|...........++....+++|+.|+.++++++... + .++|++||...+. +..+...
T Consensus 108 g~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~~ 169 (260)
T 3gem_A 108 SEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK------------------GSSKHIA 169 (260)
T ss_dssp CCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT------------------CCSSCHH
T ss_pred CccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC------------------CCCCcHh
Confidence 975322222233445578999999999999988552 3 5788888876542 1234468
Q ss_pred hhhhHHHHHHHHHHccCeE--EEEeeecccCCCCChHHH----HHHHHhcCceeccCCCccchhhHHHHHHHHHhcC-C-
Q 005818 516 YSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRNF----ITKISRYNKVVNIPNSMTILDELLPISVEMAKRN-L- 587 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~- 587 (676)
|+.||...+.+.+.+...+ ++++..++|+.+..+... ...+.... ....+..++|+|++++.+++.. .
T Consensus 170 Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~----p~~r~~~~edva~~v~~L~~~~~it 245 (260)
T 3gem_A 170 YCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKS----ALGIEPGAEVIYQSLRYLLDSTYVT 245 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------C----CSCCCCCTHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhhCCCCC
Confidence 9999999999988863211 499999999999876421 11111111 1123557899999999998655 3
Q ss_pred CceeEccCCCccc
Q 005818 588 SGIWNFTNPGVVS 600 (676)
Q Consensus 588 ~g~yn~~~~~~~s 600 (676)
+.++++.+|..++
T Consensus 246 G~~i~vdGG~~~~ 258 (260)
T 3gem_A 246 GTTLTVNGGRHVK 258 (260)
T ss_dssp SCEEEESTTTTTC
T ss_pred CCEEEECCCcccC
Confidence 3589998886654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=163.04 Aligned_cols=197 Identities=15% Similarity=0.084 Sum_probs=142.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv 91 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLC 91 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 34678999999999888744 579999
Q ss_pred ECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 438 NAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 438 h~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
|+||..... ......++....+++|+.++.++++++... +.++|++||...+. +.
T Consensus 92 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~ 153 (263)
T 3ak4_A 92 ANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV------------------GA 153 (263)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------------CC
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc------------------CC
Confidence 999965211 112233455678999999999999988653 35788888865441 11
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH-----------HHHHhcCceeccCCCccchhh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-----------TKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-----------~~~~~~~~~~~~~~~~~~v~D 574 (676)
.+...|+.||...|.+.+.+.. ..++++..++|+.++++.. .. ......-........+.+++|
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 233 (263)
T 3ak4_A 154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED 233 (263)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHH
Confidence 2346799999999999888643 2489999999999998842 11 000000000001235889999
Q ss_pred HHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 575 LLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
+|++++.++..+ ..| +|++.++..
T Consensus 234 vA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 234 VADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 999999998754 234 899988753
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=164.41 Aligned_cols=199 Identities=15% Similarity=0.115 Sum_probs=143.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999765 34568999999999888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .....++.+..+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 149 (263)
T 3ai3_A 87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ----------------- 149 (263)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------------
Confidence 99999999652111 1123345567889999999999988753 34 4788888876652
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHh-----c----Ccee---ccCCCcc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR-----Y----NKVV---NIPNSMT 570 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~-----~----~~~~---~~~~~~~ 570 (676)
+..+...|+.||...|.+.+.+.. ..++++..++|+.+++|.. ....+.. . .... .....+.
T Consensus 150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (263)
T 3ai3_A 150 -PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA 228 (263)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCB
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCc
Confidence 112346799999999999988643 3589999999999999842 1110000 0 0000 1123688
Q ss_pred chhhHHHHHHHHHhcC---C-CceeEccCCCccc
Q 005818 571 ILDELLPISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
+++|+|++++.++..+ . +.+|++.++...|
T Consensus 229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 9999999999998754 2 3489999886654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=176.27 Aligned_cols=221 Identities=18% Similarity=0.088 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----C
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----E 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----~ 80 (676)
+..+++|||||+|+||.+++++|+++ +++|++++|........... ...+++++.+|++|.+++.++++. .
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~---~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVA---DKVGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHH---HHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHH---HHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 67888888754222111110 112467899999999998887742 1
Q ss_pred --CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcC---CCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 --KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITG---QIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|+|||+||..... .+.+++...+++|+.+++++++++.... +..+||++||...+-...+
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g--------- 356 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG--------- 356 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT---------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC---------
Confidence 499999999987542 3555677899999999999999998641 2579999999665533322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+++.++.+ .|+++.++.||.|..+.... +............+ ...+..
T Consensus 357 -----~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~---------l~r~g~ 420 (454)
T 3u0b_A 357 -----QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA--IPLATREVGRRLNS---------LFQGGQ 420 (454)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBT---------TSSCBC
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh--cchhhHHHHHhhcc---------ccCCCC
Confidence 346999999888888776654 48999999999998775421 10000011111111 112457
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+++++++++... -.++++++.++.
T Consensus 421 pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 421 PVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred HHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 899999999988643 367889998764
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=164.31 Aligned_cols=228 Identities=14% Similarity=0.093 Sum_probs=155.9
Q ss_pred CCCCCCCCeEEEEcC--CchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGA--AGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|...+++|+|||||| +|+||+++++.|+++ +++|++.+|..... .+.+.. ....++.++.+|++|+++++++++
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRL-IQRITD-RLPAKAPLLELDVQNEEHLASLAG 76 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHH-HHHHHT-TSSSCCCEEECCTTCHHHHHHHHH
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHH-HHHHHH-hcCCCceEEEccCCCHHHHHHHHH
Confidence 334466789999999 999999999999999 68888888864221 011111 113467899999999999888874
Q ss_pred cC--------CCCEEEEccccCCc---------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCC
Q 005818 79 TE--------KIDTIMHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGET 140 (676)
Q Consensus 79 ~~--------~~d~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~ 140 (676)
.. ++|+|||+||.... +.+.+++...+++|+.++.++.+++...- +-.+||++||...++..
T Consensus 77 ~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~ 156 (269)
T 2h7i_A 77 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP 156 (269)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT
T ss_pred HHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC
Confidence 32 79999999997641 23445566789999999999999987531 12589999996543211
Q ss_pred CCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC-------CCCh---HHHHHHH
Q 005818 141 DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF-------PEKL---IPKFILL 207 (676)
Q Consensus 141 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~-------~~~~---~~~~~~~ 207 (676)
....|+.+|...+.+.+.++.++ |+++.+++||.+..+... +... ...+...
T Consensus 157 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (269)
T 2h7i_A 157 ---------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG 221 (269)
T ss_dssp ---------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHh
Confidence 23569999999999998887764 899999999998765210 0000 0001111
Q ss_pred HHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 208 AMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.....+. + +.+...+|+|++++.++.... .|+.+.+.+|.
T Consensus 222 ~~~~~p~-----~---rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 222 WDQRAPI-----G---WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp HHHHCTT-----C---CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred hhccCCc-----c---cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 1111111 0 024566999999999986432 56788887764
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-18 Score=168.98 Aligned_cols=196 Identities=12% Similarity=0.038 Sum_probs=141.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 100 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 100 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999755 34678999999999888743 56
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|+|||+||..... ......++.+..+++|+.++.++++++... +.++|++||...+.. +
T Consensus 101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~ 163 (274)
T 1ja9_A 101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-----------------G 163 (274)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------------S
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccC-----------------C
Confidence 9999999965210 112233455678999999999999998775 457888888765511 1
Q ss_pred CCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHH--HH-------------HHHhcCceeccCCCccc
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--IT-------------KISRYNKVVNIPNSMTI 571 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--~~-------------~~~~~~~~~~~~~~~~~ 571 (676)
..+...|+.||...|.+++.+.+. .++++..++|+.++++... .. .....-........+++
T Consensus 164 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (274)
T 1ja9_A 164 IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGY 243 (274)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccC
Confidence 123467999999999999886433 4799999999999987311 00 00000000011236889
Q ss_pred hhhHHHHHHHHHhcC----CCceeEccCC
Q 005818 572 LDELLPISVEMAKRN----LSGIWNFTNP 596 (676)
Q Consensus 572 v~D~a~~~~~~~~~~----~~g~yn~~~~ 596 (676)
++|+|++++.++..+ .+.+||+.++
T Consensus 244 ~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 244 PADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 999999999999754 2348999876
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=160.94 Aligned_cols=219 Identities=12% Similarity=0.097 Sum_probs=146.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHH-cc-CCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFIL-LT-EKID 83 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~-~~-~~~d 83 (676)
||+||||||+|+||+++++.|+++ +++|++.+|...... ...+. ....++..+ |..+.+.+.+.+ +. .++|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~--~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFA--ETYPQLKPM--SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHH--HHCTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--hcCCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999 688999888642211 00000 001233333 555544332222 11 3899
Q ss_pred EEEEccccC-Cc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 84 TIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 84 ~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
+|||+||.. .. +.+.+++...+++|+.++.++++++. +.+ ..+||++||...+....
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------- 140 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK------------- 140 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT-------------
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC-------------
Confidence 999999986 32 22444567889999999999998874 333 47999999976654322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHH------HHHHHHHCCCCceeecCCCceEe
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP------KFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...+.+++.++.+. |+++++++||.|+|+........+ .......... + ...
T Consensus 141 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~--p-------~~~ 210 (254)
T 1zmt_A 141 -ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT--A-------LQR 210 (254)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS--S-------SSS
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC--C-------CCC
Confidence 23469999999999999887764 899999999999887653221111 1111111111 1 113
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+.+.+|+|++++.++.... .++.+++.+|.
T Consensus 211 ~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 243 (254)
T 1zmt_A 211 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 243 (254)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 6789999999999987543 57889998774
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=165.37 Aligned_cols=223 Identities=18% Similarity=0.106 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|..... +.+. .....++.++.+|++|++++.++++.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERL--RELE-VAHGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HHTBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHH--HHHH-HHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 55789999999999999999999999 68899988864221 1111 11235789999999999998877643
Q ss_pred CCCCEEEEccccCCcCC---------cCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCC
Q 005818 80 EKIDTIMHFAAQTHVDN---------SFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~---------~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+||...... ..+++...+++|+.++.++++++...- +-.++|++||...+....
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 150 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG------- 150 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS-------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC-------
Confidence 38999999999854211 112356788999999999998875421 125999999976654332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCC--hHH------HHHHHHHCCCCceeec
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEK--LIP------KFILLAMKGKPLPIHG 218 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~--~~~------~~~~~~~~~~~~~~~~ 218 (676)
....|+.+|...+.+.+.++.++ .+++..+.||.|..+...... ... .+........+.
T Consensus 151 -------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---- 219 (281)
T 3zv4_A 151 -------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI---- 219 (281)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT----
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC----
Confidence 23469999999999999988775 389999999999887432110 000 011112211111
Q ss_pred CCCceEeeeeHHHHHHHHHHHHh-cC---CCCceEEEcCCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILH-KG---EVGHVYNIGTKK 255 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~-~~---~~~~~y~i~~~~ 255 (676)
..+...+|+|.+++.++. .. -.|+.+++.+|.
T Consensus 220 -----~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 220 -----GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp -----SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred -----CCCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence 136678999999999987 32 267889998874
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=161.76 Aligned_cols=191 Identities=13% Similarity=0.095 Sum_probs=139.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID 82 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999999754 34578999999999888743 579
Q ss_pred EEEECccccCCCC----cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 435 HVFNAAGVTGRPN----VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 435 ~Vih~a~~~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|||+||...... .....++.+..+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------------- 147 (250)
T 2cfc_A 83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV--------------- 147 (250)
T ss_dssp EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------
T ss_pred EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc---------------
Confidence 9999999652111 1112345667889999999887776643 34 4778888876542
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+.+.|+.||...|.+++.+... .++++..++|+.++++.. +...+....+ ...+.+.+|
T Consensus 148 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d 220 (250)
T 2cfc_A 148 ---AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP----QKEIGTAAQ 220 (250)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT----TCSCBCHHH
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC----CCCCcCHHH
Confidence 1133478999999999999887433 489999999999998841 1111221111 135779999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCC
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
+|++++.++..+ . +.++++.++.
T Consensus 221 va~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 221 VADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCchhhcccCCEEEECCce
Confidence 999999998764 2 3488887764
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.6e-18 Score=165.56 Aligned_cols=200 Identities=16% Similarity=0.123 Sum_probs=142.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
|++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 86 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI 86 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999754 46779999999999988855 78
Q ss_pred CEEEECccccC---CCCcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 434 THVFNAAGVTG---RPNVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 434 d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
|+|||+||... .+..+...++....+++|+.++.++++++ ++.+ .++|++||...+..
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------------- 152 (264)
T 3i4f_A 87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA-------------- 152 (264)
T ss_dssp CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC--------------
T ss_pred CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc--------------
Confidence 99999999421 11122233455678999999999999998 4444 47788877643311
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
.+..+.+.|+.||...+.+++.+.. ..++++..++|+.++++. ..................+...+|+|++++
T Consensus 153 --~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~ 230 (264)
T 3i4f_A 153 --PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTIS 230 (264)
T ss_dssp --CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHH
T ss_pred --CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence 1223457899999999999988643 358999999999999874 112211111111111125778999999999
Q ss_pred HHHhcC----CCceeEccCCCcc
Q 005818 581 EMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 581 ~~~~~~----~~g~yn~~~~~~~ 599 (676)
.++... .+.++++.+|-..
T Consensus 231 ~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 231 FLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp HHHSGGGTTCCSCEEEESCSCCC
T ss_pred HHcCcccCCCCCcEEEEcCceee
Confidence 998754 2358999887554
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=176.71 Aligned_cols=225 Identities=15% Similarity=0.111 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCcccc-ccCCC--CCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSN-LKNLN--PSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~-~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
...++||||||+|+||.+++++|+++ ++ +|++++|+..... ...+. ......++.++.+|++|.+++.+++...
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 44689999999999999999999998 45 6777888653211 00000 0112446899999999999999998666
Q ss_pred CCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc-ccCCCCCCcCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE-VYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~~ 155 (676)
++|+|||+||..... .+.++....+++|+.|+++|++++....+.++||++||.. ++|...
T Consensus 335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-------------- 400 (511)
T 2z5l_A 335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-------------- 400 (511)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT--------------
T ss_pred CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC--------------
Confidence 799999999987642 2334556788999999999999998762378999999964 454322
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
...|+.+|...|.+++.++ ..|+++++++||.+.+.+... .... ...... ...+++.+|++++
T Consensus 401 -~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~-~~~~---~~~~~~-----------g~~~l~~e~~a~~ 463 (511)
T 2z5l_A 401 -QGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA-GAGE---ESLSRR-----------GLRAMDPDAAVDA 463 (511)
T ss_dssp -BHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC-CHHH---HHHHHH-----------TBCCBCHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc-cccH---HHHHhc-----------CCCCCCHHHHHHH
Confidence 3469999999999998764 569999999999985444321 2211 111100 0146889999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDIC 267 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~ 267 (676)
+..+++++.. .+.+.. +.+..+...+.
T Consensus 464 l~~al~~~~~--~v~v~~---~d~~~~~~~~~ 490 (511)
T 2z5l_A 464 LLGAMGRNDV--CVTVVD---VDWERFAPATN 490 (511)
T ss_dssp HHHHHHHTCS--EEEECC---BCHHHHHHHHH
T ss_pred HHHHHhCCCC--EEEEEe---CCHHHHHhhhc
Confidence 9999987642 233332 45666655444
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=165.62 Aligned_cols=196 Identities=14% Similarity=0.124 Sum_probs=138.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999765 45678999999999888765 78
Q ss_pred CEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 434 THVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 434 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
|+|||+||.... +......++....+++|+.|+.++++++... +.++|++||...+.+.
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 174 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----------- 174 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-----------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-----------
Confidence 999999997521 1111234556678999999999999988654 3468888887665321
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHH---HHHHhcCceeccCCCccchhhHHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI---TKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
......|+.||...|.+++.+.. ..++++..++|+.++++...- ...............+..++|+|+
T Consensus 175 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~ 248 (272)
T 4e3z_A 175 ------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVAD 248 (272)
T ss_dssp ------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHH
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHH
Confidence 11235699999999999888643 348999999999999774111 000000000011124667999999
Q ss_pred HHHHHHhcC---C-CceeEccCC
Q 005818 578 ISVEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 578 ~~~~~~~~~---~-~g~yn~~~~ 596 (676)
+++.++... . +.+|++.+|
T Consensus 249 ~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 249 AILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCCccccccCCEEeecCC
Confidence 999998654 2 348888875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=161.72 Aligned_cols=199 Identities=14% Similarity=0.217 Sum_probs=143.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|++|
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 86 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLV 86 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999755 45678999999999888754 679999
Q ss_pred ECccccCCCCc-----chhccchhhHHhhhhhhHHHHHHHHHHc-----------CCcEEEeecCeeeecCCCCCCCCCC
Q 005818 438 NAAGVTGRPNV-----DWCETHKPETIRTNVVGTLTLADVCREN-----------GLLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 438 h~a~~~~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----------~~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
|+||....... ....++....+++|+.|+.++++++... +.++|++||...+..
T Consensus 87 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~---------- 156 (257)
T 3tpc_A 87 NCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG---------- 156 (257)
T ss_dssp ECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----------
T ss_pred ECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC----------
Confidence 99997521111 2223556678999999999999998763 246888888766521
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHhc-CceeccCCCccchhhH
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRY-NKVVNIPNSMTILDEL 575 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~-~~~~~~~~~~~~v~D~ 575 (676)
..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. +....... .........+...+|+
T Consensus 157 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dv 228 (257)
T 3tpc_A 157 --------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEY 228 (257)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHH
T ss_pred --------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHH
Confidence 12347799999999999887643 3689999999999998731 11111000 0111122457789999
Q ss_pred HHHHHHHHhcC-CC-ceeEccCCCccc
Q 005818 576 LPISVEMAKRN-LS-GIWNFTNPGVVS 600 (676)
Q Consensus 576 a~~~~~~~~~~-~~-g~yn~~~~~~~s 600 (676)
|++++.++... .+ .++++.++..++
T Consensus 229 a~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 229 AALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHHHHcccCCcCCcEEEECCCccCC
Confidence 99999998764 33 488888876544
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=6e-18 Score=162.88 Aligned_cols=227 Identities=13% Similarity=0.120 Sum_probs=159.3
Q ss_pred CCCC--CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHH
Q 005818 1 MATV--YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFI 76 (676)
Q Consensus 1 ~~~~--~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~ 76 (676)
|+++ .+.|++|||||++.||+++++.|+++ |.+|++.+|...... .+.+ .....++..+++|++|+++++++
T Consensus 1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l--~~~g~~~~~~~~Dv~~~~~v~~~ 76 (255)
T 4g81_D 1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTL--TRKGYDAHGVAFDVTDELAIEAA 76 (255)
T ss_dssp --CTTCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHH--HHTTCCEEECCCCTTCHHHHHHH
T ss_pred CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHH
Confidence 6664 46899999999999999999999999 789999988642211 0111 11245788999999999998877
Q ss_pred Hcc-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCC
Q 005818 77 LLT-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 77 ~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~ 143 (676)
++. .++|++||+||.... +.+.+++...+++|+.++..+.+++.. .+.-.++|++||...+.....
T Consensus 77 ~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~- 155 (255)
T 4g81_D 77 FSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT- 155 (255)
T ss_dssp HHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT-
T ss_pred HHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC-
Confidence 632 379999999998653 345667889999999999998876532 222469999999766544332
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
...|+.+|.....+.+.++.+ +|+++..+.||.|..+......--..+........++.
T Consensus 156 -------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~----- 217 (255)
T 4g81_D 156 -------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ----- 217 (255)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC-----
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC-----
Confidence 345999999999999887776 48999999999998764310000011222222222211
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
.+...+|+|.++++++... -.|+.+.+.+|
T Consensus 218 ----R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 218 ----RWGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp ----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 2455689999999988542 26788888776
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=164.14 Aligned_cols=198 Identities=10% Similarity=-0.004 Sum_probs=144.4
Q ss_pred ccEEEEEcCC--cchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRT--GWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~--G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++|+||||+ |+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999 999999999999999865 24568999999998888754 57
Q ss_pred CEEEECccccC-----CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 434 THVFNAAGVTG-----RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 434 d~Vih~a~~~~-----~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
|+|||+||... .|......++.+..+++|+.++.++++++... +.++|++||...+.
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------- 152 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK--------------- 152 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS---------------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC---------------
Confidence 99999999652 01112234556678999999999999999775 35788888865442
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+...|+.||...|.+++.+... .++++..++|+.++++.. +...+....+ ...+.+++|
T Consensus 153 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~d 225 (261)
T 2wyu_A 153 ---VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP----LRRNITQEE 225 (261)
T ss_dssp ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHST----TSSCCCHHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCC----CCCCCCHHH
Confidence 1123467999999999999886433 489999999999998731 1112221111 124678999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCCcccHHH
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPGVVSHNE 603 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~~~s~~e 603 (676)
+|++++.++... . +.+|++.++...+..|
T Consensus 226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 226 VGNLGLFLLSPLASGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred HHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence 999999998643 2 3489999886655433
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-17 Score=159.97 Aligned_cols=194 Identities=12% Similarity=0.059 Sum_probs=138.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~----~~d~Vi 437 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++|+||
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li 90 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILV 90 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEE
Confidence 3689999999999999999999999754 34678999999998887642 679999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++.+..+++|+.++.++++++. +.+ .++|++||...+... +..
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------~~~ 154 (254)
T 2wsb_A 91 NSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN----------------RPQ 154 (254)
T ss_dssp ECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------SSS
T ss_pred ECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC----------------CCC
Confidence 9999652111 111223445778999999888777663 344 477888887655211 222
Q ss_pred CCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHH--------HHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
|.+.|+.||...|.+++.+... .++++.++||+.++++... ...+.... ....+.+++|+|++++
T Consensus 155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~ 230 (254)
T 2wsb_A 155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT----PMGRCGEPSEIAAAAL 230 (254)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS----TTSSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC----CCCCCCCHHHHHHHHH
Confidence 3478999999999999886433 4899999999999998421 11122111 1135789999999999
Q ss_pred HHHhcC---C-CceeEccCCC
Q 005818 581 EMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 581 ~~~~~~---~-~g~yn~~~~~ 597 (676)
.++..+ . +.++++.++.
T Consensus 231 ~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 231 FLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCcccccccCCEEEECCCE
Confidence 998653 2 3488887763
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=163.85 Aligned_cols=193 Identities=13% Similarity=0.135 Sum_probs=139.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI 86 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999755 34568999999999888744 57
Q ss_pred CEEEECccc-cCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC------CcEEEeecCeeeecCCCCCCCCCC
Q 005818 434 THVFNAAGV-TGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG------LLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 434 d~Vih~a~~-~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~------~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
|+|||+||. ... +......++....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------- 156 (258)
T 3afn_B 87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---------- 156 (258)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----------
T ss_pred CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----------
Confidence 999999996 310 111122334557789999999999987743 12 46777777654420
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccch
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v 572 (676)
+..+.+.|+.||...|.+++.+.. ..++++.+++|+.++++. .+...+....+ ...++++
T Consensus 157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~ 225 (258)
T 3afn_B 157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIP----MGRFGTA 225 (258)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCT----TCSCBCG
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCC----CCcCCCH
Confidence 113447899999999999988643 248999999999999874 12233322211 2368899
Q ss_pred hhHHHHHHHHHhcC-----CCceeEccCCC
Q 005818 573 DELLPISVEMAKRN-----LSGIWNFTNPG 597 (676)
Q Consensus 573 ~D~a~~~~~~~~~~-----~~g~yn~~~~~ 597 (676)
+|+|++++.++..+ .+.+|++.++.
T Consensus 226 ~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 226 EEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp GGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 99999999998753 23489998864
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=163.81 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=130.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhc------cCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQN------VKP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~------~~~ 433 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|.++++++++. -++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 93 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 93 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999754 4567899999998888764 267
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||..... ..+...++....+++|+.++.++++++ ++.+ .++|++||...+..
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------- 157 (266)
T 1xq1_A 94 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS---------------- 157 (266)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC----------------
Confidence 9999999965210 111234455678999999999999998 3444 57888888766531
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--HHHH-HHhcCceeccCCCccchhhHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITK-ISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~-~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
..+.+.|+.||...|.+++.+.+. .++++..++|+.++++.. .... .............+.+++|+|++++.
T Consensus 158 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (266)
T 1xq1_A 158 --ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF 235 (266)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 123478999999999999886433 489999999999998741 1100 00000000011257789999999999
Q ss_pred HHhcC---C-CceeEccCCCcc
Q 005818 582 MAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 582 ~~~~~---~-~g~yn~~~~~~~ 599 (676)
++..+ . +.+|++.++...
T Consensus 236 l~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 236 LCMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp HTSGGGTTCCSCEEECCCCEEE
T ss_pred HcCccccCccCcEEEEcCCccc
Confidence 88653 2 348999887543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=160.00 Aligned_cols=194 Identities=11% Similarity=0.045 Sum_probs=144.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeecc----ccCCChHHHHHHhhcc-CCCEEEECccccC--CCCcchhccchh
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK----GRLENRSQLLADIQNV-KPTHVFNAAGVTG--RPNVDWCETHKP 456 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~----~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~--~~~~~~~~~~~~ 456 (676)
.++++||||+|+||++++++|+++|++|.... +|++|+++++++++.. ++|++||+||..+ .+..+...++..
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~ 85 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAK 85 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHH
Confidence 35899999999999999999999999985543 7999999999998764 6799999999652 111223345566
Q ss_pred hHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe
Q 005818 457 ETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV 533 (676)
Q Consensus 457 ~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 533 (676)
..+++|+.++.++++++... +.++|++||...+. +..+...|+.||...|.+.+.+...
T Consensus 86 ~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------~~~~~~~Y~asK~a~~~~~~~la~e 147 (223)
T 3uce_A 86 YAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK------------------VVANTYVKAAINAAIEATTKVLAKE 147 (223)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS------------------CCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc------------------CCCCchHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999775 34788888875542 2234468999999999998886432
Q ss_pred EE-EEeeecccCCCCChH------H----HHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC-C-CceeEccCCCcc
Q 005818 534 CT-LRVRMPISSDLNNPR------N----FITKISRYNKVVNIPNSMTILDELLPISVEMAKRN-L-SGIWNFTNPGVV 599 (676)
Q Consensus 534 ~~-l~~~~~r~~~~~g~~------~----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~-~g~yn~~~~~~~ 599 (676)
+. +++..+.|+.+..+. . +........ ....+..++|+|++++.++... . +.++++.++..+
T Consensus 148 ~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 148 LAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL----PVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS----TTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred hcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC----CCCCccCHHHHHHHHHHHccCCCCCCcEEEecCCeec
Confidence 21 899999999998773 1 111122111 1235778999999999998865 3 348998887654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=163.20 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=142.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|++|
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 90 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVD 90 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 45678999999999888754 679999
Q ss_pred ECccccCCCC---cchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 438 NAAGVTGRPN---VDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 438 h~a~~~~~~~---~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|+||...... .+...++.+..+++|+.|+.++++++ ++.+ .++|++||...+. +
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------------~ 152 (271)
T 3tzq_B 91 NNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA------------------A 152 (271)
T ss_dssp ECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------------B
T ss_pred ECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC------------------C
Confidence 9999652101 12234455678999999999999998 4444 4788888876552 1
Q ss_pred CCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.||...+.+++.+... .++++..++|+.+++|.. +...+.... ....+...+|+|+++
T Consensus 153 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~~~r~~~p~dvA~~v 228 (271)
T 3tzq_B 153 YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHH----LAGRIGEPHEIAELV 228 (271)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTS----TTSSCBCHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 234478999999999999886433 689999999999998741 122222111 113467899999999
Q ss_pred HHHHhcC---C-CceeEccCC
Q 005818 580 VEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~-~g~yn~~~~ 596 (676)
+.++... . +.++++.+|
T Consensus 229 ~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 229 CFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCcccCCcCCCEEEECCC
Confidence 9998754 2 348888887
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=159.49 Aligned_cols=192 Identities=11% Similarity=0.067 Sum_probs=131.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+|+|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999999999999765 34568999999998888754 67
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||..... ......++.+..+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 148 (247)
T 2hq1_A 85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG---------------- 148 (247)
T ss_dssp CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC----------------
Confidence 9999999965210 01223455678899999999998888764 34 47888888644321
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
..+...|+.||...|.+++.+.+ ..++++..++|+.+..+.. +...+.... ....+.+++|+|++
T Consensus 149 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~ 222 (247)
T 2hq1_A 149 --NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI----PLKRFGTPEEVANV 222 (247)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTS----TTSSCBCHHHHHHH
T ss_pred --CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhC----CCCCCCCHHHHHHH
Confidence 12346799999999999988643 3478999999999987631 111121111 11357899999999
Q ss_pred HHHHHhcC---C-CceeEccCCC
Q 005818 579 SVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~---~-~g~yn~~~~~ 597 (676)
++.++..+ . +.+||+.++.
T Consensus 223 ~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 223 VGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHcCcccccccCcEEEeCCCc
Confidence 99988653 2 3489998864
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-17 Score=161.66 Aligned_cols=194 Identities=16% Similarity=0.116 Sum_probs=145.5
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTG 444 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 444 (676)
.++++|+||||+|+||++++++|+++|++| ..+..|++|.++++++++.+ ++|+|||+||...
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 345689999999999999999999999987 34557899999999888765 6899999999642
Q ss_pred CC--CcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 445 RP--NVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 445 ~~--~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
.. ......++....+++|+.|+.++++++... +.++|++||...+. +..+...|+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~s 161 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN------------------RTSGMIAYGAT 161 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc------------------CCCCCchhHHH
Confidence 11 122334566788999999999999999874 34788888876552 22344679999
Q ss_pred HHHHHHHHHHccCe-----EEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc-C----CCc
Q 005818 520 KAMVEELLKEYDNV-----CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKR-N----LSG 589 (676)
Q Consensus 520 K~~~E~~~~~~~~~-----~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~-~----~~g 589 (676)
|...|.+++.+... .++++..++|+.+..+. ........+ ...+...+|+|++++.++.. . .+.
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~--~~~~~~~~~----~~~~~~~~dva~~i~~l~~~~~~~~~tG~ 235 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT--NRKYMSDAN----FDDWTPLSEVAEKLFEWSTNSDSRPTNGS 235 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH--HHHHCTTSC----GGGSBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc--hhhhccccc----ccccCCHHHHHHHHHHHhcCccccCCcce
Confidence 99999999987543 68999999999998763 222222211 12467899999999999987 2 234
Q ss_pred eeEccCCCcc
Q 005818 590 IWNFTNPGVV 599 (676)
Q Consensus 590 ~yn~~~~~~~ 599 (676)
++++.+++..
T Consensus 236 ~i~v~~g~~~ 245 (251)
T 3orf_A 236 LVKFETKSKV 245 (251)
T ss_dssp EEEEEEETTE
T ss_pred EEEEecCCcc
Confidence 8888776554
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=163.64 Aligned_cols=199 Identities=12% Similarity=0.020 Sum_probs=142.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++|+||||+|+||+++++.|+++|++| ..+.+|++|.++++++++.+ ++|
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 93 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVD 93 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 34568999999988887743 679
Q ss_pred EEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||... .+..+...++....+++|+.++.++++++. +.+ .++|++||...+.
T Consensus 94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 156 (260)
T 2zat_A 94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH----------------- 156 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC-----------------
Confidence 9999999641 111122344556789999999999998875 334 4788888876552
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHH-H-HHhcCceeccCCCccchhhHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FIT-K-ISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~-~-~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
+..+...|+.||...|.+.+.+.. ..++++..++|+.+..+.. ... . .............+.+++|+|++++
T Consensus 157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~ 235 (260)
T 2zat_A 157 -PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVS 235 (260)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 123346799999999999988643 3479999999999987631 100 0 0000000011235789999999999
Q ss_pred HHHhcC----CCceeEccCCCccc
Q 005818 581 EMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 581 ~~~~~~----~~g~yn~~~~~~~s 600 (676)
.++..+ .+.+|++.+|..+|
T Consensus 236 ~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 236 FLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHcCcccCCccCCEEEECCCcccc
Confidence 998754 23499999987765
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-17 Score=162.78 Aligned_cols=200 Identities=14% Similarity=0.067 Sum_probs=145.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------------------eeccccCCChHHHHH
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------------EYGKGRLENRSQLLA 426 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------------~~~~~Dl~d~~~~~~ 426 (676)
..++++||||+|+||++++++|+++|++| .++.+|++|++++++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 34689999999999999999999999765 234679999999998
Q ss_pred Hhhcc-----CCCEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCC
Q 005818 427 DIQNV-----KPTHVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKH 495 (676)
Q Consensus 427 ~~~~~-----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~ 495 (676)
+++.+ ++|++||+||..... ..+...++.+..+++|+.|+.++++++.. . +.++|++||...+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----- 163 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS----- 163 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC-----
Confidence 88755 689999999975211 12233455667899999999999998633 3 35788888876552
Q ss_pred CCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH---HHHHHH----hcC-----
Q 005818 496 PEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FITKIS----RYN----- 560 (676)
Q Consensus 496 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~~~~~----~~~----- 560 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+++|.. +..... ...
T Consensus 164 -------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 230 (281)
T 3s55_A 164 -------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDV 230 (281)
T ss_dssp -------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHH
T ss_pred -------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHH
Confidence 223447899999999999988643 3589999999999998741 110000 000
Q ss_pred -----ceeccCCCccchhhHHHHHHHHHhcCC----CceeEccCCCccc
Q 005818 561 -----KVVNIPNSMTILDELLPISVEMAKRNL----SGIWNFTNPGVVS 600 (676)
Q Consensus 561 -----~~~~~~~~~~~v~D~a~~~~~~~~~~~----~g~yn~~~~~~~s 600 (676)
........+.+++|+|++++.++.... +.++++.+|...+
T Consensus 231 ~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 231 ESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 001122468899999999999987642 3499999887654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-17 Score=159.65 Aligned_cols=191 Identities=15% Similarity=0.068 Sum_probs=139.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999865 23568999999999888754 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||...... .....++.+..+++|+.++.++++++.+. + .++|++||...+..
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 144 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----------------- 144 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------------
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC-----------------
Confidence 9999999652111 11233455678999999999999988653 4 47888888755421
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.||...|.+++.+.+. .++++..++|+.++++.. +...+.... ....+.+++|+|+++
T Consensus 145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~ 219 (244)
T 1edo_A 145 -NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI----PLGRTGQPENVAGLV 219 (244)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC----TTCSCBCHHHHHHHH
T ss_pred -CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcC----CCCCCCCHHHHHHHH
Confidence 123467999999999988876432 479999999999998741 111111111 113578999999999
Q ss_pred HHHHhcC-----CCceeEccCCC
Q 005818 580 VEMAKRN-----LSGIWNFTNPG 597 (676)
Q Consensus 580 ~~~~~~~-----~~g~yn~~~~~ 597 (676)
+.++.++ .+.+|++.++.
T Consensus 220 ~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 220 EFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHhCCCccCCcCCCEEEeCCCc
Confidence 9998443 23488888764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=160.65 Aligned_cols=191 Identities=12% Similarity=0.024 Sum_probs=136.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------ee-ccccCCChHHHHHHhhcc-----CC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EY-GKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~-~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
++|+||||+|+||++++++|+++|++| .. +.+|++|.++++++++.. ++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 589999999999999999999999765 12 678999999988887643 57
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHH----HHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADV----CRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a----~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .....++.+..+++|+.++.+++++ +++.+ .++|++||...+..
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 145 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG---------------- 145 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC----------------
Confidence 99999999652101 1223345567899999996665554 44455 47788888754421
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
..+...|+.||...|.+++.+.+. .++++..++|+.++++.. +...+.... ....+.+++|+|++
T Consensus 146 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~ 219 (245)
T 2ph3_A 146 --NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI----PAGRFGRPEEVAEA 219 (245)
T ss_dssp --CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC----TTCSCBCHHHHHHH
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC----CCCCCcCHHHHHHH
Confidence 123467999999999998886432 479999999999998741 111222111 12367899999999
Q ss_pred HHHHHhcC---C-CceeEccCCC
Q 005818 579 SVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~---~-~g~yn~~~~~ 597 (676)
++.++..+ . +.+|++.++.
T Consensus 220 ~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 220 VAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHhCcccccccCCEEEECCCC
Confidence 99998754 2 3488888763
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-17 Score=163.75 Aligned_cols=214 Identities=15% Similarity=0.114 Sum_probs=151.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC---------CCCCCCeEEEEecCCCHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---------SRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---------~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.. .....++.++.+|++|++++.+
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~--~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHP--KLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCS--SSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhh--hhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 44689999999999999999999999 688998888653211 0000 1123468899999999999888
Q ss_pred HHcc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCC
Q 005818 76 ILLT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 76 ~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~ 143 (676)
+++. .++|+|||+||..... .+.+++...+++|+.++.++++++... .+..+||++||...+....
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~-- 196 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW-- 196 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC--
Confidence 8743 2899999999986532 334456788999999999999988432 1257999999976654321
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
..+...|+.+|...+.+++.++.++ ++++.++.||++.... +.+......+
T Consensus 197 ----------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~---------~~~~~~~~~~-------- 249 (346)
T 3kvo_A 197 ----------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA---------AMDMLGGPGI-------- 249 (346)
T ss_dssp ----------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH---------HHHHHCC--C--------
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH---------HHHhhccccc--------
Confidence 1124569999999999999988875 7999999999643221 1222111111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC--CCceEEEcC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE--VGHVYNIGT 253 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~ 253 (676)
...+...+|+|++++.++.... .|+.+ +.+
T Consensus 250 -~~r~~~pedvA~~v~~L~s~~~~itG~~i-vdg 281 (346)
T 3kvo_A 250 -ESQCRKVDIIADAAYSIFQKPKSFTGNFV-IDE 281 (346)
T ss_dssp -GGGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred -cccCCCHHHHHHHHHHHHhcCCCCCceEE-ECC
Confidence 1135678999999999997632 34444 543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-17 Score=162.12 Aligned_cols=200 Identities=13% Similarity=0.118 Sum_probs=143.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 93 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 93 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999754 34678999999998887763 46
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... .....++.+..+++|+.++.++++++... + .++|++||...+... ...
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 162 (265)
T 1h5q_A 94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-----------QSS 162 (265)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------EEE
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc-----------ccc
Confidence 99999999752111 11233455677899999999999988653 2 578888887654221 001
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
..+..+...|+.||...|.+++.+.. ..++++..++|+.++++.. +...+.... ....+.+++|+|+
T Consensus 163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~ 238 (265)
T 1h5q_A 163 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNI----PLNRFAQPEEMTG 238 (265)
T ss_dssp TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC----TTSSCBCGGGGHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcC----cccCCCCHHHHHH
Confidence 11234457899999999999988643 3479999999999998741 112221111 1135789999999
Q ss_pred HHHHHHhcC----CCceeEccCCCc
Q 005818 578 ISVEMAKRN----LSGIWNFTNPGV 598 (676)
Q Consensus 578 ~~~~~~~~~----~~g~yn~~~~~~ 598 (676)
+++.++..+ .+.+|++.++..
T Consensus 239 ~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 239 QAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHHhhccCchhcCcCcEEEecCCEe
Confidence 999998654 235899988754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.4e-17 Score=159.94 Aligned_cols=193 Identities=13% Similarity=0.057 Sum_probs=140.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999765 34568999999988888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... .....++.+..+++|+.++.++++++... ..++|++||...+.
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~---------------- 150 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI---------------- 150 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----------------
Confidence 99999999652111 12233455678999999999998887653 35788888865431
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H------HHHHHhcCceeccCCCccchhhH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------ITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+..+.+.|+.||...|.+++.+.. ..++++.+++|+.++++.. . ...+... . ....+.+++|+
T Consensus 151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~dv 224 (261)
T 1gee_A 151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM---I-PMGYIGEPEEI 224 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT---C-TTSSCBCHHHH
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc---C-CCCCCcCHHHH
Confidence 224457899999999998877642 3479999999999998842 1 1111111 1 11357899999
Q ss_pred HHHHHHHHhcC---C-CceeEccCCCc
Q 005818 576 LPISVEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 576 a~~~~~~~~~~---~-~g~yn~~~~~~ 598 (676)
|++++.++... . +.++++.++..
T Consensus 225 a~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 225 AAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 99999998653 2 34888888754
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.1e-17 Score=158.71 Aligned_cols=195 Identities=15% Similarity=0.112 Sum_probs=144.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI 89 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999754 45778999999999888754 67
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|++||+||.... +......++.+..+++|+.++.++++++... + .++|++||...+.
T Consensus 90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 152 (262)
T 3pk0_A 90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------------- 152 (262)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-----------------
Confidence 999999996521 1112234455677999999999999988664 4 5788888865320
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
.+..+...|+.||...+.+.+.+... .++++..++|+.++++. .+...+....+ ...+...+|+|++
T Consensus 153 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~p~dva~~ 228 (262)
T 3pk0_A 153 TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIP----AGALGTPEDIGHL 228 (262)
T ss_dssp BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTST----TSSCBCHHHHHHH
T ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCC----CCCCcCHHHHHHH
Confidence 01234477999999999999886433 58999999999999874 22222222211 1246789999999
Q ss_pred HHHHHhcC---CC-ceeEccCCCcc
Q 005818 579 SVEMAKRN---LS-GIWNFTNPGVV 599 (676)
Q Consensus 579 ~~~~~~~~---~~-g~yn~~~~~~~ 599 (676)
++.++... .+ .++++.++...
T Consensus 229 v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 229 AAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHhCccccCCcCCEEEECCCeec
Confidence 99998654 23 48888887554
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.72 E-value=6e-17 Score=159.34 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=142.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 445 (676)
.++|+||||+|+||++++++|+++|++| ..+.+|++|.+.+.++++.+ ++|+|||+||....
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~ 107 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR 107 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 4689999999999999999999999877 23468999999888877654 67999999997631
Q ss_pred CC-cchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 446 PN-VDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 446 ~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
.. .....++.+..+++|+.|+.++++++ ++.+ .++|++||...+. +..+...|+.|
T Consensus 108 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~as 169 (266)
T 3uxy_A 108 GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR------------------PGPGHALYCLT 169 (266)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB------------------CCTTBHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC------------------CCCCChHHHHH
Confidence 11 12233455677899999999999998 3433 5788888876542 22344679999
Q ss_pred HHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH-----------HHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 520 KAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-----------TKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 520 K~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-----------~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
|...+.+.+.+.. ..++++..++|+.++.+.. .. ..+... .....+..++|+|++++.++
T Consensus 170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~pedvA~~v~~L~ 245 (266)
T 3uxy_A 170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT----VPLGRIAEPEDIADVVLFLA 245 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT----STTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc----CCCCCCcCHHHHHHHHHHHh
Confidence 9999999988643 3489999999999998741 11 111111 11125778999999999998
Q ss_pred hcC---C-CceeEccCCCccc
Q 005818 584 KRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 584 ~~~---~-~g~yn~~~~~~~s 600 (676)
... . +.++++.+|..++
T Consensus 246 s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 246 SDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp SGGGTTCCSCEEEESTTCCCC
T ss_pred CchhcCCcCCEEEECcCEeCC
Confidence 754 2 3489998876543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-17 Score=160.87 Aligned_cols=195 Identities=14% Similarity=0.060 Sum_probs=139.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 445 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+|||+||....
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~ 87 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESY 87 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 4689999999999999999999999876 35678999999999888754 57999999996521
Q ss_pred CC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 446 PN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 446 ~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
.. .....++....+++|+.|+.++++++... + .++|++||...+. +..+...|+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~s 149 (264)
T 2dtx_A 88 GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI------------------ITKNASAYVTS 149 (264)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS------------------CCTTBHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc------------------CCCCchhHHHH
Confidence 11 11234456678999999999999988653 3 5788888876542 12334679999
Q ss_pred HHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHH-----------HHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 520 KAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT-----------KISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 520 K~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~-----------~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
|...|.+++.+.. .. +++..++|+.+..+. .+.. .....-........+.+++|+|++++.++
T Consensus 150 K~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (264)
T 2dtx_A 150 KHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLA 228 (264)
T ss_dssp HHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999888632 23 899999999998773 1110 00000000011235789999999999998
Q ss_pred hcC---C-CceeEccCCC
Q 005818 584 KRN---L-SGIWNFTNPG 597 (676)
Q Consensus 584 ~~~---~-~g~yn~~~~~ 597 (676)
..+ . +.++++.++.
T Consensus 229 s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 229 SREASFITGTCLYVDGGL 246 (264)
T ss_dssp SGGGTTCCSCEEEESTTG
T ss_pred CchhcCCCCcEEEECCCc
Confidence 754 2 3478887764
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-17 Score=160.57 Aligned_cols=194 Identities=14% Similarity=0.075 Sum_probs=138.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-CCCEEEECc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAA 440 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a 440 (676)
..++|+||||+|+||+++++.|+++|++| .++.+|++|.+++.++++.. ++|+|||+|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 34689999999999999999999999865 56678999999999998865 679999999
Q ss_pred cccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 441 GVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|..... ......++.+..+++|+.++.++++++.. .+ .++|++||...+.. ..+..
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~ 154 (249)
T 3f9i_A 93 GITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG------------------NPGQA 154 (249)
T ss_dssp C-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C------------------CSCSH
T ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC------------------CCCCc
Confidence 965211 11234456678899999999999988743 23 47888888766531 23346
Q ss_pred chhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 515 FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.|+.||...|.+++.+.. ..++++..++|+.+..+. .....+.... ....+.+++|+|++++.++..
T Consensus 155 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~s~ 230 (249)
T 3f9i_A 155 NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKI----PLGTYGIPEDVAYAVAFLASN 230 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHC----TTCSCBCHHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHcCC
Confidence 799999999999887642 357999999999998763 1122222211 123678899999999999975
Q ss_pred C----CCceeEccCCCc
Q 005818 586 N----LSGIWNFTNPGV 598 (676)
Q Consensus 586 ~----~~g~yn~~~~~~ 598 (676)
+ .+.++++.++..
T Consensus 231 ~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 231 NASYITGQTLHVNGGML 247 (249)
T ss_dssp GGTTCCSCEEEESTTSS
T ss_pred ccCCccCcEEEECCCEe
Confidence 4 235899888653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.3e-17 Score=160.10 Aligned_cols=198 Identities=12% Similarity=0.042 Sum_probs=142.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------eeccccCCChHHHHHHhhcc-----CCCEEEECcccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVT 443 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~ 443 (676)
..++|+||||+|+||++++++|+++|++| ..+.+|++|+++++++++.+ ++|+|||+||..
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 44689999999999999999999999876 45679999999999888755 689999999975
Q ss_pred CCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 444 GRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
.... .....++....+++|+.|+.++++++.. .+ .++|++||...+. +..+...|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~ 154 (269)
T 3vtz_A 93 QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA------------------ATKNAAAYV 154 (269)
T ss_dssp CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------BCTTCHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc------------------CCCCChhHH
Confidence 2111 1122334456789999999999998754 23 4788888876652 123346799
Q ss_pred hhHHHHHHHHHHccCeE--EEEeeecccCCCCChHH--HHHHH-----------HhcCceeccCCCccchhhHHHHHHHH
Q 005818 518 KTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN--FITKI-----------SRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~--~~~~~-----------~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
.||...+.+.+.+...+ ++++..++|+.+..+.. ..... ...-........+.+++|+|++++.+
T Consensus 155 asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 234 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFL 234 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999998864322 79999999999998742 11100 00000001123577899999999999
Q ss_pred HhcC---C-CceeEccCCCc
Q 005818 583 AKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 583 ~~~~---~-~g~yn~~~~~~ 598 (676)
+... . +.++++.+|..
T Consensus 235 ~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 235 ASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hCCccCCCcCcEEEECCCcc
Confidence 8754 2 34899888743
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=157.04 Aligned_cols=226 Identities=15% Similarity=0.074 Sum_probs=157.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.|++|||||++.||+++++.|+++ +.+|++.+|.........-.......++..+++|++|+++++++++.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999 78899998864221100000112345789999999999998877633
Q ss_pred CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+-+...
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~-------- 153 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFA-------- 153 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSS--------
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCC--------
Confidence 379999999996532 345567889999999999998877653 23 368999999765433222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC-hHHHHHHHHHCCCCceeecCCCceEee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|.....+.+.++.++ |+++..+-||.|-.+...... .-....+......+ +. + .+
T Consensus 154 ------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~-~------R~ 219 (254)
T 4fn4_A 154 ------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-LS-S------RL 219 (254)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-TC-C------CC
T ss_pred ------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-CC-C------CC
Confidence 3469999999999988877764 899999999999776431111 00011111111000 00 0 24
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+|+|.++++++... -.|+.+.+.+|-
T Consensus 220 g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 220 AEPEDIANVIVFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence 56799999999988543 267889888774
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-17 Score=160.59 Aligned_cols=191 Identities=13% Similarity=0.152 Sum_probs=118.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999755 46789999999999888755 679
Q ss_pred EEEECccccCCCC----cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 435 HVFNAAGVTGRPN----VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 435 ~Vih~a~~~~~~~----~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|||+||..+... .....++....+++|+.++.++.+++. +.+ .++|++||...|.
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 153 (253)
T 3qiv_A 89 YLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL--------------- 153 (253)
T ss_dssp EEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred EEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---------------
Confidence 9999999631001 112334556789999999777766653 333 4788888876651
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhH
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+.+.|+.||...|.+++.+.. ..++++..++|+.++++.. +...+....+ ...+..++|+
T Consensus 154 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dv 223 (253)
T 3qiv_A 154 ------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLP----LSRMGTPDDL 223 (253)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHH
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCC----CCCCCCHHHH
Confidence 225699999999999888643 3489999999999987731 1111111111 1245678999
Q ss_pred HHHHHHHHhcC----CCceeEccCCCcc
Q 005818 576 LPISVEMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 576 a~~~~~~~~~~----~~g~yn~~~~~~~ 599 (676)
|++++.++... .+.+|++.++..+
T Consensus 224 a~~~~~l~s~~~~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 224 VGMCLFLLSDEASWITGQIFNVDGGQII 251 (253)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEC------
T ss_pred HHHHHHHcCccccCCCCCEEEECCCeec
Confidence 99999998654 2359999887654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.5e-17 Score=159.01 Aligned_cols=194 Identities=12% Similarity=0.068 Sum_probs=143.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999754 45678999999999888776 78
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... +......++.+..+++|+.|+.++++++.. .+ .++|++||...+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 146 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR----------------- 146 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS-----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC-----------------
Confidence 999999996421 111223344567799999999999998843 23 4788888875542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchhhHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+. .+........+ ...+..++|+|
T Consensus 147 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p----~~r~~~~~dva 221 (258)
T 3oid_A 147 -YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP----AGRMVEIKDMV 221 (258)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT----TSSCBCHHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC----CCCCcCHHHHH
Confidence 223457899999999999988643 347999999999998763 12222222211 23577899999
Q ss_pred HHHHHHHhcC---C-CceeEccCCCcc
Q 005818 577 PISVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 577 ~~~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
++++.++... . +.++++.+|...
T Consensus 222 ~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 222 DTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp HHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred HHHHHHhCcccCCccCCEEEECCCccC
Confidence 9999998754 2 348998887543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=166.80 Aligned_cols=209 Identities=11% Similarity=0.111 Sum_probs=148.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee------------------------------------eccccCCChHHHHH
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE------------------------------------YGKGRLENRSQLLA 426 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~Dl~d~~~~~~ 426 (676)
..++|+||||+|+||++++++|+++|++|. ++.+|++|++++++
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 346899999999999999999999998663 35689999999988
Q ss_pred Hhhcc-----CCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCC
Q 005818 427 DIQNV-----KPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEG 498 (676)
Q Consensus 427 ~~~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~ 498 (676)
+++.+ ++|+|||+||..... .....++.+..+++|+.|+.++++++... +.++|++||...+......+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-- 165 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP-- 165 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred HHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc--
Confidence 88754 679999999976211 12334556788999999999999999875 35788888876664332222
Q ss_pred CCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH----HHHHHHhc------------
Q 005818 499 TGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN----FITKISRY------------ 559 (676)
Q Consensus 499 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~----~~~~~~~~------------ 559 (676)
..+..+..+...|+.||...+.+.+.+... .++++..++|+.+..+.. ........
T Consensus 166 -----~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T 3pxx_A 166 -----GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA 240 (287)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred -----cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence 222223334467999999999999886433 389999999999987631 11111000
Q ss_pred -CceeccCCCccchhhHHHHHHHHHhcC---C-CceeEccCCCcc
Q 005818 560 -NKVVNIPNSMTILDELLPISVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 560 -~~~~~~~~~~~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
......+..+.+++|+|++++.++... . +.++++.+|...
T Consensus 241 ~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~ 285 (287)
T 3pxx_A 241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285 (287)
T ss_dssp GGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence 001112246789999999999998643 2 348898887654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=7.9e-18 Score=168.10 Aligned_cols=203 Identities=13% Similarity=0.064 Sum_probs=145.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC---CCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---SRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++++|...... .+.. .....++.++.+|++|.+++.++++.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQ--KVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHH--HHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 55689999999999999999999999 688999988642111 0000 00123688999999999998877743
Q ss_pred ---CCCCEEEEc-cccCCcC---CcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 ---EKIDTIMHF-AAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ---~~~d~Vih~-a~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|+|||+ |+..... .+.+++...+++|+.++.++++++...- ...+||++||...+.+..
T Consensus 102 ~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 172 (286)
T 1xu9_A 102 KLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP--------- 172 (286)
T ss_dssp HHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT---------
T ss_pred HHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC---------
Confidence 379999999 5654321 2334456789999999999998875420 136999999977654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
+...|+.+|...|.+++.++.+. ++++++++||.+..+.. .....+ .....
T Consensus 173 -----~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~----------~~~~~~---------~~~~~ 228 (286)
T 1xu9_A 173 -----MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA----------MKAVSG---------IVHMQ 228 (286)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH----------HHHSCG---------GGGGG
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH----------HHhccc---------cccCC
Confidence 24579999999999998877654 89999999999875421 111111 01124
Q ss_pred eeeHHHHHHHHHHHHhcCC
Q 005818 226 YLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~ 244 (676)
+++.+|+|++++.+++.+.
T Consensus 229 ~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 229 AAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp CBCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHhcCC
Confidence 6889999999999998654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=158.96 Aligned_cols=196 Identities=15% Similarity=0.106 Sum_probs=140.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 101 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999765 34678999999998888754 579
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------C-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------G-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|||+||...... .+...++....+++|+.|+.++++++... + .++|++||...+.
T Consensus 102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------- 165 (277)
T 2rhc_B 102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------- 165 (277)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc----------------
Confidence 9999999652111 11223445678899999999999987654 3 4788888865441
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHh------cC--c-ee--ccCCCcc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISR------YN--K-VV--NIPNSMT 570 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~------~~--~-~~--~~~~~~~ 570 (676)
+..+...|+.||...+.+.+.+. ...++++..++|+.++++. .+...... .. . .. .....+.
T Consensus 166 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 243 (277)
T 2rhc_B 166 --GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYV 243 (277)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCB
T ss_pred --CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCc
Confidence 12334679999999999988863 2358999999999999874 11110000 00 0 00 1123688
Q ss_pred chhhHHHHHHHHHhcC---CC-ceeEccCCC
Q 005818 571 ILDELLPISVEMAKRN---LS-GIWNFTNPG 597 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~~-g~yn~~~~~ 597 (676)
+++|+|++++.++..+ .. .++++.++.
T Consensus 244 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 244 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 9999999999998754 23 488888763
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.9e-17 Score=159.66 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=137.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 86 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI 86 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999999999999999999999765 34668999999999888743 57
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcCC-cEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .+...++....+++|+.++.++++++ ++.+. ++|++||...+.+
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------- 150 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG---------------- 150 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC----------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC----------------
Confidence 99999999652111 12233455678999999997776655 34454 6777777654421
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
..+...|+.+|...|.+++.+.+ ..++++.+++|+.++++.. +...+.... ....+.+++|+|++
T Consensus 151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~ 224 (248)
T 2pnf_A 151 --NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQI----PLGRFGSPEEVANV 224 (248)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC----TTSSCBCHHHHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcC----CCCCccCHHHHHHH
Confidence 12346799999999999887642 3479999999999998741 111111111 12357899999999
Q ss_pred HHHHHhcC---C-CceeEccCC
Q 005818 579 SVEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~-~g~yn~~~~ 596 (676)
++.++... . +.+|++.++
T Consensus 225 ~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 225 VLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhhcCCCcEEEeCCC
Confidence 99998653 2 348998876
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=159.38 Aligned_cols=194 Identities=15% Similarity=0.084 Sum_probs=140.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv 86 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLV 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 34678999999999888743 579999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++....+++|+.|+.++++++ ++.+ .++|++||...+.. ..
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~ 148 (260)
T 1nff_A 87 NNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG------------------TV 148 (260)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------------CT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC------------------CC
Confidence 9999652111 11233455678999999997766655 3444 47888888765521 12
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCceec-cCCCccchhhHHHHHHHHHhcC-
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVN-IPNSMTILDELLPISVEMAKRN- 586 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~v~D~a~~~~~~~~~~- 586 (676)
+...|+.||...|.+.+.+.. ..++++..++|+.++++..- ........ ....+.+.+|+|++++.++...
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 149 ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPEDIFQTALGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchhhHHhCccCCCCCHHHHHHHHHHHhCccc
Confidence 346799999999999988643 35899999999999988421 11111101 1125778999999999998653
Q ss_pred --C-CceeEccCCCcc
Q 005818 587 --L-SGIWNFTNPGVV 599 (676)
Q Consensus 587 --~-~g~yn~~~~~~~ 599 (676)
. +.+|++.++...
T Consensus 225 ~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 225 SYSTGAEFVVDGGTVA 240 (260)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred cCCcCCEEEECCCeec
Confidence 2 348999887543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-17 Score=159.94 Aligned_cols=210 Identities=15% Similarity=0.098 Sum_probs=148.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecC--CCHHHHHHHHcc-
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDV--ASADLVHFILLT- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl--~d~~~~~~~~~~- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... .+.+. .....++.++.+|+ .|.+++.++++.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIK-SAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHH-hcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 55789999999999999999999999 678999988642211 00000 11124677888888 899888777643
Q ss_pred ----CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|+|||+||.... ..+.+++...+++|+.++.++++++. +.+ ..++|++||...+.+..
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----- 162 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA----- 162 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT-----
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC-----
Confidence 289999999998532 22445667889999999999999884 333 57999999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
+...|+.+|...+.+++.++.+ .++++..+.||.+..+. .........
T Consensus 163 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~----------~~~~~~~~~--------- 214 (247)
T 3i1j_A 163 ---------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM----------RAQAYPDEN--------- 214 (247)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH----------HHHHSTTSC---------
T ss_pred ---------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc----------chhcccccC---------
Confidence 2346999999999999988776 36889999999886531 111111111
Q ss_pred eEeeeeHHHHHHHHHHHHhcCC---CCceEEE
Q 005818 223 VRSYLYCEDVAEAFDTILHKGE---VGHVYNI 251 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i 251 (676)
...+...+|++++++.++.... .|+.+++
T Consensus 215 ~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 215 PLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp GGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred ccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 1135567999999999986432 4555543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-17 Score=162.63 Aligned_cols=197 Identities=17% Similarity=0.112 Sum_probs=144.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
..++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 44689999999999999999999999754 45678999999999888755 6
Q ss_pred CCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 433 PTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 433 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|+|||+||.... +-.....++.+..+++|+.|+.++++++... +.++|++||...+..
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------- 189 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG---------------- 189 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC----------------
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC----------------
Confidence 7999999996521 1111234556788999999999999999874 347888888876631
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH-HHHH-hcCceeccCCCccchhhHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-TKIS-RYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-~~~~-~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
..+...|+.||...|.+++.+.. ..++++..++|+.++.+.. .. .... ..... .....+...+|+|++++
T Consensus 190 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dvA~~v~ 266 (291)
T 3ijr_A 190 --NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSN-VPMQRPGQPYELAPAYV 266 (291)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTT-STTSSCBCGGGTHHHHH
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHcc-CCCCCCcCHHHHHHHHH
Confidence 12346799999999999988643 3489999999999998741 00 0000 00011 11235778999999999
Q ss_pred HHHhcC---C-CceeEccCCCc
Q 005818 581 EMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 581 ~~~~~~---~-~g~yn~~~~~~ 598 (676)
.++... . +.++++.+|..
T Consensus 267 ~L~s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 267 YLASSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp HHHSGGGTTCCSCEEEESSSCC
T ss_pred HHhCCccCCCcCCEEEECCCcc
Confidence 998654 2 34888887644
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-17 Score=158.10 Aligned_cols=194 Identities=14% Similarity=0.019 Sum_probs=140.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhc------cCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQN------VKP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~------~~~ 433 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++. -++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 3467899999998888753 267
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... +..+...++....+++|+.|+.++++++. +.+ .++|++||...+.
T Consensus 89 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 151 (260)
T 2ae2_A 89 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----------------- 151 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------------
Confidence 999999996521 11122334556789999999999999884 334 4788888875442
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H------HH---HHHhcCceeccCCCccchh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------IT---KISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~---~~~~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...|.+.+.+.. ..++++..++|+.+..+.. + .. .+... . ....+.+++
T Consensus 152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 226 (260)
T 2ae2_A 152 -AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR---C-ALRRMGEPK 226 (260)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT---S-TTCSCBCHH
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc---C-CCCCCCCHH
Confidence 123346799999999999988643 3479999999999988731 1 00 11111 0 113578999
Q ss_pred hHHHHHHHHHhcC---CC-ceeEccCCCcc
Q 005818 574 ELLPISVEMAKRN---LS-GIWNFTNPGVV 599 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~-g~yn~~~~~~~ 599 (676)
|+|++++.++..+ .. .++++.++...
T Consensus 227 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 227 ELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 9999999988653 23 48888887544
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.8e-17 Score=159.45 Aligned_cols=198 Identities=12% Similarity=0.113 Sum_probs=142.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc-----CCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a 440 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+|||+|
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A 85 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA 85 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4689999999999999999999999876 24578999999998888754 679999999
Q ss_pred cccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 441 GVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 441 ~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
|...... .....++....+++|+.|+.++++++.. .+ .++|++||...+. +..+..
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~ 147 (256)
T 2d1y_A 86 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------------------AEQENA 147 (256)
T ss_dssp CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------------BCTTBH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC------------------CCCCCh
Confidence 9652111 1122344567899999999999998854 23 4788888875442 112346
Q ss_pred chhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHH----H-hcCc--ee---ccCCCccchhhHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKI----S-RYNK--VV---NIPNSMTILDELLPISVE 581 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~----~-~~~~--~~---~~~~~~~~v~D~a~~~~~ 581 (676)
.|+.||...|.+.+.+.. ..++++..++|+.+..+.. ... . .... .. .....+.+++|+|++++.
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 225 (256)
T 2d1y_A 148 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh--hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 799999999999988642 3479999999999988731 111 1 1110 00 011357899999999999
Q ss_pred HHhcC---CCc-eeEccCCCcccH
Q 005818 582 MAKRN---LSG-IWNFTNPGVVSH 601 (676)
Q Consensus 582 ~~~~~---~~g-~yn~~~~~~~s~ 601 (676)
++..+ ..| +|++.++...++
T Consensus 226 l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 226 LASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HhCchhcCCCCCEEEECCCccccc
Confidence 98764 234 899998866544
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=5e-17 Score=161.64 Aligned_cols=198 Identities=14% Similarity=0.110 Sum_probs=144.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee------------------------------------eccccCCChHHHHH
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE------------------------------------YGKGRLENRSQLLA 426 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~------------------------------------~~~~Dl~d~~~~~~ 426 (676)
..++++||||+|+||+++++.|+++|++|. ++.+|++|++++++
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 346899999999999999999999997653 45689999999998
Q ss_pred Hhhcc-----CCCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCC
Q 005818 427 DIQNV-----KPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKH 495 (676)
Q Consensus 427 ~~~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~ 495 (676)
+++.+ ++|+|||+||.. ......++....+++|+.|+.++++++... +.++|++||...+.+.
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~---~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 165 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIA---PMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV--- 165 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCC---CCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHHcCCCCEEEECCCCC---CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC---
Confidence 88754 679999999976 223345667788999999999999987542 3578888887655221
Q ss_pred CCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH---H----HHHHHHhcCcee--
Q 005818 496 PEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR---N----FITKISRYNKVV-- 563 (676)
Q Consensus 496 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~---~----~~~~~~~~~~~~-- 563 (676)
..+..+...|+.||...+.+++.+.. ..++++..++|+.++.+. . ++..........
T Consensus 166 -----------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 234 (278)
T 3sx2_A 166 -----------GSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234 (278)
T ss_dssp -----------CCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred -----------ccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence 01112346799999999999988642 346999999999999874 1 122111111100
Q ss_pred ---ccCCCccchhhHHHHHHHHHhcC---C-CceeEccCCC
Q 005818 564 ---NIPNSMTILDELLPISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 564 ---~~~~~~~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
.....+..++|+|++++.++... . +.++++.+|.
T Consensus 235 ~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 235 MGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp TSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 11136778999999999998654 2 3488888764
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=161.17 Aligned_cols=191 Identities=13% Similarity=0.007 Sum_probs=133.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC--Cce---------------------eeccccCCChHHHHHHhhcc-------CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG--IPF---------------------EYGKGRLENRSQLLADIQNV-------KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g--~~v---------------------~~~~~Dl~d~~~~~~~~~~~-------~~ 433 (676)
+++|+||||+|+||++++++|+++| ++| .++.+|++|+++++++++.+ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 4689999999999999999999999 654 45678999999998888744 57
Q ss_pred CEEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc----------------CCcEEEeecCeeeecCCCC
Q 005818 434 THVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCREN----------------GLLMMNYATGCIFEYDAKH 495 (676)
Q Consensus 434 d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----------------~~~~v~~sS~~v~~~~~~~ 495 (676)
|+|||+||... .+......++....+++|+.++.++++++... ..++|++||...+....
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-- 160 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN-- 160 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC--
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc--
Confidence 99999999652 11122234456678999999999999887543 45788888876653211
Q ss_pred CCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccch
Q 005818 496 PEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 496 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 572 (676)
....+..+...|+.||...|.+++.+.+. .++++..++|+.+..+.. . . ..++..
T Consensus 161 ---------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~----~-------~~~~~~ 218 (250)
T 1yo6_A 161 ---------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG--G----K-------NAALTV 218 (250)
T ss_dssp ---------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred ---------ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC--C----C-------CCCCCH
Confidence 01112245578999999999999886433 479999999999986531 1 0 146789
Q ss_pred hhHHHHHHHHHhcC---CCceeEccCCCc
Q 005818 573 DELLPISVEMAKRN---LSGIWNFTNPGV 598 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g~yn~~~~~~ 598 (676)
+|+|+.++.++... ..|.|...++..
T Consensus 219 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 219 EQSTAELISSFNKLDNSHNGRFFMRNLKP 247 (250)
T ss_dssp HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred HHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence 99999999999765 346555444433
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=157.97 Aligned_cols=194 Identities=12% Similarity=0.084 Sum_probs=142.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~----~~d~V 436 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|.++++++.+.. ++|+|
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l 110 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL 110 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence 4689999999999999999999999765 45779999999888775432 67999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||...... .....++....+++|+.|+.++++++.. .+ .++|++||...+. +.
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~------------------~~ 172 (273)
T 3uf0_A 111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ------------------GG 172 (273)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CC
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC------------------CC
Confidence 99999753111 1223445567899999999999998733 33 4788888876552 22
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
.+...|+.||...+.+.+.+.. ..++++..++|+.++.+.. ....+.... ....+..++|+|+++
T Consensus 173 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedva~~v 248 (273)
T 3uf0_A 173 RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARI----PAGRWATPEDMVGPA 248 (273)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHS----TTSSCBCGGGGHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcC----CCCCCCCHHHHHHHH
Confidence 3346799999999999988643 3589999999999998742 111112111 123577899999999
Q ss_pred HHHHhcC---C-CceeEccCCCcc
Q 005818 580 VEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 580 ~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
+.++... . +.++++.+|...
T Consensus 249 ~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 249 VFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHhCchhcCCcCCEEEECcCccC
Confidence 9998753 2 348998887554
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.1e-18 Score=166.31 Aligned_cols=208 Identities=10% Similarity=0.038 Sum_probs=138.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee-----------ccccCCChHHHHHHhhcc--CCCEEEECccccCCCCcch
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY-----------GKGRLENRSQLLADIQNV--KPTHVFNAAGVTGRPNVDW 450 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~-----------~~~Dl~d~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~ 450 (676)
|++|+||||+|+||+++++.|+++|++|.. +.+|++|.++++++++.+ ++|+|||+||.. ..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~---~~-- 75 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG---PQ-- 75 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC---TT--
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC---CC--
Confidence 357999999999999999999999998733 457899999999998765 679999999965 10
Q ss_pred hccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccc-----------cCCCCCCCC
Q 005818 451 CETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKE-----------EDKPNFTGS 514 (676)
Q Consensus 451 ~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~-----------e~~~~~p~~ 514 (676)
....+..+++|+.++.++++++.. .+ .++|++||...+..+...+. ....+.. +..+..+..
T Consensus 76 -~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 1fjh_A 76 -TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNP-LALALEAGEEAKARAIVEHAGEQGGNL 153 (257)
T ss_dssp -CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCT-THHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred -cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccch-hhhhhcccchhhhhhhhhcccCCCCcc
Confidence 133678899999999999998863 33 58899998877632111100 0000000 001223446
Q ss_pred chhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH--HHHHHHhcCcee----ccCCCccchhhHHHHHHHHHhc
Q 005818 515 FYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNKVV----NIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.|+.||...|.+++.+... .++++..++|+.+.++.. ...... ..... .....+.+.+|+|++++.++..
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 232 (257)
T 1fjh_A 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR-YGESIAKFVPPMGRRAEPSEMASVIAFLMSP 232 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh-HHHHHHhcccccCCCCCHHHHHHHHHHHhCc
Confidence 7999999999999887433 579999999999987631 101000 00000 1112578899999999999875
Q ss_pred C---CCc-eeEccCCCcc
Q 005818 586 N---LSG-IWNFTNPGVV 599 (676)
Q Consensus 586 ~---~~g-~yn~~~~~~~ 599 (676)
+ ..| .+++.++...
T Consensus 233 ~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 233 AASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp GGTTCCSCEEEESTTHHH
T ss_pred hhcCCcCCEEEECCCccc
Confidence 4 234 7777776443
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-17 Score=160.35 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=135.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 108 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRI 108 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4589999999999999999999999754 45778999999999888755 67
Q ss_pred CEEEECccccC---CCCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCC
Q 005818 434 THVFNAAGVTG---RPNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 434 d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
|+|||+||..+ .+..+...++.+..+++|+.|+.++++++... +.++|++||...+..
T Consensus 109 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------- 177 (280)
T 4da9_A 109 DCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT----------- 177 (280)
T ss_dssp CEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------------
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-----------
Confidence 99999999731 11112234556678899999999999987653 347888888766521
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHhcCce-eccCCCccchhhHH
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKV-VNIPNSMTILDELL 576 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~-~~~~~~~~~v~D~a 576 (676)
..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. +.......... ......+...+|+|
T Consensus 178 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 250 (280)
T 4da9_A 178 -------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIG 250 (280)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHH
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHH
Confidence 12346799999999999988642 3589999999999987731 11100000000 01112567899999
Q ss_pred HHHHHHHhcCC----CceeEccCCCcc
Q 005818 577 PISVEMAKRNL----SGIWNFTNPGVV 599 (676)
Q Consensus 577 ~~~~~~~~~~~----~g~yn~~~~~~~ 599 (676)
++++.++.... +.++++.+|..+
T Consensus 251 ~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 251 NIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp HHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred HHHHHHhCccccCCCCCEEEECCCccc
Confidence 99999987542 348888887543
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5e-16 Score=155.90 Aligned_cols=227 Identities=15% Similarity=0.035 Sum_probs=148.3
Q ss_pred CCCCeEEEEcCC--chhHHHHHHHHHHcCCCcEEEEEcCCC------------ccccccCCCCCCCCCCeEEEEecC---
Q 005818 5 YTPKNILITGAA--GFIASHVCNRLIGNYPEYKIVVLDKLD------------YCSNLKNLNPSRLSPNFKFIKGDV--- 67 (676)
Q Consensus 5 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~~~v~~~~r~~------------~~~~~~~~~~~~~~~~v~~v~~Dl--- 67 (676)
+++|+||||||+ |+||+++++.|+++ +++|++.+|.. .......+...........+.+|+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence 567899999999 99999999999999 67888876421 001111111000001123444442
Q ss_pred -----C----C--------HHHHHHHHcc-----CCCCEEEEccccCC------cCCcCCChHHHHHHHHHHHHHHHHHH
Q 005818 68 -----A----S--------ADLVHFILLT-----EKIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEAC 119 (676)
Q Consensus 68 -----~----d--------~~~~~~~~~~-----~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a~ 119 (676)
. | ++++.++++. .++|++||+||... .+.+.+++...+++|+.++.++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 2 1 3344444321 37999999998642 22344567789999999999999998
Q ss_pred HHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCCccCCC
Q 005818 120 KITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPN 194 (676)
Q Consensus 120 ~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~l~~~ilR~~~i~G~~ 194 (676)
...- +-.++|++||...+...... ...|+.+|...+.+.+.++.+ +|+++.+++||.+.++.
T Consensus 164 ~~~m~~~g~iv~isS~~~~~~~~~~-------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 164 LPIMNPGGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred HHHhccCceEEEEeccccccCCCCc-------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence 7531 12589999997655332211 135999999999999887664 58999999999999987
Q ss_pred CCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 195 QFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.........+........++ ..+...+|+|++++.++... ..++.+++.+|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 231 AKAIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp SSCCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhhccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 54322333333332222111 13568899999999988642 257789998874
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=158.73 Aligned_cols=197 Identities=14% Similarity=0.077 Sum_probs=145.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999755 56778999999999888754 679
Q ss_pred EEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||..+. +......++.+..+++|+.|+.++++++... +.++|++||...+..
T Consensus 88 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 151 (280)
T 3tox_A 88 TAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA---------------- 151 (280)
T ss_dssp EEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------------
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------------
Confidence 99999996521 1112334556688999999999999987543 347888888765410
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHH----------HHHHHHhcCceeccCCCccchhh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN----------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~----------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+...|+.||...+.+.+.+... .++++..++|+.+..|.. ....+.... ....+..++|
T Consensus 152 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~ped 226 (280)
T 3tox_A 152 -GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH----ALKRIARPEE 226 (280)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS----TTSSCBCHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC----ccCCCcCHHH
Confidence 1233477999999999999886433 479999999999987631 111111111 1125778999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCCcccH
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPGVVSH 601 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~~~s~ 601 (676)
+|++++.++... . +.++++.+|..++.
T Consensus 227 vA~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 227 IAEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 999999998764 2 34999998876654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-17 Score=161.30 Aligned_cols=195 Identities=12% Similarity=0.060 Sum_probs=143.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+++++||||+|+||+++++.|+++|++| ..+.+|++|.++++++++.+ ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999865 45678999999999888754 67
Q ss_pred CEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||..... ......++.+..+++|+.|+.++++++.. .+.++|++||...+.
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 169 (270)
T 3ftp_A 107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----------------- 169 (270)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------------
Confidence 9999999965211 11223455667899999999999998853 235788888876552
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+.... ....+...+|+|++
T Consensus 170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~ 244 (270)
T 3ftp_A 170 -GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQI----PLGRLGSPEDIAHA 244 (270)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTC----TTCSCBCHHHHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcC----CCCCCCCHHHHHHH
Confidence 112346799999999998887643 3579999999999987731 111111111 12357789999999
Q ss_pred HHHHHhcC----CCceeEccCCCcc
Q 005818 579 SVEMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 579 ~~~~~~~~----~~g~yn~~~~~~~ 599 (676)
++.++... .+.++++.+|..+
T Consensus 245 v~~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 245 VAFLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHhCCCcCCccCcEEEECCCccc
Confidence 99988643 2348999887654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.3e-17 Score=158.78 Aligned_cols=196 Identities=12% Similarity=0.073 Sum_probs=144.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 34689999999999999999999999754 56789999999999888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc----C-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN----G-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .+...++.+..+++|+.|+.++++++... + .++|++||...+.
T Consensus 105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~----------------- 167 (271)
T 4ibo_A 105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL----------------- 167 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------------
T ss_pred CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------------
Confidence 99999999752111 12234555678999999999998877543 3 4788888865431
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H------HHHHHhcCceeccCCCccchhhHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------ITKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+.. + ...+....+ ...+...+|+|
T Consensus 168 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p----~~r~~~pedva 242 (271)
T 4ibo_A 168 -ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTP----AKRWGKPQELV 242 (271)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHST----TCSCBCGGGGH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCC----CCCCcCHHHHH
Confidence 223447799999999999988643 3589999999999998731 1 111221111 13567899999
Q ss_pred HHHHHHHhcC---C-CceeEccCCCccc
Q 005818 577 PISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 577 ~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
++++.++... . +.++++.+|...+
T Consensus 243 ~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 243 GTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHHhCccccCCCCcEEEECCCeecc
Confidence 9999988653 2 3489998876543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.1e-17 Score=157.23 Aligned_cols=197 Identities=14% Similarity=0.094 Sum_probs=134.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee--------------eccccCCChHHHHHHhhcc-----CCCEEEECccccC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE--------------YGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTG 444 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~--------------~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 444 (676)
.|+++||||+|+||+++++.|+++|++|. .+.+|++|+++++++++.+ ++|+|||+||...
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR 86 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 36899999999999999999999998762 3568999999999888754 6799999999652
Q ss_pred C-CCcchhccchhhHHhhhhhhHHHHHHHH----HHc-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 445 R-PNVDWCETHKPETIRTNVVGTLTLADVC----REN-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 445 ~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
. +..+...++.+..+++|+.++.++++++ ++. +.++|++||...+. +..+...|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~ 148 (250)
T 2fwm_X 87 MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT------------------PRIGMSAYGA 148 (250)
T ss_dssp CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------------CCTTCHHHHH
T ss_pred CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC------------------CCCCCchHHH
Confidence 1 1112234556678999999999999988 333 35788888876542 2234478999
Q ss_pred hHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH-HHHHhcCcee---------ccCCCccchhhHHHHHHHHH
Q 005818 519 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-TKISRYNKVV---------NIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 519 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-~~~~~~~~~~---------~~~~~~~~v~D~a~~~~~~~ 583 (676)
||...|.+.+.+.. ..++++..++|+.++++.. .. ..-....... .....+...+|+|++++.++
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (250)
T 2fwm_X 149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence 99999999988643 3489999999999998741 10 0000000000 01124678999999999998
Q ss_pred hcC---CC-ceeEccCCCc
Q 005818 584 KRN---LS-GIWNFTNPGV 598 (676)
Q Consensus 584 ~~~---~~-g~yn~~~~~~ 598 (676)
..+ .. .++++.++..
T Consensus 229 s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 229 SDLASHITLQDIVVDGGST 247 (250)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CccccCCCCCEEEECCCcc
Confidence 754 23 4888877643
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.3e-17 Score=159.64 Aligned_cols=214 Identities=11% Similarity=0.032 Sum_probs=142.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.|++++||||||+|+||+++++.|+++ +++|++.+|...... .... .....++.++.+|++|++++.++++.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLR--VVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHH--HHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 366789999999999999999999999 688888888642110 0000 00124688999999999998777632
Q ss_pred ----CCCCEEEEccc--cC-------C--cCCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCC
Q 005818 80 ----EKIDTIMHFAA--QT-------H--VDNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGET 140 (676)
Q Consensus 80 ----~~~d~Vih~a~--~~-------~--~~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~ 140 (676)
.++|++||+|| .. . .+.+.+++...++.|+.++.++.+++. +.+ ..+||++||...+...
T Consensus 78 ~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~ 156 (260)
T 2qq5_A 78 REQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM 156 (260)
T ss_dssp HHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC
T ss_pred HhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC
Confidence 47899999994 21 1 123445667888899999988776654 333 5799999997765321
Q ss_pred CCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceee
Q 005818 141 DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH 217 (676)
Q Consensus 141 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (676)
+...|+.+|...+.+++.++.+ +|+++.+++||.+..+.... ....- ...........
T Consensus 157 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~--~~~~~~~~~~~ 217 (260)
T 2qq5_A 157 ---------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE--HMAKE--EVLQDPVLKQF 217 (260)
T ss_dssp ---------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------
T ss_pred ---------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH--hhccc--cccchhHHHHH
Confidence 2346999999999999988765 48999999999998875321 11000 00000000000
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+ ...+...+|+|++++.++..+
T Consensus 218 ~~~--~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 218 KSA--FSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCT
T ss_pred Hhh--hccCCCHHHHHHHHHHHhcCc
Confidence 000 002357899999999998754
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.4e-17 Score=160.06 Aligned_cols=195 Identities=9% Similarity=0.032 Sum_probs=143.5
Q ss_pred ccEEEEEcCC--cchhHHHHHHHHHcCCcee-----------------------eccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRT--GWIGGLLSKICEKKGIPFE-----------------------YGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~--G~iG~~l~~~L~~~g~~v~-----------------------~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+ |+||++++++|+++|++|. ++.+|++|+++++++++.+ ++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999 9999999999999998762 4568999999999888754 57
Q ss_pred CEEEECccccCC-----CCcc-hhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 434 THVFNAAGVTGR-----PNVD-WCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 434 d~Vih~a~~~~~-----~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
|+|||+||.... +..+ ...++.+..+++|+.++.++++++... +.++|++||...+.
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-------------- 154 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-------------- 154 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------------
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc--------------
Confidence 999999996521 0011 233456678999999999999999775 34788888865542
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.++++.. +...+....+ ...+.+++
T Consensus 155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 226 (265)
T 1qsg_A 155 ----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP----IRRTVTIE 226 (265)
T ss_dssp ----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST----TSSCCCHH
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCC----CCCCCCHH
Confidence 112346799999999999988643 3489999999999998731 1111221111 12467899
Q ss_pred hHHHHHHHHHhcC----CCceeEccCCCccc
Q 005818 574 ELLPISVEMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 574 D~a~~~~~~~~~~----~~g~yn~~~~~~~s 600 (676)
|+|++++.++... .+.+|++.++...+
T Consensus 227 dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 227 DVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 9999999998653 23489998876544
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=160.43 Aligned_cols=197 Identities=15% Similarity=0.128 Sum_probs=143.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|+||
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 106 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLV 106 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999765 55789999999999888755 689999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++.+..+++|+.|+.++++++.. .+ .++|++||...+. +..
T Consensus 107 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~ 168 (277)
T 4dqx_A 107 NNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS------------------AIA 168 (277)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS------------------CCT
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc------------------CCC
Confidence 9999652111 1222345567789999999999998854 22 4788888876542 223
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHh-cCce---------eccCCCccchhhHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISR-YNKV---------VNIPNSMTILDELLPI 578 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~-~~~~---------~~~~~~~~~v~D~a~~ 578 (676)
+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. ..... .... ......+..++|+|++
T Consensus 169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 246 (277)
T 4dqx_A 169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYF--TKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchh--hhhcccccchhHHHHHHHhcCcccCCcCHHHHHHH
Confidence 447899999999999988643 3479999999999998741 11111 0000 0112256789999999
Q ss_pred HHHHHhcC----CCceeEccCCCccc
Q 005818 579 SVEMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 579 ~~~~~~~~----~~g~yn~~~~~~~s 600 (676)
++.++... .+.++++.+|..++
T Consensus 247 v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 247 MLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHHHhCCccCCCcCCEEEECCchhhh
Confidence 99998654 23489998876554
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=157.20 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=144.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
..++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999754 56789999999999888765 78
Q ss_pred CEEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|++||+||... .+..+...++....+++|+.++.++++++.. .+.++|++||...+.
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 152 (264)
T 3ucx_A 90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH----------------- 152 (264)
T ss_dssp SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC-----------------
T ss_pred cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc-----------------
Confidence 99999998641 1111233455667899999999999988743 356888998876542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcC-----------ceeccCCCccc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYN-----------KVVNIPNSMTI 571 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~-----------~~~~~~~~~~~ 571 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+++|. .+........ ........+..
T Consensus 153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 231 (264)
T 3ucx_A 153 -SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPT 231 (264)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCB
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCC
Confidence 223346799999999999988643 257999999999999884 2211110000 00011125778
Q ss_pred hhhHHHHHHHHHhcC---C-CceeEccCCCc
Q 005818 572 LDELLPISVEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~-~g~yn~~~~~~ 598 (676)
.+|+|++++.++... . +.++++.+|..
T Consensus 232 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 232 EDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 999999999998653 2 34888888754
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.5e-17 Score=158.99 Aligned_cols=195 Identities=12% Similarity=0.036 Sum_probs=143.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999754 55779999999999888765 689
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||...... .....++....+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------ 146 (247)
T 3lyl_A 85 ILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA------------------ 146 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc------------------
Confidence 9999999752111 1223445567899999999999998754 23 4788888876552
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-----HHHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+. .......... .....+.+++|+|++++
T Consensus 147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~~i~ 223 (247)
T 3lyl_A 147 GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATK---IPSGQIGEPKDIAAAVA 223 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTT---STTCCCBCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhc---CCCCCCcCHHHHHHHHH
Confidence 123347799999999988887642 357999999999998763 1111111111 11236789999999999
Q ss_pred HHHhcC----CCceeEccCCCcc
Q 005818 581 EMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 581 ~~~~~~----~~g~yn~~~~~~~ 599 (676)
.++... .+.++++.+|..+
T Consensus 224 ~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 224 FLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHhCCCcCCccCCEEEECCCEec
Confidence 998654 2358999887543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-17 Score=163.72 Aligned_cols=206 Identities=13% Similarity=0.021 Sum_probs=141.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-CCCEEEECcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAG 441 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~ 441 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++|+|||+||
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg 95 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAG 95 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCc
Confidence 4689999999999999999999999754 56779999999999999865 6799999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhH
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTK 520 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK 520 (676)
... +......++.+..+++|+.|+.++++++..... ++|++||...+.+..... .+..+..+..+...|+.||
T Consensus 96 ~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~-----~~~~~~~~~~~~~~Y~~sK 169 (291)
T 3rd5_A 96 IMA-VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE-----DLNWRSRRYSPWLAYSQSK 169 (291)
T ss_dssp CCS-CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS-----CTTCSSSCCCHHHHHHHHH
T ss_pred CCC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc-----cccccccCCCCcchHHHHH
Confidence 763 122334566778899999999999999988754 677888876664321111 1122333445557899999
Q ss_pred HHHHHHHHHccCe-----EEEEeeecccCCCCChH--HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC-CCc-ee
Q 005818 521 AMVEELLKEYDNV-----CTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN-LSG-IW 591 (676)
Q Consensus 521 ~~~E~~~~~~~~~-----~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~~g-~y 591 (676)
...+.+++.+.+. .++++..+.|+.+..+. .................-....+|+|++++.++..+ .+| .+
T Consensus 170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~ 249 (291)
T 3rd5_A 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFV 249 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCcee
Confidence 9999999886432 23999999999887652 111100000000011112235899999999998875 345 55
Q ss_pred EccC
Q 005818 592 NFTN 595 (676)
Q Consensus 592 n~~~ 595 (676)
++.+
T Consensus 250 ~vdg 253 (291)
T 3rd5_A 250 GPRF 253 (291)
T ss_dssp EETT
T ss_pred CCcc
Confidence 5543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=156.88 Aligned_cols=193 Identities=16% Similarity=0.070 Sum_probs=137.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
..++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34689999999999999999999999754 56789999999999888754 67999
Q ss_pred EECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||..... ......++....+++|+.|+.++.+++. +.+ .++|++||...+.. .
T Consensus 106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~------------------~ 167 (266)
T 3grp_A 106 VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG------------------N 167 (266)
T ss_dssp EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC------------------C
Confidence 9999965211 1223345566789999999877777663 334 47888888765521 1
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
.+...|+.||...+.+.+.+.. ..++++..++|+.+..+. .....+....+ ...+...+|+|++++.
T Consensus 168 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~~edvA~~v~~ 243 (266)
T 3grp_A 168 PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIP----MKRMGIGEEIAFATVY 243 (266)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCT----TCSCBCHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCC----CCCCcCHHHHHHHHHH
Confidence 2346799999999998887642 347999999999999873 12222222111 1356789999999999
Q ss_pred HHhcC----CCceeEccCCC
Q 005818 582 MAKRN----LSGIWNFTNPG 597 (676)
Q Consensus 582 ~~~~~----~~g~yn~~~~~ 597 (676)
++... .+.++++.+|.
T Consensus 244 L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 244 LASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHSGGGTTCCSCEEEESTTC
T ss_pred HhCccccCccCCEEEECCCe
Confidence 88654 23488888764
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-17 Score=161.57 Aligned_cols=198 Identities=13% Similarity=0.089 Sum_probs=144.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
..++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34689999999999999999999999765 45678999999999888765 78999
Q ss_pred EECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||..... -.+...++.+..+++|+.|+.++++++.. . +.++|++||...+. +.
T Consensus 108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------------------~~ 169 (277)
T 3gvc_A 108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------------------AV 169 (277)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------------CC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------------------CC
Confidence 9999975211 11233455667899999999999998854 2 24788888865441 22
Q ss_pred CCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhc-C-c----e-----eccCCCccchhhHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY-N-K----V-----VNIPNSMTILDELL 576 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~-~-~----~-----~~~~~~~~~v~D~a 576 (676)
.+...|+.||...+.+.+.+.. ..++++..++|+.+++|.. ...... . . . ......+...+|+|
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 247 (277)
T 3gvc_A 170 GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ--QTAMAMFDGALGAGGARSMIARLQGRMAAPEEMA 247 (277)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHTCC------CCHHHHHHHHHSSCBCHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH--HHhhhcchhhHHHHhhhhhhhccccCCCCHHHHH
Confidence 3446899999999999987632 3589999999999998742 111110 0 0 0 01112577899999
Q ss_pred HHHHHHHhcC---C-CceeEccCCCccc
Q 005818 577 PISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 577 ~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
++++.++... . +.++++.+|...+
T Consensus 248 ~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 248 GIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred HHHHHHcCCccCCccCcEEEECCcchhc
Confidence 9999998654 2 3489988876544
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-16 Score=159.69 Aligned_cols=196 Identities=13% Similarity=0.075 Sum_probs=143.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.+++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ +
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999999999754 45779999999998888765 7
Q ss_pred CCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||...... .....++.+..+++|+.|+.++++++. +.+ .++|++||...+..
T Consensus 120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~--------------- 184 (293)
T 3rih_A 120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT--------------- 184 (293)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC---------------
Confidence 899999999752111 122345566789999999999999883 333 58888888653200
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.++++.. +...+....+ ...+...+|+|+
T Consensus 185 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~p~dvA~ 258 (293)
T 3rih_A 185 --GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIP----MGMLGSPVDIGH 258 (293)
T ss_dssp --BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTST----TSSCBCHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCC----CCCCCCHHHHHH
Confidence 112347899999999999988643 3589999999999998841 2222222211 123567899999
Q ss_pred HHHHHHhcC---C-CceeEccCCCcc
Q 005818 578 ISVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 578 ~~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
+++.++... . +.++++.+|..+
T Consensus 259 ~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 259 LAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHHhCccccCCCCCEEEECCCccC
Confidence 999988653 2 348888887554
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=157.96 Aligned_cols=195 Identities=14% Similarity=0.069 Sum_probs=139.3
Q ss_pred CccEEEEEcCCc-chhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTG-WIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G-~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
..++|+||||+| .||++++++|+++|++| .++.+|++|.++++++++.+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 346899999998 59999999999999754 56789999999999888765
Q ss_pred CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----C-CcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----G-LLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~-~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|+|||+||...... .+...++.+..+++|+.++.++++++... + .++|++||...+.
T Consensus 101 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 166 (266)
T 3o38_A 101 RLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-------------- 166 (266)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC--------------
T ss_pred CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC--------------
Confidence 7899999999752111 12233455678999999999999998764 2 4677777765441
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCc-----eeccCCCccchhhHH
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-----VVNIPNSMTILDELL 576 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~v~D~a 576 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+.. ........ .......+.+.+|+|
T Consensus 167 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~r~~~~~dva 240 (266)
T 3o38_A 167 ----AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFL--EKTSSSELLDRLASDEAFGRAAEPWEVA 240 (266)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTSSCCCHHHHH
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhh--hccCcHHHHHHHHhcCCcCCCCCHHHHH
Confidence 223457899999999999988643 3589999999999987631 11110000 001123577899999
Q ss_pred HHHHHHHhcC---C-CceeEccCCC
Q 005818 577 PISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 577 ~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
++++.++... . +.++++.+|.
T Consensus 241 ~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 241 ATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHHHcCccccCccCCEEEEcCCc
Confidence 9999998753 2 3488887763
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=156.56 Aligned_cols=210 Identities=16% Similarity=0.185 Sum_probs=147.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC---------CCCCCCeEEEEecCCCHHHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP---------SRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---------~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
+++|+||||||+|+||+++++.|+++ +++|++.+|...... .+.. .....++.++++|++|++++.+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANP--KLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCT--TSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhh--hhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 56789999999999999999999999 678999888653211 1100 0113468899999999999888
Q ss_pred HHcc-----CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCC
Q 005818 76 ILLT-----EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 76 ~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~ 143 (676)
+++. .++|++||+||..... .+.+++...+++|+.++.++.+++... .+..++|++||...+....
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-- 157 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-- 157 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC--
Confidence 7743 3899999999986432 344556788899999999999887532 1246999999976654310
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
..+...|+.+|...+.+++.++.++ |+++.++.||.+..... . . ...+.+
T Consensus 158 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~-----~----~-~~~~~~------- 210 (274)
T 3e03_A 158 ----------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA-----I----N-MLPGVD------- 210 (274)
T ss_dssp ----------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CCC-------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch-----h----h-hccccc-------
Confidence 0113469999999999999887764 89999999995432211 1 0 011111
Q ss_pred CceEeeeeHHHHHHHHHHHHhcCC---CCceE
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKGE---VGHVY 249 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y 249 (676)
...+...+|+|++++.++.... .|+.+
T Consensus 211 --~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 211 --AAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp --GGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred --ccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 1125678999999999997543 34545
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.3e-17 Score=161.81 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=144.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
.+++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34689999999999999999999999754 45678999999988887754
Q ss_pred CCCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 432 KPTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 432 ~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
++|+|||+||.... +-.+...++.+..+++|+.|+.++++++... +.++|++||...+.
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~---------------- 191 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ---------------- 191 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS----------------
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc----------------
Confidence 67999999996521 1112234555678999999999999999775 34788888876652
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCcee------ccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVV------NIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~v~D~a~ 577 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.++.+...-. ....... .....+...+|+|+
T Consensus 192 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~p~~r~~~p~dvA~ 267 (294)
T 3r3s_A 192 --PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--GQTQDKIPQFGQQTPMKRAGQPAELAP 267 (294)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT--TSCGGGSTTTTTTSTTSSCBCGGGGHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc--CCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 123346799999999999988643 3489999999999998742100 0000000 01125678999999
Q ss_pred HHHHHHhcC----CCceeEccCCCcc
Q 005818 578 ISVEMAKRN----LSGIWNFTNPGVV 599 (676)
Q Consensus 578 ~~~~~~~~~----~~g~yn~~~~~~~ 599 (676)
+++.++... .+.++++.+|..+
T Consensus 268 ~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 268 VYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHHhCccccCCCCCEEEECCCccC
Confidence 999998654 2358999887654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.9e-17 Score=162.21 Aligned_cols=186 Identities=12% Similarity=0.090 Sum_probs=130.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhcc----
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
++|+||||+|+||+++++.|+++|++| ..+.+|++|+++++++++..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999865 34678999999999988854
Q ss_pred -CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 -KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|+|||+||.... |......++....+++|+.|+.++++++ ++.+ .++|++||+..+..
T Consensus 86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~------------- 152 (324)
T 3u9l_A 86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG------------- 152 (324)
T ss_dssp SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC-------------
Confidence 67999999996521 1112233445677899999999999998 4444 47888888765421
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHHHH------------HHHhcCc--------
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFIT------------KISRYNK-------- 561 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~------------~~~~~~~-------- 561 (676)
+....+.|+.||...|.+.+.+... .++++..++|+.+.++..+.. .......
T Consensus 153 ----~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (324)
T 3u9l_A 153 ----TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIK 228 (324)
T ss_dssp ----CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHH
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHH
Confidence 1122367999999999999887433 589999999999975532111 0000000
Q ss_pred -ee-ccCCCccchhhHHHHHHHHHhcCC
Q 005818 562 -VV-NIPNSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 562 -~~-~~~~~~~~v~D~a~~~~~~~~~~~ 587 (676)
.. ........++|+|++++.+++.+.
T Consensus 229 ~~~~~l~~~~~~p~~vA~aiv~~~~~~~ 256 (324)
T 3u9l_A 229 KAFAAIVPPDADVSLVADAIVRVVGTAS 256 (324)
T ss_dssp HHHHHTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence 00 011133578999999999998773
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-17 Score=160.30 Aligned_cols=211 Identities=15% Similarity=0.088 Sum_probs=145.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHH---cCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIG---NYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~---~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+++++||||||+|+||+++++.|++ + +++|++.+|...... ...+.......++.++.+|++|++++.++++.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 5678999999999999999999999 6 689999988642111 00000000134688999999999998877632
Q ss_pred -------CCCC--EEEEccccCCc--C-----CcCCChHHHHHHHHHHHHHHHHHHHHcC-----CCceEEEEecccccC
Q 005818 80 -------EKID--TIMHFAAQTHV--D-----NSFGNSFEFTKNNIYGTHVLLEACKITG-----QIKRFIHVSTDEVYG 138 (676)
Q Consensus 80 -------~~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-----~~~~~v~~SS~~vyg 138 (676)
.++| +|||+||.... . .+.+++...+++|+.++.++.+++...- ...+||++||...+.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 1578 99999997532 1 2445677899999999999999886531 135799999987764
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCCccCCCCCCCChH-----HHHHHHHHCCC
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPEKLI-----PKFILLAMKGK 212 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~i~G~~~~~~~~~-----~~~~~~~~~~~ 212 (676)
+.. +...|+.+|...+.+++.++.+. ++++.++.||.+-.+... ... ..........
T Consensus 162 ~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~- 224 (259)
T 1oaa_A 162 PYK--------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQ--LARETSKDPELRSKLQKL- 224 (259)
T ss_dssp CCT--------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHH--HHHHHCSCHHHHHHHHHH-
T ss_pred CCC--------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHH--HHhhccCChhHHHHHHHh-
Confidence 322 24569999999999999988876 488888999988543210 000 0000111000
Q ss_pred CceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 213 PLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 213 ~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
.+ ...+...+|+|++++.++..
T Consensus 225 -~p-------~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 225 -KS-------DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp -HH-------TTCSBCHHHHHHHHHHHHHH
T ss_pred -hh-------cCCcCCHHHHHHHHHHHHhh
Confidence 00 11367889999999998864
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.7e-17 Score=159.32 Aligned_cols=196 Identities=15% Similarity=0.115 Sum_probs=139.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ +
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 104 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGG 104 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence 4689999999999999999999999754 45668999999999888754 6
Q ss_pred CCEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||....... +...++....+++|+.|+.++++++. +.+ .++|++||...+.
T Consensus 105 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 168 (281)
T 3v2h_A 105 ADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV---------------- 168 (281)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc----------------
Confidence 7999999997521111 12334556789999999999999873 333 4788888876542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHh-----cCce----e---ccCCCc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR-----YNKV----V---NIPNSM 569 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~-----~~~~----~---~~~~~~ 569 (676)
+......|+.||...+.+++.+.. ..++++..++|+.++.+.. ....... .... . .....+
T Consensus 169 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 246 (281)
T 3v2h_A 169 --ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKF 246 (281)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCc
Confidence 123346799999999999988643 3479999999999998741 1111000 0000 0 112368
Q ss_pred cchhhHHHHHHHHHhcC---C-CceeEccCCC
Q 005818 570 TILDELLPISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
.+++|+|++++.++... . +.++++.+|-
T Consensus 247 ~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 247 ITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp BCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 89999999999998654 2 3488888763
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8e-17 Score=157.87 Aligned_cols=186 Identities=15% Similarity=0.140 Sum_probs=138.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCc-e------------------------eeccccCCCh-HHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIP-F------------------------EYGKGRLENR-SQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~-v------------------------~~~~~Dl~d~-~~~~~~~~~~-----~ 432 (676)
+++|+||||+|+||++++++|+++|++ | .++.+|++|+ ++++++++.+ +
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 84 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999986 4 2356799998 8888777643 6
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|+|||+||.. ..++.+..+++|+.++.++++++... +.++|++||...+.
T Consensus 85 id~lv~~Ag~~-------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 143 (254)
T 1sby_A 85 VDILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-------------- 143 (254)
T ss_dssp CCEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred CCEEEECCccC-------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--------------
Confidence 79999999965 24566788999999999999998643 24688888876552
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHHHHHH---HhcCce---eccCCCccchhhH
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKI---SRYNKV---VNIPNSMTILDEL 575 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~---~~~~~~---~~~~~~~~~v~D~ 575 (676)
+..+...|+.||...|.+++.+... .++++..++|+.+.++.. ... ...... ......+.+++|+
T Consensus 144 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dv 217 (254)
T 1sby_A 144 ----AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV--HTFNSWLDVEPRVAELLLSHPTQTSEQC 217 (254)
T ss_dssp ----CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH--HSCCCGGGSCTTHHHHHTTSCCEEHHHH
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc--cccchhhhhhHHHHHHHhcCCCCCHHHH
Confidence 1223467999999999999886533 589999999999987731 110 000000 0001134589999
Q ss_pred HHHHHHHHhcCCCc-eeEccCC
Q 005818 576 LPISVEMAKRNLSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~~~g-~yn~~~~ 596 (676)
|++++.+++....| +|++.++
T Consensus 218 A~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 218 GQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETT
T ss_pred HHHHHHHHHcCCCCCEEEEeCC
Confidence 99999998765544 8888876
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-17 Score=160.42 Aligned_cols=199 Identities=13% Similarity=-0.006 Sum_probs=145.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
..++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 34689999999999999999999999755 56789999999998887654 67999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
||+||...... .+...++.+..+++|+.|+.++++++... +.++|++||...+. +..+
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~ 148 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG------------------GHPG 148 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS------------------BCTT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC------------------CCCC
Confidence 99999752111 11234555678999999999999999764 34788888876542 1234
Q ss_pred CCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------------HHHHHHhcCceeccCCCccchhhHHH
Q 005818 513 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
...|+.||...+.+.+.+.. ..++++..++|+.+..|.. +........ ....+...+|+|+
T Consensus 149 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~ 224 (255)
T 4eso_A 149 MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT----PMKRNGTADEVAR 224 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS----TTSSCBCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC----CCCCCcCHHHHHH
Confidence 46799999999999888632 3479999999999887621 111111111 1224668999999
Q ss_pred HHHHHHhcC--C-CceeEccCCCcccHHH
Q 005818 578 ISVEMAKRN--L-SGIWNFTNPGVVSHNE 603 (676)
Q Consensus 578 ~~~~~~~~~--~-~g~yn~~~~~~~s~~e 603 (676)
+++.++... . +.++++.+|...++.+
T Consensus 225 ~v~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 225 AVLFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred HHHHHcCcCcCccCCEEEECCCccccCcC
Confidence 999887642 2 3489998887766543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-18 Score=160.96 Aligned_cols=179 Identities=12% Similarity=0.091 Sum_probs=127.4
Q ss_pred cEEEEEcCCcchhHHHHHHHH-HcCCce---------------------eeccccCCChHHHHHHhhccCCCEEEECccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICE-KKGIPF---------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~-~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
++|+||||+|+||+++++.|+ ++|++| .++.+|++|++++.++++++ |+|||+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTC--SEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCC--CEEEEcCCC
Confidence 359999999999999999999 889765 34567999999999999977 999999983
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
. |+. +.++++++++.++ ++|++||..+|...... +.+...+ ...+.|+.+|.
T Consensus 84 ~------------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-------~~~~~~~-~~~~~y~~~K~ 136 (221)
T 3r6d_A 84 S------------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-------LEKWTFD-NLPISYVQGER 136 (221)
T ss_dssp C------------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-------HHHHHHH-TSCHHHHHHHH
T ss_pred C------------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-------ccccccc-ccccHHHHHHH
Confidence 2 334 8999999999886 78888888877432100 0111111 11127999999
Q ss_pred HHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHH--hcCC---CceeEccCC
Q 005818 522 MVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMA--KRNL---SGIWNFTNP 596 (676)
Q Consensus 522 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~--~~~~---~g~yn~~~~ 596 (676)
.+|.+++. .+++++++||+.++++... ...............+++.+|+|++++.++ ..+. .+.+.++++
T Consensus 137 ~~e~~~~~----~~i~~~~vrpg~v~~~~~~-~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~ 211 (221)
T 3r6d_A 137 QARNVLRE----SNLNYTILRLTWLYNDPEX-TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEP 211 (221)
T ss_dssp HHHHHHHH----SCSEEEEEEECEEECCTTC-CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECT
T ss_pred HHHHHHHh----CCCCEEEEechhhcCCCCC-cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCC
Confidence 99999975 4789999999999876210 000000000112235889999999999999 6653 357777765
Q ss_pred C
Q 005818 597 G 597 (676)
Q Consensus 597 ~ 597 (676)
.
T Consensus 212 ~ 212 (221)
T 3r6d_A 212 G 212 (221)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-17 Score=162.67 Aligned_cols=202 Identities=9% Similarity=0.012 Sum_probs=147.8
Q ss_pred CccEEEEEcCC--cchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRT--GWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~--G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
..++|+||||+ |+||++++++|+++|++| .++.+|++|+++++++++.+ +
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999 999999999999999865 45689999999999888765 6
Q ss_pred CCEEEECccccCC-----CCcc-hhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 433 PTHVFNAAGVTGR-----PNVD-WCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 433 ~d~Vih~a~~~~~-----~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
+|+|||+||.... +... ...++....+++|+.++.++++++... +.++|++||...+.
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------------- 159 (271)
T 3ek2_A 93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------------- 159 (271)
T ss_dssp EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------------
T ss_pred CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc-------------
Confidence 7999999997521 1111 334556678999999999999999765 45788888876542
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccch
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v 572 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+. .+...+....+ ...+...
T Consensus 160 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----~~~~~~p 230 (271)
T 3ek2_A 160 -----AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSP----LKRNVTI 230 (271)
T ss_dssp -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHST----TSSCCCH
T ss_pred -----CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCC----cCCCCCH
Confidence 123447899999999999988643 347999999999998653 11222222111 1346789
Q ss_pred hhHHHHHHHHHhcC---C-CceeEccCCCcccHHHHHH
Q 005818 573 DELLPISVEMAKRN---L-SGIWNFTNPGVVSHNEILE 606 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~-~g~yn~~~~~~~s~~e~~~ 606 (676)
+|+|++++.++... . +.++++.+|...++.++++
T Consensus 231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 99999999998753 2 3499999998887766544
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=157.35 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=137.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++|+||
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 88 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILV 88 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3689999999999999999999999754 56789999999999888765 789999
Q ss_pred ECccccCCCC--cchhccchhhHHhhhhhhHHHHHHHHHHc---------CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 438 NAAGVTGRPN--VDWCETHKPETIRTNVVGTLTLADVCREN---------GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 438 h~a~~~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+||....+. .....++....+++|+.++.++++++... +.++|++||...+.
T Consensus 89 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------- 152 (261)
T 3n74_A 89 NNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR---------------- 152 (261)
T ss_dssp ECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----------------
T ss_pred ECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----------------
Confidence 9999752111 11133455677899999999998887543 23588888865441
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhc-Cc---eeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRY-NK---VVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~-~~---~~~~~~~~~~v~D~a~ 577 (676)
+......|+.||...+.+++.+.. ..++++..++|+.+..+. .+....... .. .......+..++|+|+
T Consensus 153 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 230 (261)
T 3n74_A 153 --PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAE 230 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHH
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHH
Confidence 223346799999999999988643 357999999999988763 111100000 00 0011125789999999
Q ss_pred HHHHHHhcC----CCceeEccCCCcccH
Q 005818 578 ISVEMAKRN----LSGIWNFTNPGVVSH 601 (676)
Q Consensus 578 ~~~~~~~~~----~~g~yn~~~~~~~s~ 601 (676)
+++.++... .+.++++.++..++.
T Consensus 231 ~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 231 AAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred HHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 999998643 235999998877654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=156.99 Aligned_cols=194 Identities=15% Similarity=0.042 Sum_probs=142.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 99 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGL 99 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999754 46779999999998888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... .+...++.+..+++|+.++.++++++... +.++|++||...+.
T Consensus 100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 163 (266)
T 4egf_A 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA---------------- 163 (266)
T ss_dssp SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc----------------
Confidence 99999999753111 12233445677899999999999988543 34788888876542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhhH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+.... ....+...+|+
T Consensus 164 --~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~dv 237 (266)
T 4egf_A 164 --PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI----PLGRFAVPHEV 237 (266)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTC----TTSSCBCHHHH
T ss_pred --CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcC----CCCCCcCHHHH
Confidence 223347799999999999888643 3589999999999998741 111111111 11256789999
Q ss_pred HHHHHHHHhcC---C-CceeEccCCCcc
Q 005818 576 LPISVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 576 a~~~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
|++++.++... . +.++++.++...
T Consensus 238 a~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 238 SDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhCchhcCccCcEEEECCCccC
Confidence 99999998753 2 348888887543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=158.63 Aligned_cols=194 Identities=13% Similarity=0.111 Sum_probs=140.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 4689999999999999999999999754 46778999999998888765 689
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH------cC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE------NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~------~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|||+||...... .+...++.+..+++|+.|+.++++++.. .+ .++|++||...+.
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~---------------- 167 (279)
T 3sju_A 104 ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ---------------- 167 (279)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc----------------
Confidence 9999999753111 1122344557789999999999998765 23 4788888876542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcC------------c---eeccCCC
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN------------K---VVNIPNS 568 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~------------~---~~~~~~~ 568 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+.. ....... . .......
T Consensus 168 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 243 (279)
T 3sju_A 168 --GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA--ERVREGYARHWGVTEQEVHERFNAKIPLGR 243 (279)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH--HHHHHSCCSSSCCCHHHHHHHHHTTCTTSS
T ss_pred --CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHH--HHHHhhhhhcccCChHHHHHHHHhcCCCCC
Confidence 223346799999999998887632 3579999999999998731 1111100 0 0011125
Q ss_pred ccchhhHHHHHHHHHhcC---C-CceeEccCCC
Q 005818 569 MTILDELLPISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
+..++|+|++++.++... . +.++++.+|.
T Consensus 244 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 244 YSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp CBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred CCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 678999999999988654 2 3488888764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.8e-17 Score=157.73 Aligned_cols=197 Identities=14% Similarity=0.173 Sum_probs=142.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHH-cCCce--------------eeccccCCChHHHHHHhhcc---CCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEK-KGIPF--------------EYGKGRLENRSQLLADIQNV---KPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~-~g~~v--------------~~~~~Dl~d~~~~~~~~~~~---~~d~Vih~a~~~~~ 445 (676)
|++++||||+|+||++++++|++ .|+.| .++.+|++|+++++++++.. ++|++||+||....
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~ 83 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIK 83 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCC
Confidence 56899999999999999999999 67654 56789999999999888643 57999999997521
Q ss_pred -CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 446 -PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 446 -~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
+..+...++.+..+++|+.|+.++++++... +.++|++||...+. +..+...|+.||.
T Consensus 84 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------~~~~~~~Y~asKa 145 (244)
T 4e4y_A 84 GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI------------------AKPNSFAYTLSKG 145 (244)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC------------------CCTTBHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc------------------CCCCCchhHHHHH
Confidence 1122234555678999999999999998765 24688888876542 1233467999999
Q ss_pred HHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHH-----------hcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 522 MVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKIS-----------RYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 522 ~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~-----------~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
..+.+.+.+.. ..++++..++|+.+..+. .+..... ...........+...+|+|++++.++..
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 225 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcC
Confidence 99999988643 458999999999999874 1211100 0000001112577899999999999875
Q ss_pred C---C-CceeEccCCCc
Q 005818 586 N---L-SGIWNFTNPGV 598 (676)
Q Consensus 586 ~---~-~g~yn~~~~~~ 598 (676)
. . +.++++.+|..
T Consensus 226 ~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 226 KSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp GGTTCCSCEEEESTTGG
T ss_pred ccccccCCeEeECCCcc
Confidence 4 2 34888877643
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=157.95 Aligned_cols=198 Identities=13% Similarity=0.124 Sum_probs=141.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li 91 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAV 91 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3689999999999999999999999765 45678999999999888744 679999
Q ss_pred ECccccCCCCc-------chhccchhhHHhhhhhhHHHHHHHHHHc----------C-CcEEEeecCeeeecCCCCCCCC
Q 005818 438 NAAGVTGRPNV-------DWCETHKPETIRTNVVGTLTLADVCREN----------G-LLMMNYATGCIFEYDAKHPEGT 499 (676)
Q Consensus 438 h~a~~~~~~~~-------~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----------~-~~~v~~sS~~v~~~~~~~~~~~ 499 (676)
|+||....+.. ....++....+++|+.++.++++++... + .++|++||...+.
T Consensus 92 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------- 162 (265)
T 2o23_A 92 NCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE--------- 162 (265)
T ss_dssp ECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH---------
T ss_pred ECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC---------
Confidence 99996521111 1233455678999999999999998764 3 3678888876552
Q ss_pred CCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-HHHHHHhc--CceeccCCCccchh
Q 005818 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-FITKISRY--NKVVNIPNSMTILD 573 (676)
Q Consensus 500 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-~~~~~~~~--~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+.. .+..-... .........+...+
T Consensus 163 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T 2o23_A 163 ---------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPA 233 (265)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHH
T ss_pred ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHH
Confidence 112346799999999998887632 3479999999999987631 11000000 00111123577899
Q ss_pred hHHHHHHHHHhcC-CC-ceeEccCCCcc
Q 005818 574 ELLPISVEMAKRN-LS-GIWNFTNPGVV 599 (676)
Q Consensus 574 D~a~~~~~~~~~~-~~-g~yn~~~~~~~ 599 (676)
|+|++++.++..+ .. .++++.++...
T Consensus 234 dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 234 EYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHhhcCccCceEEEECCCEec
Confidence 9999999998765 23 48888876543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-16 Score=158.36 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=138.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
+++|+||||+|+||+++++.|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999754 35678999999999888643 679
Q ss_pred EEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||..... ..+...++....+++|+.|+.++++++.. .+ .++|++||...+..
T Consensus 124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------------- 186 (285)
T 2c07_A 124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG----------------- 186 (285)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-----------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----------------
Confidence 999999965211 11223455667899999998888887753 34 47888888765521
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
..+...|+.||...|.+++.+.. ..++++.+++|+.+.++.. +...+.... ....+.+++|+|+++
T Consensus 187 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dvA~~~ 261 (285)
T 2c07_A 187 -NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNI----PAGRMGTPEEVANLA 261 (285)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTC----TTSSCBCHHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhC----CCCCCCCHHHHHHHH
Confidence 12346799999999999888643 3479999999999987731 111111111 113578999999999
Q ss_pred HHHHhcC----CCceeEccCCC
Q 005818 580 VEMAKRN----LSGIWNFTNPG 597 (676)
Q Consensus 580 ~~~~~~~----~~g~yn~~~~~ 597 (676)
+.++..+ .+.+|++.++.
T Consensus 262 ~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 262 CFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCCCcCCCCCCEEEeCCCc
Confidence 9998753 23488888764
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-16 Score=153.99 Aligned_cols=227 Identities=13% Similarity=0.070 Sum_probs=158.6
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|+.-++.|++|||||++.||+++++.|++. |.+|++.+|..... +... .....++..+++|++|+++++++++.
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l--~~~~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVL--DAAI-AEIGGGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH-HHcCCCeEEEEecCCCHHHHHHHHHHH
Confidence 344455689999999999999999999999 78899998864211 1111 11245678899999999998877633
Q ss_pred ----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 ----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||...+-+...
T Consensus 98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~-------- 169 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA-------- 169 (273)
T ss_dssp HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT--------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC--------
Confidence 379999999998653 3455678899999999999999887642 11247999999765433222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC---C--hHHHHHHHHHCCCCceeecCCCc
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---K--LIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.+|.....+.+.++.++ |+++..+.||.|-.+..... . ....+.......-++.
T Consensus 170 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg------- 236 (273)
T 4fgs_A 170 ------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG------- 236 (273)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS-------
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC-------
Confidence 3469999999999999888775 79999999999987643110 1 0112222222222211
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
-+...+|+|.++++++... -.|+.+.+.+|.
T Consensus 237 --R~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 237 --RVGRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred --CCcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 2556799999999998543 267888887764
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=154.53 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=138.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.|+|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 84 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV 84 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 34678999999998888743 579999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHH----HHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADV----CRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a----~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++.+..+++|+.++..+.++ +++.+ .++|++||...+. +..
T Consensus 85 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~ 146 (254)
T 1hdc_A 85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------------------GLA 146 (254)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CCT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc------------------CCC
Confidence 9999652111 1223345567899999999855544 44444 4788888876552 113
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhc--Cceec--cCCCcc-chhhHHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY--NKVVN--IPNSMT-ILDELLPISVEMA 583 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~--~~~~~--~~~~~~-~v~D~a~~~~~~~ 583 (676)
+...|+.||...+.+.+.+.. ..++++..++|+.++++.. ...... ..... ....+. +.+|+|++++.++
T Consensus 147 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~ 224 (254)
T 1hdc_A 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT--AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc--cccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence 346899999999999888642 3579999999999998742 111110 00000 012466 8999999999998
Q ss_pred hcC---C-CceeEccCCCc
Q 005818 584 KRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 584 ~~~---~-~g~yn~~~~~~ 598 (676)
..+ . +.++++.++..
T Consensus 225 s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 225 SDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CchhcCCCCCEEEECCCcc
Confidence 754 2 34788877643
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-16 Score=154.97 Aligned_cols=196 Identities=12% Similarity=0.047 Sum_probs=139.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++|+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999755 35678999999999888763 5799
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC--CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||...... .....++....+++|+.++.++.+++. +.+ .++|++||...+.
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 147 (251)
T 1zk4_A 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------------ 147 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc------------------
Confidence 999999652111 112234456789999998888777654 334 3678888876552
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHH-HH-H-HHh-cCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNF-IT-K-ISR-YNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~-~~-~-~~~-~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..+...|+.||...|.+++.+.. ..++++..++|+.++++... +. . ... ..... ....+.+++|+|+++
T Consensus 148 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~ 226 (251)
T 1zk4_A 148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT-PMGHIGEPNDIAYIC 226 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTC-TTSSCBCHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcC-CCCCCcCHHHHHHHH
Confidence 113346899999999999887532 46899999999999988421 00 0 000 00001 113578999999999
Q ss_pred HHHHhcC---C-CceeEccCCCc
Q 005818 580 VEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 580 ~~~~~~~---~-~g~yn~~~~~~ 598 (676)
+.++..+ . +.+|++.++..
T Consensus 227 ~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 227 VYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHcCcccccccCcEEEECCCcc
Confidence 9998654 2 34888888753
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-16 Score=154.35 Aligned_cols=196 Identities=14% Similarity=0.072 Sum_probs=139.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 83 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL 83 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999765 34568999999999888743 57999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHH----HHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVC----RENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||...... .....++.+..+++|+.++.++.+++ ++.+ .++|++||...+. +.
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~ 145 (255)
T 2q2v_A 84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV------------------GS 145 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------------CC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc------------------CC
Confidence 99999652111 11223455678999999888777765 4445 4788888876542 11
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HH---HHH--------Hhc-CceeccCCCccchh
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FI---TKI--------SRY-NKVVNIPNSMTILD 573 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~---~~~--------~~~-~~~~~~~~~~~~v~ 573 (676)
.+...|+.||...+.+.+.+. ...++++..++|+.+++|.. +. ... ... ... .....+.+++
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~ 224 (255)
T 2q2v_A 146 TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK-QPSLAFVTPE 224 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT-CTTCCCBCHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc-CCCCCCcCHH
Confidence 234679999999999988763 23589999999999999842 11 000 000 000 1123688999
Q ss_pred hHHHHHHHHHhcC---C-CceeEccCCCc
Q 005818 574 ELLPISVEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 574 D~a~~~~~~~~~~---~-~g~yn~~~~~~ 598 (676)
|+|++++.++..+ . +.+|++.++..
T Consensus 225 dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 225 HLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 9999999988653 2 34888887743
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=155.15 Aligned_cols=193 Identities=11% Similarity=0.062 Sum_probs=139.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceee-------------ccccCCChHHHHHHhhcc-----CCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEY-------------GKGRLENRSQLLADIQNV-----KPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~-------------~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~~ 445 (676)
+++|+||||+|+||++++++|+++|++|.. +.+|++|+++++++++.+ ++|+|||+||....
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~ 94 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD 94 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 468999999999999999999999998732 568999999998888754 67999999996521
Q ss_pred -CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 446 -PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 446 -~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
+......++.+..+++|+.++.++++++.. .+ .++|++||...+.. ..+...|+.|
T Consensus 95 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~Y~~s 156 (247)
T 1uzm_A 95 AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG------------------IGNQANYAAS 156 (247)
T ss_dssp ----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC------------------CCCChhHHHH
Confidence 011223455668899999999999998854 34 47888888755421 1234679999
Q ss_pred HHHHHHHHHHccC---eEEEEeeecccCCCCChHHH------HHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---C
Q 005818 520 KAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF------ITKISRYNKVVNIPNSMTILDELLPISVEMAKRN---L 587 (676)
Q Consensus 520 K~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~ 587 (676)
|...+.+.+.+.. ..++++..++|+.+..+..- ...+... . ....+.+.+|+|++++.++..+ .
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~-p~~~~~~~~dvA~~~~~l~s~~~~~~ 232 (247)
T 1uzm_A 157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQF---I-PAKRVGTPAEVAGVVSFLASEDASYI 232 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGG---C-TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhc---C-CCCCCcCHHHHHHHHHHHcCccccCC
Confidence 9999998887642 35899999999999877311 1111111 1 1135789999999999998653 2
Q ss_pred C-ceeEccCCCc
Q 005818 588 S-GIWNFTNPGV 598 (676)
Q Consensus 588 ~-g~yn~~~~~~ 598 (676)
. .++++.++..
T Consensus 233 ~G~~i~vdgG~~ 244 (247)
T 1uzm_A 233 SGAVIPVDGGMG 244 (247)
T ss_dssp CSCEEEESTTTT
T ss_pred cCCEEEECCCcc
Confidence 3 4888887754
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8.1e-16 Score=150.20 Aligned_cols=225 Identities=16% Similarity=0.050 Sum_probs=156.9
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.|++|||||+| .||.++++.|+++ |++|++.+|...... ...........++..+++|++|++++.++++.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 5679999999987 8999999999999 788999888643211 11111112234788999999999998777632
Q ss_pred ---CCCCEEEEccccCCcC--------CcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+|+..... ...+++...++.|+.++..+.+++...- +-.++|++||....-...
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~------ 155 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ------ 155 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc------
Confidence 4799999999975421 2223344567888888888887776432 235899999965543222
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+......-.....+......++.
T Consensus 156 --------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~--------- 218 (256)
T 4fs3_A 156 --------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK--------- 218 (256)
T ss_dssp --------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------
T ss_pred --------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------
Confidence 1346999999999998887776 48999999999998765432222334444443332221
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
-+...+|+|.++++++... -.|+.+.+.+|
T Consensus 219 R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 219 RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 2456799999999988542 26788888776
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-16 Score=149.92 Aligned_cols=230 Identities=14% Similarity=0.136 Sum_probs=159.5
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|.=.++.|++|||||++.||+++++.|+++ +.+|++.+|......... .......++.++++|++|++++++++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~ 77 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLD-ALAQRQPRATYLPVELQDDAQCRDAVAQT 77 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHH-HHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHH-HHHhcCCCEEEEEeecCCHHHHHHHHHHH
Confidence 333366799999999999999999999999 788888888653211000 0011245789999999999998777633
Q ss_pred ----CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 ----EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...++.|+.++..+.+++..+ .+-.++|++||...+-+...
T Consensus 78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~-------- 149 (258)
T 4gkb_A 78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN-------- 149 (258)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS--------
T ss_pred HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC--------
Confidence 379999999997542 3455667789999999999988776421 01258999999765533322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCce
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..... ..............++ +
T Consensus 150 ------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g--- 215 (258)
T 4gkb_A 150 ------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----G--- 215 (258)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----T---
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----C---
Confidence 345999999999999888775 489999999999987654210 0001112222222221 1
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+.+...+|+|.++++++... -.|+.+.+.+|-
T Consensus 216 ~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 216 RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 12556799999999988542 267889998774
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=159.92 Aligned_cols=199 Identities=11% Similarity=0.048 Sum_probs=141.3
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhcc--
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNV-- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~-- 431 (676)
..++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.+
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999765 23558999999999888764
Q ss_pred ---CCCEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCC
Q 005818 432 ---KPTHVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 432 ---~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
++|+|||+||..... ......++....+++|+.|+.++++++.. .+.++|++||.. +.
T Consensus 97 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~------------ 163 (303)
T 1yxm_A 97 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA------------ 163 (303)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT------------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc------------
Confidence 579999999954211 11222344567799999999999999765 245788888765 21
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH--HHHHHh--cCceec--cCCCccchh
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--ITKISR--YNKVVN--IPNSMTILD 573 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~~~~~--~~~~~~--~~~~~~~v~ 573 (676)
+..+...|+.+|...+.+.+.+.. ..++++.+++|+.++++..+ ...... ...... ....+.+++
T Consensus 164 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 237 (303)
T 1yxm_A 164 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 237 (303)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH
T ss_pred ------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHH
Confidence 112336799999999998887643 24899999999999998321 000000 000000 112578999
Q ss_pred hHHHHHHHHHhcC---C-CceeEccCCCccc
Q 005818 574 ELLPISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 574 D~a~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
|+|++++.++... . +.++++.++...+
T Consensus 238 dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 9999999998653 2 3489998886654
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=167.75 Aligned_cols=206 Identities=16% Similarity=0.155 Sum_probs=148.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCc-EEEEEcCCCcccc-ccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEY-KIVVLDKLDYCSN-LKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~-~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++||||||+|+||.+++++|+++| . +|++.+|...... ...+. ......++.++.+|++|++++.+++..
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~G--a~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQG--AAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTT--CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCC--CcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999994 5 6777777642211 11110 011245789999999999999998854
Q ss_pred -CCCCEEEEccccC-Cc----CCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQ 153 (676)
Q Consensus 80 -~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 153 (676)
.++|+|||+||.. .. ..+.+++...+++|+.|+++|++++...+ ..+||++||...+-+..+
T Consensus 317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g----------- 384 (496)
T 3mje_A 317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGG----------- 384 (496)
T ss_dssp TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTT-----------
T ss_pred hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCC-----------
Confidence 3689999999987 32 23444566889999999999999998876 789999999554433222
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 154 LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 154 ~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
...|+.+|.+.+.++++++ ..|++++++.||.+.+.+..... .....+.+.. ...+..++.+
T Consensus 385 ---~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~g-----------~~~l~pe~~~ 446 (496)
T 3mje_A 385 ---QPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDP---EVHDRLVRQG-----------VLAMEPEHAL 446 (496)
T ss_dssp ---CHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC---------CHHHHHTT-----------EEEECHHHHH
T ss_pred ---cHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccCh---HHHHHHHhcC-----------CCCCCHHHHH
Confidence 3459999999999998765 56999999999999877653211 1111111111 1356779999
Q ss_pred HHHHHHHhcCC
Q 005818 234 EAFDTILHKGE 244 (676)
Q Consensus 234 ~ai~~~~~~~~ 244 (676)
+++..++..+.
T Consensus 447 ~~l~~~l~~~~ 457 (496)
T 3mje_A 447 GALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHcCCC
Confidence 99999998764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=157.24 Aligned_cols=194 Identities=16% Similarity=0.055 Sum_probs=143.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 107 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRL 107 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999755 45778999999999888755 68
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .....++.+..+++|+.|+.++++++.. . +.++|++||...+..
T Consensus 108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 171 (269)
T 4dmm_A 108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG---------------- 171 (269)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC----------------
Confidence 99999999752111 1223455567899999999999998743 2 357888888765421
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHH-HHHhcCceeccCCCccchhhHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT-KISRYNKVVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~-~~~~~~~~~~~~~~~~~v~D~a~~~~~ 581 (676)
..+...|+.||...+.+.+.+.. ..++++..++|+.+..+. .... .+.... ....+...+|+|++++.
T Consensus 172 --~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~----p~~r~~~~~dvA~~v~~ 245 (269)
T 4dmm_A 172 --NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVI----PLGRYGEAAEVAGVVRF 245 (269)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGC----TTSSCBCHHHHHHHHHH
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcC----CCCCCCCHHHHHHHHHH
Confidence 12346799999999988887642 357999999999998773 2221 121111 11357789999999999
Q ss_pred HHhcC----C-CceeEccCCCcc
Q 005818 582 MAKRN----L-SGIWNFTNPGVV 599 (676)
Q Consensus 582 ~~~~~----~-~g~yn~~~~~~~ 599 (676)
++..+ . +.++++.+|..+
T Consensus 246 l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 246 LAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp HHHCGGGGGCCSCEEEESTTSCC
T ss_pred HhCCcccCCCcCCEEEECCCeec
Confidence 98763 2 348999887654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=157.18 Aligned_cols=191 Identities=13% Similarity=0.079 Sum_probs=140.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 105 (267)
T 4iiu_A 26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAW 105 (267)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 3589999999999999999999999754 45678999999999888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH------HcCCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR------ENGLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~------~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... .....++.+..+++|+.++.++++++. +.+.++|++||...+.
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 169 (267)
T 4iiu_A 106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM---------------- 169 (267)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH----------------
T ss_pred cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc----------------
Confidence 99999999752111 122345566789999999999999873 3345788888876552
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-----HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+. ..........+ ...+...+|+|++
T Consensus 170 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p----~~~~~~~edva~~ 243 (267)
T 4iiu_A 170 --GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIP----MKRMGQAEEVAGL 243 (267)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCT----TCSCBCHHHHHHH
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCC----CCCCcCHHHHHHH
Confidence 123347799999988888777532 347999999999998763 23333332222 1246789999999
Q ss_pred HHHHHhcC---C-CceeEccCC
Q 005818 579 SVEMAKRN---L-SGIWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~-~g~yn~~~~ 596 (676)
++.++... . +.++++.+|
T Consensus 244 ~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 244 ASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCCcccCccCCEEEeCCC
Confidence 99998753 2 348887765
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=154.36 Aligned_cols=196 Identities=15% Similarity=0.096 Sum_probs=139.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-CCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~ 443 (676)
.|+++||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|+|||+||..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~ 85 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFV 85 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccC
Confidence 4689999999999999999999999765 34578999999998777654 679999999965
Q ss_pred CCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 444 GRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
.... .+...++.+..+++|+.++.++++++.. .+ .++|++||...+... ..+...|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------------~~~~~~Y~ 148 (246)
T 2ag5_A 86 HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG-----------------VVNRCVYS 148 (246)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-----------------CTTBHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC-----------------CCCCccHH
Confidence 2111 1122344557789999999999998753 33 478888887544210 11346799
Q ss_pred hhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH--HH------HHHh-cCceeccCCCccchhhHHHHHHHHHhc
Q 005818 518 KTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--IT------KISR-YNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~------~~~~-~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.||...|.+++.+.. ..++++..++|+.+++|... +. .... ..... ....+...+|+|++++.++..
T Consensus 149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dvA~~v~~l~s~ 227 (246)
T 2ag5_A 149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ-KTGRFATAEEIAMLCVYLASD 227 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC-TTSSCEEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHhCc
Confidence 999999999988643 34899999999999988421 11 0000 00000 112577899999999999865
Q ss_pred C---CC-ceeEccCCC
Q 005818 586 N---LS-GIWNFTNPG 597 (676)
Q Consensus 586 ~---~~-g~yn~~~~~ 597 (676)
+ .+ .++++.++.
T Consensus 228 ~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 228 ESAYVTGNPVIIDGGW 243 (246)
T ss_dssp GGTTCCSCEEEECTTG
T ss_pred cccCCCCCEEEECCCc
Confidence 3 23 478877763
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.7e-17 Score=158.46 Aligned_cols=195 Identities=12% Similarity=0.057 Sum_probs=143.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999755 45789999999999888765 689
Q ss_pred EEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH-----Hc-CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR-----EN-GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~-----~~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||.... |..+...++.+..+++|+.++.++++++. +. +.++|++||...+.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 148 (257)
T 3imf_A 86 ILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD----------------- 148 (257)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc-----------------
Confidence 99999996421 11122344556789999999999999883 22 35788888876542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC----eEEEEeeecccCCCCChHH--H--H-----HHHHhcCceeccCCCccchhh
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN----VCTLRVRMPISSDLNNPRN--F--I-----TKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~l~~~~~r~~~~~g~~~--~--~-----~~~~~~~~~~~~~~~~~~v~D 574 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+.. . . ..+.... ....+...+|
T Consensus 149 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p~~r~~~ped 223 (257)
T 3imf_A 149 -AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV----PLGRLGTPEE 223 (257)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS----TTCSCBCHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC----CCCCCcCHHH
Confidence 123346799999999999888642 3589999999999987631 0 1 1111110 1125778999
Q ss_pred HHHHHHHHHhcC----CCceeEccCCCccc
Q 005818 575 LLPISVEMAKRN----LSGIWNFTNPGVVS 600 (676)
Q Consensus 575 ~a~~~~~~~~~~----~~g~yn~~~~~~~s 600 (676)
+|++++.++... .+.++++.++...+
T Consensus 224 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 224 IAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 999999998754 23488888876543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-16 Score=155.73 Aligned_cols=197 Identities=15% Similarity=0.086 Sum_probs=141.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee-------------------------------------eccccCCChHHHH
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE-------------------------------------YGKGRLENRSQLL 425 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~-------------------------------------~~~~Dl~d~~~~~ 425 (676)
..++++||||+|+||++++++|+++|++|. ++.+|++|+++++
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 346899999999999999999999998653 3457999999999
Q ss_pred HHhhcc-----CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCC
Q 005818 426 ADIQNV-----KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDA 493 (676)
Q Consensus 426 ~~~~~~-----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~ 493 (676)
++++.+ ++|+|||+||...... .+...++.+..+++|+.|+.++++++.. . +.++|++||...+.
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 170 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--- 170 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS---
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc---
Confidence 888754 6899999999752111 1123344567789999999999998843 2 35788988876542
Q ss_pred CCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH---HHHHHHH-hcCc-----
Q 005818 494 KHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR---NFITKIS-RYNK----- 561 (676)
Q Consensus 494 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~---~~~~~~~-~~~~----- 561 (676)
+......|+.||...+.+.+.+.. ..++++..++|+.+++|. ....... ....
T Consensus 171 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 235 (280)
T 3pgx_A 171 ---------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSF 235 (280)
T ss_dssp ---------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGS
T ss_pred ---------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhh
Confidence 123346799999999999988643 368999999999999874 1111111 1111
Q ss_pred -ee-ccCCCccchhhHHHHHHHHHhcC---C-CceeEccCCC
Q 005818 562 -VV-NIPNSMTILDELLPISVEMAKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 562 -~~-~~~~~~~~v~D~a~~~~~~~~~~---~-~g~yn~~~~~ 597 (676)
.. .....+.+++|+|++++.++... . +.++++.++.
T Consensus 236 ~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 236 PPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp CCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 00 11114779999999999998654 2 3488887763
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-16 Score=154.89 Aligned_cols=194 Identities=15% Similarity=0.126 Sum_probs=142.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 92 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEI 92 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999754 45678999999999888755 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .....++.+..+++|+.|+.++++++. +.+ .++|++||...+.
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 155 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------------- 155 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG-----------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc-----------------
Confidence 99999999752111 122345566789999999988877763 334 4788888875542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+..+...|+.||...+.+++.+.. ..++++..++|+.+..+. .+...+....+ ...+...+|+|++
T Consensus 156 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~ 230 (256)
T 3ezl_A 156 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP----VRRLGSPDEIGSI 230 (256)
T ss_dssp -SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHST----TSSCBCHHHHHHH
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCC----CCCCcCHHHHHHH
Confidence 223457899999999998887642 357999999999998774 22233322221 1346789999999
Q ss_pred HHHHHhcC---C-CceeEccCCCcc
Q 005818 579 SVEMAKRN---L-SGIWNFTNPGVV 599 (676)
Q Consensus 579 ~~~~~~~~---~-~g~yn~~~~~~~ 599 (676)
++.++... . +.++++.+|..+
T Consensus 231 ~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 231 VAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHHHhCCcccCCcCcEEEECCCEeC
Confidence 99988643 2 348998887543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=153.92 Aligned_cols=177 Identities=15% Similarity=0.120 Sum_probs=132.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-------ce------------------------eeccccCCChHHHHHHhhcc--
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI-------PF------------------------EYGKGRLENRSQLLADIQNV-- 431 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~-------~v------------------------~~~~~Dl~d~~~~~~~~~~~-- 431 (676)
++|+||||+|+||++++++|+++|+ +| .++.+|++|+++++++++.+
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999998 54 35678999999998888753
Q ss_pred ---CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCC
Q 005818 432 ---KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 432 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
++|+|||+||...... .....++....+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------ 150 (244)
T 2bd0_A 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------------ 150 (244)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------
T ss_pred hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC------------
Confidence 5799999999652111 1123345667899999999999998843 33 4788888876552
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..+.+.|+.||...|.+++.+. ...++++..++|+.+++|.. ... .... ...+++++|+|+++
T Consensus 151 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~-~~~~----~~~~~~~~dva~~~ 217 (244)
T 2bd0_A 151 ------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW--GKV-DDEM----QALMMMPEDIAAPV 217 (244)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT--CCC-CSTT----GGGSBCHHHHHHHH
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh--hhc-cccc----cccCCCHHHHHHHH
Confidence 12344789999999999987653 34689999999999998731 000 0000 12578999999999
Q ss_pred HHHHhcC
Q 005818 580 VEMAKRN 586 (676)
Q Consensus 580 ~~~~~~~ 586 (676)
+.++..+
T Consensus 218 ~~l~~~~ 224 (244)
T 2bd0_A 218 VQAYLQP 224 (244)
T ss_dssp HHHHTSC
T ss_pred HHHHhCC
Confidence 9999865
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.7e-16 Score=156.02 Aligned_cols=187 Identities=12% Similarity=0.030 Sum_probs=134.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+++|+||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 34689999999999999999999999754 56789999999999888754 67
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|+|||+||...... .....++....+++|+.|+.++++++.. . +.++|++||...+.
T Consensus 110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 173 (301)
T 3tjr_A 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV---------------- 173 (301)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----------------
Confidence 99999999752111 1223455567899999999999998744 2 34788888876542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhc-------Cce-----eccCCCccc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRY-------NKV-----VNIPNSMTI 571 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~-------~~~-----~~~~~~~~~ 571 (676)
+..+...|+.||...+.+.+.+. ...++++..++|+.+..+..--...... .+. ......++.
T Consensus 174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (301)
T 3tjr_A 174 --PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS 251 (301)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCC
Confidence 22344679999999999988763 2347999999999998763110000000 000 111225789
Q ss_pred hhhHHHHHHHHHhcCC
Q 005818 572 LDELLPISVEMAKRNL 587 (676)
Q Consensus 572 v~D~a~~~~~~~~~~~ 587 (676)
++|+|++++.+++++.
T Consensus 252 pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 252 ADDVARLTADAILANR 267 (301)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999998764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=157.58 Aligned_cols=196 Identities=12% Similarity=0.057 Sum_probs=144.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 105 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 44689999999999999999999999754 56778999999999888755 6
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||.... +......++....+++|+.|+.++++++.. .+.++|++||...+..
T Consensus 106 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 170 (277)
T 4fc7_A 106 IDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG--------------- 170 (277)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT---------------
T ss_pred CCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC---------------
Confidence 8999999996421 111223455667899999999999998743 2458889988765521
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHH---------HHHHHhcCceeccCCCccchhh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---------ITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~v~D 574 (676)
......|+.||...+.+++.+.. ..++++..++|+.+.++... ........ ....+...+|
T Consensus 171 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----p~~r~~~p~d 243 (277)
T 4fc7_A 171 ---QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS----PLQRLGNKTE 243 (277)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS----TTSSCBCHHH
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC----CCCCCcCHHH
Confidence 12346799999999999988643 34799999999999976311 11111111 1124678999
Q ss_pred HHHHHHHHHhcC---C-CceeEccCCCccc
Q 005818 575 LLPISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 575 ~a~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
+|++++.++... . +.++++.+|..++
T Consensus 244 vA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 244 IAHSVLYLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred HHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence 999999998753 2 3488888876544
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.68 E-value=2.7e-16 Score=153.12 Aligned_cols=192 Identities=14% Similarity=0.059 Sum_probs=141.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++++||||+|+||++++++|+++|++| ..+.+|++|+++++++++.+ ++|++|
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 88 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILV 88 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 45778999999999888754 679999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .....++.+..+++|+.|+.++++++.. . +.++|++||...+. +..
T Consensus 89 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~ 150 (248)
T 3op4_A 89 NNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM------------------GNA 150 (248)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------------------CCT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC------------------CCC
Confidence 9999753111 1223455667899999999999998854 3 34788888875542 123
Q ss_pred CCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+...|+.||...+.+.+.+.. ..++++..++|+.+..+. .......... ....+..++|+|++++.+
T Consensus 151 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~----p~~r~~~p~dva~~v~~L 226 (248)
T 3op4_A 151 GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV----PAGRLGDPREIASAVAFL 226 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTC----TTCSCBCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHH
Confidence 447799999999988887642 357999999999988653 1112222111 123577899999999998
Q ss_pred HhcC---C-CceeEccCCC
Q 005818 583 AKRN---L-SGIWNFTNPG 597 (676)
Q Consensus 583 ~~~~---~-~g~yn~~~~~ 597 (676)
+... . +.++++.+|.
T Consensus 227 ~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 227 ASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred cCCccCCccCcEEEECCCe
Confidence 8654 2 3488887764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-16 Score=153.66 Aligned_cols=195 Identities=16% Similarity=0.113 Sum_probs=138.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 579999999999999999999999755 35678999999999888743 6799
Q ss_pred EEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 436 VFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 436 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|||+||.... +......++.+..+++|+.++.++++++... + .++|++||...+.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------ 144 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------------ 144 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC------------------
Confidence 9999996521 1111223445678999999999988877542 3 4788888875442
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHh-----cCc---ee---ccCCCccch
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISR-----YNK---VV---NIPNSMTIL 572 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~-----~~~---~~---~~~~~~~~v 572 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+.++. .+...... ... .+ .....+...
T Consensus 145 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 224 (256)
T 1geg_A 145 GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEP 224 (256)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCH
Confidence 112346799999999999888642 358999999999999874 11110000 000 00 011257889
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
+|+|++++.++..+ ..| ++++.++.
T Consensus 225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (256)
T 1geg_A 225 EDVAACVSYLASPDSDYMTGQSLLIDGGM 253 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 99999999998654 234 78877764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-15 Score=145.27 Aligned_cols=215 Identities=16% Similarity=0.158 Sum_probs=150.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
++|++|||||++.||+++++.|+++ |++|++.+|.... .......+++|++|+++++++++. .
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 7889998885321 112334789999999998777632 3
Q ss_pred CCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 81 KIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 81 ~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-+...
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~-------- 148 (261)
T 4h15_A 78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE-------- 148 (261)
T ss_dssp SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT--------
T ss_pred CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC--------
Confidence 79999999986432 23556778899999999998887664 233 468999999654322110
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC----------CC--ChHHHHHHHHHCCCCce
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF----------PE--KLIPKFILLAMKGKPLP 215 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~----------~~--~~~~~~~~~~~~~~~~~ 215 (676)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... .. .....+....... ++
T Consensus 149 -----~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P 221 (261)
T 4h15_A 149 -----STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG--IP 221 (261)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC--CT
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC--CC
Confidence 1345999999999999887776 4899999999999654210 00 0011111111122 11
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+ .-+...+|+|.++++++... -.|+.+.+.+|-
T Consensus 222 l-------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 222 L-------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp T-------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred C-------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 1 13667899999999988542 267889888764
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=157.84 Aligned_cols=184 Identities=15% Similarity=0.101 Sum_probs=129.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+||
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV 107 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLF 107 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999865 45788999999999988755 679999
Q ss_pred ECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc-------CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 438 NAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN-------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 438 h~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|+||.... +..+...++.+..+++|+.|+.++++++... +.++|++||...+.
T Consensus 108 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------------ 169 (272)
T 4dyv_A 108 NNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------------------ 169 (272)
T ss_dssp ECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS------------------
T ss_pred ECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC------------------
Confidence 99997521 1112234455678999999999988877543 34788888875441
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHHHHHHHHhcCc---eeccCCCccchhhHHHHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK---VVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.+..+. ...+..... .......+..++|+|++++.+
T Consensus 170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL 247 (272)
T 4dyv_A 170 PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM--AQKMKAGVPQADLSIKVEPVMDVAHVASAVVYM 247 (272)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh--hhhhcccchhhhhcccccCCCCHHHHHHHHHHH
Confidence 223457799999999999988642 358999999999988663 111111111 001112577899999999999
Q ss_pred HhcCC
Q 005818 583 AKRNL 587 (676)
Q Consensus 583 ~~~~~ 587 (676)
+..+.
T Consensus 248 ~s~~~ 252 (272)
T 4dyv_A 248 ASLPL 252 (272)
T ss_dssp HHSCT
T ss_pred hCCCC
Confidence 98763
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=156.63 Aligned_cols=194 Identities=15% Similarity=0.064 Sum_probs=140.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 111 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 45778999999999988855 679
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|||+||...... .+...++.+..+++|+.|+.++++++... +.++|++||...+...
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~--------------- 176 (276)
T 3r1i_A 112 IAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN--------------- 176 (276)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------------
Confidence 9999999762111 11223445567899999999999988553 2567888876544210
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-----HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+..+.+.|+.||...+.+.+.+.. ..++++..++|+.+..+. .+........ ....+...+|+|+++
T Consensus 177 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v 251 (276)
T 3r1i_A 177 -IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKI----PLGRMGRPEELTGLY 251 (276)
T ss_dssp -CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGS----TTSSCBCGGGSHHHH
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 112346799999999999988643 358999999999998763 1111111111 112467899999999
Q ss_pred HHHHhcC---CC-ceeEccCCC
Q 005818 580 VEMAKRN---LS-GIWNFTNPG 597 (676)
Q Consensus 580 ~~~~~~~---~~-g~yn~~~~~ 597 (676)
+.++... .+ .++++.++.
T Consensus 252 ~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 252 LYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHcCccccCccCcEEEECcCc
Confidence 9998753 23 488887764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-18 Score=172.63 Aligned_cols=173 Identities=15% Similarity=0.104 Sum_probs=125.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCC-----cEEEEEcCCCcccc----ccCCCCCCCCCCeEEEEecCCCHHHHHHHH
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPE-----YKIVVLDKLDYCSN----LKNLNPSRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~----~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
+|+|+||||+||||++++..|+++|+. .+|+++|+...... ...+. ...+.++ +|+.+.+.+.+++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~----~~~~~~~-~di~~~~~~~~a~ 78 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE----DCAFPLL-AGLEATDDPKVAF 78 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH----TTTCTTE-EEEEEESCHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh----ccccccc-CCeEeccChHHHh
Confidence 468999999999999999999998531 38999988531000 00111 1111223 6777766677777
Q ss_pred ccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEeccc-ccCCCCCCcCCCCCCCC-CC
Q 005818 78 LTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDE-VYGETDEDAVVGNHEAS-QL 154 (676)
Q Consensus 78 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~-~~ 154 (676)
.++|+|||+|+..... ..+..++++.|+.++.++++++++++ +-.+|+++|+.. +... . ..+.. ..
T Consensus 79 --~~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~-----~--~~~~~~~~ 147 (327)
T 1y7t_A 79 --KDADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL-----I--AYKNAPGL 147 (327)
T ss_dssp --TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-----H--HHHTCTTS
T ss_pred --CCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH-----H--HHHHcCCC
Confidence 7899999999987532 35677899999999999999999874 334778777632 1100 0 01111 24
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCC
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 195 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~ 195 (676)
.|.++|+.+|+..|++...+++.+|++.+++|+++|||+..
T Consensus 148 ~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 148 NPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred ChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 46678999999999999999988999999999999999876
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.4e-16 Score=152.96 Aligned_cols=199 Identities=14% Similarity=0.097 Sum_probs=143.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-CCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-KPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-~~d~V 436 (676)
.++++||||+|+||++++++|+++|++| ..+.+|++|++.++++++.. ++|++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 89 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDIL 89 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 3689999999999999999999999765 35678999999999988865 68999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||...... .+...++....+++|+.++.++++++.. .+ .++|++||...+. +.
T Consensus 90 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~ 151 (267)
T 3t4x_A 90 INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM------------------PS 151 (267)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS------------------CC
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc------------------CC
Confidence 99999753111 1122334456689999998888777644 33 4788888876542 22
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcC---------------ceeccCCCcc
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYN---------------KVVNIPNSMT 570 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~---------------~~~~~~~~~~ 570 (676)
.+...|+.||...+.+.+.+. ...++++..+.|+.+..+. .++....... ........+.
T Consensus 152 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 231 (267)
T 3t4x_A 152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI 231 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCB
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCcc
Confidence 345789999999999998863 3468999999999998873 2222111000 0001123678
Q ss_pred chhhHHHHHHHHHhcC---C-CceeEccCCCccc
Q 005818 571 ILDELLPISVEMAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~-~g~yn~~~~~~~s 600 (676)
..+|+|++++.++... . +.++++.+|...+
T Consensus 232 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 232 RPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp CTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred CHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 8999999999988743 2 3489998886655
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-16 Score=154.01 Aligned_cols=193 Identities=16% Similarity=0.054 Sum_probs=137.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhc------cCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQN------VKP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~------~~~ 433 (676)
.++++||||+|+||++++++|+++|++| ..+.+|++|+++++++++. -++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 100 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 100 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999765 3467899999998888753 267
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHH----HcC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCR----ENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||.... +..+...++.+..+++|+.++.++++++. +.+ .++|++||...+.
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 163 (273)
T 1ae1_A 101 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----------------- 163 (273)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-----------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-----------------
Confidence 999999996521 11112334556778999999999999884 333 4788888876552
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HH----------HHHHhcCceeccCCCccch
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI----------TKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~----------~~~~~~~~~~~~~~~~~~v 572 (676)
+..+...|+.||...+.+.+.+.. ..++++..++|+.++++.. .. ..+... . ....+...
T Consensus 164 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~-p~~r~~~p 238 (273)
T 1ae1_A 164 -ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK---T-PMGRAGKP 238 (273)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH---S-TTCSCBCH
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc---C-CCCCCcCH
Confidence 112346799999999999988643 3489999999999998731 11 111111 0 11247789
Q ss_pred hhHHHHHHHHHhcC---C-CceeEccCCCc
Q 005818 573 DELLPISVEMAKRN---L-SGIWNFTNPGV 598 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~-~g~yn~~~~~~ 598 (676)
+|+|++++.++... . +.++++.++..
T Consensus 239 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 239 QEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 99999999988643 2 34888887743
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-16 Score=155.23 Aligned_cols=190 Identities=17% Similarity=0.132 Sum_probs=137.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------eeccccCCChHHHHHHhhcc-------CCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------EYGKGRLENRSQLLADIQNV-------KPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------~~~~~Dl~d~~~~~~~~~~~-------~~d~Vih~a~~ 442 (676)
+++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+|||+||.
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~ 82 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG 82 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcc
Confidence 3689999999999999999999999876 34678999999888777632 67999999996
Q ss_pred cCCCC--cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 443 TGRPN--VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 443 ~~~~~--~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
..... .....++.+..+++|+.++.++++++... +.++|++||...+. +..+...|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~ 144 (236)
T 1ooe_A 83 WAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------PTPSMIGYG 144 (236)
T ss_dssp CCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc------------------CCCCcHHHH
Confidence 52111 12234556678999999999999998774 34788888876552 123346799
Q ss_pred hhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC----C-
Q 005818 518 KTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN----L- 587 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~- 587 (676)
.||...+.+++.+.. ..++++..++|+.+.++. ......... ...++..+|+|++++..+..+ .
T Consensus 145 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~--~~~~~~~~~----~~~~~~~~dvA~~i~~~l~s~~~~~~~ 218 (236)
T 1ooe_A 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM--NRKWMPNAD----HSSWTPLSFISEHLLKWTTETSSRPSS 218 (236)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH--HHHHSTTCC----GGGCBCHHHHHHHHHHHHHCGGGCCCT
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc--hhhcCCCcc----ccccCCHHHHHHHHHHHHcCCCccccc
Confidence 999999999988643 346999999999999873 222211111 123567899999998666332 2
Q ss_pred CceeEccCCC
Q 005818 588 SGIWNFTNPG 597 (676)
Q Consensus 588 ~g~yn~~~~~ 597 (676)
+..+++.++.
T Consensus 219 G~~~~v~gg~ 228 (236)
T 1ooe_A 219 GALLKITTEN 228 (236)
T ss_dssp TCEEEEEEET
T ss_pred ccEEEEecCC
Confidence 3366665543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.9e-16 Score=154.34 Aligned_cols=196 Identities=13% Similarity=0.069 Sum_probs=137.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ +
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 83 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999755 23557999999998888753 6
Q ss_pred CCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|+|||+||...... .+...++.+..+++|+.|+.++++++.. .+ .++|++||...+.
T Consensus 84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 147 (260)
T 1x1t_A 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV---------------- 147 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc----------------
Confidence 799999999652111 1123345567899999999999988853 34 5788888876542
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--HHHHHHh-----cCce---e----ccCCCc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR-----YNKV---V----NIPNSM 569 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~-----~~~~---~----~~~~~~ 569 (676)
+..+...|+.||...|.+.+.+.. ..++++..++|+.+..+.. ....... .... . .....+
T Consensus 148 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 225 (260)
T 1x1t_A 148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225 (260)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCC
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCC
Confidence 113346799999999999987632 3489999999999998731 1110000 0000 0 012357
Q ss_pred cchhhHHHHHHHHHhcC---CC-ceeEccCCC
Q 005818 570 TILDELLPISVEMAKRN---LS-GIWNFTNPG 597 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~---~~-g~yn~~~~~ 597 (676)
.+.+|+|++++.++... .. .++++.++.
T Consensus 226 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 89999999999998653 23 488887764
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=157.35 Aligned_cols=199 Identities=12% Similarity=0.061 Sum_probs=141.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++++||||+|+||++++++|+++|++| .++.+|++|.++++++++.+ ++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKV 104 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4579999999999999999999999754 45678999999999888754 68
Q ss_pred CEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|+|||+||...... .....++.+..+++|+.++.++++++.. .+ .++|++||...+.
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 167 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR----------------- 167 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------------
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc-----------------
Confidence 99999999752111 1123345567899999999999998754 33 5788888875542
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCc-eeccCCCccchhhHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK-VVNIPNSMTILDELLPISVE 581 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~-~~~~~~~~~~v~D~a~~~~~ 581 (676)
+..+...|+.||...+.+++.+.. ..++++..+.|+.+..+. .+......... .......+...+|+|++++.
T Consensus 168 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~ 246 (269)
T 3gk3_A 168 -GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAF 246 (269)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHH
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHH
Confidence 123346799999999998887642 347999999999998763 11111111000 00111256789999999999
Q ss_pred HHhcC---C-CceeEccCCCccc
Q 005818 582 MAKRN---L-SGIWNFTNPGVVS 600 (676)
Q Consensus 582 ~~~~~---~-~g~yn~~~~~~~s 600 (676)
++... . +.++++.+|..+|
T Consensus 247 L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 247 LCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp HTSTTCTTCCSCEEEESTTSCCC
T ss_pred HhCCCcCCeeCcEEEECCCEeCc
Confidence 98754 2 3489999886653
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-16 Score=156.14 Aligned_cols=192 Identities=9% Similarity=-0.003 Sum_probs=140.8
Q ss_pred ccEEEEEcCC--cchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRT--GWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~--G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+++|+||||+ |+||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999 999999999999999865 24568999999998888754 67
Q ss_pred CEEEECccccCC-----CCcchhccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 434 THVFNAAGVTGR-----PNVDWCETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 434 d~Vih~a~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
|+|||+||.... |......++.+..+++|+.|+.++++++... +.++|++||...+.
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-------------- 166 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK-------------- 166 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS--------------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc--------------
Confidence 999999996521 1112234455678999999999999998764 35788888865442
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+..+...|+.||...+.+++.+... .++++..++|+.++++. .+...+....+ ...+.+++
T Consensus 167 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~ 238 (285)
T 2p91_A 167 ----VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNP----FGKPITIE 238 (285)
T ss_dssp ----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHST----TSSCCCHH
T ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCC----CCCCcCHH
Confidence 1123467999999999999886433 47999999999999873 11122211111 12467899
Q ss_pred hHHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 574 ELLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
|+|++++.++... ..| +|++.++.
T Consensus 239 dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 239 DVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 9999999998643 234 78888764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=154.74 Aligned_cols=200 Identities=15% Similarity=0.050 Sum_probs=143.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-----CCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-----KPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih 438 (676)
.++++||||+|+||++++++|+++|++| .++.+|++|+++++++++.+ ++|+|||
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 88 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 88 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999865 35678999999999888754 6799999
Q ss_pred CccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 439 AAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 439 ~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
+||.... +..+...++.+..+++|+.++.++++++.. .+.++|++||...+.. ...
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~ 150 (270)
T 1yde_A 89 NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG------------------QAQ 150 (270)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC------------------CTT
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC------------------CCC
Confidence 9996521 111122344567889999999999998853 3568888888654421 122
Q ss_pred CCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH-HHH--------HHHhcCceeccCCCccchhhHHHHHH
Q 005818 513 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-FIT--------KISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-~~~--------~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
...|+.||...|.+.+.+.. ..++++..++|+.++++.. ... .+....... ....+...+|+|++++
T Consensus 151 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~p~dva~~v~ 229 (270)
T 1yde_A 151 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ-PLGRMGQPAEVGAAAV 229 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS-TTSSCBCHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcC-CCCCCcCHHHHHHHHH
Confidence 36799999999999988642 3589999999999998741 110 000000000 1124678999999999
Q ss_pred HHHhcC--CCc-eeEccCCCcccHH
Q 005818 581 EMAKRN--LSG-IWNFTNPGVVSHN 602 (676)
Q Consensus 581 ~~~~~~--~~g-~yn~~~~~~~s~~ 602 (676)
.++... ..| ++++.++......
T Consensus 230 ~L~s~~~~itG~~i~vdGG~~~~~~ 254 (270)
T 1yde_A 230 FLASEANFCTGIELLVTGGAELGYG 254 (270)
T ss_dssp HHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred HHcccCCCcCCCEEEECCCeecccC
Confidence 888642 234 8888888665543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-16 Score=153.59 Aligned_cols=195 Identities=13% Similarity=0.062 Sum_probs=143.8
Q ss_pred CccEEEEEcCCcc--hhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGW--IGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~--iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
..++++||||+|+ ||+++++.|+++|++| .++.+|++|.++++++++.+ +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999988 9999999999999765 46678999999999888755 6
Q ss_pred CCEEEECccccC-----CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTG-----RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~-----~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|++||+||... .+......++....+++|+.++.++++++... +.++|++||...+.
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-------------- 175 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK-------------- 175 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS--------------
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc--------------
Confidence 899999999752 11123334556678999999999999998764 34788888876542
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+......|+.||...+.+.+.+.. ..++++..++|+.+..+. .+........+ ...+...+
T Consensus 176 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p----~~r~~~pe 247 (293)
T 3grk_A 176 ----VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP----LRRTVTID 247 (293)
T ss_dssp ----BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHST----TSSCCCHH
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCC----CCCCCCHH
Confidence 123347799999999999988642 357999999999998763 11111211111 12466899
Q ss_pred hHHHHHHHHHhcC---CC-ceeEccCCCcc
Q 005818 574 ELLPISVEMAKRN---LS-GIWNFTNPGVV 599 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~-g~yn~~~~~~~ 599 (676)
|+|++++.++... .+ .++++.++..+
T Consensus 248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 248 EVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHcCccccCCcceEEEECCCccc
Confidence 9999999998753 23 48888887543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-16 Score=159.20 Aligned_cols=219 Identities=15% Similarity=0.067 Sum_probs=147.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCH-HHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASA-DLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~-~~~~~~~~~-- 79 (676)
+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+. .....++.++.+|++|+ +.+..+++.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLK-NSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-TTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 34689999999999999999999999 678999988653211 11111 11234799999999998 777666532
Q ss_pred ---CCCCEEEEccccCCc----------------------------------CCcCCChHHHHHHHHHHHHHHHHHHHHc
Q 005818 80 ---EKIDTIMHFAAQTHV----------------------------------DNSFGNSFEFTKNNIYGTHVLLEACKIT 122 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----------------------------------~~~~~~~~~~~~~nv~~~~~ll~a~~~~ 122 (676)
.++|+|||+||.... ..+.+++...+++|+.|+.++++++...
T Consensus 87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 389999999998642 1233445677999999999998877531
Q ss_pred ---CCCceEEEEecccccCCCCCCc----------------------------CC-CCCCCCCCCCCChhHHHHHHHHHH
Q 005818 123 ---GQIKRFIHVSTDEVYGETDEDA----------------------------VV-GNHEASQLLPTNPYSATKAGAEML 170 (676)
Q Consensus 123 ---~~~~~~v~~SS~~vyg~~~~~~----------------------------~~-~~~e~~~~~p~~~Y~~sK~~~E~~ 170 (676)
.+..+||++||...+....... .. .........+...|+.+|...+.+
T Consensus 167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 1257999999976543221000 00 000111122345799999999999
Q ss_pred HHHHHHHc-CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC--CCc
Q 005818 171 VMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE--VGH 247 (676)
Q Consensus 171 ~~~~~~~~-~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~--~~~ 247 (676)
++.+++++ ++++.++.||.|..+..... .....++.++.++.++..+. .++
T Consensus 247 ~~~la~e~~~i~v~~v~PG~v~T~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~g 300 (311)
T 3o26_A 247 TRVLANKIPKFQVNCVCPGLVKTEMNYGI--------------------------GNYTAEEGAEHVVRIALFPDDGPSG 300 (311)
T ss_dssp HHHHHHHCTTSEEEEECCCSBCSGGGTTC--------------------------CSBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred HHHHHhhcCCceEEEecCCceecCCcCCC--------------------------CCCCHHHHHHHHHHHHhCCCCCCCc
Confidence 99998886 69999999999976532110 12456888998888876543 334
Q ss_pred eEEEc
Q 005818 248 VYNIG 252 (676)
Q Consensus 248 ~y~i~ 252 (676)
.|..+
T Consensus 301 ~~~~~ 305 (311)
T 3o26_A 301 FFYDC 305 (311)
T ss_dssp CEETC
T ss_pred eEecc
Confidence 44443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=156.07 Aligned_cols=194 Identities=15% Similarity=0.146 Sum_probs=139.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ +
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999765 24568999999999888764 6
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHH----HHHc----CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADV----CREN----GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a----~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|+|||+||.. . .++....+++|+.++..+.++ +++. +.++|++||...+.
T Consensus 87 id~lv~~Ag~~---~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 145 (267)
T 2gdz_A 87 LDILVNNAGVN---N----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-------------- 145 (267)
T ss_dssp CCEEEECCCCC---C----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred CCEEEECCCCC---C----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--------------
Confidence 79999999965 2 345667889999977665544 4443 24688888876552
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChHHHHHHHHh----cC-----cee--ccC-C
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISR----YN-----KVV--NIP-N 567 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~----~~-----~~~--~~~-~ 567 (676)
+..+...|+.||...|.+.+.+. ...++++..++|+.+..+.. ..+.. .. ... ... .
T Consensus 146 ----~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (267)
T 2gdz_A 146 ----PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL--ESIEKEENMGQYIEYKDHIKDMIKYY 219 (267)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH--HGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh--hccccccccchhhhHHHHHHHHhccc
Confidence 11234679999999999887631 23689999999999988731 11000 00 000 000 1
Q ss_pred CccchhhHHHHHHHHHhcC--CCceeEccCCCcccHHHH
Q 005818 568 SMTILDELLPISVEMAKRN--LSGIWNFTNPGVVSHNEI 604 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~--~~g~yn~~~~~~~s~~e~ 604 (676)
.+++++|+|++++.++..+ .+.+|++.+++.+++.|+
T Consensus 220 ~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 220 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred cCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 4679999999999998765 345999999888776553
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=155.66 Aligned_cols=189 Identities=13% Similarity=-0.005 Sum_probs=138.3
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcC---Cce-----------------------eeccccCCChHHHHHHhhcc----
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKG---IPF-----------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g---~~v-----------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
..+++|+||||+|+||++++++|+++| ++| .++.+|++|.++++++++.+
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 345689999999999999999999999 654 45678999999998888744
Q ss_pred ---CCCEEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc----------------CCcEEEeecCeeee
Q 005818 432 ---KPTHVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCREN----------------GLLMMNYATGCIFE 490 (676)
Q Consensus 432 ---~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----------------~~~~v~~sS~~v~~ 490 (676)
++|+|||+||... .+......++....+++|+.++.++++++... +.++|++||...+.
T Consensus 99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 178 (267)
T 1sny_A 99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 178 (267)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence 5799999999652 01122234555678999999999999988654 35788998876653
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCe---EEEEeeecccCCCCChHHHHHHHHhcCceeccCC
Q 005818 491 YDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPN 567 (676)
Q Consensus 491 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~ 567 (676)
... +..+...|+.||...|.+++.+... .++++..++|+.+..+.. .. .
T Consensus 179 ~~~---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------~~------~ 230 (267)
T 1sny_A 179 QGN---------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG-------GS------S 230 (267)
T ss_dssp TTC---------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT-------CT------T
T ss_pred cCC---------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC-------CC------C
Confidence 210 1124467999999999999886432 579999999999876521 00 2
Q ss_pred CccchhhHHHHHHHHHhcC---CCceeEccCCCc
Q 005818 568 SMTILDELLPISVEMAKRN---LSGIWNFTNPGV 598 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~---~~g~yn~~~~~~ 598 (676)
.+...+|+|+.++.++... ..|.|...++..
T Consensus 231 ~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 231 APLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp CSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred CCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 3567899999999998754 346554444443
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.3e-17 Score=165.40 Aligned_cols=211 Identities=12% Similarity=0.089 Sum_probs=151.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCcee----------------------------------eccccCCChHHHHHHh
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFE----------------------------------YGKGRLENRSQLLADI 428 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~----------------------------------~~~~Dl~d~~~~~~~~ 428 (676)
..++++||||+|+||+++++.|+++|++|. ++.+|++|.+++++++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 346899999999999999999999997663 3568999999998888
Q ss_pred hcc-----CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----------CCcEEEeecCeeeec
Q 005818 429 QNV-----KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----------GLLMMNYATGCIFEY 491 (676)
Q Consensus 429 ~~~-----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----------~~~~v~~sS~~v~~~ 491 (676)
+.+ ++|+|||+||...... .+...++....+++|+.|+.++++++... +.++|++||...+..
T Consensus 106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 185 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG 185 (322)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence 754 6799999999752111 12234455678999999999999988543 147888888765521
Q ss_pred CCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH--HHHHHHHhcCceeccC
Q 005818 492 DAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIP 566 (676)
Q Consensus 492 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~ 566 (676)
..+...|+.||...+.+++.+.. ..++++..+.|+ +..+. ........ .....
T Consensus 186 ------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~---~~~~~ 243 (322)
T 3qlj_A 186 ------------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA---TQDQD 243 (322)
T ss_dssp ------------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-----------
T ss_pred ------------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh---ccccc
Confidence 12346799999999999988643 357999999998 54331 00000000 00011
Q ss_pred CCccchhhHHHHHHHHHhcC----CCceeEccCCCcc-----------------cHHHHHHHHHhhcCCC
Q 005818 567 NSMTILDELLPISVEMAKRN----LSGIWNFTNPGVV-----------------SHNEILEMYKAYIDPG 615 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~----~~g~yn~~~~~~~-----------------s~~e~~~~i~~~~g~~ 615 (676)
..+...+|+|++++.++... .+.++++.++... ++.|+++.+.+.+|.+
T Consensus 244 ~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred cCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 14568999999999988653 2348888887654 7799999999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 676 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-99 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-14 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-84 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-08 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-82 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-12 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-70 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-07 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 7e-68 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-13 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-63 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-58 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-04 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-58 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 5e-58 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 6e-07 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 2e-57 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-10 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 5e-54 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.003 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 1e-50 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-50 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 8e-49 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 3e-06 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 1e-45 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-43 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 3e-31 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 3e-25 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-24 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 2e-22 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 1e-18 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 6e-18 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 9e-07 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 8e-17 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 6e-14 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 0.001 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-13 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-09 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 7e-09 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 6e-07 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 2e-06 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 6e-05 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-04 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 0.001 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.003 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 306 bits (784), Expect = 5e-99
Identities = 136/344 (39%), Positives = 194/344 (56%), Gaps = 23/344 (6%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITG AGFI S V +I N + +V +DKL Y NL++L+ S + F D+
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG----- 123
+ + I + D +MH AA++HVD S F + NI GT+ LLE +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 124 ---QIKRFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMA 173
RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 174 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233
+ R+YGLP I T +N YGP FPEKLIP IL A++GKPLPI+G G +R +LY ED A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 234 EAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKL------FSLNPDTQIKFVENRPFN 287
A ++ +G+ G YNIG E++ +DV IC L + + QI +V +RP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWGDV 330
D+RY +D K+ + LGW T+E G++KT++WY++N W +V
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNV 344
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 71.7 bits (175), Expect = 5e-14
Identities = 42/279 (15%), Positives = 82/279 (29%), Gaps = 36/279 (12%)
Query: 400 LSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETI 459
LS I E FE+ + + +++ + +P V + A + VD T I
Sbjct: 43 LSDISESNRYNFEHAD--ICDSAEITRIFEQYQPDAVMHLAAESH---VDRSITGPAAFI 97
Query: 460 RTNVVGTLTLADVCRENGLLMMNYATGCI-------------FEYDAKHPEGTGIGFKEE 506
TN+VGT L +V R+ + + + + E
Sbjct: 98 ETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157
Query: 507 DKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISR--- 558
S YS +KA + L++ + + P I +
Sbjct: 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPY-HFPEKLIPLVILNAL 216
Query: 559 YNKVVNIPNSMT-------ILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAY 611
K + I + D + + + + +N + +++
Sbjct: 217 EGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDL 276
Query: 612 IDPGFKWTNFTLEEQAKVIVAPRSNNEL--DASKLKKEF 648
+D E+ V P + DA K+ +E
Sbjct: 277 LDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISREL 315
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 266 bits (680), Expect = 3e-84
Identities = 119/324 (36%), Positives = 181/324 (55%), Gaps = 12/324 (3%)
Query: 9 NILITGAAGFIASHVCNRLIGN----YPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIK 64
+L+TG AGFI SH +L+ P +++VLD L Y N NL P P +F+
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 65 GDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
GD+ D +D I+HFAA++HVD S + FT+ N+ GT LL+ G
Sbjct: 62 GDIR--DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
R +HVST++VYG D + E+S L P +PY+A+KAG++++ AY R+YGL V
Sbjct: 120 -GRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244
TR N YGP Q PEKLIP F+ + G LP++GDG+NVR +++ +D +L G
Sbjct: 176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235
Query: 245 VGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGW 303
G +Y+IG E ++ + + ++ V +R +D RY LD K+++ LG+
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGY 294
Query: 304 YERVTWEEGLQKTMKWYISNPDWW 327
+V++ +GL +T++WY N WW
Sbjct: 295 RPQVSFADGLARTVRWYRENRGWW 318
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 53.3 bits (127), Expect = 4e-08
Identities = 44/323 (13%), Positives = 98/323 (30%), Gaps = 62/323 (19%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYG-----------KGRLENRSQLLAD------- 427
+ L+ G G+IG + P G N + + AD
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 428 ----------IQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG 477
+ + + A + +VD TNV GT TL + G
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAG 118
Query: 478 LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----N 532
+ + + + + + + E S Y+ +KA + + + Y +
Sbjct: 119 VGRVVHVS-----TNQVYGSIDSGSWTESSPLEPN-SPYAASKAGSDLVARAYHRTYGLD 172
Query: 533 VCTLRVRMPISSDLNNPR---NFITKISRYNKVVNIPNS-------MTILDELLPISVEM 582
V R + + F+T + + + + D I++ +
Sbjct: 173 VRITRCCNNYGPYQHPEKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDHCRGIALVL 231
Query: 583 AKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDAS 642
A I++ +++ E+ + + + + + + LD
Sbjct: 232 AGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDL-----RYSLDGG 286
Query: 643 KLKKEF---PELLSIKESLIKNV 662
K+++E P+ +S + L + V
Sbjct: 287 KIERELGYRPQ-VSFADGLARTV 308
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 261 bits (668), Expect = 1e-82
Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 20/324 (6%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ I DV
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDG--HEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 58
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ ++D I H A+ N N + K N GT +L K G R
Sbjct: 59 VEPLYI-------EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--AR 109
Query: 128 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 110 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 169
Query: 186 RGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
R N +GP +++ FIL A++G+PL ++G GS R++ Y D+ +++
Sbjct: 170 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS- 228
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LG 302
V N+G +E +++ A I L + ++I+F+ + Q+ D++K K LG
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 286
Query: 303 WYERVTWEEGLQKTMKWYISNPDW 326
W V EEGL K + ++ ++
Sbjct: 287 WEPVVPLEEGLNKAIHYFRKELEY 310
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.6 bits (162), Expect = 2e-12
Identities = 46/299 (15%), Positives = 101/299 (33%), Gaps = 52/299 (17%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG----------------IPFEYGKGRLENRSQLLADIQ 429
+ LI G G++G L+ G + G E + + +
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62
Query: 430 NVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIF 489
++ +++ A + +T++TN +GTL + + + G ++ +T ++
Sbjct: 63 YIEVDQIYHLASPAS---PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVY 119
Query: 490 EYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISS 544
HP+ + P + Y + K + E + Y V R+
Sbjct: 120 GDPEVHPQSE--DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 177
Query: 545 --DLNNPR---NFITKISRYNKVVNIPNSMTIL------DELLPISVEMAKRNLSGIWNF 593
+N+ R NFI + + + + + S + +L+ V + N+S N
Sbjct: 178 RMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNL 236
Query: 594 TNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNN----ELDASKLKKEF 648
NP + E ++ K + G + ++ ++ + D K K
Sbjct: 237 GNPEEHTILEFAQLIKNLVGSGSEI----------QFLSEAQDDPQKRKPDIKKAKLML 285
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 231 bits (589), Expect = 1e-70
Identities = 122/331 (36%), Positives = 180/331 (54%), Gaps = 17/331 (5%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + L + + GD+
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDI 61
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A A+LV + K D I+H+AA++H DNS + F N GT+ LLEA + R
Sbjct: 62 ADAELVDKL--AAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK--YDIR 117
Query: 128 FIHVSTDEVYGET--DEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAYGRSY 178
F HVSTDEVYG+ ED + P++PYS+TKA ++++V A+ RS+
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
G+ + +N YGP Q EK IP+ I + G ++G+G NVR +++ D +
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKL 298
IL KG +G Y IG E+ +V I + P V +R +D RY +D KL
Sbjct: 238 ILTKGRMGETYLIGADGEKNNKEVLELILEKMG-QPKDAYDHVTDRAGHDLRYAIDASKL 296
Query: 299 KQ-LGWYERVT-WEEGLQKTMKWYISNPDWW 327
+ LGW + T + EGL++T++WY N DWW
Sbjct: 297 RDELGWTPQFTDFSEGLEETIQWYTDNQDWW 327
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.8 bits (120), Expect = 3e-07
Identities = 55/320 (17%), Positives = 98/320 (30%), Gaps = 49/320 (15%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKGIPFE-------YGKGRLENRSQLL--------ADIQN 430
++ G G+IG G N +L DI +
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63
Query: 431 VK-----PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMN--- 482
+ + D I TN +GT TL + R+ + +
Sbjct: 64 AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123
Query: 483 ---YATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 539
Y + E H EG G F E N + S YS TKA + ++K + ++
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-SPYSSTKAASDLIVKAWVRSFGVKAT 182
Query: 540 MPISSDLNNPRNFIT--------------KISRYNKVVNIPNSMTILDELLPISVEMAKR 585
+ S+ P I K Y + N+ + + D + + K
Sbjct: 183 ISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 242
Query: 586 NLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLK 645
+ + G ++ E+LE+ + + + + +DASKL+
Sbjct: 243 RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDL-----RYAIDASKLR 297
Query: 646 KEF---PELLSIKESLIKNV 662
E P+ E L + +
Sbjct: 298 DELGWTPQFTDFSEGLEETI 317
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 224 bits (571), Expect = 7e-68
Identities = 70/355 (19%), Positives = 126/355 (35%), Gaps = 47/355 (13%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-----NPSRLSPNFKF 62
K LITG G S++ L+ Y++ + + N + + +P +P F
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKG--YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 59
Query: 63 IKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
GD++ + IL + D + + A +HV SF + + GT LLEA +
Sbjct: 60 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119
Query: 123 G--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
G + RF ST E+YG E E + P +PY+ K A + + Y SYG+
Sbjct: 120 GLEKKTRFYQASTSELYGLVQEIPQ---KETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176
Query: 181 PVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYLYCEDVAEAF 236
N P + F + I + I +G ++ G+ ++R + + +D +
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236
Query: 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPD--------------------- 275
+L + + + I T + V +
Sbjct: 237 WMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAP 295
Query: 276 --------TQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYI 321
+ RP + D K + LGW +T E + + + +
Sbjct: 296 GVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL 350
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 69.1 bits (168), Expect = 4e-13
Identities = 38/252 (15%), Positives = 75/252 (29%), Gaps = 31/252 (12%)
Query: 400 LSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETI 459
+ + F G L + S L ++ V+P V+N ++ V T
Sbjct: 46 IYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSH---VAVSFESPEYTA 102
Query: 460 RTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515
+ +GTL L + R GL +T ++ + P KE S
Sbjct: 103 DVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP------QKETTPFYPR-SP 155
Query: 516 YSKTKAMVEELLKEYD-----NVCTLRV------RMPISSDLNNPRNFITKISRYNKVVN 564
Y+ K + Y C + R + I I++ +
Sbjct: 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL 215
Query: 565 IPN------SMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKW 618
+ + + M ++ + S + +EM A + ++
Sbjct: 216 YLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF 275
Query: 619 TNFTLEEQAKVI 630
+EE+ V+
Sbjct: 276 EGTGVEEKGIVV 287
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 212 bits (540), Expect = 1e-63
Identities = 89/344 (25%), Positives = 143/344 (41%), Gaps = 30/344 (8%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-SPNFKFIKGDV 67
+L+TG +G+I SH C +L+ N + +++LD L RL + F++GD+
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNG--HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ L+ IL IDT++HFA V S E+ NN+ GT L+ A + +K
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKN 118
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTR 186
FI S+ VYG+ + V + P +PY +K E ++ ++ + R
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176
Query: 187 GNNVYGPN----------QFPEKLIPKFILLAM-KGKPLPIHG------DGSNVRSYLYC 229
N G + P L+P +A+ + L I G DG+ VR Y++
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236
Query: 230 EDVAEAFDTILHKGEV---GHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF 286
D+A+ + K H+YN+G V+DV K F R
Sbjct: 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKA--CGKPVNYHFAPRREG 294
Query: 287 NDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWGD 329
+ Y+ D K + L W T +E Q T W +P + D
Sbjct: 295 DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 46.5 bits (109), Expect = 7e-06
Identities = 53/317 (16%), Positives = 98/317 (30%), Gaps = 62/317 (19%)
Query: 386 KFLIYGRTGWIG-------------------------GLLSKICEKKGIPFEYGKGRLEN 420
+ L+ G +G+IG +L I G + +G + N
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 421 RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480
+ + + + V + AG+ V E NV GTL L R +
Sbjct: 62 EALMTEILHDHAIDTVIHFAGLKA---VGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118
Query: 481 MNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY------DNVC 534
+++ D + E S Y K+K MVE++L + ++
Sbjct: 119 FIFSSSATVYGDQPKIP-----YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 535 TLRVRMPISSDLNN-----PRNFITKISRY--NKVVNIPNSMTILDELLPISVEMAKRNL 587
LR P+ + + P+ + Y V +S+ I P R+
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233
Query: 588 SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVI-----------VAPRSN 636
+ + + VV+ ++ +I ++ + APR
Sbjct: 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRRE 293
Query: 637 NE-----LDASKLKKEF 648
+ DASK +E
Sbjct: 294 GDLPAYWADASKADREL 310
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 199 bits (505), Expect = 1e-58
Identities = 85/332 (25%), Positives = 137/332 (41%), Gaps = 23/332 (6%)
Query: 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-----NLKNLNPSRLSPNFK 61
PK LITG AGFI S++ L+ + K+V LD +++L + NFK
Sbjct: 16 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
FI+GD+ + D + +D ++H AA V S + NI G +L A +
Sbjct: 74 FIQGDIRNLDDCNNA--CAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
F + ++ YG+ V E + P +PY+ TK E+ + R YG
Sbjct: 132 AKVQ-SFTYAASSSTYGDHPGLPKV---EDTIGKPLSPYAVTKYVNELYADVFSRCYGFS 187
Query: 182 VITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFD 237
I R NV+G Q P +IPK+ ++G + I+GDG R + Y E+ +A
Sbjct: 188 TIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL 247
Query: 238 TILHKGEVGH--VYNIGTKKERRVIDVATDICKLFSLNP---DTQIKFVENRPFNDQRYF 292
G VYNI + + + + N + + + R + +
Sbjct: 248 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSL 307
Query: 293 LDVQKLKQ-LGWYERVTWEEGLQKTMKWYISN 323
D+ K + LG+ + G+ M WYI
Sbjct: 308 ADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 339
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 43/287 (14%), Positives = 76/287 (26%), Gaps = 44/287 (15%)
Query: 388 LIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPN 447
G + + S + EK+ F++ +G + N V A G +
Sbjct: 49 FATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALG-----S 103
Query: 448 VDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA-TGCIFEYDAKHPEGTGIGFKEE 506
V + TN+ G L + R+ + YA + + P K E
Sbjct: 104 VPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KVE 156
Query: 507 DKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR---VRMPISSDLNNPRNFITKISR 558
D S Y+ TK + E + + LR V I K +
Sbjct: 157 DTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTS 216
Query: 559 ---YNKVVNIPNSMTILDELLPIS---------VEMAKRNLSGIWNFTNPGVVSHNEILE 606
V I + I + ++N G S N++
Sbjct: 217 SMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFF 276
Query: 607 MYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNE-----LDASKLKKEF 648
+ + + + + + D SK K
Sbjct: 277 ALRDGLAE------NGVSYHREPVYRDFREGDVRHSLADISKAAKLL 317
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 199 bits (505), Expect = 2e-58
Identities = 86/349 (24%), Positives = 128/349 (36%), Gaps = 34/349 (9%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS-PNFKFIKGD 66
K +L+TG AG+I SH LI N Y VV D L + L+ + F + D
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVD 59
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + + KID+++HFA V S + NNI GT VLLE + +
Sbjct: 60 LCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVS 118
Query: 127 RFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--YGLPVI 183
+F+ S+ VYG+ T ++ E L PTNPY TK E ++ S
Sbjct: 119 KFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFA 178
Query: 184 TTRGNNVY----------GPNQFPEKLIPKFILLAM-KGKPLPIHGDGSNVRSYLYCEDV 232
R N P P L+P +A+ + + L I GD + R D
Sbjct: 179 ILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238
Query: 233 AEAFDTILH-------------KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIK 279
D + +N+G+ K V +V CK D K
Sbjct: 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKA--SGIDLPYK 296
Query: 280 FVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWW 327
R + + K+ L W + E+ + KW NP +
Sbjct: 297 VTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGY 345
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (501), Expect = 5e-58
Identities = 71/346 (20%), Positives = 125/346 (36%), Gaps = 37/346 (10%)
Query: 8 KNI-LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN------PSRLSPNF 60
+N+ LITG G S++ L+ Y++ + + N + + + N
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 58
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
K GD+ + + I+ K I + AQ+HV SF + + GT LL+A K
Sbjct: 59 KLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 121 ITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 178
G +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAM----KGKPLPIHGDGSNVRSYLYCEDVAE 234
L + N P + + K G+ R + + +D E
Sbjct: 176 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235
Query: 235 AFDTILHKGEVG-------HVYNIGTKKERRVIDVATDICKLF-----------SLNPDT 276
A +L E V+++ E+ + + I +
Sbjct: 236 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 295
Query: 277 QIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYI 321
+ RP D K KQ L W RV ++E +++ + +
Sbjct: 296 TVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV 341
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.6 bits (117), Expect = 6e-07
Identities = 48/295 (16%), Positives = 84/295 (28%), Gaps = 31/295 (10%)
Query: 390 YGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVD 449
TG I L + G L + + L+ I VKPT ++N + V
Sbjct: 37 SFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSH---VK 93
Query: 450 WCETHKPETIRTNVVGTLTLADVCRENGLLMMNY----ATGCIFEYDAKHPEGTGIGFKE 505
T + VGTL L D + GL+ +T ++ + P KE
Sbjct: 94 ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP------QKE 147
Query: 506 EDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NFITKISRYNKV 562
S Y K ++ + L I + +PR NF+T+ +
Sbjct: 148 TTPFYPR-SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVA 206
Query: 563 VNIPN--------------SMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMY 608
+ + M + + + V S E +E
Sbjct: 207 KIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKS 266
Query: 609 KAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKESLIKNVF 663
+I W E + + + +D + + L + K
Sbjct: 267 FLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKL 321
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 195 bits (495), Expect = 2e-57
Identities = 65/337 (19%), Positives = 129/337 (38%), Gaps = 46/337 (13%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+ + I G G + S + +L +VL D + ++
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQRG--DVELVLRTRD--------------------ELNL 40
Query: 68 ASADLVHFILLTEKIDTIMHFAAQT-HVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ VH +E+ID + AA+ + + +F N+ ++ A +
Sbjct: 41 LDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VN 99
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ + + + +Y + + + + L PY+ K L +Y R YG +
Sbjct: 100 KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS 159
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAM---------KGKPLPIHGDGSNVRSYLYCEDVAEA 235
N+YGP+ I + K + + G G+ +R +L+ +D+A A
Sbjct: 160 VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 219
Query: 236 FDTILH---------KGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF 286
++ + N+GT + + ++A I K+ + ++ F ++P
Sbjct: 220 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKV--VGYKGRVVFDASKPD 277
Query: 287 NDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISN 323
R LDV +L QLGWY ++ E GL T +W++ N
Sbjct: 278 GTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 314
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 61.0 bits (147), Expect = 1e-10
Identities = 32/273 (11%), Positives = 83/273 (30%), Gaps = 15/273 (5%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG----IPFEYGKGRLENRSQLLADIQNVKPTHVFNAAG 441
+ I G G +G + + E++G + + L + + + + V+ AA
Sbjct: 4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAA 63
Query: 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA-TGCIFEYDAKHPEGTG 500
G + T+ + I N++ + +N + + + + CI+ AK P
Sbjct: 64 KVG--GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP--MA 119
Query: 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITK 555
+ T Y+ K +L + Y+ + ++ +N +
Sbjct: 120 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH-DNFHPSNSH 178
Query: 556 ISRYNKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPG 615
+ + +++ R + + + E++ P
Sbjct: 179 VIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPM 238
Query: 616 FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEF 648
N + ++ ++ K + F
Sbjct: 239 LSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 271
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 185 bits (471), Expect = 5e-54
Identities = 62/323 (19%), Positives = 119/323 (36%), Gaps = 13/323 (4%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
++ L+TG G +++ L+ Y++ L L + + ++ GD+
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM 58
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
A A V ++ + + + AAQ+ V S+ + G LLEA + R
Sbjct: 59 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 118
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
F ST E++G E + P +PY K + + Y S+GL +
Sbjct: 119 FYQASTSEMFGLIQA---ERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175
Query: 188 NNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243
N P + E K+ + + + G+ R + + D EA +L +
Sbjct: 176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235
Query: 244 EVGHVYNIGTKKERRVIDVATDICKLFSLN--PDTQIKFVENRPFNDQRYFLDVQKLKQ- 300
+ Y + T V D+ + L+ +I RP + K ++
Sbjct: 236 KADD-YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRV 294
Query: 301 LGWYERVTWEEGLQKTMKWYISN 323
LGW R + +E ++ ++ +
Sbjct: 295 LGWKPRTSLDELIRMMVEADLRR 317
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.1 bits (87), Expect = 0.003
Identities = 32/301 (10%), Positives = 83/301 (27%), Gaps = 45/301 (14%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG-----------------IPFEYGKGRLENRSQLLADI 428
L+ G TG G L+K+ +KG + +G ++ +AD
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61
Query: 429 QNVK----PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYA 484
+V+ + + V T + +G L + R+ Y
Sbjct: 62 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121
Query: 485 TGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM---- 540
++ ++E+ P + S Y K + Y L
Sbjct: 122 AST-----SEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176
Query: 541 ----PISSDLNNPRNFITKISRY----NKVVNIPN-----SMTILDELLPISVEMAKRNL 587
P+ R ++R + + + N + + M +++
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 236
Query: 588 SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKE 647
+ + + ++ ++ ++ ++ + + +K ++
Sbjct: 237 ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLL--GNPAKAQRV 294
Query: 648 F 648
Sbjct: 295 L 295
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 177 bits (448), Expect = 1e-50
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 30/337 (8%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
+LITG GF+ S++ + + ++V D L NL+ NF+F+ GD+ +
Sbjct: 3 LLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ V ++ D+ H A Q + S N + N+ GT LLEA + I
Sbjct: 61 KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120
Query: 130 HVSTDEVYG-------------ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 176
+ ST++VYG T D G E++QL +PY +K A+ ++ Y R
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180
Query: 177 SYGLPVITTRGNNVYGPNQ--------FPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228
+GL + R +++YG Q + KP I G+G VR L+
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240
Query: 229 CEDVAEAFDTILHKGEVG----HVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENR 284
ED+ + T L ++++ + N D + + R
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDY--CNIDMRFTNLPVR 298
Query: 285 PFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320
+ + + D++K+ + W +V+ ++G+QK W
Sbjct: 299 ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWT 335
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (448), Expect = 2e-50
Identities = 67/350 (19%), Positives = 125/350 (35%), Gaps = 36/350 (10%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRL-------SPNF 60
+ +L+TG AG+I SH L+ Y VV+D P L +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 61 KFIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 120
+F + D+ + + ++HFA V S ++ + N+ GT + +
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTI---QLLE 117
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-G 179
I V + + + + TNPY +K E ++ ++
Sbjct: 118 IMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKT 177
Query: 180 LPVITTRGNNVYGPN----------QFPEKLIPKFILLAM-KGKPLPIHG------DGSN 222
+ R N G + P L+P +A+ + + L + G DG+
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 223 VRSYLYCEDVAE---AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIK 279
VR Y++ D+A+ A L + +YN+GT V+ + + K K
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKA--SGKKIPYK 295
Query: 280 FVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDWWG 328
V R + + + ++ LGW + + + +W NP +G
Sbjct: 296 VVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 173 bits (438), Expect = 8e-49
Identities = 73/331 (22%), Positives = 124/331 (37%), Gaps = 26/331 (7%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
I ITGA GFIASH+ RL + ++ D KN + + +F D+
Sbjct: 16 LKISITGAGGFIASHIARRLKHE--GHYVIASD------WKKNEHMTEDMFCDEFHLVDL 67
Query: 68 ASADLVHFILLTEKIDTIM-HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ + TE +D + A + N NN + ++EA +I G IK
Sbjct: 68 RVMENCLKV--TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK 124
Query: 127 RFIHVSTDEVYGETDEDAV----VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 182
RF + S+ +Y E + + +A P + + K E L Y + +G+
Sbjct: 125 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 184
Query: 183 ITTRGNNVYGPNQFPEKLIPKFILLAMK-----GKPLPIHGDGSNVRSYLYCEDVAEAFD 237
R +N+YGP + K + + GDG RS+ + ++ E
Sbjct: 185 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV- 243
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297
L K + NIG+ + + ++A + I + R D
Sbjct: 244 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF--EEKKLPIHHIPGPEGVRGRN-SDNNL 300
Query: 298 LKQ-LGWYERVTWEEGLQKTMKWYISNPDWW 327
+K+ LGW + +EGL+ T W +
Sbjct: 301 IKEKLGWAPNMRLKEGLRITYFWIKEQIEKE 331
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 47.6 bits (112), Expect = 3e-06
Identities = 42/300 (14%), Positives = 90/300 (30%), Gaps = 48/300 (16%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG------------------IPFEYGKGRLENRSQLLAD 427
K I G G+I +++ + +G E+ L L
Sbjct: 17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV 76
Query: 428 IQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATG 486
+ V A + + +++ + N + + + + R NG+ ++
Sbjct: 77 TEGVDHVFNLAAD----MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132
Query: 487 CIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR---V 538
CI+ + + + P + K EEL K Y+ R +
Sbjct: 133 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNI 192
Query: 539 RMPISSDLNNPRNFITKISRYNKVVNIPN----------SMTILDELLPISVEMAKRNLS 588
P + R + S T +DE + + + K +
Sbjct: 193 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 252
Query: 589 GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEF 648
N + +VS NE+ EM ++ + + E + + D + +K++
Sbjct: 253 EPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNS-------DNNLIKEKL 305
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 164 bits (414), Expect = 1e-45
Identities = 67/332 (20%), Positives = 111/332 (33%), Gaps = 14/332 (4%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSP------NFK 61
K LITG G S++ L+G Y++ L + N + +N + P K
Sbjct: 2 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK 59
Query: 62 FIKGDVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI 121
D+ A + + K D + + AAQ+HV SF G LLEA +
Sbjct: 60 LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 119
Query: 122 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 181
E E + P +PY+A+K A + Y +YGL
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 179
Query: 182 VITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPI-HGDGSNVRSYLYCEDVAEAFD 237
N P + F + I + + G + G+ R + + D EA
Sbjct: 180 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 239
Query: 238 TILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPD-TQIKFVENRPFNDQRYFLDVQ 296
+L + + + + L D +I RP D
Sbjct: 240 LMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDAS 299
Query: 297 KLKQ-LGWYERVTWEEGLQKTMKWYISNPDWW 327
K K+ LGW +V +E+ ++ + +
Sbjct: 300 KAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 331
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 158 bits (398), Expect = 4e-43
Identities = 76/380 (20%), Positives = 133/380 (35%), Gaps = 66/380 (17%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS----------- 57
+L+ G AG+I SH L+ + + +V++D L + +R +
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 58 ------PNFKFIKGDVASADLVHFI-LLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIY 110
GDV + D ++ + ID ++H A V S + ++ NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 111 GTHVLLEACKITGQIKRFIHVSTDEVYGET---DEDAVVGNHEASQLLPTNPYSATKAGA 167
G LL+A + K S T ++ P +PY +K A
Sbjct: 123 GILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIA 182
Query: 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQ---------FPEKLIPKFI------------- 205
E ++ +YG+ I R N G ++ LIP +
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 206 ---LLAMKGKPLPIHG------DGSNVRSYLYCEDVAEAFDTILHK---------GEVGH 247
A K +PI G DG+ VR Y++ D+A A L +
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYER 306
V+N+GT + V +V K ++ R + K ++ LGW +
Sbjct: 303 VFNLGTSRGYSVREVIEVARKT--TGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPK 360
Query: 307 VTWEEGLQKTM-KWYISNPD 325
E + +T K+ ++P+
Sbjct: 361 YDTLEAIMETSWKFQRTHPN 380
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 123 bits (308), Expect = 3e-31
Identities = 67/334 (20%), Positives = 116/334 (34%), Gaps = 21/334 (6%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K + +TG GF + L K L S + R++ + GD+
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---RVADGMQSEIGDI 65
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
+ + + + + + H AAQ V S+ E N+ GT LLEA + G +K
Sbjct: 66 RDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKA 125
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR---------SY 178
+++++D+ Y + +EA +PYS +K AE++ +Y +
Sbjct: 126 VVNITSDKCYDNKEWIWGYRENEAMG--GYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 183
Query: 179 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDT 238
G V T R NV G + I IL A + I + +R + + + +
Sbjct: 184 GTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL 243
Query: 239 ILHKGEVGHVYNIGTKKERRVIDVATDICKLFS-----LNPDTQIKFVEN-RPFNDQRYF 292
+ K AT + + + N P
Sbjct: 244 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLK 303
Query: 293 LDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPD 325
LD K K LGW+ R L+ + W+ +
Sbjct: 304 LDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLS 337
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 105 bits (261), Expect = 3e-25
Identities = 54/333 (16%), Positives = 97/333 (29%), Gaps = 28/333 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+L+TGA GF+ASHV +L+ + + + + K + +
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE-- 69
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
D++ E I A V + E I GT L A T +KR
Sbjct: 70 ---DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126
Query: 128 FIHVSTDEVYGETDEDA-----------------VVGNHEASQLLPTNPYSATKAGAEML 170
F+ S+ + E+ Y+A+K AE+
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 171 VMAYGRSYGL--PVITTRGNNVYGPNQFPEKL---IPKFILLAMKGKPLPIHGDGSNVRS 225
+ + N G PE +++ G+ P +
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQY 245
Query: 226 YLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRP 285
Y+ D+ L ++ GT V KL+ + +
Sbjct: 246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQD 305
Query: 286 FNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMK 318
+ ++ LK LG + EE ++ +
Sbjct: 306 LSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 103 bits (256), Expect = 1e-24
Identities = 55/345 (15%), Positives = 114/345 (33%), Gaps = 33/345 (9%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
+LI G GFI +H+ RL+ Y++ LD ++ P+F F++GD++
Sbjct: 2 RVLILGVNGFIGNHLTERLL-REDHYEVYGLDIGSD-----AISRFLNHPHFHFVEGDIS 55
Query: 69 S-ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
++ + + + + + A + I
Sbjct: 56 IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFP 115
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT--- 184
+ ++ P YS +K + ++ AYG GL
Sbjct: 116 STSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175
Query: 185 -----TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF--- 236
R +N+ + I + IL ++G P+ + G R + D EA
Sbjct: 176 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235
Query: 237 DTILHKGEVGHVYNIGTKKERRVI-DVATDICKLFSLN-------PDTQIKFVENRPFND 288
G + NIG + I ++ + F + P + VE+ +
Sbjct: 236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 295
Query: 289 QRY------FLDVQKLKQ-LGWYERVTWEEGLQKTMKWYISNPDW 326
+ Y ++ + L W ++ +E + +T+ +++ D
Sbjct: 296 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 340
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 97.7 bits (241), Expect = 2e-22
Identities = 56/371 (15%), Positives = 115/371 (30%), Gaps = 54/371 (14%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSP--------- 58
+++ G G+ L Y++ ++D L L L+P
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59
Query: 59 --------NFKFIKGDVASADLVHFIL---LTEKIDTIMHFAAQTHVDNSFGNSFEFTKN 107
+ + GD+ + + + + + + + N
Sbjct: 60 RWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHN 119
Query: 108 NIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVG----------NHEASQLLPT 157
N+ GT +L A K G+ + + T YG + D G + +
Sbjct: 120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 179
Query: 158 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL----------------- 200
+ Y +K + +++G+ VYG ++
Sbjct: 180 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239
Query: 201 IPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNI--GTKKERR 258
+ +F + A G PL ++G G R YL D + + + + + ++
Sbjct: 240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 299
Query: 259 VIDVATDICKLFS-LNPDTQIKFVEN--RPFNDQRYFLDVQKLKQLGWYERVTWEEGLQK 315
V ++A+ + K S L D + V N + Y KL +LG + L
Sbjct: 300 VNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDS 359
Query: 316 TMKWYISNPDW 326
+ + + D
Sbjct: 360 LLNFAVQFKDR 370
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 85.1 bits (208), Expect = 1e-18
Identities = 50/313 (15%), Positives = 89/313 (28%), Gaps = 10/313 (3%)
Query: 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS 69
I++TG AGFI S++ L + I+V+D L + NL + K D
Sbjct: 2 IIVTGGAGFIGSNIVKALN-DKGITDILVVDNLKDGTKFVNLVDLNI--ADYMDKEDFLI 58
Query: 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFI 129
+ + + T + + + H C +
Sbjct: 59 QIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHY----CLEREIPFLYA 114
Query: 130 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 189
+ +D + + + + + ++L A + G G
Sbjct: 115 SSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPR 174
Query: 190 VYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVY 249
L P G + R ++Y DVA+ L G G
Sbjct: 175 EGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFN 234
Query: 250 NIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRY-FLDVQKLKQLGWYE-RV 307
T + VA I F + Q + D+ L+ G+ +
Sbjct: 235 LG-TGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFK 293
Query: 308 TWEEGLQKTMKWY 320
T EG+ + M W
Sbjct: 294 TVAEGVTEYMAWL 306
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 82.6 bits (202), Expect = 6e-18
Identities = 50/318 (15%), Positives = 91/318 (28%), Gaps = 47/318 (14%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
ILITGA G + + +L G +++ D D+
Sbjct: 3 KILITGANGQLGREIQKQLKGK--NVEVIPTD---------------------VQDLDIT 39
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V+ +K + +++ AA T VD K N G
Sbjct: 40 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPK-----NLAAAAYSVG 94
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 188
+ D +A E ++ P + Y TK E + ++ R
Sbjct: 95 AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN----FVKALNPKYYIVRTA 150
Query: 189 NVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHV 248
+YG K + L + D V + D+A ++ + G
Sbjct: 151 WLYGDGNNFVKTMINLG---KTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEKNYGTF 205
Query: 249 YNIGTKKERRVIDVATDICKLFSLN------PDTQIKFVENRPFNDQRYFLDVQKLKQLG 302
+ D A +I +L ++ + RP L L+
Sbjct: 206 HCTCKGICSW-YDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSV---LRNYMLELTT 261
Query: 303 WYERVTWEEGLQKTMKWY 320
W+E L++ +
Sbjct: 262 GDITREWKESLKEYIDLL 279
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 48.7 bits (114), Expect = 9e-07
Identities = 57/281 (20%), Positives = 96/281 (34%), Gaps = 19/281 (6%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG---IPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGV 442
K LI G G +G + K + K IP + + N + KP V N
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN---C 59
Query: 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIG 502
VD CE + N +G LA G ++ +T +F+ +AK
Sbjct: 60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKE------- 112
Query: 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV 562
E S Y KTK E +K + + + D NN + + + +
Sbjct: 113 PITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDE 172
Query: 563 VNIPN----SMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKW 618
+ + + + T +L + +++ G ++ T G+ S + K
Sbjct: 173 LKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKV 232
Query: 619 TNFTLEEQAKVIVAPRSNNELDASKLKKEF-PELLSIKESL 658
T T EE + P+ + L L+ KESL
Sbjct: 233 TPCTTEEFPRPAKRPK-YSVLRNYMLELTTGDITREWKESL 272
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 78.3 bits (191), Expect = 8e-17
Identities = 34/265 (12%), Positives = 69/265 (26%), Gaps = 23/265 (8%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
+L+TGA+G V +L ++ L + ++ GD+
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-------SAQGKEKIGGEADVFIGDI 56
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
AD ++ + ID ++ + + + + K
Sbjct: 57 TDADSINPA--FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 114
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
I + +G + + Y G P R
Sbjct: 115 QIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF-DTILHKGEVG 246
+ +L+ ++ + DVAE +L +
Sbjct: 174 GGLLDKEGGVRELLVGKDDELLQTDTKTVP-----------RADVAEVCIQALLFEEAKN 222
Query: 247 HVYNIGTKKERRVIDVATDICKLFS 271
+++G+K E D LFS
Sbjct: 223 KAFDLGSKPEGTSTPTK-DFKALFS 246
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 70.7 bits (171), Expect = 6e-14
Identities = 48/326 (14%), Positives = 88/326 (26%), Gaps = 42/326 (12%)
Query: 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68
NIL+ G G + + L P ++ LD + K GD +
Sbjct: 2 NILLFGKTGQVGWELQRSLA---PVGNLIALDV-----------------HSKEFCGDFS 41
Query: 69 SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRF 128
+ V + + D I++ AA T VD E + +
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAANETG 96
Query: 129 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY-GRSYGLPVITTRG 187
V + E P N Y TK E + +
Sbjct: 97 AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYA 156
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247
+ +L + L++ + L + A A L+K EV
Sbjct: 157 GKGNNFAKTMLRLAKERQTLSVINDQYGAP-----TGAELLADCTAHAIRVALNKPEVAG 211
Query: 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYF----------LDVQK 297
+Y++ D A + + + E Y L+ +K
Sbjct: 212 LYHLVAGGTTTWHDYA-ALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEK 270
Query: 298 LKQLGWYERVTWEEGLQKTMKWYISN 323
++ WE G+++ + +
Sbjct: 271 FQRNFDLILPQWELGVKRMLTEMFTT 296
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 39.2 bits (89), Expect = 0.001
Identities = 40/294 (13%), Positives = 87/294 (29%), Gaps = 30/294 (10%)
Query: 386 KFLIYGRTGWIGGLLSKICEKKG------IPFEYGKGRLENRSQLLADIQNVKPTHVFNA 439
L++G+TG +G L + G + + G N + ++ ++P + N
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN- 60
Query: 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGT 499
VD E+ N +A E G +++Y+T +F P
Sbjct: 61 --AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP--- 115
Query: 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRY 559
++E D + + A + L R + NN + ++++
Sbjct: 116 ---WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKE 172
Query: 560 NKVVNIPNSMTILDELLPISVEMAKRNLSGIWNFTNPGVVSH----NEILEMYKAYIDPG 615
+ +++ N + + + N + H A +
Sbjct: 173 RQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFD 232
Query: 616 FKWTNFTLEEQAKVI---------VAPRSNNE-LDASKLKKEF-PELLSIKESL 658
++ A R N L+ K ++ F L + +
Sbjct: 233 EARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGV 286
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 69.4 bits (168), Expect = 2e-13
Identities = 45/338 (13%), Positives = 94/338 (27%), Gaps = 61/338 (18%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKG 65
+LI G G+I + N I + VL + + SN+ + K I+
Sbjct: 4 SRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61
Query: 66 DVASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQI 125
+ + A + + ++I L+EA K G I
Sbjct: 62 SLD-------------DHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNI 108
Query: 126 KRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 185
KRF+ + + + V + +P
Sbjct: 109 KRFLPSEFGMDPDIME--------------HALQPGSITFIDKRKVRRAIEAASIPYTYV 154
Query: 186 RGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245
N G F L + + I+GDG+ ++ +DV + +
Sbjct: 155 SSNMFAGY--FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT 212
Query: 246 GH--VYNIGTKKERRVIDVATDICKL-------FSLNPDTQIKFVENRPF---------- 286
+ +Y +V +L ++ + ++++ +
Sbjct: 213 LNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLY 272
Query: 287 -----NDQRYF-LDVQKLKQLGWYERV---TWEEGLQK 315
D F + ++ Y V T + L++
Sbjct: 273 QIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLER 310
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (132), Expect = 3e-09
Identities = 30/246 (12%), Positives = 58/246 (23%), Gaps = 48/246 (19%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K I I GA G + + Y++ VL + + P+ + DV
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV 61
Query: 68 ASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKR 127
D ++ N T G ++ A K G + +
Sbjct: 62 DKTV--------AGQDAVIVLLG-------TRNDLSPTTVMSEGARNIVAAMKAHG-VDK 105
Query: 128 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 187
+ ++ + + + + ++ G Y
Sbjct: 106 VVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLRESGLKYVA------- 148
Query: 188 NNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE-VG 246
++P I + DG + D+ L E G
Sbjct: 149 ------------VMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196
Query: 247 HVYNIG 252
H
Sbjct: 197 HSTYPS 202
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 55.6 bits (132), Expect = 7e-09
Identities = 46/337 (13%), Positives = 91/337 (27%), Gaps = 64/337 (18%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK-NLNPSRLSPNFKFIKGD 66
IL+ GA G+I HV + ++V + ++ K L S + + G
Sbjct: 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63
Query: 67 VASADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK 126
+ H + V N I +++A K G +K
Sbjct: 64 I-----------------DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK 106
Query: 127 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 186
RF + + + V + G+P
Sbjct: 107 RFFPSEFGNDVDNV---------------HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS 151
Query: 187 GNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVG 246
N G + + + L A + I GDG+ ++ ED+ +
Sbjct: 152 SNCFAGYFL---RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL 208
Query: 247 H--VYNIGTKKERRVIDVATDICKL-------FSLNPDTQIKFVENRPF----------- 286
+ +Y + ++ K + + +K + + PF
Sbjct: 209 NKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHS 268
Query: 287 --------NDQRYFLDVQKLKQLGWYERVTWEEGLQK 315
N + V+ + + T +E L
Sbjct: 269 IFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSN 305
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 49.6 bits (117), Expect = 6e-07
Identities = 38/252 (15%), Positives = 62/252 (24%), Gaps = 45/252 (17%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLS--PNFKFIKG 65
K I + GA G + + + + +LK L L PN +G
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAV--GHHVRAQVH-----SLKGLIAEELQAIPNVTLFQG 56
Query: 66 DVA-SADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQ 124
+ + L+ +F N+ + I L +A K G
Sbjct: 57 PLLNNVPLMD--------------TLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAG- 101
Query: 125 IKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 184
+ S+ + V + V Y R GLP
Sbjct: 102 TIQHYIYSSMPDHSLYGPWPAVPMWA----------------PKFTVENYVRQLGLPSTF 145
Query: 185 TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE-DVAEAFDTIL--- 240
+ + L+ D +L E DV A I
Sbjct: 146 VYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG 205
Query: 241 HKGEVGHVYNIG 252
+ GH +
Sbjct: 206 PQKWNGHRIALT 217
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.7 bits (109), Expect = 2e-06
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK 41
TPK +L+ GA G H+ +R++ K++ +
Sbjct: 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 36
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (99), Expect = 6e-05
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK 41
K++ I GA+G + ++ K+ ++ +
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 48
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 41.6 bits (97), Expect = 2e-04
Identities = 39/261 (14%), Positives = 72/261 (27%), Gaps = 47/261 (18%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSRLSPNFKFIKGD 66
KN++ A G I L+ K V+ D+++ + L L N F D
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYD 63
Query: 67 VAS-----ADLVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEF-TKNNIYGTHVLLEACK 120
V L+ I K I+ A D+ + + T +L+
Sbjct: 64 VTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWD 123
Query: 121 ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 180
I + V G H+ YSA+KA + + +
Sbjct: 124 KRKGGPGGIIANICSVTG------FNAIHQVP------VYSASKAAVVSFTNSLAKLAPI 171
Query: 181 PVIT----------TRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCE 230
+T T + + E + + +L E
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS----------------E 215
Query: 231 DVAEAFDTILHKGEVGHVYNI 251
+ F + + G ++ +
Sbjct: 216 QCGQNFVKAIEANKNGAIWKL 236
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.7 bits (89), Expect = 0.001
Identities = 27/194 (13%), Positives = 56/194 (28%), Gaps = 24/194 (12%)
Query: 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD-KLDYCSNLKNLNPSRLSPNFKFIK 64
+P ++++TGA I + +L+ + I+ ++ + LK++ SR +
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR----VHVLP 57
Query: 65 GDVASAD----LVHFILLTEKIDTIMHFAAQTHVDNSFGNSFEFTKN--------NIYGT 112
V V + D + V S+G + E + N
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 113 HVLLEAC-------KITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165
+L + + + + ++ N S P Y +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 166 GAEMLVMAYGRSYG 179
M
Sbjct: 178 AINMFGRTLAVDLK 191
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 37.7 bits (87), Expect = 0.003
Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 20/177 (11%)
Query: 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV 67
K +LITGAA I ++V D L + + + DV
Sbjct: 6 KAVLITGAAHGIGRATLELFAKE--GARLVACDI-----EEGPLREAAEAVGAHPVVMDV 58
Query: 68 ASADLVHFILLT-----EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT 122
A V ++D ++H+A T + + E + + + +
Sbjct: 59 ADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL--TGSFLVA 116
Query: 123 GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 179
+ T +GN + Y+A+ AG L G
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQA------NYAASMAGVVGLTRTLALELG 167
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 676 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.97 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.96 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.92 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.92 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.89 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.88 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.88 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.87 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.85 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.84 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.84 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.82 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.81 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.8 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.8 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.76 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.75 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.74 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.74 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.74 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.73 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.72 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.72 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.72 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.71 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.71 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.71 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.71 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.7 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.7 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.7 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.7 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.69 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.69 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.69 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.69 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.69 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.69 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.68 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.68 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.68 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.67 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.66 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.65 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.65 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.65 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.65 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.64 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.63 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.63 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.63 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.62 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.61 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.61 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.61 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.61 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.61 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.6 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.59 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.57 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.56 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.56 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.56 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.55 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.55 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.54 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.54 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.54 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.53 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.53 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.53 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.52 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.52 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.52 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.52 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.52 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.52 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.52 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.51 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.51 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.51 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.51 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.51 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.51 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.5 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.5 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.49 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.49 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.49 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.48 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.48 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.48 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.48 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.47 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.47 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.47 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.46 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.46 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.45 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.44 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.43 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.43 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.43 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.42 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.42 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.42 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.41 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.41 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.4 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.4 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.39 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.38 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.38 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.38 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.38 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.37 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.37 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.36 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.36 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.36 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.33 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.33 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.32 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.32 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.3 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.29 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.29 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.26 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.26 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.25 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.24 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.23 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.22 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.18 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.14 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.11 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.11 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.11 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.09 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.06 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.03 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.91 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.89 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.88 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.82 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.71 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.67 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.64 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.47 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.03 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.73 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.73 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.64 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.58 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.57 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.45 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.41 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.39 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.34 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.28 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.28 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.22 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.21 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.17 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.17 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.15 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.08 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.07 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.02 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.98 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.97 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.89 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.88 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.87 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.87 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.86 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.8 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.8 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.73 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.7 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.69 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.68 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.68 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.65 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.63 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.57 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.54 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.41 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.4 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.31 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.31 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.3 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.29 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.28 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.27 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.27 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.27 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.1 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.05 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.98 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.94 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.92 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.88 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.88 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.86 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.85 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.83 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.81 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.8 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.76 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.75 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 95.71 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.57 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.56 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.5 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 95.46 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.39 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.39 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.38 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.37 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.14 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.03 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.01 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.99 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.83 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 94.81 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 94.78 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.72 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 94.61 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.6 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 94.58 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 94.5 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.49 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.41 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 94.27 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.16 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.11 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 93.95 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.95 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 93.92 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.83 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 93.73 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 93.66 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.52 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 93.43 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.03 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.0 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 92.91 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 92.88 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 92.82 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 92.7 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.62 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 92.58 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 92.44 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 92.44 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 92.41 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 92.31 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 92.17 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 91.99 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 91.93 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 91.81 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.7 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.65 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 91.57 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 91.48 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 91.44 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 91.43 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 91.29 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.18 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 91.08 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 91.07 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 91.02 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 91.02 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.93 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 90.88 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 90.74 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 90.73 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 90.68 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 90.59 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 90.54 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 90.53 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 90.52 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 90.47 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.47 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 90.4 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 90.35 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.28 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.2 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.19 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 90.12 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 90.06 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.7 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 89.66 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 89.45 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 89.23 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 89.19 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 89.17 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 88.98 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.96 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.68 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.54 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 88.46 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 88.35 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 88.26 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 88.23 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.06 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.04 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 88.04 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.98 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 87.96 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 87.88 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 87.87 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.86 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 87.72 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.7 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 87.69 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 87.58 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 87.41 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 87.24 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 87.22 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 87.15 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 87.1 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 86.93 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 86.91 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 86.59 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 86.44 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 86.42 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 86.41 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 86.23 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 86.03 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 85.98 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 85.97 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 85.81 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 85.73 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.59 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 85.5 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 85.12 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 85.1 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 85.06 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 84.82 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 84.81 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 84.17 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 84.05 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 83.95 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 83.93 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 83.61 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 83.52 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 83.45 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 83.4 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 83.3 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 83.2 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 83.11 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.07 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.85 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 82.59 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 82.54 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 82.53 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 82.26 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 82.24 | |
| d1iu8a_ | 206 | Pyrrolidone carboxyl peptidase (pyroglutamate amin | 82.23 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 81.88 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 81.59 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 81.48 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 81.47 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 81.45 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 81.37 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 81.34 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 81.24 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 81.21 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 80.89 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 80.89 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 80.61 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 80.57 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 80.42 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 80.41 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 80.4 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 80.32 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 80.23 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 80.06 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 80.04 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=4.7e-47 Score=385.85 Aligned_cols=316 Identities=38% Similarity=0.688 Sum_probs=278.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCc----EEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEY----KIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~----~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
|||||||||||||++|++.|+++|+.+ +++.+++.........+.......+++++.+|+.+........ ..+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc--cccc
Confidence 589999999999999999999997543 6777776554443333333445678999999999999888776 8999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|+|+|+.........++...++.|+.|+.+|+++|++.+ +++|||+||.++||.....+. +|+++..|.++|+.+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~---~E~~~~~p~~~Y~~s 154 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAAS 154 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCB---CTTSCCCCCSHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCC---CCCCCCCCCCHHHHH
Confidence 9999999988777777888899999999999999999987 899999999999998876554 788899999999999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|..+|.+++.++++++++++++||++||||++.+..+++.+++.+..++++.++++|.+.|+|+|++|+|+++..+++++
T Consensus 155 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998878899999999999999999999999999999999999999999998
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 244 ~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
..+++||+++++++++.|+++.+++.+|.+.+. +.....++.....+.+|++|+++ |||+|+++++++|+++++||++
T Consensus 235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~ 313 (322)
T d1r6da_ 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSS-VRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (322)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGG-EEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCeeEEeecccchhHHHHHHHHHHhCCCccc-eeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Confidence 888999999999999999999999999976542 34445566666678899999985 9999999999999999999999
Q ss_pred CCCCcccc
Q 005818 323 NPDWWGDV 330 (676)
Q Consensus 323 ~~~~~~~~ 330 (676)
++.||+.+
T Consensus 314 n~~~~~~~ 321 (322)
T d1r6da_ 314 NRGWWEPL 321 (322)
T ss_dssp CHHHHGGG
T ss_pred hHHhHhhC
Confidence 99999864
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.7e-46 Score=385.20 Aligned_cols=321 Identities=42% Similarity=0.722 Sum_probs=272.9
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||||||||||||++|+++|+++|+. .|+++++.........+.......+++++++|++|++.+..++...++|+|||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999999643 46667765444444444445556789999999999999999997778999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC--------CCceEEEEecccccCCCCCCcCCC-------CCCCC
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG--------QIKRFIHVSTDEVYGETDEDAVVG-------NHEAS 152 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--------~~~~~v~~SS~~vyg~~~~~~~~~-------~~e~~ 152 (676)
+||......+..++...+++|+.|+.+++++|++.+ ++++|||+||..|||........+ ..|..
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 999887766777888999999999999999998754 145899999999999765433221 24567
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
+..|.+.|+.+|..+|.+++.++++++++++++||+.||||+.....+++.+++.+..|+++.++++|++.|+|+|++|+
T Consensus 160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~ 239 (361)
T d1kewa_ 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence 77899999999999999999999999999999999999999988788999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC------cceeeecCCCCCCcccccCHHHHHh-CCCcc
Q 005818 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPD------TQIKFVENRPFNDQRYFLDVQKLKQ-LGWYE 305 (676)
Q Consensus 233 a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~ 305 (676)
|+++..++++...+++|||+++++.++.|+++.+.+.++.... ..+...+.++.....+.+|.+++++ |||+|
T Consensus 240 a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P 319 (361)
T d1kewa_ 240 ARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKP 319 (361)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCC
Confidence 9999999999888889999999999999999999887643221 2344455666666778899999985 99999
Q ss_pred cCCHHHHHHHHHHHHhhCCCCccc
Q 005818 306 RVTWEEGLQKTMKWYISNPDWWGD 329 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~~~~~~~ 329 (676)
+++++++|+++++||+.++.|+..
T Consensus 320 ~~~l~e~i~~ti~w~~~n~~~~~~ 343 (361)
T d1kewa_ 320 LETFESGIRKTVEWYLANTQWVNN 343 (361)
T ss_dssp SCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999998777654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=5.7e-44 Score=366.85 Aligned_cols=318 Identities=37% Similarity=0.626 Sum_probs=273.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+||+|||||||||||++|++.|+++|+.++|+++++.........+ ......+++++.+|++|.+.+..++ ..++.|
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~--~~~~~v 77 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLA--AKADAI 77 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHH--hhhhhh
Confidence 4789999999999999999999999988999998865433222221 1223568999999999999999998 789999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCC---------CcCCCCCCCCCCCC
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDE---------DAVVGNHEASQLLP 156 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~---------~~~~~~~e~~~~~p 156 (676)
+|+|+......+..++.+.+++|+.|+.+++++|+..+ .++|++||..+||.... .......|+++..|
T Consensus 78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p 155 (346)
T d1oc2a_ 78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP 155 (346)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCC
Confidence 99999988766677888999999999999999999987 68999999999986421 11223456778889
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
.++|+.+|..+|.+++.++++++++++++||+.||||.......+..++..+..+..+.+++++.+.++|+|++|+++++
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 99999999999999999999999999999999999998877778888888888888899999999999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccC-CHHHHHH
Q 005818 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERV-TWEEGLQ 314 (676)
Q Consensus 237 ~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~-~~~~~l~ 314 (676)
+.+++++..++.||++++++.++.++++.+.+.++.... .+...+.++.....+.+|++|+++ |||+|++ +++++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~ 314 (346)
T d1oc2a_ 236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLE 314 (346)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHH
T ss_pred HHHHhhcccCccccccccccccchHHHHHHHHHhCCCCc-ceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHH
Confidence 999999988999999999999999999999999987543 345556666666677889999985 9999997 6999999
Q ss_pred HHHHHHhhCCCCccc
Q 005818 315 KTMKWYISNPDWWGD 329 (676)
Q Consensus 315 ~~~~~~~~~~~~~~~ 329 (676)
++++||+++.+||+.
T Consensus 315 ~ti~w~~~n~~~~~~ 329 (346)
T d1oc2a_ 315 ETIQWYTDNQDWWKA 329 (346)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888854
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.6e-44 Score=367.73 Aligned_cols=309 Identities=22% Similarity=0.275 Sum_probs=245.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc---cCCC--CCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL---KNLN--PSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~---~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
|+|||||||||||++|++.|+++ +++|++++|....... +.+. ......+++++++|++|.+++.+++...++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 78999999999999999999999 7899999986432211 1111 123356899999999999999999977789
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChh
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 160 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 160 (676)
|+|||+|+......+.+++...+++|+.||.||+++|++.+ ++++|||+||++|||.....+ .+|+++..|.++|
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~---~~E~~~~~P~~~Y 156 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRSPY 156 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS---BCTTSCCCCCSHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCC---cCCCCCCCCCChH
Confidence 99999999988888889999999999999999999999875 345799999999999765544 3788899999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCC---hHHHHHHHHHCC-CCceeecCCCceEeeeeHHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMKG-KPLPIHGDGSNVRSYLYCEDVAEAF 236 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~ai 236 (676)
+.+|+.+|.+++.|+++++++++++||+++|||...+.. .+...+.....+ .....+|++.+.++|+|++|+++++
T Consensus 157 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~ 236 (357)
T d1db3a_ 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence 999999999999999999999999999999999764432 333344444444 4455678999999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcce----------ee-------------------ecCCCCC
Q 005818 237 DTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQI----------KF-------------------VENRPFN 287 (676)
Q Consensus 237 ~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~----------~~-------------------~~~~~~~ 287 (676)
..++++. .++.||+++++++|+.|+++.+.+.+|....... .. ...+|..
T Consensus 237 ~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 315 (357)
T d1db3a_ 237 WMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAE 315 (357)
T ss_dssp HHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC
T ss_pred HHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcc
Confidence 9999875 4679999999999999999999999885432100 00 0012233
Q ss_pred CcccccCHHHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 288 DQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 288 ~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
...+.+|++|+++ |||+|+++++++|++++++..+
T Consensus 316 ~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~ 351 (357)
T d1db3a_ 316 VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351 (357)
T ss_dssp -CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 3445679999985 9999999999999999876554
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-43 Score=352.57 Aligned_cols=302 Identities=29% Similarity=0.465 Sum_probs=251.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|||||||||||||++|++.|+++ +++|+++++..... ...+........+++...|+.+ .++ .++|+||
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~-~~~~~~~~~~~~~d~~~~~~~~-----~~~--~~~d~Vi 70 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGR-KRNVEHWIGHENFELINHDVVE-----PLY--IEVDQIY 70 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCC-GGGTGGGTTCTTEEEEECCTTS-----CCC--CCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCC-HHHHHHhcCCCceEEEehHHHH-----HHH--cCCCEEE
Confidence 489999999999999999999999 68888888743221 1122222233456666666643 233 5899999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCC--CCCCCCCCCCChhHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVG--NHEASQLLPTNPYSATK 164 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~--~~e~~~~~p~~~Y~~sK 164 (676)
|+|+......+..++...+++|+.|+.+|+++|++.+ .+|||+||.+|||.....+..+ ..+.++..|.++|+.+|
T Consensus 71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK 148 (312)
T d2b69a1 71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK 148 (312)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHH
T ss_pred ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHH
Confidence 9999887666667888999999999999999999987 4899999999999876554322 23446777899999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
..+|.+++.|+++++++++++||++||||+... ..+++.+++.+..|+++.+++++.+.++|+|++|++++++.++++
T Consensus 149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~ 228 (312)
T d2b69a1 149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 228 (312)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998744 358899999999999999999999999999999999999999977
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH-hCCCcccCCHHHHHHHHHHHHh
Q 005818 243 GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYI 321 (676)
Q Consensus 243 ~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~~~~~~~~~l~~~~~~~~ 321 (676)
.. ++.||++++.+.++.++++.+++.++.+.+ +.+.+.++.....+..|++|++ .|||+|+++++++|+++++||+
T Consensus 229 ~~-~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~ 305 (312)
T d2b69a1 229 NV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305 (312)
T ss_dssp SC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred cc-CCceEecCCcccchhhHHHHHHHHhCCCCc--eEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 64 668999999999999999999999998654 4555566656666788999997 5899999999999999999998
Q ss_pred hC
Q 005818 322 SN 323 (676)
Q Consensus 322 ~~ 323 (676)
++
T Consensus 306 ~~ 307 (312)
T d2b69a1 306 KE 307 (312)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.5e-42 Score=353.97 Aligned_cols=310 Identities=27% Similarity=0.396 Sum_probs=261.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-----ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-----LKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+++|+|||||||||||++|+++|+++ +++|+++++...... ............++++.+|+.|...+....
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-- 89 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-- 89 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc--
Confidence 45689999999999999999999999 789999987543211 011111223457899999999999988877
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCCh
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 159 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 159 (676)
..++.|+|+++......+..++...++.|+.|+.+|+++|++.+ +++|||+||..+||.....+. +|+++..|.+.
T Consensus 90 ~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~---~E~~~~~p~~~ 165 (341)
T d1sb8a_ 90 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPK---VEDTIGKPLSP 165 (341)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSB---CTTCCCCCCSH
T ss_pred ccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCc---cCCCCCCCCCc
Confidence 89999999999887666778888999999999999999999987 899999999999998766544 78889999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 160 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 160 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|+.+|..+|.+++.++++++++++++||++|||++..+. .+++.+++.+..|+++.++++|.+.|+|+|++|++.+
T Consensus 166 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a 245 (341)
T d1sb8a_ 166 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 245 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchh
Confidence 999999999999999999999999999999999976433 5788889999999999999999999999999999999
Q ss_pred HHHHHhcCC--CCceEEEcCCCcccHHHHHHHHHHHhCCCCC---cceeeecCCCCCCcccccCHHHHHh-CCCcccCCH
Q 005818 236 FDTILHKGE--VGHVYNIGTKKERRVIDVATDICKLFSLNPD---TQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTW 309 (676)
Q Consensus 236 i~~~~~~~~--~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~ 309 (676)
+..++..+. .+++||+++++..|+.|+++.+.+.++.+.. ......+.++.......+|++|+++ |||+|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl 325 (341)
T d1sb8a_ 246 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDV 325 (341)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCH
T ss_pred hhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCH
Confidence 999887543 5779999999999999999999998875432 1222333444445556789999986 999999999
Q ss_pred HHHHHHHHHHHhh
Q 005818 310 EEGLQKTMKWYIS 322 (676)
Q Consensus 310 ~~~l~~~~~~~~~ 322 (676)
+++|+++++||++
T Consensus 326 ~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 326 SAGVALAMPWYIM 338 (341)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-41 Score=348.01 Aligned_cols=313 Identities=27% Similarity=0.435 Sum_probs=254.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|||||||||||||++|++.|+++ +++|++++|.......... .......+++++++|++|.+.+.++++..++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 57999999999999999999999 6888888875432211000 00112357999999999999999999777999999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+|+......+..++...+++|+.|+.+|+++|++.+ +++||++||.++|+........ +++....|.++|+.+|..
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~--e~~~~~~p~~~Y~~sK~~ 155 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYV--ESFPTGTPQSPYGKSKLM 155 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBC--TTSCCCCCSSHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccc--cccccCCCcchHHHHHhh
Confidence 9999877666777888999999999999999999988 9999999999999877654431 334456789999999999
Q ss_pred HHHHHHHHHHH-cCCCEEEEeeCCccCCCCC----------CCChHHHHHHHHHCC-CCceeecC------CCceEeeee
Q 005818 167 AEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMKG-KPLPIHGD------GSNVRSYLY 228 (676)
Q Consensus 167 ~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~v~ 228 (676)
+|.++.++..+ .+++++++|++++||++.. ...+++.+...+..+ .++.++|+ +.+.|+|+|
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~ 235 (338)
T d1udca_ 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence 99999976665 4899999999999998542 124677777766554 45666553 788899999
Q ss_pred HHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCc
Q 005818 229 CEDVAEAFDTILHK---GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWY 304 (676)
Q Consensus 229 v~D~a~ai~~~~~~---~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~ 304 (676)
++|++.++..+.+. ...+++||++++.++|+.|+++.+.+.+|.+.+ +.+.+.++.....+.+|++|+++ |||+
T Consensus 236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgwk 313 (338)
T d1udca_ 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELNWR 313 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCc--eEECCCCCCCCCEeeECHHHHHHHHCCC
Confidence 99999988877653 234578999999999999999999999997654 45556666666777899999985 9999
Q ss_pred ccCCHHHHHHHHHHHHhhCCCCc
Q 005818 305 ERVTWEEGLQKTMKWYISNPDWW 327 (676)
Q Consensus 305 ~~~~~~~~l~~~~~~~~~~~~~~ 327 (676)
|+++++++|+++++|++++++|+
T Consensus 314 p~~~l~egi~~ti~w~~~~~~~~ 336 (338)
T d1udca_ 314 VTRTLDEMAQDTWHWQSRHPQGY 336 (338)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCS
T ss_pred cCCCHHHHHHHHHHHHHhchhhC
Confidence 99999999999999999997664
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.2e-41 Score=343.04 Aligned_cols=309 Identities=20% Similarity=0.248 Sum_probs=258.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|||||||||||++|++.|+++ +++|++++|.........+......++++++.+|++|.+.+.+.+....+++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 68999999999999999999999 7899999987544333323223345679999999999999999987778999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+.........++...+..|+.|+.+++++|++.+..++|+++||..+||....... +|+++..|.++|+.+|..+
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~---~E~~~~~p~~~Y~~sK~~~ 155 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ---DENTPFYPRSPYGVAKLYG 155 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSB---CTTSCCCCCSHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCC---CCCCCccccChhHHHHHHH
Confidence 9998887777788889999999999999999999886678999999999987765543 6888999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCCh---HHHHHHHHHC-CCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMK-GKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|.+++.|+++++++++++||+++|||....... +..++..... +.+...++++.+.|+|+|++|+|+++..+++++
T Consensus 156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence 999999999999999999999999997654432 2233334444 445556799999999999999999999999887
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeec--CCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHHHHHH
Q 005818 244 EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVE--NRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWY 320 (676)
Q Consensus 244 ~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~ 320 (676)
. ++.||+++++..++.++++.+.+.+|.+.+..+...+ .+|.....+..|++|+++ |||+|+++++++|++|++|+
T Consensus 236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~ 314 (321)
T d1rpna_ 236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEAD 314 (321)
T ss_dssp S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 5 4679999999999999999999999886544444332 344455667889999986 89999999999999999998
Q ss_pred hh
Q 005818 321 IS 322 (676)
Q Consensus 321 ~~ 322 (676)
++
T Consensus 315 l~ 316 (321)
T d1rpna_ 315 LR 316 (321)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1e-39 Score=337.54 Aligned_cols=304 Identities=22% Similarity=0.274 Sum_probs=250.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+.|||||||||||||++|++.|+++ +++|+++++...... .......++..+|+.+.+.+.+++ .++|+|
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~V 83 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVT--EGVDHV 83 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHh--hcCCeE
Confidence 4689999999999999999999999 688888887543221 112235688889999999999988 789999
Q ss_pred EEccccCCcCC-cCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCC----CCCCCCCCCCChh
Q 005818 86 MHFAAQTHVDN-SFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVG----NHEASQLLPTNPY 160 (676)
Q Consensus 86 ih~a~~~~~~~-~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~----~~e~~~~~p~~~Y 160 (676)
||+|+...... ....+......|+.++.+++++|++.+ +++|||+||..+|+.....+... ..|..+..|.++|
T Consensus 84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 162 (363)
T d2c5aa1 84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 162 (363)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHH
Confidence 99998766432 345677889999999999999999988 99999999999999776544322 2456777899999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC-----ChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 161 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 161 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
+.+|..+|++++.+.+.+|++++++||+++||+..... ..................+++|.+.|+|+|++|++++
T Consensus 163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~ 242 (363)
T d2c5aa1 163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence 99999999999999999999999999999999976322 2333444556677778888999999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHH
Q 005818 236 FDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQ 314 (676)
Q Consensus 236 i~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~ 314 (676)
++.+++++ .+++||++++..+|+.|+++.+.+.+|.+.+ +...+ .+.......+|++|+++ |||+|+++++++|+
T Consensus 243 ~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~--i~~~~-~~~~~~~~~~d~ska~~~LGw~p~~sleegi~ 318 (363)
T d2c5aa1 243 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIP-GPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 318 (363)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC--EEEEC-CCCCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCc--eEeCC-CCCCccccccCHHHHHHHhCCCCCCCHHHHHH
Confidence 99999865 5779999999999999999999999988654 33333 33344556789999985 99999999999999
Q ss_pred HHHHHHhhCC
Q 005818 315 KTMKWYISNP 324 (676)
Q Consensus 315 ~~~~~~~~~~ 324 (676)
++++||+++.
T Consensus 319 ~ti~w~~~~~ 328 (363)
T d2c5aa1 319 ITYFWIKEQI 328 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-39 Score=334.22 Aligned_cols=316 Identities=23% Similarity=0.347 Sum_probs=255.7
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-------CCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-------PSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-------~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|.+||||||||||||++|+++|+++ +++|+++|+........... ......+++++++|++|.+.+.+++.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 78 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccc
Confidence 3479999999999999999999999 67888887643221100000 01124578999999999999999987
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
...+++|+|+|+......+..++.+.++.|+.|+.+++++|++.+ +++|||+||..+|+....... ..+.....|.+
T Consensus 79 ~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~--~~~~~~~~~~~ 155 (346)
T d1ek6a_ 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPL--DEAHPTGGCTN 155 (346)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSB--CTTSCCCCCSS
T ss_pred ccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccc--cccccccccCC
Confidence 788999999999988777777888999999999999999999988 999999999999998765433 23334456788
Q ss_pred hhHHHHHHHHHHHHHHHHH-cCCCEEEEeeCCccCCCCC----------CCChHHHHHHHHH-CCCCceeec------CC
Q 005818 159 PYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAM-KGKPLPIHG------DG 220 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~----------~~~~~~~~~~~~~-~~~~~~~~~------~~ 220 (676)
+|+.+|..+|..+.++++. .+++.+++|++.+||+... ...+++.+...+. ++.++.+.+ ++
T Consensus 156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g 235 (346)
T d1ek6a_ 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence 9999999999999998776 4899999999999998532 2346666666554 455555543 46
Q ss_pred CceEeeeeHHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHH
Q 005818 221 SNVRSYLYCEDVAEAFDTILHK---GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQK 297 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~---~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 297 (676)
.+.|+|+|++|+|.++..+++. ...+++||+++++..++.|+++.+.+.+|.+.+ +.+.+.++.+...+.+|++|
T Consensus 236 ~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~--~~~~~~~~~e~~~~~~d~~k 313 (346)
T d1ek6a_ 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANPSL 313 (346)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHH
T ss_pred CeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC--eEECCCCCCCCCEeeECHHH
Confidence 7889999999999999887654 335578999999999999999999999998664 45566677667778899999
Q ss_pred HHh-CCCcccCCHHHHHHHHHHHHhhCCCCcc
Q 005818 298 LKQ-LGWYERVTWEEGLQKTMKWYISNPDWWG 328 (676)
Q Consensus 298 ~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (676)
+++ |||+|+++++++|+++++||+++++|++
T Consensus 314 ~~~~lgw~p~~slee~I~~~i~w~~~n~~~~~ 345 (346)
T d1ek6a_ 314 AQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345 (346)
T ss_dssp HHHTTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHCCCcCCCHHHHHHHHHHHHHhCHhhcC
Confidence 986 9999999999999999999999998864
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-39 Score=332.98 Aligned_cols=309 Identities=23% Similarity=0.252 Sum_probs=248.5
Q ss_pred CeE-EEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc---cCC---CCCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 8 KNI-LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL---KNL---NPSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 8 ~~v-lVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~---~~~---~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
||| ||||||||||++|++.|+++ +++|++++|....... +.+ .......+++++.+|++|++.+..++...
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99999999999999999999 7899999986432211 111 11222357899999999999999999888
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG--QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 158 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 158 (676)
++++|+|+++......+..++...+++|+.||.+|+++|++++ +.++|||+||++|||.....+. .|+++..|.+
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~---~E~~~~~P~~ 155 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQ---KETTPFYPRS 155 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSB---CTTSCCCCCS
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCC---CCCCCCCCCC
Confidence 9999999999887766777888889999999999999999876 2458999999999997665443 7889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCCh----HHHHHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 159 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL----IPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 159 ~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
+|+.+|..+|++++.++++++++++++||+.+|||....... ...+......+.++..++++.+.++|+|++|++.
T Consensus 156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~ 235 (347)
T d1t2aa_ 156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence 999999999999999999999999999999999997654432 3334455566777888899999999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc------eee-------------ecCCCCCCcccccCH
Q 005818 235 AFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQ------IKF-------------VENRPFNDQRYFLDV 295 (676)
Q Consensus 235 ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~------~~~-------------~~~~~~~~~~~~~~~ 295 (676)
++..++++... +.|+++.+...++.+....+...++...... +.. ...+|.....+.+|+
T Consensus 236 a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~ 314 (347)
T d1t2aa_ 236 AMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 314 (347)
T ss_dssp HHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred HHHHHhhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECH
Confidence 99999988653 5788999999999999999998888753210 000 012333445567899
Q ss_pred HHHHh-CCCcccCCHHHHHHHHHHHHhh
Q 005818 296 QKLKQ-LGWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 296 ~k~~~-lg~~~~~~~~~~l~~~~~~~~~ 322 (676)
+|+++ |||+|+++++++|++|+++..+
T Consensus 315 skak~~Lgw~P~~sl~e~i~~~I~~~~~ 342 (347)
T d1t2aa_ 315 TKAKQKLNWKPRVAFDELVREMVHADVE 342 (347)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 99985 9999999999999999876543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.1e-39 Score=340.93 Aligned_cols=317 Identities=18% Similarity=0.240 Sum_probs=246.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-----cccCCCCC------------CCCCCeEEEEecCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-----NLKNLNPS------------RLSPNFKFIKGDVAS 69 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-----~~~~~~~~------------~~~~~v~~v~~Dl~d 69 (676)
+|||||||||||||++|++.|+++ +++|+++|...... ....+... ....+++++++||+|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence 489999999999999999999999 68899887421100 00011110 123578999999999
Q ss_pred HHHHHHHHccCCCCEEEEccccCCcCCcCCC---hHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCC
Q 005818 70 ADLVHFILLTEKIDTIMHFAAQTHVDNSFGN---SFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 70 ~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.+.+.+++...++|+|||+|+......+..+ +...+..|+.||.+++++|++.+..++|+++||..+|+.......+
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~ 158 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 158 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence 9999999977789999999998775554444 3467899999999999999998855678888998888865532211
Q ss_pred ----------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC-----------------CC
Q 005818 147 ----------GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----------------EK 199 (676)
Q Consensus 147 ----------~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~-----------------~~ 199 (676)
.+.+..+..|.++|+.+|..+|.+++.++++++++++++||++||||+..+ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 238 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence 012234677889999999999999999999999999999999999997532 23
Q ss_pred hHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCceEEE--cCCCcccHHHHHHHHHHHhCC---CC
Q 005818 200 LIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNI--GTKKERRVIDVATDICKLFSL---NP 274 (676)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i--~~~~~~s~~el~~~i~~~~g~---~~ 274 (676)
++..++..+..++++.++|++.+.|+|+|++|+++++..+++++...+.|++ ++++..|+.|+++.+.+..+. ..
T Consensus 239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~ 318 (393)
T d1i24a_ 239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV 318 (393)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence 5778888889999999999999999999999999999999998766555544 455779999999998887643 22
Q ss_pred CcceeeecCCCCCCcccccCHHHHHhCCCcccCCHHHHHHHHHHHHhhCCC
Q 005818 275 DTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPD 325 (676)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~ 325 (676)
.......+..+.....+..|.+++++|||+|+++++++++++++|++++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~ 369 (393)
T d1i24a_ 319 KKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKD 369 (393)
T ss_dssp CEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred ceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHHH
Confidence 221111223334445567889999999999999999999999999988753
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.1e-39 Score=332.37 Aligned_cols=308 Identities=21% Similarity=0.318 Sum_probs=244.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||||||||||||++|++.|+++| .++|+++++..... ......++++++++|+++.+.+.+.+. .++|+|||
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~~~-----~~~~~~~~~~~i~~Di~~~~~~~~~~~-~~~d~Vih 73 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAI-----SRFLNHPHFHFVEGDISIHSEWIEYHV-KKCDVVLP 73 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGG-----GGGTTCTTEEEEECCTTTCSHHHHHHH-HHCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCcch-----hhhccCCCeEEEECccCChHHHHHHHH-hCCCcccc
Confidence 589999999999999999999995 36899998754221 111225689999999998877665442 57999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCC----CCCCCCCCCChhHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGN----HEASQLLPTNPYSAT 163 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~----~e~~~~~p~~~Y~~s 163 (676)
+|+.........++...+..|+.|+.+++++|.+.+ .+++|.||..+|+.......... .+.....|.+.|+.+
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~s 151 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred ccccccccccccCCcccccccccccccccccccccc--ccccccccccccccccccccccccccccccccCCCcchhhhc
Confidence 999988766677788899999999999999999977 57789999999998765543221 222334567889999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCC--------CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHH
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEA 235 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 235 (676)
|..+|.+++.++++++++++++|++.+||+.... ...+..++..++.|+++.++++|.+.++|+|++|++++
T Consensus 152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a 231 (342)
T d2blla1 152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 231 (342)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence 9999999999999999999999999999985422 23577888999999999999999999999999999999
Q ss_pred HHHHHhcC---CCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcce-------ee------ecCCCCCCcccccCHHHH
Q 005818 236 FDTILHKG---EVGHVYNIGTKK-ERRVIDVATDICKLFSLNPDTQI-------KF------VENRPFNDQRYFLDVQKL 298 (676)
Q Consensus 236 i~~~~~~~---~~~~~y~i~~~~-~~s~~el~~~i~~~~g~~~~~~~-------~~------~~~~~~~~~~~~~~~~k~ 298 (676)
+..+++++ ..+++||+++++ .+|+.|+++.+.+.++....... .. ............+|++|+
T Consensus 232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 311 (342)
T d2blla1 232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 311 (342)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHH
T ss_pred eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHH
Confidence 99999863 346799998765 58999999999999886643211 00 000111112345799999
Q ss_pred Hh-CCCcccCCHHHHHHHHHHHHhhCC
Q 005818 299 KQ-LGWYERVTWEEGLQKTMKWYISNP 324 (676)
Q Consensus 299 ~~-lg~~~~~~~~~~l~~~~~~~~~~~ 324 (676)
++ |||+|+++++++|+++++||+++.
T Consensus 312 ~~~lgw~P~~sleegl~~ti~~y~~~~ 338 (342)
T d2blla1 312 HRCLDWEPKIDMQETIDETLDFFLRTV 338 (342)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence 85 999999999999999999998864
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-39 Score=332.77 Aligned_cols=316 Identities=27% Similarity=0.380 Sum_probs=247.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC-CCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL-NPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|.|||||||||||++|++.|+++ +++|+++++.......... .......+++++++|++|.+.+..++...++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 56999999999999999999999 6888888765432110000 00112357899999999999999998778999999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCc-CCCCCCCCCCCCCChhHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA-VVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~-~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
|+|+........+++.....+|+.++.+|+++|++.+ +++||++||..|||.....+ ..+..|+.+..|.++|+.+|.
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 158 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHH
Confidence 9999887666667788899999999999999999987 99999999999999876543 234577788889999999999
Q ss_pred HHHHHHHHHHHH--cCCCEEEEeeCCccCCCC----------CCCChHHHHHHHHHC-CCCceeecCC------CceEee
Q 005818 166 GAEMLVMAYGRS--YGLPVITTRGNNVYGPNQ----------FPEKLIPKFILLAMK-GKPLPIHGDG------SNVRSY 226 (676)
Q Consensus 166 ~~E~~~~~~~~~--~~l~~~ilR~~~i~G~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~ 226 (676)
.+|++++++.+. ++++++++|++.+||+.. .+..+++.+...+.. +.++.+++++ ...+++
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 999999998764 479999999999998743 123467676666653 4556665544 457789
Q ss_pred eeHHHHHHHHHHHHhc-------CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHH
Q 005818 227 LYCEDVAEAFDTILHK-------GEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLK 299 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~-------~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 299 (676)
+++.|.+.+++.+++. ...+++||+++++++|+.|+++.+.+.+|.+.+. ...+.++.....+.+|++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~d~sk~~ 316 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY--KVTGRRAGDVLNLTAKPDRAK 316 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------CCCCCBCCHHHH
T ss_pred eeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCce--EeCCCCCCCCCEeeECHHHHH
Confidence 9999999999888753 1235789999999999999999999999987653 333444445556778999998
Q ss_pred h-CCCcccCCHHHHHHHHHHHHhhCCCCcc
Q 005818 300 Q-LGWYERVTWEEGLQKTMKWYISNPDWWG 328 (676)
Q Consensus 300 ~-lg~~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (676)
+ |||+|+++++++|+++++|+++++.|++
T Consensus 317 ~~lGw~p~~~lee~i~~ti~w~~~np~~~~ 346 (347)
T d1z45a2 317 RELKWQTELQVEDSCKDLWKWTTENPFGYQ 346 (347)
T ss_dssp HHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhChhcCc
Confidence 5 9999999999999999999999976654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=5.7e-38 Score=326.60 Aligned_cols=315 Identities=24% Similarity=0.359 Sum_probs=248.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc-----------------CCCCCCCCCCeEEEEecCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK-----------------NLNPSRLSPNFKFIKGDVAS 69 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~-----------------~~~~~~~~~~v~~v~~Dl~d 69 (676)
.|||||||||||||++|+++|++++ +++|+++|+........ .........++.++.+|++|
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~-~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhC-CCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence 3689999999999999999999754 78999987532211100 01112234568999999999
Q ss_pred HHHHHHHHccC-CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcC---
Q 005818 70 ADLVHFILLTE-KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAV--- 145 (676)
Q Consensus 70 ~~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~--- 145 (676)
.+.+++++... ++|+|||+|+.........++...+..|+.++.+++++++..+ +++++++||..+|+.......
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~ 159 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccc
Confidence 99999998554 6799999999887766666777889999999999999999987 899999999999987654322
Q ss_pred -CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC---------ChHHHHHHHHH------
Q 005818 146 -VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---------KLIPKFILLAM------ 209 (676)
Q Consensus 146 -~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~---------~~~~~~~~~~~------ 209 (676)
.+..|+.+..|.++|+.+|..+|.+++.+.+.+|++++++|++++|||+.... .+++.++..+.
T Consensus 160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 23456778889999999999999999999999999999999999999987432 33444433322
Q ss_pred ----------CCCCceeec------CCCceEeeeeHHHHHHHHHHHHhc---------CCCCceEEEcCCCcccHHHHHH
Q 005818 210 ----------KGKPLPIHG------DGSNVRSYLYCEDVAEAFDTILHK---------GEVGHVYNIGTKKERRVIDVAT 264 (676)
Q Consensus 210 ----------~~~~~~~~~------~~~~~~~~v~v~D~a~ai~~~~~~---------~~~~~~y~i~~~~~~s~~el~~ 264 (676)
.+.++.+++ +|.+.|+|+|++|++++++.+++. ...+++||+++++++++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 334455554 478899999999999999998864 1235689999999999999999
Q ss_pred HHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcccCCHHHHHHHH-HHHHhhCCC
Q 005818 265 DICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYERVTWEEGLQKT-MKWYISNPD 325 (676)
Q Consensus 265 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~-~~~~~~~~~ 325 (676)
.+.+.+|.+.+ +...+.++.+...+.+|++|+++ |||+|+++++++|+++ ++|++.+++
T Consensus 320 ~i~~~~~~~~~--~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~ 380 (383)
T d1gy8a_ 320 VARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN 380 (383)
T ss_dssp HHHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred HHHHHhCCCCc--eEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCcc
Confidence 99999998654 44445556555667889999986 9999999999999887 589998764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-38 Score=322.59 Aligned_cols=292 Identities=23% Similarity=0.398 Sum_probs=238.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|||||||||||||++|++.|+++ ++.++++++.. ..|+.|.+.+..++....+|+|+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~d~v~ 59 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVY 59 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCch--------------------hccccCHHHHHHHHhhcCCCEEE
Confidence 579999999999999999999999 56777665532 25899999999998878899999
Q ss_pred EccccCCcC-CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCC--CCCCCCCCCChhHHH
Q 005818 87 HFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGN--HEASQLLPTNPYSAT 163 (676)
Q Consensus 87 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~--~e~~~~~p~~~Y~~s 163 (676)
|+|+..... ....++.+.+..|+.||.+|+++|++.+ +++|||+||.+|||.....+..+. .+..+..|.++|+.+
T Consensus 60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~s 138 (315)
T d1e6ua_ 60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIA 138 (315)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHH
Confidence 999776532 2344566788999999999999999987 999999999999998765443211 112233345679999
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHH-----HHHHHHCCCCceeecCCCceEeeeeHHHHHH
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPK-----FILLAMKGKPLPIHGDGSNVRSYLYCEDVAE 234 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 234 (676)
|..+|++++.|++++|++++++||++||||+.... .+... .......+..+.+.+++...++|+|++|++.
T Consensus 139 K~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~ 218 (315)
T d1e6ua_ 139 KIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218 (315)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHH
Confidence 99999999999999999999999999999976432 22222 3345567788888999999999999999999
Q ss_pred HHHHHHhcC---------CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHhCCCcc
Q 005818 235 AFDTILHKG---------EVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYE 305 (676)
Q Consensus 235 ai~~~~~~~---------~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~~ 305 (676)
++..+++.. .....++++.+...++.++++.+.+.+|... .+.+.+.++.....+.+|++|+++|||+|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~--~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p 296 (315)
T d1e6ua_ 219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG--RVVFDASKPDGTPRKLLDVTRLHQLGWYH 296 (315)
T ss_dssp HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS--EEEEETTSCCCCSBCCBCCHHHHHTTCCC
T ss_pred HHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCc--ceEECCCCCCCCceeccCHHHHHHcCCCC
Confidence 999988643 2346799999999999999999999999865 35556666766667789999999999999
Q ss_pred cCCHHHHHHHHHHHHhhC
Q 005818 306 RVTWEEGLQKTMKWYISN 323 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~~ 323 (676)
+++++++|+++++||+++
T Consensus 297 ~~~l~e~i~~ti~w~~~N 314 (315)
T d1e6ua_ 297 EISLEAGLASTYQWFLEN 314 (315)
T ss_dssp CCCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHc
Confidence 999999999999999976
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6.3e-38 Score=321.19 Aligned_cols=310 Identities=22% Similarity=0.235 Sum_probs=249.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccC---CC---CCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN---LN---PSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~---~~---~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
+|+|||||||||||++|++.|+++ +++|++++|......... +. .......++++.+|+.+.+.+...+...
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 479999999999999999999999 789999998643221111 11 1122356889999999999999998778
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcC----CCceEEEEecccccCCCCCCcCCCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITG----QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLP 156 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 156 (676)
++|+|||+|+........+++......|+.++.+++++++... ...++++.||..+|+..... .+|+++..|
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~----~~E~~~~~p 154 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHP 154 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS----BCTTSCCCC
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCC----CCCCCCCCC
Confidence 9999999999988766777888999999999999999997532 24578888888888776533 378889999
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHH----HHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 157 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPK----FILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 157 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
.+.|+.+|..+|.++..++++++++++++||++||||.......... +...........+.+++.+.|+|+|++|+
T Consensus 155 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~ 234 (339)
T d1n7ha_ 155 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234 (339)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence 99999999999999999999999999999999999997654433222 22334455566677899999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceee--ecCCCCCCcccccCHHHHHh-CCCcccCCH
Q 005818 233 AEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKF--VENRPFNDQRYFLDVQKLKQ-LGWYERVTW 309 (676)
Q Consensus 233 a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~-lg~~~~~~~ 309 (676)
++++..+++++..+ .+++..+...++.++++.+.+.++......+.. ...++.....+..|++|+++ |||+|++++
T Consensus 235 a~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~l 313 (339)
T d1n7ha_ 235 VEAMWLMLQQEKPD-DYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF 313 (339)
T ss_dssp HHHHHHHHTSSSCC-EEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred HHHHHHHHhcCCCC-ccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCH
Confidence 99999999987654 566778888999999999999998765433332 23445555667789999985 899999999
Q ss_pred HHHHHHHHHHHhhC
Q 005818 310 EEGLQKTMKWYISN 323 (676)
Q Consensus 310 ~~~l~~~~~~~~~~ 323 (676)
+++|++|++||++.
T Consensus 314 e~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 314 EKLVKMMVDEDLEL 327 (339)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.8e-39 Score=332.51 Aligned_cols=270 Identities=19% Similarity=0.219 Sum_probs=217.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~d~ 435 (676)
|+|||||||||||++|+++|+++|++| .++++|++|.+.+.+++++++||+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 479999999999999999999999754 567899999999999999999999
Q ss_pred EEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----cEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 436 VFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 436 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|||+||.. .+..+..++..++++|+.||.+|+++|++.++ ++|+.||+.|||.+...| .+|+.+..
T Consensus 82 v~h~aa~~---~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~-------~~E~~~~~ 151 (357)
T d1db3a_ 82 VYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP-------QKETTPFY 151 (357)
T ss_dssp EEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS-------BCTTSCCC
T ss_pred EEEeeccc---ccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCC-------cCCCCCCC
Confidence 99999987 56677889999999999999999999999765 488889999998665555 66777888
Q ss_pred CCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCc-eeccCC-----Cccchhh
Q 005818 512 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNK-VVNIPN-----SMTILDE 574 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~-~~~~~~-----~~~~v~D 574 (676)
|.++|+.||+.+|++++.+.+.++++++++|++++|||+ .++.+++.+.. .+..++ +|+||+|
T Consensus 152 P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D 231 (357)
T d1db3a_ 152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231 (357)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence 999999999999999999988889999999999999985 23444444444 333332 8999999
Q ss_pred HHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHh-----------------------hhhHhc
Q 005818 575 LLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEE-----------------------QAKVIV 631 (676)
Q Consensus 575 ~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------------------~~~~~~ 631 (676)
+|++++.+++++.++.||+++++.+|+.|+++.+.+.+|....+...+... ......
T Consensus 232 ~~~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (357)
T d1db3a_ 232 YVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYF 311 (357)
T ss_dssp HHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGC
T ss_pred HHHHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccC
Confidence 999999999988889999999999999999999999998543221111000 000111
Q ss_pred cCC--CccccChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 632 APR--SNNELDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 632 ~~~--~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
+|. ....+|++|+++.++|. .+|+++|++++..
T Consensus 312 r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~ 348 (357)
T d1db3a_ 312 RPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN 348 (357)
T ss_dssp CCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred CCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 111 13456999998865555 4999999999853
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=1.8e-37 Score=317.74 Aligned_cols=309 Identities=26% Similarity=0.426 Sum_probs=245.5
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
||||||||||||++|++.|+++ +++|+++++.........+.......+++++.+|++|.+.+.+++...++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999999999999999999999 68898887643322211111112245799999999999999999977789999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec-ccccCCCCCCcC-------------CCCCCCCCC
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST-DEVYGETDEDAV-------------VGNHEASQL 154 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS-~~vyg~~~~~~~-------------~~~~e~~~~ 154 (676)
|+.........++...+++|+.||.||+++|.+.+ ++++|++|| ..+|+.....+. ....+..+.
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 99988766667888999999999999999999988 666555555 444444332211 112344566
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCC---CCChHHHHHHHHH-----CCCCceeecCCCceEee
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF---PEKLIPKFILLAM-----KGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 226 (676)
.|.+.|+.+|...|.++..+.+.+++...++|+..+|++... ....++.++..+. .++++.++++|.+.++|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 788899999999999999999999999999999999987552 2345555555543 36788999999999999
Q ss_pred eeHHHHHHHHHHHHhcC--CCCceEEEcC--CCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-C
Q 005818 227 LYCEDVAEAFDTILHKG--EVGHVYNIGT--KKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-L 301 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~--~~~~~y~i~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-l 301 (676)
+|++|++++++.++++. ..+++|++.. +..+++.|+++.+.+.++.+.+ +...+.++.....+..|++|+++ |
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~L 316 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKKITNAI 316 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHHHHHHH
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce--eEeCCCCCCCcCeeeECHHHHHHHH
Confidence 99999999999998763 2578999954 4568999999999999998764 44455566666678889999985 9
Q ss_pred CCcccCCHHHHHHHHHHHHhh
Q 005818 302 GWYERVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 302 g~~~~~~~~~~l~~~~~~~~~ 322 (676)
||+|+++++++|+++++|++.
T Consensus 317 g~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 317 DWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp CCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHc
Confidence 999999999999999999985
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.4e-38 Score=327.38 Aligned_cols=278 Identities=17% Similarity=0.147 Sum_probs=221.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|||||||||||||++|+++|++.|+++ +++.+|++|.+.+.+++++.+||+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 689999999999999999999999853 4567899999999999999899999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----------cEEEeecCeeeecCCCCCCC---CCCCcccc
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----------LMMNYATGCIFEYDAKHPEG---TGIGFKEE 506 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----------~~v~~sS~~v~~~~~~~~~~---~~~~~~~e 506 (676)
||.+ .+..+..+|..++++|+.|+.+++++|++.++ ++++.||+.||+.....+.. ...++..|
T Consensus 81 Aa~~---~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e 157 (361)
T d1kewa_ 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred cccc---chhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence 9987 67777889999999999999999999988643 69999999999876543311 12345667
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----Cccchh
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILD 573 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~ 573 (676)
+++..|.+.||.||.++|++++.+.+.++++++++|++++|||+ .++.+++.+++....++ +|+|++
T Consensus 158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~ 237 (361)
T d1kewa_ 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence 77888999999999999999999887889999999999999996 45677777776544433 799999
Q ss_pred hHHHHHHHHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhcc--CCCccccChhHHHhhCCC
Q 005818 574 ELLPISVEMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVA--PRSNNELDASKLKKEFPE 650 (676)
Q Consensus 574 D~a~~~~~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~ld~~k~~~~~~~ 650 (676)
|+|++++.++++.. +++||+++++++++.|+++.+.+.++................... ......+|++|+++.++|
T Consensus 238 D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw 317 (361)
T d1kewa_ 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGW 317 (361)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCC
Confidence 99999999999874 469999999999999999999988764332211111111000011 112457899999875454
Q ss_pred C--CCHHHHHHHhhhcc
Q 005818 651 L--LSIKESLIKNVFEP 665 (676)
Q Consensus 651 ~--~~~~~~l~~~~~~~ 665 (676)
. .+++++|++++..+
T Consensus 318 ~P~~~l~e~i~~ti~w~ 334 (361)
T d1kewa_ 318 KPLETFESGIRKTVEWY 334 (361)
T ss_dssp CCSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 4 59999999998754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-39 Score=322.81 Aligned_cols=269 Identities=18% Similarity=0.205 Sum_probs=215.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec------------------cccCCChHHHHHHhhccCCCEEEECccccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG------------------KGRLENRSQLLADIQNVKPTHVFNAAGVTGRP 446 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~------------------~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~ 446 (676)
+||||||||||||++|+++|+++|++|..+ ..|+.+.+.++.++. ++|+||||||..
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~VihlAa~~--- 76 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI--EVDQIYHLASPA--- 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCC--CCSEEEECCSCC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHc--CCCEEEECcccC---
Confidence 589999999999999999999999987443 123333333444443 469999999977
Q ss_pred CcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHH
Q 005818 447 NVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEEL 526 (676)
Q Consensus 447 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~ 526 (676)
.+..+..++...+++|+.|+.+|+++|++.++|+|++||+.||+.....|. .+....+.+|..|.+.|+.||.++|.+
T Consensus 77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~--~e~~~~~~~~~~p~~~Y~~sK~~~E~~ 154 (312)
T d2b69a1 77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPRACYDEGKRVAETM 154 (312)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSB--CTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred CchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCC--CccccCCCCCCCCccHHHHHHHHHHHH
Confidence 556667888999999999999999999999999999999999987655441 112233445778889999999999999
Q ss_pred HHHccCeEEEEeeecccCCCCChH----------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcCCCcee
Q 005818 527 LKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRNLSGIW 591 (676)
Q Consensus 527 ~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~~g~y 591 (676)
++.+.+.++++++++|++++|||+ .++.+++.+++....++ +|+|++|++++++.+++....++|
T Consensus 155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~ 234 (312)
T d2b69a1 155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPV 234 (312)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCE
T ss_pred HHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccCCce
Confidence 999888889999999999999986 46677778777554433 899999999999999998888999
Q ss_pred EccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhccC
Q 005818 592 NFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 592 n~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~ 666 (676)
|+++++.+++.++++.+++.+|.+..+...+... .......+|++|+++.++|. .+|+++|++++..+.
T Consensus 235 n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~ 305 (312)
T d2b69a1 235 NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ------DDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305 (312)
T ss_dssp EESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT------TCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred EecCCcccchhhHHHHHHHHhCCCCceEECCCCC------CCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999876654333211 11124567999998766665 489999999987654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=3.7e-37 Score=312.39 Aligned_cols=265 Identities=17% Similarity=0.206 Sum_probs=217.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|||||||||||||++|+++|+++|++| .++.+|+.+........... |
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGV--D 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTC--C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccccc--c
Confidence 689999999999999999999998643 56778888888887766655 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
.|+|+|+.. .......++...+++|+.|+.+++++|++.++ ++|+.||+.+|+.....| .+|+.+..|.
T Consensus 79 ~vi~~a~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~-------~~E~~~~~p~ 148 (322)
T d1r6da_ 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS-------WTESSPLEPN 148 (322)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC-------BCTTSCCCCC
T ss_pred eEEeecccc---cccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCC-------CCCCCCCCCC
Confidence 999999876 56667788889999999999999999999987 688889999998766555 6777788999
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISV 580 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~ 580 (676)
+.||.||.++|.+++.+.+.++++++++|++++|||+ .++.++..+++....++ +|+|++|+|++++
T Consensus 149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~ 228 (322)
T d1r6da_ 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA 228 (322)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence 9999999999999999888889999999999999986 35666777776543333 8999999999999
Q ss_pred HHHhcCCC-ceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHH
Q 005818 581 EMAKRNLS-GIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKES 657 (676)
Q Consensus 581 ~~~~~~~~-g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~ 657 (676)
.+++++.. ++||+++++.+|+.|+++.+.+.+|.+.......... ........+|++|+++.++|. .+|+++
T Consensus 229 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lg~~p~~~~eeg 303 (322)
T d1r6da_ 229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADR-----KGHDLRYSLDGGKIERELGYRPQVSFADG 303 (322)
T ss_dssp HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCC-----TTCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCC-----CCCCceeeeCHHHHHHHHCCCCCCCHHHH
Confidence 99998854 5999999999999999999999999875542211110 011113468999998765554 489999
Q ss_pred HHHhhhccC
Q 005818 658 LIKNVFEPN 666 (676)
Q Consensus 658 l~~~~~~~~ 666 (676)
|++++..+.
T Consensus 304 I~~~i~w~~ 312 (322)
T d1r6da_ 304 LARTVRWYR 312 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=4.2e-35 Score=302.17 Aligned_cols=312 Identities=20% Similarity=0.299 Sum_probs=243.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+++.|||||||||||||++|++.|+++ +++|++++|....... .+......++++++.+|++|++.+.+++....+|
T Consensus 5 ~~~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~-~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~ 81 (356)
T d1rkxa_ 5 FWQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPS-LFETARVADGMQSEIGDIRDQNKLLESIREFQPE 81 (356)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSC-HHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred hhCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHH-HHhhhhcccCCeEEEeeccChHhhhhhhhhchhh
Confidence 467899999999999999999999999 6788888886532211 0111123457999999999999999998778999
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+|+|+|+......+..++...+.+|+.|+.+++++++..+....+++.||..+|+...... ...|+.+..|.++|+.+
T Consensus 82 ~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~p~~~y~~~ 159 (356)
T d1rkxa_ 82 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIW--GYRENEAMGGYDPYSNS 159 (356)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSS--CBCTTSCBCCSSHHHHH
T ss_pred hhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccc--ccccccccCCCCccccc
Confidence 9999999887777778888999999999999999999987566677666666555544332 23566778899999999
Q ss_pred HHHHHHHHHHHHHH---------cCCCEEEEeeCCccCCCCCC-CChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHH
Q 005818 164 KAGAEMLVMAYGRS---------YGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVA 233 (676)
Q Consensus 164 K~~~E~~~~~~~~~---------~~l~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 233 (676)
|...|..+..++.. +++.++++||+.+|||++.. ..+++.+++....+.. .+++.+.+.++++|++|++
T Consensus 160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~ 238 (356)
T d1rkxa_ 160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPL 238 (356)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHH
T ss_pred cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeecccccccccccccc
Confidence 99999999887663 46789999999999998744 4677888888776664 4678889999999999999
Q ss_pred HHHHHHHhcCC-----CCce--EEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCCcccccCHHHHHh-CCCcc
Q 005818 234 EAFDTILHKGE-----VGHV--YNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQ-LGWYE 305 (676)
Q Consensus 234 ~ai~~~~~~~~-----~~~~--y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~~ 305 (676)
.++..++++.. .+.. ++...+...++.++++.+.+.++....... ....++.....+.+|++|+++ |||+|
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~d~skak~~LGw~P 317 (356)
T d1rkxa_ 239 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL-DGNAHPHEAHYLKLDCSKAKMQLGWHP 317 (356)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHHHHHCCCC
T ss_pred chhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEE-cCCCCCCCcCeeeEcHHHHHHHHCCCc
Confidence 99998887532 1222 333445678999999999999998654322 122344455666789999985 99999
Q ss_pred cCCHHHHHHHHHHHHhh
Q 005818 306 RVTWEEGLQKTMKWYIS 322 (676)
Q Consensus 306 ~~~~~~~l~~~~~~~~~ 322 (676)
+++++++|+++++||++
T Consensus 318 ~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 318 RWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.8e-36 Score=304.66 Aligned_cols=267 Identities=17% Similarity=0.164 Sum_probs=208.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|||||||||||||++|++.|+++|++| .++++|++|.+.+.++++..+||+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 689999999999999999999999755 5678999999999999998788999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
||.. .++.+..++...+++|+.||.++|++|++.++ ++|+.||+.+|+.....+ ..+++.+..|.+.|+.
T Consensus 81 Aa~~---~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~------~~e~~~~~~p~~~Y~~ 151 (338)
T d1udca_ 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIP------YVESFPTGTPQSPYGK 151 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS------BCTTSCCCCCSSHHHH
T ss_pred CCcc---chhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccc------cccccccCCCcchHHH
Confidence 9977 67777889999999999999999999999998 567778888886554333 3556666678899999
Q ss_pred hHHHHHHHHHHcc-CeEEEEeeecccCCCCChH--------------HH---HHH-HHhcCceecc-C-----------C
Q 005818 519 TKAMVEELLKEYD-NVCTLRVRMPISSDLNNPR--------------NF---ITK-ISRYNKVVNI-P-----------N 567 (676)
Q Consensus 519 sK~~~E~~~~~~~-~~~~l~~~~~r~~~~~g~~--------------~~---~~~-~~~~~~~~~~-~-----------~ 567 (676)
+|..+|+++.++. +..+++++++|++++|||+ .+ +.+ +......+.. + .
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~r 231 (338)
T d1udca_ 152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231 (338)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEE
T ss_pred HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCcee
Confidence 9999999998753 3457899999999999874 12 222 2223222211 1 2
Q ss_pred CccchhhHHHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhH
Q 005818 568 SMTILDELLPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASK 643 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k 643 (676)
+|+|++|++.++..++... ..++||+++++++|+.|+++.+.+.+|.+..+...+.. ........+|++|
T Consensus 232 d~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k 305 (338)
T d1udca_ 232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR------EGDLPAYWADASK 305 (338)
T ss_dssp CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCC------TTCCSBCCBCCHH
T ss_pred eEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCC------CCCCCEeeECHHH
Confidence 7999999999887776543 23599999999999999999999999977665333211 1111245679999
Q ss_pred HHhhCCCC--CCHHHHHHHhhhccC
Q 005818 644 LKKEFPEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 644 ~~~~~~~~--~~~~~~l~~~~~~~~ 666 (676)
+++.++|. .+|+++|++++....
T Consensus 306 ~~~~lgwkp~~~l~egi~~ti~w~~ 330 (338)
T d1udca_ 306 ADRELNWRVTRTLDEMAQDTWHWQS 330 (338)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 98865555 599999999986443
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.1e-35 Score=304.71 Aligned_cols=273 Identities=16% Similarity=0.130 Sum_probs=217.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
||||||||||||||++|+++|+++|++| .++.+|+.|.+.+.+++..+ +.|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~--~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhh--hhhhh
Confidence 6899999999999999999999999753 45679999999999999987 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCC---C--CCCCCCccccCCCCCCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKH---P--EGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~---~--~~~~~~~~~e~~~~~p~ 513 (676)
+|+.. ....+..++...+++|+.|+.+++++|.+.+.+++++||+.+|+..... + .........++++..|.
T Consensus 80 ~a~~~---~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~ 156 (346)
T d1oc2a_ 80 YAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 156 (346)
T ss_dssp CCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred hhhcc---cccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCC
Confidence 99977 5666778899999999999999999999999999999999999742110 0 01112234455677888
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCC-----CccchhhHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTILDELLPISV 580 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~ 580 (676)
+.||.+|.++|.+++.+.+..+++++++|++++|||+ .++..+..+......++ +|+|++|+|++++
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~ 236 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 236 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHH
Confidence 9999999999999999887889999999999999985 34566666666544433 8999999999999
Q ss_pred HHHhcCC-CceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCCC---CHHH
Q 005818 581 EMAKRNL-SGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPELL---SIKE 656 (676)
Q Consensus 581 ~~~~~~~-~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~~---~~~~ 656 (676)
.+++++. ++.||+++++.+++.++++.+.+.++............. .......+|++|+++.++|.| +|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~k~~~~LGw~P~~t~l~e 311 (346)
T d1oc2a_ 237 AILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRA-----GHDLRYAIDASKLRDELGWTPQFTDFSE 311 (346)
T ss_dssp HHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCT-----TCCCBCCBCCHHHHHHHCCCCSCCCHHH
T ss_pred HHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCC-----CCCceeeeCHHHHHHHHCCCCcCCCHHH
Confidence 9998874 569999999999999999999999987644332211100 001134579999987666543 6999
Q ss_pred HHHHhhhccC
Q 005818 657 SLIKNVFEPN 666 (676)
Q Consensus 657 ~l~~~~~~~~ 666 (676)
+|++++..+.
T Consensus 312 ~i~~ti~w~~ 321 (346)
T d1oc2a_ 312 GLEETIQWYT 321 (346)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.3e-35 Score=306.54 Aligned_cols=271 Identities=19% Similarity=0.228 Sum_probs=214.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGR 445 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~ 445 (676)
-|||||||||||||++|+++|+++||+| .+..+|+.+.+.+.++++++ |+|||+|+...
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~Vih~a~~~~- 91 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADMG- 91 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCCC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcC--CeEeecccccc-
Confidence 3799999999999999999999999876 45668999999999888876 99999998652
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVE 524 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 524 (676)
.......++......|+.++.+++++|++.++ ++|+.||..+|+.....+.........+..|..|.+.||.||+++|
T Consensus 92 -~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E 170 (363)
T d2c5aa1 92 -GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATE 170 (363)
T ss_dssp -CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHH
T ss_pred -cccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHH
Confidence 22333566778899999999999999999998 5777888888887655543333334456678888999999999999
Q ss_pred HHHHHccCeEEEEeeecccCCCCChHH-------------HHHHHHhcCceeccC-----CCccchhhHHHHHHHHHhcC
Q 005818 525 ELLKEYDNVCTLRVRMPISSDLNNPRN-------------FITKISRYNKVVNIP-----NSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 525 ~~~~~~~~~~~l~~~~~r~~~~~g~~~-------------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~ 586 (676)
++++.+.+.++++++++|++++|||+. +............++ .+|+|++|++++++.+++++
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~ 250 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 250 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC
Confidence 999998888899999999999999861 112222223333322 28999999999999999988
Q ss_pred CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 587 LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 587 ~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
.+++||+++++.+|+.|+++.+.+.+|.+.++...+... ......+|++|+++.++|. .+|+++|++++..
T Consensus 251 ~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~-------~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w 323 (363)
T d2c5aa1 251 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-------GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 323 (363)
T ss_dssp CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-------CCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHH
T ss_pred CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCC-------CccccccCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 889999999999999999999999999887665444221 1114457999998865555 5999999999864
Q ss_pred c
Q 005818 665 P 665 (676)
Q Consensus 665 ~ 665 (676)
+
T Consensus 324 ~ 324 (363)
T d2c5aa1 324 I 324 (363)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.9e-35 Score=294.11 Aligned_cols=266 Identities=21% Similarity=0.194 Sum_probs=225.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee---ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY---GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRT 461 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~---~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 461 (676)
|||||||||||||++|+++|.++||+|.. -..|+.|.+.+++++++.+||+|||+|+.. .+..+...+......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~---~~~~~~~~~~~~~~~ 78 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAYKI 78 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccc---ccccccccchhhccc
Confidence 78999999999999999999999999843 457899999999999999999999999977 677778888899999
Q ss_pred hhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeec
Q 005818 462 NVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 541 (676)
Q Consensus 462 Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 541 (676)
|+..+.++++.+.....++++.||+.+|+.....| ..|.++..|.+.|+.+|..+|++++.. +.+.+++
T Consensus 79 n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~-------~~e~~~~~~~~~~~~~k~~~e~~~~~~----~~~~~i~ 147 (281)
T d1vl0a_ 79 NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP-------ITEFDEVNPQSAYGKTKLEGENFVKAL----NPKYYIV 147 (281)
T ss_dssp HTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC-------BCTTSCCCCCSHHHHHHHHHHHHHHHH----CSSEEEE
T ss_pred ccccccccccccccccccccccccceeeecccccc-------ccccccccchhhhhhhhhHHHHHHHHh----CCCcccc
Confidence 99999999999999999999999999998766655 556667778899999999999999765 3567889
Q ss_pred ccCCCCChH-----HHHHHHHhcCceeccCC---CccchhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcC
Q 005818 542 ISSDLNNPR-----NFITKISRYNKVVNIPN---SMTILDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYID 613 (676)
Q Consensus 542 r~~~~~g~~-----~~~~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g 613 (676)
|++++|||. .++..+..+......++ +++|++|+++++..++++...|+||+++++.+|+.|+++.+++.+|
T Consensus 148 R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~~~~~~~~~s~~e~~~~i~~~~g 227 (281)
T d1vl0a_ 148 RTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTG 227 (281)
T ss_dssp EECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHHC
T ss_pred ceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcccCceeEeCCCccchHHHHHHHHHHhC
Confidence 999999986 34455555555444444 8999999999999999999889999999999999999999999999
Q ss_pred CCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 614 PGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
.+..+.+++..++.....+| .+..||++|+++++++. ++|+++|++++..+
T Consensus 228 ~~~~i~~i~~~~~~~~a~rp-~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l 279 (281)
T d1vl0a_ 228 IDVKVTPCTTEEFPRPAKRP-KYSVLRNYMLELTTGDITREWKESLKEYIDLL 279 (281)
T ss_dssp CCCEEEEECSTTSCCSSCCC-SBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHH
T ss_pred CCceEEeccHHHcCCcCCCc-cccccCHHHHHHHhCCCCCCHHHHHHHHHHHh
Confidence 99888888765543322222 26679999999988776 69999999998765
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.7e-35 Score=301.66 Aligned_cols=278 Identities=13% Similarity=0.110 Sum_probs=215.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-ce-------------------eeccccCCChHHHHH-HhhccCCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI-PF-------------------EYGKGRLENRSQLLA-DIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~-~v-------------------~~~~~Dl~d~~~~~~-~~~~~~~d~Vih~a~~~ 443 (676)
|||||||||||||++|+++|+++|+ +| .++.+|+++.+.+.+ +++++ |+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~--d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHC--SEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCC--Cccccccccc
Confidence 6899999999999999999999995 33 578899998766655 55554 9999999987
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHH
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMV 523 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 523 (676)
.+..+..++...+.+|+.|+.+++++|.+.+++.++.||+.+|+...........+...+..+..|.+.|+.||..+
T Consensus 79 ---~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~ 155 (342)
T d2blla1 79 ---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL 155 (342)
T ss_dssp ---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred ---cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccch
Confidence 56667788889999999999999999999999999999999998765544222222233344556778899999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChH----------------HHHHHHHhcCceeccCC-----CccchhhHHHHHHHH
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIPN-----SMTILDELLPISVEM 582 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~ 582 (676)
|++++.+.+.++++++++|++.+|||+ .++.+++.+++....++ +|+|++|+|+++..+
T Consensus 156 E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~ 235 (342)
T d2blla1 156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (342)
T ss_dssp HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred hhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeee
Confidence 999999888889999999999999874 46677888877654433 799999999999999
Q ss_pred HhcC----CCceeEccCCC-cccHHHHHHHHHhhcCCCCcccccchHhh---------hhHhccCCCccccChhHHHhhC
Q 005818 583 AKRN----LSGIWNFTNPG-VVSHNEILEMYKAYIDPGFKWTNFTLEEQ---------AKVIVAPRSNNELDASKLKKEF 648 (676)
Q Consensus 583 ~~~~----~~g~yn~~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~ld~~k~~~~~ 648 (676)
++++ .+++||+++++ .+|+.|+++.+.+.+|.......++.... .........+..+|++|+++++
T Consensus 236 ~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 315 (342)
T d2blla1 236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL 315 (342)
T ss_dssp HHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHH
T ss_pred hhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHH
Confidence 9874 23599998875 58999999999999987765544332110 0000111124567999998866
Q ss_pred CCC--CCHHHHHHHhhhccCC
Q 005818 649 PEL--LSIKESLIKNVFEPNK 667 (676)
Q Consensus 649 ~~~--~~~~~~l~~~~~~~~~ 667 (676)
+|. .+|+++|++++..+.+
T Consensus 316 gw~P~~sleegl~~ti~~y~~ 336 (342)
T d2blla1 316 DWEPKIDMQETIDETLDFFLR 336 (342)
T ss_dssp CCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHh
Confidence 665 4899999999876544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.5e-35 Score=297.28 Aligned_cols=267 Identities=15% Similarity=0.138 Sum_probs=213.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
++|||||||||||++|+++|+++||+| .++.+|++|.+.+.+.+....+++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 479999999999999999999999865 45789999999999999998889999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEE-eecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMN-YATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~-~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
+.. .......++..+++.|+.|+.+++++|++.++ ++++ .||+.+|+.....+ .+|++|..|.+.|+.
T Consensus 81 ~~~---~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-------~~E~~~~~p~~~Y~~ 150 (321)
T d1rpna_ 81 AQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER-------QDENTPFYPRSPYGV 150 (321)
T ss_dssp SCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHH
T ss_pred ccc---cccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC-------CCCCCCccccChhHH
Confidence 876 56667788889999999999999999999985 3444 45555554433333 667788899999999
Q ss_pred hHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcCc-eeccCC-----CccchhhHHHHHHH
Q 005818 519 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNK-VVNIPN-----SMTILDELLPISVE 581 (676)
Q Consensus 519 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~-~~~~~~-----~~~~v~D~a~~~~~ 581 (676)
+|.++|+++..+.+.++++++++|++++|||. .++.++..++. .+..++ +|+|++|+|++++.
T Consensus 151 sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~ 230 (321)
T d1rpna_ 151 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL 230 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHH
Confidence 99999999999887788999999999999995 23444444443 333333 79999999999999
Q ss_pred HHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCccc-ccchHhhhhHhccCC--CccccChhHHHhhCCCC--CCHHH
Q 005818 582 MAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWT-NFTLEEQAKVIVAPR--SNNELDASKLKKEFPEL--LSIKE 656 (676)
Q Consensus 582 ~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~--~~~~ld~~k~~~~~~~~--~~~~~ 656 (676)
+++++..+.||+++++.+|+.++++.+.+..|...... .+.... .+|. .....|++|++++++|. .+|++
T Consensus 231 ~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e 305 (321)
T d1rpna_ 231 MLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-----FRPAEVDVLLGNPAKAQRVLGWKPRTSLDE 305 (321)
T ss_dssp HHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-----CCSSCCCBCCBCTHHHHHHHCCCCCSCHHH
T ss_pred HHhcCCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCC-----CCCCccCCccCCHHHHHHHHCCCcCCCHHH
Confidence 99999889999999999999999999999999765432 222211 1221 14566999998865554 48999
Q ss_pred HHHHhhhccC
Q 005818 657 SLIKNVFEPN 666 (676)
Q Consensus 657 ~l~~~~~~~~ 666 (676)
+|++++.+..
T Consensus 306 ~i~~tv~~~l 315 (321)
T d1rpna_ 306 LIRMMVEADL 315 (321)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987643
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.3e-35 Score=299.75 Aligned_cols=270 Identities=15% Similarity=0.082 Sum_probs=217.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
+|+|||||||||||++|+++|+++||+| .++.+|+.|...+....... +
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~--~ 93 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV--D 93 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC--S
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc--c
Confidence 4689999999999999999999999876 34678999988888776665 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
.|+|+++.. .+..+..++...+++|+.|+.+|+++|.+.++ ++|+.||+.||+.....| .+|++|..|.
T Consensus 94 ~v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~~~p~ 163 (341)
T d1sb8a_ 94 YVLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KVEDTIGKPL 163 (341)
T ss_dssp EEEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCCC
T ss_pred ccccccccc---cccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCC-------ccCCCCCCCC
Confidence 999999977 67778888999999999999999999999998 788999999998665555 6778888999
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCC-----CccchhhHH
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTILDELL 576 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a 576 (676)
+.|+.+|.++|++++.+.+..+++++++|++++|||+ .++.+++.+++....++ +|+||+|+|
T Consensus 164 ~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~ 243 (341)
T d1sb8a_ 164 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 243 (341)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccc
Confidence 9999999999999999887889999999999999985 35567777776555443 899999999
Q ss_pred HHHHHHHhcC---CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--
Q 005818 577 PISVEMAKRN---LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-- 651 (676)
Q Consensus 577 ~~~~~~~~~~---~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-- 651 (676)
.++..++..+ .+++||+++++.+|+.|+++.+.+.++.+........ ...........+..+|++|+++.++|.
T Consensus 244 ~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~k~~~~LGw~p~ 322 (341)
T d1sb8a_ 244 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP-VYRDFREGDVRHSLADISKAAKLLGYAPK 322 (341)
T ss_dssp HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC-EEECCCTTCCSBCCBCCHHHHHHTCCCCC
T ss_pred hhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccc-cccCCCCCCcCeeeeCHHHHHHHHCCCcC
Confidence 9999998765 3469999999999999999999999875432211111 010111111224567999998876665
Q ss_pred CCHHHHHHHhhhccC
Q 005818 652 LSIKESLIKNVFEPN 666 (676)
Q Consensus 652 ~~~~~~l~~~~~~~~ 666 (676)
.+|+++|++++..+.
T Consensus 323 ~sl~~gi~~ti~wy~ 337 (341)
T d1sb8a_ 323 YDVSAGVALAMPWYI 337 (341)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 489999999986543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=3.3e-33 Score=277.85 Aligned_cols=273 Identities=22% Similarity=0.274 Sum_probs=232.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||||||||||||++|+++|.++ +++|++++|.. +|+.|.+.+++++...++|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence 67999999999999999999998 78999998852 58999999999997779999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+|+......+...+......|+..+.+++++++..+ ..++++||..+|+.....+. .|.++..|.+.|+.+|...
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~~---~e~~~~~~~~~~~~~k~~~ 133 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEPI---TEFDEVNPQSAYGKTKLEG 133 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSCB---CTTSCCCCCSHHHHHHHHH
T ss_pred eccccccccccccchhhccccccccccccccccccc--ccccccccceeeeccccccc---cccccccchhhhhhhhhHH
Confidence 999988777777778888999999999999998866 78999999999988776554 6777888999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCCCc
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGH 247 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~ 247 (676)
|.++++ ++++.+++||+++||++. ++...++..+..+..+.+.+ ++.++++|++|+++++..++++... +
T Consensus 134 e~~~~~----~~~~~~i~R~~~vyG~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~-g 203 (281)
T d1vl0a_ 134 ENFVKA----LNPKYYIVRTAWLYGDGN---NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY-G 203 (281)
T ss_dssp HHHHHH----HCSSEEEEEECSEESSSS---CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC-E
T ss_pred HHHHHH----hCCCccccceeEEeCCCc---ccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc-C
Confidence 987754 578999999999999986 67888888888888777765 4889999999999999999988764 5
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCC-----cccccCHHHHHh-CCCcccCCHHHHHHHHHHHHh
Q 005818 248 VYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND-----QRYFLDVQKLKQ-LGWYERVTWEEGLQKTMKWYI 321 (676)
Q Consensus 248 ~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~~~~ 321 (676)
+||+++++.+|+.|+++.+++.+|.+.. +...+...+.. ....+|++|+++ +||+|+ +|+++|++++++++
T Consensus 204 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~--i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 204 TFHCTCKGICSWYDFAVEIFRLTGIDVK--VTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHCCCCE--EEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred ceeEeCCCccchHHHHHHHHHHhCCCce--EEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 9999999999999999999999998754 33333222211 122479999986 899998 99999999999986
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-34 Score=296.08 Aligned_cols=269 Identities=20% Similarity=0.207 Sum_probs=215.2
Q ss_pred EE-EEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 386 KF-LIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 386 ~v-litG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
|| ||||||||||++|+++|+++||+| .++.+|++|.+.+.+++.+.+++
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 81 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccc
Confidence 68 999999999999999999999865 46778999999999999999999
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC----cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL----LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~----~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|+|+|+.. .+..+..++..++++|+.||.+++++|+++++ ++|+.||+.|||.....| ..|+.|.
T Consensus 82 ~v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~~ 151 (347)
T d1t2aa_ 82 EIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP-------QKETTPF 151 (347)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS-------BCTTSCC
T ss_pred eeeeeeecc---ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCC-------CCCCCCC
Confidence 999999977 67777788888899999999999999999874 688999999998655544 5677788
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH--------H----HHHHHHhcCceeccCC-----Cccchh
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------N----FITKISRYNKVVNIPN-----SMTILD 573 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~----~~~~~~~~~~~~~~~~-----~~~~v~ 573 (676)
.|.++||.||.++|++++.+.+.++++++++|++++|||+ . ++............++ +|+|++
T Consensus 152 ~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~ 231 (347)
T d1t2aa_ 152 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK 231 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEec
Confidence 8999999999999999999877789999999999999985 1 2222223333333332 899999
Q ss_pred hHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhh-------------hhHhccCCC--ccc
Q 005818 574 ELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQ-------------AKVIVAPRS--NNE 638 (676)
Q Consensus 574 D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------~~~~~~~~~--~~~ 638 (676)
|++++++.++++...+.|+++.....++.++.+.+....+........+.... .....+|.. ...
T Consensus 232 D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~ 311 (347)
T d1t2aa_ 232 DYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQ 311 (347)
T ss_dssp HHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred HHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEee
Confidence 99999999999988889999999999999999999999987643322111100 001111111 335
Q ss_pred cChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 639 LDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 639 ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
+|++|++++++|. .+|+++|++++.+
T Consensus 312 ~d~skak~~Lgw~P~~sl~e~i~~~I~~ 339 (347)
T d1t2aa_ 312 GDCTKAKQKLNWKPRVAFDELVREMVHA 339 (347)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred ECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 6999998876665 4999999999854
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=2.3e-34 Score=294.07 Aligned_cols=305 Identities=17% Similarity=0.125 Sum_probs=224.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCC-CCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLN-PSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
.+++|||||||||||++|++.|+++ |++|+++.|+..... .+... ..........+.+|+.|.+.+.+++ .++|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~~ 85 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--KGAA 85 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--TTCS
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--ccch
Confidence 3689999999999999999999999 688888777532111 10000 0111233456789999999998888 7899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCc-CC----------------
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDA-VV---------------- 146 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~-~~---------------- 146 (676)
+|+|+|+..... .++...+.+|+.||.+++++|++.+.+++|||+||..+++...... ..
T Consensus 86 ~v~~~a~~~~~~---~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 162 (342)
T d1y1pa1 86 GVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK 162 (342)
T ss_dssp EEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHH
T ss_pred hhhhhccccccc---ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccc
Confidence 999999987643 4566788999999999999999876699999999976544322111 00
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC--CCEEEEeeCCccCCCCCC---CChHHHHHHHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFP---EKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
...|..+..|.++|+.+|..+|++++.|+++++ ++++++||+.+|||...+ ...+..+++.+..++..... .+.
T Consensus 163 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~ 241 (342)
T d1y1pa1 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALM 241 (342)
T ss_dssp HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTC
T ss_pred cccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCc
Confidence 013445566778899999999999999988764 668889999999986532 34677788888888765543 355
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCCCC--cccccCHHHHH
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFND--QRYFLDVQKLK 299 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~k~~ 299 (676)
+.++|+|++|+|++++.+++++..++.|++++++..++.|+++.+.+.++... .... .+..+... .....+.++++
T Consensus 242 ~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~-~~~~-~~~~~~~~~~~~~~~s~~~~k 319 (342)
T d1y1pa1 242 PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT-FPAD-FPDQGQDLSKFDTAPSLEILK 319 (342)
T ss_dssp CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC-CCCC-CCCCCCCCCEECCHHHHHHHH
T ss_pred cceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCc-CCcc-CCccCcccccccchHHHHHHH
Confidence 66899999999999999999888777888999999999999999999874321 1111 11111111 11223445566
Q ss_pred hCCCcccCCHHHHHHHHHHHH
Q 005818 300 QLGWYERVTWEEGLQKTMKWY 320 (676)
Q Consensus 300 ~lg~~~~~~~~~~l~~~~~~~ 320 (676)
.|||.+.++++++|+++++++
T Consensus 320 ~lg~~~~~~lee~i~d~I~s~ 340 (342)
T d1y1pa1 320 SLGRPGWRSIEESIKDLVGSE 340 (342)
T ss_dssp HTTCCSCCCHHHHHHHHHCCS
T ss_pred HcCCCCCcCHHHHHHHHHHhC
Confidence 799999999999999998754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-33 Score=289.73 Aligned_cols=269 Identities=13% Similarity=0.130 Sum_probs=204.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.|||||||||||++|+++|+++|++| +++.+|++|.+.++++++..+||+|||+|
T Consensus 3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 82 (347)
T d1z45a2 3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA 82 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence 49999999999999999999999765 45778999999999999988899999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
|.. .+..+..++..+..+|+.|+.+++++|++.++ ++++.||+.||+.....+ .....+|+.+..|.+.|+.|
T Consensus 83 a~~---~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~---~~~~~~e~~~~~p~~~Y~~s 156 (347)
T d1z45a2 83 GLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFP---NMIPIPEECPLGPTNPYGHT 156 (347)
T ss_dssp SCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGST---TCCSBCTTSCCCCCSHHHHH
T ss_pred ccc---cccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCC---CCCccccccCCCCCChhHhH
Confidence 977 56667788889999999999999999999997 688889999997554332 11124566778888999999
Q ss_pred HHHHHHHHHHcc--CeEEEEeeecccCCCCChH-----------------HHHHHHHhc-Ccee-ccCC-----------
Q 005818 520 KAMVEELLKEYD--NVCTLRVRMPISSDLNNPR-----------------NFITKISRY-NKVV-NIPN----------- 567 (676)
Q Consensus 520 K~~~E~~~~~~~--~~~~l~~~~~r~~~~~g~~-----------------~~~~~~~~~-~~~~-~~~~----------- 567 (676)
|.++|++++.+. ...+++++++|++++||+. .++...+.+ ...+ ..++
T Consensus 157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~ 236 (347)
T d1z45a2 157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236 (347)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence 999999998873 3567889999998888753 122232222 2222 2211
Q ss_pred CccchhhHHHHHHHHHhcC--------CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCcccc
Q 005818 568 SMTILDELLPISVEMAKRN--------LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNEL 639 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~--------~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 639 (676)
+++++.|++.+++.+++.. ..++||+++++++|+.|+++.+.+.+|.+..+...+.. .....+..+
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~ 310 (347)
T d1z45a2 237 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR------AGDVLNLTA 310 (347)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCCCCB
T ss_pred eeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC------CCCCCEeeE
Confidence 5667777788887777642 23699999999999999999999999987665322211 111124567
Q ss_pred ChhHHHhhCCCC--CCHHHHHHHhhhccC
Q 005818 640 DASKLKKEFPEL--LSIKESLIKNVFEPN 666 (676)
Q Consensus 640 d~~k~~~~~~~~--~~~~~~l~~~~~~~~ 666 (676)
|++|+++.++|. .+|+++|++++..+.
T Consensus 311 d~sk~~~~lGw~p~~~lee~i~~ti~w~~ 339 (347)
T d1z45a2 311 KPDRAKRELKWQTELQVEDSCKDLWKWTT 339 (347)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 999998876765 489999999996443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=3e-33 Score=280.71 Aligned_cols=275 Identities=17% Similarity=0.232 Sum_probs=211.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------eeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhH
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPET 458 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 458 (676)
|||||||||||||++|++.|.++|+.| ..+.+|++|.+.+++++++.+||+||||||.+ .+..+..++...
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~---~~~~~~~~~~~~ 77 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPELA 77 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccc---cccccccCcccc
Confidence 689999999999999999999999866 33558999999999999999999999999987 677888899999
Q ss_pred HhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc-CeEEEE
Q 005818 459 IRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-NVCTLR 537 (676)
Q Consensus 459 ~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-~~~~l~ 537 (676)
+..|+.++.+++++|++.+++++++||+.+|+.....| .+|+.+..|.+.|+.+|..+|..+..+. +...++
T Consensus 78 ~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~-------~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~ 150 (298)
T d1n2sa_ 78 QLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-------WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFR 150 (298)
T ss_dssp HHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC-------BCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred ccccccccccchhhhhccccccccccccccccCCCCCC-------CccccccCCCchHhhhhhhhhhhHHhhhccccccc
Confidence 99999999999999999999999999999998766665 6677788888999999999999998753 444444
Q ss_pred eeecccCCCCChHHHHHHHHhcCcee-ccCC---CccchhhHHHHHHHHHhc-----CCCceeEccCCCcccHHHHHHHH
Q 005818 538 VRMPISSDLNNPRNFITKISRYNKVV-NIPN---SMTILDELLPISVEMAKR-----NLSGIWNFTNPGVVSHNEILEMY 608 (676)
Q Consensus 538 ~~~~r~~~~~g~~~~~~~~~~~~~~~-~~~~---~~~~v~D~a~~~~~~~~~-----~~~g~yn~~~~~~~s~~e~~~~i 608 (676)
......+...+....+.+.+.....+ .... +++|++|+++++..+++. ...++||+++++.++..++++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i 230 (298)
T d1n2sa_ 151 TSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALV 230 (298)
T ss_dssp ECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHH
T ss_pred ccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHH
Confidence 44444333223334444444444333 2222 889999999998887753 24589999999999999999999
Q ss_pred HhhcCC---CCcc---cccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhccCCCCC
Q 005818 609 KAYIDP---GFKW---TNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEPNKKPT 670 (676)
Q Consensus 609 ~~~~g~---~~~~---~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 670 (676)
.+..+. .... .+++...+.....+| .++.||++|+++.+++. ++|+++|++++.++....|
T Consensus 231 ~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP-~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~~~~~~~ 298 (298)
T d1n2sa_ 231 FDEARKAGITLALTELNAVPTSAYPTPASRP-GNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT 298 (298)
T ss_dssp HHHHHHHTCCCCCCEEEEECSTTSCCSSCCC-SBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCCC
T ss_pred HhhhhccCccccccceeeeehhhcCccCCCc-cccccCHHHHHHHHCCCCCcHHHHHHHHHHHHHhhcC
Confidence 886642 2222 223333332222222 26789999998866655 7999999999999887654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-33 Score=285.47 Aligned_cols=274 Identities=14% Similarity=0.103 Sum_probs=209.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec----cccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHH
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG----KGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETI 459 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~----~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 459 (676)
++||||||||||||++|+++|+++|+.+..+ ..|+.|.+.+.++++..++|.|+|+|+..+ .......++.+++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~--~~~~~~~~~~~~~ 79 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADFI 79 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhcc--ccccchhhHHHHH
Confidence 3689999999999999999999999987443 578999999999999888999999998652 2233456667888
Q ss_pred hhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEe
Q 005818 460 RTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 538 (676)
Q Consensus 460 ~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~ 538 (676)
.+|+.||.+|+++|++.++ ++||+||++||+.....|.. +....+.++..|.+.|+.||..+|++++.+.+..++++
T Consensus 80 ~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~--E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~ 157 (315)
T d1e6ua_ 80 YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA--ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDY 157 (315)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBC--GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCcc--CCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999999999999998 68899999999866554410 01111223344556799999999999999988889999
Q ss_pred eecccCCCCChHH-----------------HHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcC----------
Q 005818 539 RMPISSDLNNPRN-----------------FITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRN---------- 586 (676)
Q Consensus 539 ~~~r~~~~~g~~~-----------------~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~---------- 586 (676)
+++|++++|||+. +......+......++ +++|++|++.++..+++..
T Consensus 158 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~ 237 (315)
T d1e6ua_ 158 RSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQP 237 (315)
T ss_dssp EEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBT
T ss_pred EEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccc
Confidence 9999999999851 1222333444333332 8999999999999988653
Q ss_pred CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhcc
Q 005818 587 LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFEP 665 (676)
Q Consensus 587 ~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~~ 665 (676)
..+.+|++.+...++.++++.+.+.+|....+...+.. ........+|++|+++++|.+ .+|+++|++++..+
T Consensus 238 ~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~------~~~~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~ 311 (315)
T d1e6ua_ 238 MLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK------PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWF 311 (315)
T ss_dssp TBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS------CCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHH
T ss_pred cccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCC------CCCCceeccCHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 23589999999999999999999999987655322211 111113457999999876665 59999999998765
Q ss_pred CC
Q 005818 666 NK 667 (676)
Q Consensus 666 ~~ 667 (676)
.+
T Consensus 312 ~~ 313 (315)
T d1e6ua_ 312 LE 313 (315)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-33 Score=289.83 Aligned_cols=273 Identities=14% Similarity=0.141 Sum_probs=210.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------------------eeccccCCChHHHHHHhhccCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------------EYGKGRLENRSQLLADIQNVKP 433 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------------~~~~~Dl~d~~~~~~~~~~~~~ 433 (676)
+||||||||||||++|+++|+++|++| .++.+|++|.+.+.+++.+.++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 589999999999999999999999875 4567899999999999999888
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
++|+|+||.. .+..+..+|...+++|+.|+.+++++|++.++ ++++.||+.+|+.....+ ..++.....+
T Consensus 83 ~~i~h~Aa~~---~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~------~~~~~~~~~~ 153 (346)
T d1ek6a_ 83 MAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP------LDEAHPTGGC 153 (346)
T ss_dssp EEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS------BCTTSCCCCC
T ss_pred cccccccccc---CcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccc------cccccccccc
Confidence 9999999987 67778889999999999999999999999998 567777778886544332 2333344567
Q ss_pred CCchhhhHHHHHHHHHHccC-eEEEEeeecccCCCCChH-----------------HH-HHHHHhcCceecc--------
Q 005818 513 GSFYSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPR-----------------NF-ITKISRYNKVVNI-------- 565 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~-----------------~~-~~~~~~~~~~~~~-------- 565 (676)
.++|+.+|..+|+.+..+.+ ..+++.+++|++++|||+ .+ +..+......+..
T Consensus 154 ~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~ 233 (346)
T d1ek6a_ 154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233 (346)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCC
Confidence 78999999999999988643 358889999999999874 11 2222222222211
Q ss_pred -C---CCccchhhHHHHHHHHHhcC----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCcc
Q 005818 566 -P---NSMTILDELLPISVEMAKRN----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNN 637 (676)
Q Consensus 566 -~---~~~~~v~D~a~~~~~~~~~~----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 637 (676)
+ .+|+|++|+|.++..++... ..++||+++++.+|+.|+++.|.+.+|.+.++...+... ......
T Consensus 234 ~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~------~e~~~~ 307 (346)
T d1ek6a_ 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARRE------GDVAAC 307 (346)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCT------TCCSEE
T ss_pred CCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCC------CCCCEe
Confidence 1 27999999999988876553 235999999999999999999999999876664333211 111244
Q ss_pred ccChhHHHhhCCCC--CCHHHHHHHhhhccCC-CCCCC
Q 005818 638 ELDASKLKKEFPEL--LSIKESLIKNVFEPNK-KPTFG 672 (676)
Q Consensus 638 ~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~-~~~~~ 672 (676)
.+|++|+++.++|. .+|+|+|++++..+.+ ...||
T Consensus 308 ~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~~~~ 345 (346)
T d1ek6a_ 308 YANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345 (346)
T ss_dssp CBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred eECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHhhcC
Confidence 57999998876665 4899999999976655 34454
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1.3e-33 Score=293.38 Aligned_cols=276 Identities=11% Similarity=0.102 Sum_probs=209.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHH-cCCce-----------------------------------------eeccccCCChH
Q 005818 385 LKFLIYGRTGWIGGLLSKICEK-KGIPF-----------------------------------------EYGKGRLENRS 422 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~-~g~~v-----------------------------------------~~~~~Dl~d~~ 422 (676)
|||||||||||||++|+++|++ .||+| .++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 7999999999999999999986 56655 35678999999
Q ss_pred HHHHHhhccC-CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCC
Q 005818 423 QLLADIQNVK-PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTG 500 (676)
Q Consensus 423 ~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~ 500 (676)
.++++++..+ +|+|||+|+.. .......++...+++|+.++.+++++|++.+++ +++.||+.+|+.....+....
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~---~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 159 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred Hhhhhhhccceeehhhcccccc---cccccccccccccccccccccccchhhhccCCccccccccccccccccccccccc
Confidence 9999998764 49999999987 566667788888999999999999999999974 566677777765443332222
Q ss_pred CCccccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH-----------------HHHHHHhc----
Q 005818 501 IGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----------------FITKISRY---- 559 (676)
Q Consensus 501 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----------------~~~~~~~~---- 559 (676)
.....|+.+..|.+.|+.+|+.+|++++.+.+.++++++++|++++|||+. ++.++...
T Consensus 160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 333556667788999999999999999999888899999999999999852 22222211
Q ss_pred ------------CceeccC-----------CCccchhhHHHHHHHHHhcC----------CCceeEccCCCcccHHHHHH
Q 005818 560 ------------NKVVNIP-----------NSMTILDELLPISVEMAKRN----------LSGIWNFTNPGVVSHNEILE 606 (676)
Q Consensus 560 ------------~~~~~~~-----------~~~~~v~D~a~~~~~~~~~~----------~~g~yn~~~~~~~s~~e~~~ 606 (676)
.+....+ .+|+|++|+|++++.+++.. ..++||+++++++|+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 1111111 27999999999999988642 23599999999999999999
Q ss_pred HHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhccCCCC
Q 005818 607 MYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFEPNKKP 669 (676)
Q Consensus 607 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~~~~~~ 669 (676)
.+.+.+|.+..+...+.. .....+..+|++|+++.++|. .+++++|+++...+.+++
T Consensus 320 ~i~~~~~~~~~~~~~~~~------~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~ 378 (383)
T d1gy8a_ 320 VARKTTGHPIPVRECGRR------EGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (383)
T ss_dssp HHHHHHCCCCCEEEECCC------TTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCCceEECCCC------CCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence 999999987665433311 111124567999999876665 489999999865665554
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.4e-34 Score=296.09 Aligned_cols=274 Identities=13% Similarity=0.013 Sum_probs=200.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------------------eeccccCCChH
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------------------EYGKGRLENRS 422 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------------------~~~~~Dl~d~~ 422 (676)
+|||||||||||||++|+++|+++||+| +++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 3799999999999999999999999876 35679999999
Q ss_pred HHHHHhhccCCCEEEECccccCCCCcchhccc---hhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCC
Q 005818 423 QLLADIQNVKPTHVFNAAGVTGRPNVDWCETH---KPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEG 498 (676)
Q Consensus 423 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~---~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~ 498 (676)
.+++++++++||+|||+||.. ....+..+ +..++.+|+.||.+++++|++.++ ++++++|+.++++....+..
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~---~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~ 157 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIE 157 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBC
T ss_pred HHHHHHHhhcchheecccccc---ccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccc
Confidence 999999999999999999976 44444433 456789999999999999999886 44555555444332222211
Q ss_pred CCCCcc-------ccCCCCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH---------------------
Q 005818 499 TGIGFK-------EEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------------------- 550 (676)
Q Consensus 499 ~~~~~~-------~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------------------- 550 (676)
...... ++..+..|.+.|+.||+.+|.+++.+.+.++++++++|++++|||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 158 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred cccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccc
Confidence 110011 1224667889999999999999999888889999999999999974
Q ss_pred ----HHHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcC-CCceeEc--cCCCcccHHHHHHHHHhhcC---CC
Q 005818 551 ----NFITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRN-LSGIWNF--TNPGVVSHNEILEMYKAYID---PG 615 (676)
Q Consensus 551 ----~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~-~~g~yn~--~~~~~~s~~e~~~~i~~~~g---~~ 615 (676)
.++.+...+++....++ +|+||+|+++++..++++. ..|.|++ ++++.+|+.|+++.+.+..+ ..
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~ 317 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 317 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCC
Confidence 35566667766554443 8999999999999999876 4565554 45578999999999988753 33
Q ss_pred CcccccchHhhhhHhccCCCccccChhHHHhhCCCC-CCHHHHHHHhhhc
Q 005818 616 FKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL-LSIKESLIKNVFE 664 (676)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~-~~~~~~l~~~~~~ 664 (676)
+.....+.. .......+...|++|+++++|.+ .++++++++++..
T Consensus 318 ~~~~~~~~~----~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~ 363 (393)
T d1i24a_ 318 VKKMTVPNP----RVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNF 363 (393)
T ss_dssp CCEEEECCS----SCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHH
T ss_pred cceeeccCC----CCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHH
Confidence 333222211 01111124567999998876655 5788888887653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.1e-32 Score=281.92 Aligned_cols=267 Identities=19% Similarity=0.135 Sum_probs=205.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------------eeccccCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------------EYGKGRLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------------~~~~~Dl~d~~~~~~~~~~~~~d 434 (676)
+++||||||||||++|+++|+++||+| .++.+|+++.+.+.+.++..++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 589999999999999999999999876 24568999999999999988999
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC------CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG------LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~------~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
+|||+||.. .......+|...+..|+.++.+++++++... +++++.||+.+|+ .... ..+|+.
T Consensus 82 ~Vih~Aa~~---~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~-~~~~-------~~~E~~ 150 (339)
T d1n7ha_ 82 EVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG-STPP-------PQSETT 150 (339)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT-TSCS-------SBCTTS
T ss_pred hhhhccccc---cccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecc-cCCC-------CCCCCC
Confidence 999999976 5556678889999999999999999998653 2344445555543 2222 256777
Q ss_pred CCCCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHhcC-ceeccCC-----Cccc
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYN-KVVNIPN-----SMTI 571 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~-~~~~~~~-----~~~~ 571 (676)
|..|.+.|+.+|..+|+++..+.+.++++++++|++++|||+ ..+.+...+. ..+..++ +|+|
T Consensus 151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~ 230 (339)
T d1n7ha_ 151 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 230 (339)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence 888999999999999999999888889999999999999985 1222233333 2332322 7999
Q ss_pred hhhHHHHHHHHHhcCCCceeEccCCCcccHHHHHHHHHhhcCCCCcccc-cchHhhhhHhccCCCccccChhHHHhhCCC
Q 005818 572 LDELLPISVEMAKRNLSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTN-FTLEEQAKVIVAPRSNNELDASKLKKEFPE 650 (676)
Q Consensus 572 v~D~a~~~~~~~~~~~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~ 650 (676)
++|+|+++..+++++..+.+++..+...+..++++.+.+.+|....... +..... .........+|++|+++.++|
T Consensus 231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~d~~Kak~~LGw 307 (339)
T d1n7ha_ 231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYF---RPAEVDNLQGDASKAKEVLGW 307 (339)
T ss_dssp HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGS---CSSCCCBCCBCCHHHHHHHCC
T ss_pred eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCC---CCCCCCeeeECHHHHHHHHCC
Confidence 9999999999999988888888889999999999999999997643321 111110 111112445699999886555
Q ss_pred C--CCHHHHHHHhhhcc
Q 005818 651 L--LSIKESLIKNVFEP 665 (676)
Q Consensus 651 ~--~~~~~~l~~~~~~~ 665 (676)
. .+|+++|++++..+
T Consensus 308 ~P~~~le~gi~~ti~~~ 324 (339)
T d1n7ha_ 308 KPQVGFEKLVKMMVDED 324 (339)
T ss_dssp CCCSCHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHH
Confidence 4 49999999998643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8.6e-31 Score=263.79 Aligned_cols=294 Identities=22% Similarity=0.236 Sum_probs=199.7
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHH-HHHH---ccCCCCEE
Q 005818 10 ILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLV-HFIL---LTEKIDTI 85 (676)
Q Consensus 10 vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~-~~~~---~~~~~d~V 85 (676)
|||||||||||++|++.|+++| -++|+++|+.........+. +....|..+.+.+ .... ....+++|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g-~~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNLV--------DLNIADYMDKEDFLIQIMAGEEFGDVEAI 72 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGGGHHHH--------TSCCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EEEecCccHHHHHHHHHHHhCC-CCeEEEEECCCCcchhhccc--------ccchhhhccchHHHHHHhhhhcccchhhh
Confidence 8999999999999999999995 24677777543322111110 0111233333332 2222 12468899
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 165 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 165 (676)
+|+|+..... ..+.......++.++.+++++++..+ + +++++||..+|+....... .++.+..|.+.|+.+|.
T Consensus 73 ~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~~---~~~~~~~~~~~Y~~~K~ 145 (307)
T d1eq2a_ 73 FHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFI---ESREYEKPLNVYGYSKF 145 (307)
T ss_dssp EECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBC---SSGGGCCCSSHHHHHHH
T ss_pred hhhccccccc--cccccccccccccccccccccccccc-c-ccccccccccccccccccc---ccccccccccccccccc
Confidence 9999876543 34566778889999999999999987 5 5777777777766554332 44556678899999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCcee-ecCCCceEeeeeHHHHHHHHHHHH
Q 005818 166 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPI-HGDGSNVRSYLYCEDVAEAFDTIL 240 (676)
Q Consensus 166 ~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~ai~~~~ 240 (676)
.+|.+++.++++++++++++|++++|||+.... ..+..+.+.+..++...+ .+++.+.++|+|++|++.++..++
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~ 225 (307)
T d1eq2a_ 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (307)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred hhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence 999999999999999999999999999976432 456677777777765444 477888899999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceeeecCCCC-CCcccccCHHHHHh-CCCcccCCHHHHHHHHHH
Q 005818 241 HKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPF-NDQRYFLDVQKLKQ-LGWYERVTWEEGLQKTMK 318 (676)
Q Consensus 241 ~~~~~~~~y~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~-lg~~~~~~~~~~l~~~~~ 318 (676)
+++. .+.||+++++..|+.|+++.+.+..+......++....... .......|++|+++ +||+|+++++++|+++++
T Consensus 226 ~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~ 304 (307)
T d1eq2a_ 226 ENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA 304 (307)
T ss_dssp HHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHH
T ss_pred hhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 8765 56899999999999999999987655321111111111111 12223458899986 899999999999999999
Q ss_pred HH
Q 005818 319 WY 320 (676)
Q Consensus 319 ~~ 320 (676)
|+
T Consensus 305 w~ 306 (307)
T d1eq2a_ 305 WL 306 (307)
T ss_dssp HT
T ss_pred hC
Confidence 96
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.97 E-value=3e-31 Score=271.08 Aligned_cols=270 Identities=18% Similarity=0.212 Sum_probs=203.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
||||||||||||++|+++|+++|++| +++.+|++|.+.+.+++++++||+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 79999999999999999999999876 455799999999999999999999999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCC-CC---------CCCccccCCCC
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPE-GT---------GIGFKEEDKPN 510 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~-~~---------~~~~~~e~~~~ 510 (676)
.. .......++...+++|+.||.+|+++|.+.++ +++++||+.+++....... .. ......+..+.
T Consensus 82 ~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 82 QV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cc---cccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 87 55666778899999999999999999999986 6777777766654332110 00 01112233456
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChH-----------HHHHHHHh-----cCceeccCC-----Cc
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISR-----YNKVVNIPN-----SM 569 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~-----~~~~~~~~~-----~~ 569 (676)
.|.+.|+.+|..+|.++..+.+.++.....+|++++|++. .++.++++ +++....++ +|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 6788999999999999988766677777777777777543 34444433 233333322 89
Q ss_pred cchhhHHHHHHHHHhcC---CCceeEccC--CCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHH
Q 005818 570 TILDELLPISVEMAKRN---LSGIWNFTN--PGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKL 644 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~---~~g~yn~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~ 644 (676)
+|++|++++++.++++. .+++||+.. +..+++.|+++.+.+.++.+..+...+.. ........+|++|+
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~d~~k~ 312 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR------ESDQRVFVADIKKI 312 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC------SSCCSEECBCCHHH
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC------CCCcCeeeECHHHH
Confidence 99999999999999764 346888854 56789999999999999987665443321 11111345699999
Q ss_pred HhhCCCC--CCHHHHHHHhhhc
Q 005818 645 KKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 645 ~~~~~~~--~~~~~~l~~~~~~ 664 (676)
++.++|. .+|+++|++++..
T Consensus 313 ~~~Lg~~p~~sl~e~i~~ti~W 334 (338)
T d1orra_ 313 TNAIDWSPKVSAKDGVQKMYDW 334 (338)
T ss_dssp HHHHCCCCCSCHHHHHHHHHHH
T ss_pred HHHHCCCcCCCHHHHHHHHHHH
Confidence 8865655 4999999999864
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=8.9e-30 Score=255.11 Aligned_cols=282 Identities=20% Similarity=0.198 Sum_probs=215.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|||||||||||||++|++.|.++ ++ ++.+++... .+.+|+.|.+.+++++...++|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~-~v~~~~~~~-----------------~~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GN-LIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SE-EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CC-EEEEECCCc-----------------cccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 67999999999999999999998 44 444444321 02479999999999997778999999
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 167 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 167 (676)
+||......+..++......|+.++.+|+++|+..+ .+++++||..+|+.....+. .|+.+..|.+.|+.+|..+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~~~~---~E~~~~~p~~~y~~~k~~~ 135 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGDIPW---QETDATSPLNVYGKTKLAG 135 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTTCCB---CTTSCCCCSSHHHHHHHHH
T ss_pred ecccccccccccCccccccccccccccchhhhhccc--cccccccccccccCCCCCCC---ccccccCCCchHhhhhhhh
Confidence 999888777888898999999999999999999876 68999999999987765544 7888888999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHh----cC
Q 005818 168 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILH----KG 243 (676)
Q Consensus 168 E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~----~~ 243 (676)
|.+++.+. ....++|++..++... .+....+.+.+..+..+... +.+.++++|+.|+++++..+++ .+
T Consensus 136 e~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~ 207 (298)
T d1n2sa_ 136 EKALQDNC----PKHLIFRTSWVYAGKG--NNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKP 207 (298)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSS--CCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred hhhHHhhh----cccccccccceeeccC--Cccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccc
Confidence 99887643 3456777777665433 24555666666666655554 4577899999999999988775 34
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCC---CCCcc-eeeecCCCCC----C-cccccCHHHHHh-CCCcccCCHHHHH
Q 005818 244 EVGHVYNIGTKKERRVIDVATDICKLFSL---NPDTQ-IKFVENRPFN----D-QRYFLDVQKLKQ-LGWYERVTWEEGL 313 (676)
Q Consensus 244 ~~~~~y~i~~~~~~s~~el~~~i~~~~g~---~~~~~-~~~~~~~~~~----~-~~~~~~~~k~~~-lg~~~~~~~~~~l 313 (676)
...++||+++++.++..++++.+.+..+. ..... +...+...+. + ....+|++|+++ |||+|+ +|+++|
T Consensus 208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl 286 (298)
T d1n2sa_ 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (298)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred cccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHH
Confidence 46789999999999999999988765532 22111 1111111111 1 123579999985 999998 999999
Q ss_pred HHHHHHHhhC
Q 005818 314 QKTMKWYISN 323 (676)
Q Consensus 314 ~~~~~~~~~~ 323 (676)
+++++++...
T Consensus 287 ~~~i~~~~~~ 296 (298)
T d1n2sa_ 287 KRMLTEMFTT 296 (298)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhh
Confidence 9999988764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=3.7e-29 Score=251.68 Aligned_cols=263 Identities=13% Similarity=0.157 Sum_probs=187.5
Q ss_pred EEEEcCCcchhHHHHHHHHHcCC-ceeec-------------cccCC---ChHHHHH-Hhhc---cCCCEEEECccccCC
Q 005818 387 FLIYGRTGWIGGLLSKICEKKGI-PFEYG-------------KGRLE---NRSQLLA-DIQN---VKPTHVFNAAGVTGR 445 (676)
Q Consensus 387 vlitG~~G~iG~~l~~~L~~~g~-~v~~~-------------~~Dl~---d~~~~~~-~~~~---~~~d~Vih~a~~~~~ 445 (676)
|||||||||||++|+++|+++|+ +|..+ ..++. +.+.+.. .+.. ..+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~-- 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS-- 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC--
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc--
Confidence 89999999999999999999996 56432 11222 2333222 2221 1469999999855
Q ss_pred CCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHH
Q 005818 446 PNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEE 525 (676)
Q Consensus 446 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 525 (676)
.....+.......|+.++.+++++++..++++++.||+.++++....+ .+++.+..|.+.|+.+|..+|.
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~-------~~~~~~~~~~~~Y~~~K~~~e~ 149 (307)
T d1eq2a_ 80 ---STTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVYGYSKFLFDE 149 (307)
T ss_dssp ---CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB-------CSSGGGCCCSSHHHHHHHHHHH
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccccccchhhh
Confidence 222445567789999999999999999999999999999987655443 5555567788999999999999
Q ss_pred HHHHccCeEEEEeeecccCCCCChH------------HHHHHHHhcCceecc-C-----CCccchhhHHHHHHHHHhcCC
Q 005818 526 LLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNI-P-----NSMTILDELLPISVEMAKRNL 587 (676)
Q Consensus 526 ~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~-~-----~~~~~v~D~a~~~~~~~~~~~ 587 (676)
++..+.+..+++++++|++++|||+ .+..++..++..... + .+|+|++|++.++..+++++.
T Consensus 150 ~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~ 229 (307)
T d1eq2a_ 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229 (307)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred hccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc
Confidence 9999988889999999999999985 233445555443322 1 189999999999999999888
Q ss_pred CceeEccCCCcccHHHHHHHHHhhcCC-CCcccccchHhhhhHhccCCCccccChhHHHhhCCCC--CCHHHHHHHhhhc
Q 005818 588 SGIWNFTNPGVVSHNEILEMYKAYIDP-GFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFPEL--LSIKESLIKNVFE 664 (676)
Q Consensus 588 ~g~yn~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~~~--~~~~~~l~~~~~~ 664 (676)
.+.||+++++.+|+.|+++.+.+..+. .+...+.+... . .........|++|++++++|. .+++++|++++..
T Consensus 230 ~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~--~--~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w 305 (307)
T d1eq2a_ 230 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--K--GRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAW 305 (307)
T ss_dssp CEEEEESCSCCBCHHHHHHHC-------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccC--C--CCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHh
Confidence 899999999999999999999887653 22222222111 1 111123456999999998876 4899999999876
Q ss_pred c
Q 005818 665 P 665 (676)
Q Consensus 665 ~ 665 (676)
+
T Consensus 306 ~ 306 (307)
T d1eq2a_ 306 L 306 (307)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.96 E-value=1.3e-28 Score=253.24 Aligned_cols=267 Identities=19% Similarity=0.169 Sum_probs=199.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.|||||||||||||++|++.|+++|++| .++.+|++|++.+.++++.+.||+|+|+|
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a 87 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 87 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence 3699999999999999999999999865 46678999999999999999999999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhh
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKT 519 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 519 (676)
+.. ....+..++..++.+|+.|+.+++++|++.+. ++++++|+.+++..... ....+++.+..|.++|+.+
T Consensus 88 a~~---~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~~p~~~y~~~ 159 (356)
T d1rkxa_ 88 AQP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-----IWGYRENEAMGGYDPYSNS 159 (356)
T ss_dssp SCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-----SSCBCTTSCBCCSSHHHHH
T ss_pred ccc---cccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc-----ccccccccccCCCCccccc
Confidence 976 55666788899999999999999999999864 55555555444432211 1135666778888999999
Q ss_pred HHHHHHHHHHcc---------CeEEEEeeecccCCCCChHH---------HHHHHHhcCceeccCC----CccchhhHHH
Q 005818 520 KAMVEELLKEYD---------NVCTLRVRMPISSDLNNPRN---------FITKISRYNKVVNIPN----SMTILDELLP 577 (676)
Q Consensus 520 K~~~E~~~~~~~---------~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~~----~~~~v~D~a~ 577 (676)
|..+|..+..+. ...++.++++|++++|||.+ ++..+..+........ +++|++|++.
T Consensus 160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHH
T ss_pred cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccc
Confidence 999998887642 24578899999999999872 2333333333322211 8899999999
Q ss_pred HHHHHHhcCC------Cc--eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccChhHHHhhCC
Q 005818 578 ISVEMAKRNL------SG--IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDASKLKKEFP 649 (676)
Q Consensus 578 ~~~~~~~~~~------~g--~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~~ 649 (676)
+++.++.+.. .+ .++......+++.++++.+.+.++....+....... ........+|++|+++.++
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~skak~~LG 314 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH-----PHEAHYLKLDCSKAKMQLG 314 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHHC
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC-----CCCcCeeeEcHHHHHHHHC
Confidence 9998887641 12 344445678899999999999999876553222111 1112245689999988666
Q ss_pred CC--CCHHHHHHHhhh
Q 005818 650 EL--LSIKESLIKNVF 663 (676)
Q Consensus 650 ~~--~~~~~~l~~~~~ 663 (676)
|. .+|+++|++++.
T Consensus 315 w~P~~~l~egi~~ti~ 330 (356)
T d1rkxa_ 315 WHPRWNLNTTLEYIVG 330 (356)
T ss_dssp CCCCCCHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHH
Confidence 65 489999999985
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=1.5e-29 Score=258.01 Aligned_cols=266 Identities=12% Similarity=0.055 Sum_probs=187.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee--------------------------eccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE--------------------------YGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~--------------------------~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
+++|||||||||||++|+++|+++|++|. .+.+|+.|.+.+.+++.++ |+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~v~ 88 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA--AGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC--SEEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccc--hhhh
Confidence 46899999999999999999999999862 3568999999999999888 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-CCc-EEEeecCeeeecCCCCCCCCCCCcc-----------
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-GLL-MMNYATGCIFEYDAKHPEGTGIGFK----------- 504 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~-~v~~sS~~v~~~~~~~~~~~~~~~~----------- 504 (676)
|+|+.. . ...++...+..|+.||.+++++|.+. +++ +++.||+.+++....... ..+.
T Consensus 89 ~~a~~~---~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~---~~~~~e~~~~~~~~~ 159 (342)
T d1y1pa1 89 HIASVV---S---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVE---GIYLDEKSWNLESID 159 (342)
T ss_dssp ECCCCC---S---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCC---CCEECTTCCCHHHHH
T ss_pred hhcccc---c---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCC---Ccccccccccccccc
Confidence 999965 2 23455677899999999999999997 465 555555544433222111 1111
Q ss_pred -----ccCCCCCCCCchhhhHHHHHHHHHHccCe--EEEEeeecccCCCCChH-----------HHHHHHHhcCceecc-
Q 005818 505 -----EEDKPNFTGSFYSKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR-----------NFITKISRYNKVVNI- 565 (676)
Q Consensus 505 -----~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~~- 565 (676)
.+..+..|.++|+.||..+|++++.+.+. .+++++.+||+.+|||. .++..+..+......
T Consensus 160 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 239 (342)
T d1y1pa1 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA 239 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccC
Confidence 23345556678999999999999887432 34677778888888863 456666666543221
Q ss_pred ---CCCccchhhHHHHHHHHHhcC-CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhhhhHhccCCCccccCh
Q 005818 566 ---PNSMTILDELLPISVEMAKRN-LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQAKVIVAPRSNNELDA 641 (676)
Q Consensus 566 ---~~~~~~v~D~a~~~~~~~~~~-~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~ 641 (676)
..+|+|++|+|++++.+++++ ..|.||+++++.+|+.|++++|.+.++.......++.... .....+...+.
T Consensus 240 ~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~----~~~~~~~~~s~ 315 (342)
T d1y1pa1 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQ----DLSKFDTAPSL 315 (342)
T ss_dssp TCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCC----CCCEECCHHHH
T ss_pred CccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCc----ccccccchHHH
Confidence 227999999999999999886 5578899999999999999999998743211111221100 01111222344
Q ss_pred hHHHhhCCCC-CCHHHHHHHhhhc
Q 005818 642 SKLKKEFPEL-LSIKESLIKNVFE 664 (676)
Q Consensus 642 ~k~~~~~~~~-~~~~~~l~~~~~~ 664 (676)
.+++.+++.. .+++++|++++..
T Consensus 316 ~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 316 EILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp HHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred HHHHHcCCCCCcCHHHHHHHHHHh
Confidence 5556666654 6899999999754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5e-24 Score=199.44 Aligned_cols=201 Identities=15% Similarity=0.132 Sum_probs=156.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|.|+||+||||||+||+++++.|+++ +++|+++.|..... ......+++++.+|+.|.+++.+++ .++|+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~------~~~~~~~~~~~~gD~~d~~~l~~al--~~~d~ 70 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRL------PSEGPRPAHVVVGDVLQAADVDKTV--AGQDA 70 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGS------CSSSCCCSEEEESCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhc------ccccccccccccccccchhhHHHHh--cCCCE
Confidence 67899999999999999999999999 68888888864321 1223457999999999999999999 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+++........ ..+..++.++++++++++ ++|||++||..+|++....+ .....|...|
T Consensus 71 vi~~~g~~~~~~~~-------~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~----------~~~~~~~~~~ 132 (205)
T d1hdoa_ 71 VIVLLGTRNDLSPT-------TVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVP----------PRLQAVTDDH 132 (205)
T ss_dssp EEECCCCTTCCSCC-------CHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSC----------GGGHHHHHHH
T ss_pred EEEEeccCCchhhh-------hhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcccc----------ccccccchHH
Confidence 99999875432111 356788999999999998 99999999998886654322 1234588889
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
..+|++++ +.+++++++||+.+++.... ....+..++.....+++++|+|++++.+++++.
T Consensus 133 ~~~e~~l~----~~~~~~tiirp~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 133 IRMHKVLR----ESGLKYVAVMPPHIGDQPLT---------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp HHHHHHHH----HTCSEEEEECCSEEECCCCC---------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred HHHHHHHH----hcCCceEEEecceecCCCCc---------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 98887764 36999999999999875331 123444556666789999999999999998876
Q ss_pred -CCceEEEc
Q 005818 245 -VGHVYNIG 252 (676)
Q Consensus 245 -~~~~y~i~ 252 (676)
.++.+.++
T Consensus 194 ~~g~~~~~s 202 (205)
T d1hdoa_ 194 YDGHSTYPS 202 (205)
T ss_dssp TTTCEEEEE
T ss_pred CCCEEEecC
Confidence 56666654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=7.4e-25 Score=209.35 Aligned_cols=211 Identities=13% Similarity=0.023 Sum_probs=162.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++++|||||||||||++|++.|+++|.-++|++++|...... ......++...+|+.+.+.+..++ .++|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~------~~~~~~i~~~~~D~~~~~~~~~~~--~~~d~ 83 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD------EEAYKNVNQEVVDFEKLDDYASAF--QGHDV 83 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC------SGGGGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc------ccccceeeeeeecccccccccccc--ccccc
Confidence 6678999999999999999999999975568999998643211 122346888889999999888888 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
|||+++.... ..+...+.+.|+.++.+++++|++.+ +++|||+||..+++.+ .+.|+.+|
T Consensus 84 vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~----------------~~~Y~~~K 143 (232)
T d2bkaa1 84 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSS----------------NFLYLQVK 143 (232)
T ss_dssp EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHH
T ss_pred cccccccccc---ccchhhhhhhcccccceeeecccccC-ccccccCCccccccCc----------------cchhHHHH
Confidence 9999986532 22345678999999999999999987 9999999998776433 35699999
Q ss_pred HHHHHHHHHHHHHcCCC-EEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 165 AGAEMLVMAYGRSYGLP-VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
..+|+.+++ .+++ ++|+||+.+||++... ++...+........+ .+......++++|+|++++.++..+
T Consensus 144 ~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 144 GEVEAKVEE----LKFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAMLNNVVRP 213 (232)
T ss_dssp HHHHHHHHT----TCCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred HHhhhcccc----ccccceEEecCceeecCCCcC-cHHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHHHHHHhcC
Confidence 999987764 4665 8999999999997642 344445555443322 2223335799999999999999888
Q ss_pred CCCceEEEcC
Q 005818 244 EVGHVYNIGT 253 (676)
Q Consensus 244 ~~~~~y~i~~ 253 (676)
..++.+.+.+
T Consensus 214 ~~~~~~i~~~ 223 (232)
T d2bkaa1 214 RDKQMELLEN 223 (232)
T ss_dssp CCSSEEEEEH
T ss_pred ccCCeEEEcH
Confidence 7777777754
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.89 E-value=1.3e-24 Score=218.52 Aligned_cols=239 Identities=17% Similarity=0.089 Sum_probs=174.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
+++||||||||||||++|++.|+++ |++|++++|.......... .......+++++++|+.|.+.+.+++ .+++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~--~~~~ 77 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL--KQVD 77 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc--cCcc
Confidence 4678999999999999999999999 5778888885432211100 00112457899999999999999998 8899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 163 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 163 (676)
+++|+++..... .|..++.+++++|+..+ ..+++++||.++++... ..+..|...|...
T Consensus 78 ~~~~~~~~~~~~-----------~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~~---------~~~~~~~~~~~~~ 136 (312)
T d1qyda_ 78 VVISALAGGVLS-----------HHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDIM---------EHALQPGSITFID 136 (312)
T ss_dssp EEEECCCCSSSS-----------TTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTSC---------CCCCSSTTHHHHH
T ss_pred hhhhhhhhcccc-----------cchhhhhHHHHHHHHhc-CCcEEEEeeccccCCCc---------ccccchhhhhhHH
Confidence 999998765432 24455778888888877 67788888866544332 2334455667777
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC
Q 005818 164 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 164 K~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~ 243 (676)
|..++. +....+++++++|++.+||+..... ...+......+..+.+++++++.++|+|++|+|++++.+++++
T Consensus 137 ~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~ 210 (312)
T d1qyda_ 137 KRKVRR----AIEAASIPYTYVSSNMFAGYFAGSL--AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210 (312)
T ss_dssp HHHHHH----HHHHTTCCBCEEECCEEHHHHTTTS--SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHH----hhcccccceEEeccceeecCCccch--hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence 666665 4455689999999999999754211 1111111224556777899999999999999999999999876
Q ss_pred C-CCc-eEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005818 244 E-VGH-VYNIGTKKERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 244 ~-~~~-~y~i~~~~~~s~~el~~~i~~~~g~~~~ 275 (676)
. .++ .|++++++.+|+.|+++.+.+.+|.+.+
T Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
T d1qyda_ 211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 244 (312)
T ss_dssp GGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred cccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCe
Confidence 5 344 4667777889999999999999997653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.88 E-value=3.9e-23 Score=206.99 Aligned_cols=233 Identities=15% Similarity=0.121 Sum_probs=169.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC---CCCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL---NPSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++|||||||||||||++|++.|+++ +++|++++|.......... .......+++++.+|+.+...+.+.+ .++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~ 77 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV--KNV 77 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh--hhc
Confidence 4689999999999999999999999 6788888886532211000 00112346899999999999999888 789
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 162 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 162 (676)
+.|+|+++... +.++.+++++++..+ ++++++.||...+..... ...+...+..
T Consensus 78 ~~vi~~~~~~~---------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~----------~~~~~~~~~~ 131 (307)
T d1qyca_ 78 DVVISTVGSLQ---------------IESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVH----------AVEPAKSVFE 131 (307)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCC----------CCTTHHHHHH
T ss_pred eeeeecccccc---------------cchhhHHHHHHHHhc-cccceeeecccccccccc----------cccccccccc
Confidence 99999987543 234567888888877 788888888544322221 1122233444
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhc
Q 005818 163 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHK 242 (676)
Q Consensus 163 sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~ 242 (676)
.+...+. +..+.+++++++|++.+||+.... +..+......+....+++++.+.++|+|++|+|++++.++++
T Consensus 132 ~~~~~~~----~~~~~~~~~~i~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 204 (307)
T d1qyca_ 132 VKAKVRR----AIEAEGIPYTYVSSNCFAGYFLRS---LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 204 (307)
T ss_dssp HHHHHHH----HHHHHTCCBEEEECCEEHHHHTTT---TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred ccccccc----hhhccCCCceecccceecCCCccc---hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence 4444444 445569999999999999986521 122233344556677888999999999999999999999987
Q ss_pred CC-CCc-eEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005818 243 GE-VGH-VYNIGTKKERRVIDVATDICKLFSLNPD 275 (676)
Q Consensus 243 ~~-~~~-~y~i~~~~~~s~~el~~~i~~~~g~~~~ 275 (676)
+. .++ .|++++++.+|+.|+++.+.+.+|.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 205 PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred hhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence 54 344 5677788999999999999999998643
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88 E-value=3.4e-23 Score=200.80 Aligned_cols=229 Identities=18% Similarity=0.183 Sum_probs=163.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
.|++|||||||||||+++++.|+++|+.+.|+.+.|...... ....+++++.+|+.+.+.+.+++ .++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~--~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAF--QGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeecccccccccc--ccceee
Confidence 368999999999999999999999988889998888653211 12347899999999999999999 789999
Q ss_pred EEccccCCcC-------------CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 86 MHFAAQTHVD-------------NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 86 ih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
||+|+..... ............|+.++.+++..+.... ...+.+.|+...+.......
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~-------- 143 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLN-------- 143 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGG--------
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccc--------
Confidence 9999875421 1222344667889999999999998877 78899999866654332111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
..+...|...+...+. +....+++++++||+.+||+.......+ .+..... .....+++|++|+
T Consensus 144 -~~~~~~~~~~~~~~~~----~~~~~~~~~~ilRp~~v~g~~~~~~~~~--------~~~~~~~---~~~~~~~i~~~Dv 207 (252)
T d2q46a1 144 -KLGNGNILVWKRKAEQ----YLADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDEL---LQTDTKTVPRADV 207 (252)
T ss_dssp -GGGGCCHHHHHHHHHH----HHHHSSSCEEEEEECEEECSCTTSSCEE--------EESTTGG---GGSSCCEEEHHHH
T ss_pred -cccccchhhhhhhhhh----hhhcccccceeecceEEECCCcchhhhh--------hccCccc---ccCCCCeEEHHHH
Confidence 1123346555555443 4456799999999999999976322221 0111111 1233479999999
Q ss_pred HHHHHHHHhcCC-CCceEEEcCCC---cccHHHHHHHHHH
Q 005818 233 AEAFDTILHKGE-VGHVYNIGTKK---ERRVIDVATDICK 268 (676)
Q Consensus 233 a~ai~~~~~~~~-~~~~y~i~~~~---~~s~~el~~~i~~ 268 (676)
|++++.+++++. .+++|||+++. ..++.++.+.+.+
T Consensus 208 a~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~ 247 (252)
T d2q46a1 208 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQ 247 (252)
T ss_dssp HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTT
T ss_pred HHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHH
Confidence 999999998766 56799998643 3556666655543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=2.9e-22 Score=188.72 Aligned_cols=199 Identities=18% Similarity=0.217 Sum_probs=141.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+|+|||||||||||++|++.|+++++-.+|+++.|.... ..+. +..+..|...+...+ ...+|+||
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~~~~-~~~~d~vi 67 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELLPQL-DGSIDTAF 67 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHGGGC-CSCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhhhcc-ccchheee
Confidence 589999999999999999999999766688888875421 1222 344455555444333 24689999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 166 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 166 (676)
|+++.... ...+...+.+.|+.++.+++++|++.+ +++|+++||.++++.. .+.|+.+|..
T Consensus 68 ~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~~----------------~~~y~~~K~~ 128 (212)
T d2a35a1 68 CCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKS----------------SIFYNRVKGE 128 (212)
T ss_dssp ECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHHHH
T ss_pred eeeeeecc--ccccccccccchhhhhhhccccccccc-cccccccccccccccc----------------ccchhHHHHH
Confidence 99986532 223456788999999999999999977 9999999998776433 3569999999
Q ss_pred HHHHHHHHHHHcCCC-EEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcCCC
Q 005818 167 AEMLVMAYGRSYGLP-VITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEV 245 (676)
Q Consensus 167 ~E~~~~~~~~~~~l~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~ 245 (676)
+|+.+++ .+++ ++|+||+.|||+..... +. .+ + ...+..... ..++++|++|+|++++.+++++..
T Consensus 129 ~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~-~~-~~---~--~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 129 LEQALQE----QGWPQLTIARPSLLFGPREEFR-LA-EI---L--AAPIARILP--GKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp HHHHHTT----SCCSEEEEEECCSEESTTSCEE-GG-GG---T--TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred Hhhhccc----cccccceeeCCcceeCCccccc-HH-HH---H--HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCCC
Confidence 9987753 4665 99999999999976321 11 10 0 111111111 234579999999999999988765
Q ss_pred CceEEEc
Q 005818 246 GHVYNIG 252 (676)
Q Consensus 246 ~~~y~i~ 252 (676)
+ .+++.
T Consensus 196 g-~~~~~ 201 (212)
T d2a35a1 196 G-VRFVE 201 (212)
T ss_dssp E-EEEEE
T ss_pred C-CEEEE
Confidence 4 44443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.6e-22 Score=188.22 Aligned_cols=181 Identities=15% Similarity=0.073 Sum_probs=134.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCC--ce------------------eeccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGI--PF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~--~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
+|+|+|||||||||++|+++|+++|+ +| ....+|+.+.+.+.++++++ |+|||+++..
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~--d~vi~~~~~~ 91 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGH--DVGFCCLGTT 91 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSC--SEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccc--cccccccccc
Confidence 36899999999999999999999994 33 44557888888888888887 9999999854
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHH
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAM 522 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 522 (676)
....+...+.++|+.++.+++++|.+.+++ ++++||..++. .+.+.|+.+|..
T Consensus 92 ------~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~--------------------~~~~~Y~~~K~~ 145 (232)
T d2bkaa1 92 ------RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------------SSNFLYLQVKGE 145 (232)
T ss_dssp ------HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHH
T ss_pred ------ccccchhhhhhhcccccceeeecccccCccccccCCcccccc--------------------CccchhHHHHHH
Confidence 123445677899999999999999999986 55666654431 223679999999
Q ss_pred HHHHHHHccCeEEEEeeecccCCCCChHH-------HHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCC-CceeEcc
Q 005818 523 VEELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTILDELLPISVEMAKRNL-SGIWNFT 594 (676)
Q Consensus 523 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~-~g~yn~~ 594 (676)
+|+.+..+.- -+++++||+.+||++. ++..+....+.......+++++|+|++++.++.++. .+.+.+.
T Consensus 146 ~E~~l~~~~~---~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~ 222 (232)
T d2bkaa1 146 VEAKVEELKF---DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLE 222 (232)
T ss_dssp HHHHHHTTCC---SEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEE
T ss_pred hhhccccccc---cceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEc
Confidence 9999987532 1478999999999852 122222222211222367999999999999887774 4567665
Q ss_pred C
Q 005818 595 N 595 (676)
Q Consensus 595 ~ 595 (676)
+
T Consensus 223 ~ 223 (232)
T d2bkaa1 223 N 223 (232)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.84 E-value=2.9e-21 Score=193.85 Aligned_cols=209 Identities=13% Similarity=0.171 Sum_probs=156.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhccCCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++||||||||||||++|+++|+++||+| .++.+|+.|.+.+.+++.++ +.+|
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~--~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCc--chhh
Confidence 4689999999999999999999999865 56678999999999999988 9999
Q ss_pred ECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 438 NAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 438 h~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
|+++.. ....|..++.+++++|++.+ .+++++||..++. ..+..+..|...|
T Consensus 81 ~~~~~~--------------~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~-------------~~~~~~~~~~~~~ 133 (312)
T d1qyda_ 81 SALAGG--------------VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP-------------DIMEHALQPGSIT 133 (312)
T ss_dssp ECCCCS--------------SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCT-------------TSCCCCCSSTTHH
T ss_pred hhhhhc--------------ccccchhhhhHHHHHHHHhcCCcEEEEeeccccC-------------CCcccccchhhhh
Confidence 998743 12456778889999998886 5777777654432 1222344556778
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH-----HHHH-HHhcCceeccCC-----CccchhhHHHHHHHHHhc
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----FITK-ISRYNKVVNIPN-----SMTILDELLPISVEMAKR 585 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----~~~~-~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~ 585 (676)
..+|..++..... .+++++++|++.+||+.. +... ....+.....++ +|+|++|+|++++.++.+
T Consensus 134 ~~~~~~~~~~~~~----~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~ 209 (312)
T d1qyda_ 134 FIDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 209 (312)
T ss_dssp HHHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHhhcc----cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcC
Confidence 8888888877654 357789999999988641 1111 111222222222 899999999999999987
Q ss_pred CC--Cc-eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHh
Q 005818 586 NL--SG-IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEE 625 (676)
Q Consensus 586 ~~--~g-~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 625 (676)
+. ++ .|++++++.+|+.|+++.+.+.+|.+.++..++...
T Consensus 210 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~ 252 (312)
T d1qyda_ 210 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 252 (312)
T ss_dssp GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred ccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHH
Confidence 63 34 567777789999999999999999998887777543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.84 E-value=1.5e-21 Score=195.34 Aligned_cols=206 Identities=15% Similarity=0.182 Sum_probs=153.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhccCCCEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNVKPTHV 436 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~~~d~V 436 (676)
+|||||||||||||++|+++|+++|++| .++.+|+.+...+.+.++++ +.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhc--eee
Confidence 4789999999999999999999999865 55678999999999999887 999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCch
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFY 516 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 516 (676)
||+++.. ++.++.++++++...+++.++++|+..+.. ++.....+...|
T Consensus 81 i~~~~~~------------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------------~~~~~~~~~~~~ 129 (307)
T d1qyca_ 81 ISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------------DNVHAVEPAKSV 129 (307)
T ss_dssp EECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------------TSCCCCTTHHHH
T ss_pred eeccccc------------------ccchhhHHHHHHHHhccccceeeecccccc-------------cccccccccccc
Confidence 9998732 345677888999999887666666644421 112222333557
Q ss_pred hhhHHHHHHHHHHccCeEEEEeeecccCCCCChHH-----HHHHHHhcCceeccCC-----CccchhhHHHHHHHHHhcC
Q 005818 517 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----FITKISRYNKVVNIPN-----SMTILDELLPISVEMAKRN 586 (676)
Q Consensus 517 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~ 586 (676)
...+...|..+.. .+++++++|++++||+.. +......+......+. +|+|++|+|++++.+++++
T Consensus 130 ~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 205 (307)
T d1qyca_ 130 FEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 205 (307)
T ss_dssp HHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred ccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence 7777777777754 457888999999998751 1122222222222222 8999999999999999876
Q ss_pred C--Cc-eeEccCCCcccHHHHHHHHHhhcCCCCcccccchHhh
Q 005818 587 L--SG-IWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTLEEQ 626 (676)
Q Consensus 587 ~--~g-~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 626 (676)
. ++ .||+++++.+|+.|+++.+.+++|.+.++..++.++.
T Consensus 206 ~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~ 248 (307)
T d1qyca_ 206 RTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEV 248 (307)
T ss_dssp GGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHH
T ss_pred hhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHH
Confidence 3 34 6778888999999999999999999888777776543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8e-21 Score=177.38 Aligned_cols=176 Identities=12% Similarity=0.095 Sum_probs=131.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
.|+||+||||||+||++++++|+++||+| +++.+|+.|.+++.++++++ |+|||++|..
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~--d~vi~~~g~~- 78 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTR- 78 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCC--CEEEEEeccC-
Confidence 46799999999999999999999999865 78889999999999999998 9999999854
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHH
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMV 523 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 523 (676)
. +.....++..++.++++++++.+++ +|++||..+++.....+ .....|...|..+
T Consensus 79 --~-------~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~--------------~~~~~~~~~~~~~ 135 (205)
T d1hdoa_ 79 --N-------DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP--------------PRLQAVTDDHIRM 135 (205)
T ss_dssp --T-------CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC--------------GGGHHHHHHHHHH
T ss_pred --C-------chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc--------------ccccccchHHHHH
Confidence 1 1122356788999999999999985 56666666654322111 2235688999999
Q ss_pred HHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCcee----ccCCCccchhhHHHHHHHHHhcCC--CceeEcc
Q 005818 524 EELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV----NIPNSMTILDELLPISVEMAKRNL--SGIWNFT 594 (676)
Q Consensus 524 E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~~--~g~yn~~ 594 (676)
|+++++ .+++++++||+.+++... .+.... .....+++++|+|++++.+++++. +..+.++
T Consensus 136 e~~l~~----~~~~~tiirp~~~~~~~~------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 136 HKVLRE----SGLKYVAVMPPHIGDQPL------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp HHHHHH----TCSEEEEECCSEEECCCC------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred HHHHHh----cCCceEEEecceecCCCC------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 999865 468899999988764210 111111 122378999999999999998874 2355544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=1.3e-20 Score=177.20 Aligned_cols=181 Identities=17% Similarity=0.106 Sum_probs=125.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc--eee-----------ccccCCChHHHHHHhhccCCCEEEECccccCCCCcchh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP--FEY-----------GKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWC 451 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~--v~~-----------~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 451 (676)
+||+|||||||||++|+++|+++|+. |.. +..+..|..++.+.+.. .+|.||||+|.. ...
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~vi~~~g~~-----~~~ 76 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG-SIDTAFCCLGTT-----IKE 76 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCS-CCSEEEECCCCC-----HHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhcccc-chheeeeeeeee-----ccc
Confidence 58999999999999999999999984 311 12233344444333333 469999999854 222
Q ss_pred ccchhhHHhhhhhhHHHHHHHHHHcCCc-EEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHc
Q 005818 452 ETHKPETIRTNVVGTLTLADVCRENGLL-MMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEY 530 (676)
Q Consensus 452 ~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~ 530 (676)
..+...+...|+.++.+++++|++.+++ ++++||..++. .+.+.|+.+|..+|+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~--------------------~~~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHHHHTTS
T ss_pred cccccccccchhhhhhhccccccccccccccccccccccc--------------------ccccchhHHHHHHhhhcccc
Confidence 3445678899999999999999999985 56666655441 23377999999999998764
Q ss_pred cCeEEEEeeecccCCCCChHHHH--HHHHhcCceecc-CC--CccchhhHHHHHHHHHhcCCCceeEccC
Q 005818 531 DNVCTLRVRMPISSDLNNPRNFI--TKISRYNKVVNI-PN--SMTILDELLPISVEMAKRNLSGIWNFTN 595 (676)
Q Consensus 531 ~~~~~l~~~~~r~~~~~g~~~~~--~~~~~~~~~~~~-~~--~~~~v~D~a~~~~~~~~~~~~g~yn~~~ 595 (676)
.- -+++++||+.+||+.... .... ....... .. .++|++|+|++++.+++++..|.+++.+
T Consensus 137 ~~---~~~~I~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~~~~ 202 (212)
T d2a35a1 137 GW---PQLTIARPSLLFGPREEFRLAEIL-AAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVES 202 (212)
T ss_dssp CC---SEEEEEECCSEESTTSCEEGGGGT-TCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEEH
T ss_pred cc---ccceeeCCcceeCCcccccHHHHH-HHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCCEEEEH
Confidence 31 157899999999985211 0011 1111111 11 5699999999999999988888766543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=9.9e-21 Score=183.10 Aligned_cols=211 Identities=8% Similarity=0.072 Sum_probs=145.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhccCCCEEEECccccC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
|++|||||||||||++|++.|+++|++| .++.+|+.+.+.+.++++++ |+|||+|+...
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~vi~~a~~~~ 80 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAVP 80 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccc--eeeEEEEeecc
Confidence 5689999999999999999999999753 56678999999999999988 99999998642
Q ss_pred CCC----------cchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC-eeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 445 RPN----------VDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATG-CIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 445 ~~~----------~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~-~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
.+. ......+......+|+.++.++++.+.....+...+.|+ ..+... ......+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-------------~~~~~~~~ 147 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD-------------HPLNKLGN 147 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT-------------CGGGGGGG
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCC-------------cccccccc
Confidence 100 011123345667899999999999999888755544433 222100 00011122
Q ss_pred CchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcC--ceeccCCCccchhhHHHHHHHHHhcCC--Cc
Q 005818 514 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYN--KVVNIPNSMTILDELLPISVEMAKRNL--SG 589 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~v~D~a~~~~~~~~~~~--~g 589 (676)
..|...+...+.+.. ..+++++++||+++|||......+..+. .......+++|++|+|++++.+++++. ++
T Consensus 148 ~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~ 223 (252)
T d2q46a1 148 GNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNK 223 (252)
T ss_dssp CCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTE
T ss_pred cchhhhhhhhhhhhh----cccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCc
Confidence 446666665555543 3468899999999999863222111111 122333489999999999999998873 35
Q ss_pred eeEccCCC---cccHHHHHHHHHhhcC
Q 005818 590 IWNFTNPG---VVSHNEILEMYKAYID 613 (676)
Q Consensus 590 ~yn~~~~~---~~s~~e~~~~i~~~~g 613 (676)
+||++++. ..++.++.+++.++.+
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 224 AFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 99998743 4678888888776654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.80 E-value=1.6e-19 Score=183.91 Aligned_cols=231 Identities=16% Similarity=0.087 Sum_probs=160.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHH-HHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADL-VHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~-~~~~~~~~~~d~ 84 (676)
++|+|||||||||||++|++.|+++ +++|+++.|.........+ ...++++++++|+.|..+ +..++ .++++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~---~~~~~v~~~~gD~~d~~~~~~~a~--~~~~~ 74 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEEL---QAIPNVTLFQGPLLNNVPLMDTLF--EGAHL 74 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHH---HTSTTEEEEESCCTTCHHHHHHHH--TTCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhh---cccCCCEEEEeeCCCcHHHHHHHh--cCCce
Confidence 5789999999999999999999999 5667777775433221111 224589999999998654 66677 78888
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 164 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 164 (676)
+++...... ..++..+.+++++|+..+ +++++++||........ ..+..+|..+|
T Consensus 75 ~~~~~~~~~------------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~------------~~~~~~~~~~k 129 (350)
T d1xgka_ 75 AFINTTSQA------------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYG------------PWPAVPMWAPK 129 (350)
T ss_dssp EEECCCSTT------------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTS------------SCCCCTTTHHH
T ss_pred EEeeccccc------------chhhhhhhHHHHHHHHhC-CCceEEEeeccccccCC------------cccchhhhhhH
Confidence 887654321 135667889999999988 78888888865433222 22345688888
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCC-CceeecCCCceEeeeeH-HHHHHHHHHHHhc
Q 005818 165 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGK-PLPIHGDGSNVRSYLYC-EDVAEAFDTILHK 242 (676)
Q Consensus 165 ~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v-~D~a~ai~~~~~~ 242 (676)
...|.+.. +.+++++++|++..++......... ........+. ....+.+++..+.++++ +|+++++..+++.
T Consensus 130 ~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~ 204 (350)
T d1xgka_ 130 FTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPL-FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD 204 (350)
T ss_dssp HHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSS-CBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----hhccCceeeeeceeecccccccccc-ccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhC
Confidence 88877554 4589999999998877532111100 0000011111 12344567777888875 8999999999865
Q ss_pred CC---CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005818 243 GE---VGHVYNIGTKKERRVIDVATDICKLFSLNP 274 (676)
Q Consensus 243 ~~---~~~~y~i~~~~~~s~~el~~~i~~~~g~~~ 274 (676)
+. .++.|++++ +.+|+.|+++.+.+.+|++.
T Consensus 205 ~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 205 GPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp CHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred ChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcc
Confidence 32 577899986 67999999999999999864
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=6.4e-18 Score=160.93 Aligned_cols=225 Identities=16% Similarity=0.131 Sum_probs=163.3
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
|.-.+++|+||||||++.||+++++.|+++ |++|++.+|+... .+.+. ....++..+.+|++|++++++++++.
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~--l~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~ 74 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQAD--LDSLV--RECPGIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHH--HHSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHH--HHHHH--HhcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 555678899999999999999999999999 7899999986422 11111 11246788999999999999998654
Q ss_pred -CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 -KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
++|++||+|+.... +.+.+++...+++|+.++..+.+++.. .+.-.++|++||...+.....
T Consensus 75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------- 145 (244)
T d1pr9a_ 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------- 145 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------
T ss_pred CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc---------
Confidence 79999999998653 335567788999999999988876542 222468999999766543332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|..+.......-....+.....-++. .+..
T Consensus 146 -----~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~ 211 (244)
T d1pr9a_ 146 -----HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG---------KFAE 211 (244)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC---------SCBC
T ss_pred -----hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC---------CCcC
Confidence 2359999999999999887763 8999999999997653211100112233333332211 3667
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
.+|+|+++++++... -.|+.+.+.+|
T Consensus 212 peevA~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence 899999999988542 26788888776
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.75 E-value=1.2e-17 Score=157.93 Aligned_cols=212 Identities=14% Similarity=0.117 Sum_probs=154.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+.+.|+||||||++.||+++++.|+++ |++|++.+|... ....+..+++|++|+++++++++.
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSG-----------APKGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSC-----------CCTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc-----------hhcCceEEEEecCCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999 789999988642 133567899999999998877632
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.+...
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~-------- 141 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGN-------- 141 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----C--------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcc--------
Confidence 379999999998653 34556778899999999988876543 333 469999999765533222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+..+... .+.....+......+ + ..+.
T Consensus 142 ------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~p--l-------~R~~ 204 (237)
T d1uzma1 142 ------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR--ALDERIQQGALQFIP--A-------KRVG 204 (237)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HSCHHHHHHHGGGCT--T-------CSCB
T ss_pred ------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh--ccCHHHHHHHHhcCC--C-------CCCc
Confidence 346999999999999887776 4899999999999754321 111122222222221 1 1356
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
..+|+|.++++++... -.|+++.+.+|
T Consensus 205 ~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 205 TPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 7899999999988543 26788888776
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.74 E-value=8.7e-18 Score=160.75 Aligned_cols=220 Identities=14% Similarity=0.123 Sum_probs=159.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|.+|||||++.||+++++.|+++ |++|++.+|+..... .+.+ .....++..+++|++|++++.++++.
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l--~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 83 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEI--KSFGYESSGYAGDVSKKEEISEVINKILT 83 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHH--HTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 788999998642211 0111 12345789999999999998877743
Q ss_pred --CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+|+..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-+...
T Consensus 84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~------- 155 (251)
T d2c07a1 84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVG------- 155 (251)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT-------
T ss_pred hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCC-------
Confidence 3899999999886532 3445677899999999999887654 233 469999999765433222
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... .......+......++. .+
T Consensus 156 -------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~--~~~~~~~~~~~~~~pl~---------R~ 217 (251)
T d2c07a1 156 -------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD--KISEQIKKNIISNIPAG---------RM 217 (251)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCTTS---------SC
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc--ccCHHHHHHHHhcCCCC---------CC
Confidence 345999999999999988776 4899999999999876542 23344445554443321 26
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 227 LYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
...+|+|.+++.++.... .|+.+.+.+|
T Consensus 218 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 218 GTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 678999999999885432 6788888776
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=2.7e-17 Score=156.24 Aligned_cols=219 Identities=19% Similarity=0.136 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|.... .+.. ....+++.+.+|++|+++++++++.
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGP--LREA---AEAVGAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHH---HHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHH---HHHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 46799999999999999999999999 7889999986421 1111 1122578899999999999887643
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-..++++||....+...
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~----------- 144 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG----------- 144 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT-----------
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCC-----------
Confidence 379999999998653 3455677889999999999999876532 1245677777754332221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+... .......+......++. .+...
T Consensus 145 ----~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~pl~---------R~~~p 209 (242)
T d1ulsa_ 145 ----QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA--KVPEKVREKAIAATPLG---------RAGKP 209 (242)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--SSCHHHHHHHHHTCTTC---------SCBCH
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh--cCCHHHHHHHHhcCCCC---------CCCCH
Confidence 3469999999999998877764 799999999999876542 22233334443333221 25567
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 230 EDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 230 ~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+|+|.++++++... -.|+.+.+.+|..
T Consensus 210 edia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 99999999988532 2678898887753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.74 E-value=2.3e-17 Score=157.29 Aligned_cols=224 Identities=15% Similarity=0.094 Sum_probs=154.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.++.|++|||||++.||+++++.|+++ |++|++.+|......... ......++..+++|++|+++++++++.
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~--~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAA--IRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHH--HHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999 788999888653211111 112345789999999999998877632
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||.....+...
T Consensus 78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~-------- 148 (247)
T d2ew8a1 78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEA-------- 148 (247)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSS--------
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcc--------
Confidence 379999999998653 34556788999999999999888664 233 468999999765433322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..... ......+...... .++ ..+.
T Consensus 149 ------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~-~~l-------~r~~ 213 (247)
T d2ew8a1 149 ------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS-ALSAMFDVLPNML-QAI-------PRLQ 213 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT-SSS-------CSCC
T ss_pred ------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc-ccchhHHHHHHHh-ccC-------CCCC
Confidence 346999999999999888775 489999999999976643211 1111111111110 111 1255
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+|+|.++++++... -.|+++.+.+|-
T Consensus 214 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 214 VPLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 6799999999988542 267888888763
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.73 E-value=1.1e-17 Score=158.80 Aligned_cols=222 Identities=18% Similarity=0.121 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccC-CCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTE-KID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~-~~d 83 (676)
.++|++|||||++.||+++++.|+++ |++|++.+|.... .+.+. ....++..+.+|++|++++++++++. ++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~--l~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSD--LVSLA--KECPGIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHH--HHSTTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH--HhcCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 46799999999999999999999999 7899999886421 11111 11246889999999999999999665 699
Q ss_pred EEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
++||+||.... +.+.+++...+++|+.++..+.+++.. .+.-.++|++||...+.....
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------- 143 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------- 143 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------------
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-------------
Confidence 99999998653 335566778999999999999876532 222358999999765543332
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+.......-+...+......++. .+...+|+
T Consensus 144 -~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peev 213 (242)
T d1cyda_ 144 -LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR---------KFAEVEDV 213 (242)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS---------SCBCHHHH
T ss_pred -cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC---------CCcCHHHH
Confidence 2459999999999999887764 7999999999987552100000012222222222211 35678999
Q ss_pred HHHHHHHHhcC---CCCceEEEcCCC
Q 005818 233 AEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 233 a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
+.++++++... -.|+++.+.+|-
T Consensus 214 a~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 214 VNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHHHHHHhCchhcCcCCceEEeCcch
Confidence 99999988542 267889888764
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.72 E-value=1.9e-17 Score=159.08 Aligned_cols=230 Identities=15% Similarity=0.095 Sum_probs=161.2
Q ss_pred CCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 1 MATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 1 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
|..-++.|++|||||++.||+++++.|+++ +++|++.+|...... +.+. ......++..+++|++|+++++++++
T Consensus 1 M~~dL~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~-~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~ 77 (261)
T d1geea_ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEA-NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 443467899999999999999999999999 789999888642111 1000 01124468899999999999887764
Q ss_pred c-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcC
Q 005818 79 T-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAV 145 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 145 (676)
. .++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+.-..+|++||...+-+...
T Consensus 78 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~--- 154 (261)
T d1geea_ 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--- 154 (261)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---
T ss_pred HHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc---
Confidence 3 379999999998653 34556778899999999998887653 2232346889999765433222
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|..+.......-+..........++.
T Consensus 155 -----------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------- 216 (261)
T d1geea_ 155 -----------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG------- 216 (261)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS-------
T ss_pred -----------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC-------
Confidence 3459999999999998877764 8999999999997654310000012222233322211
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+...+|+|+++++++... -.|+.+.+.+|..
T Consensus 217 --R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 217 --YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence 2567799999999988542 2688999988754
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=9.4e-18 Score=159.52 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=159.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.+.|++|||||++.||+++++.|+++ |++|++.+|.... .+.+. .....+...+.+|++|+++++++++.
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~--l~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENG--AQAIS-DYLGANGKGLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHH-HHHGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHH-HHhCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence 36799999999999999999999999 7889999886422 11111 11134678899999999998777632
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-+...
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~--------- 146 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGG--------- 146 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT---------
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCC---------
Confidence 379999999988754 33556777899999999999988774 223 468999999765433222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... .+............++. .+..
T Consensus 147 -----~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl~---------R~~~ 210 (243)
T d1q7ba_ 147 -----QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR--ALSDDQRAGILAQVPAG---------RLGG 210 (243)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHTTCTTS---------SCBC
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh--hhhhhHHHHHHhcCCCC---------CCCC
Confidence 346999999999999988776 4899999999998654321 12222233333332211 3567
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 229 CEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 229 v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+|+|.++++++... -.|+.+.+.+|-
T Consensus 211 pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 211 AQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 899999999988542 267889888763
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=4e-17 Score=154.76 Aligned_cols=217 Identities=17% Similarity=0.121 Sum_probs=158.5
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.++.|++|||||++.||+++++.|+++ +++|++.+|..... +.+. ......+.++++|++|+++++++++.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEG--KAMA-AELADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HHTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH-HHhhCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999 78999999864221 1111 11234688999999999998877632
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.+...
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~-------- 148 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVA-------- 148 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT--------
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccccc--------
Confidence 379999999998653 33556778899999999999987653 222 468999999766544332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+.... +. + .....++ ..+.
T Consensus 149 ------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~--~~----~---~~~~~pl-------~R~~ 206 (244)
T d1nffa_ 149 ------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--VP----E---DIFQTAL-------GRAA 206 (244)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--SC----T---TCSCCSS-------SSCB
T ss_pred ------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh--hh----H---HHHhccc-------cCCC
Confidence 2359999999999999887764 8999999999997654311 00 0 0011111 1367
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+|+|.++++++... -.|+++.+.+|-.
T Consensus 207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 207 EPVEVSNLVVYLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence 8899999999988532 2678898987753
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=1.8e-17 Score=158.79 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=159.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
.++|++|||||++.||+++++.|+++ |++|++.+|+.... +... ......++..+++|++|+++++++++.
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~--~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~ 84 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAA--NHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999 78899998864221 1110 012245789999999999998877633
Q ss_pred --CCCCEEEEccccCCc---CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+.+..+
T Consensus 85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~-------- 155 (255)
T d1fmca_ 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNIN-------- 155 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTT--------
T ss_pred HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccc--------
Confidence 379999999998653 345567778999999999998876543 23 358999999766543332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.|-.+.... .+.+...+.....-++. .+.
T Consensus 156 ------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-~~~~e~~~~~~~~~pl~---------R~g 219 (255)
T d1fmca_ 156 ------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPIR---------RLG 219 (255)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSSC---------SCB
T ss_pred ------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc-cCCHHHHHHHHhcCCCC---------CCc
Confidence 3469999999999998887763 8999999999997653210 11123333333322211 256
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+|+|.+++.++... -.|+++.+.+|.
T Consensus 220 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 220 QPQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 7799999999998543 267889898875
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=6e-17 Score=154.25 Aligned_cols=224 Identities=13% Similarity=0.050 Sum_probs=157.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
..++|++|||||++.||+++++.|+++ +++|++.+|....... . ...+..++++|++|+++++++++.
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~---~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEV---A---EAIGGAFFQVDLEDERERVRFVEEAAYA 73 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHH---H---HHHTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHH---H---HHcCCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999 6899999886432111 0 112457889999999998877643
Q ss_pred -CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++... .+-.++|++||...+-+...
T Consensus 74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~--------- 144 (248)
T d2d1ya1 74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------- 144 (248)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT---------
T ss_pred cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc---------
Confidence 379999999998653 3355567789999999999999877532 12468999999766543332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC----CCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF----PEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+... .........+...+..++ .
T Consensus 145 -----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~ 210 (248)
T d2d1ya1 145 -----NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------R 210 (248)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------S
T ss_pred -----cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------C
Confidence 3469999999999998877764 899999999998654210 000001111222222111 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKERR 258 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~s 258 (676)
.+...+|++.++++++... -.|+.+.+.+|-+.+
T Consensus 211 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 211 RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence 3567899999999988532 267889998875433
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.71 E-value=8.4e-17 Score=153.52 Aligned_cols=221 Identities=15% Similarity=0.106 Sum_probs=156.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.+.|++|||||++.||+++++.|+++ |++|++.+|..... +... .....++.++++|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEG--AATA-RELGDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHH-HTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH-HHhCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999 78999999864221 1111 11245689999999999998887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+....+
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~--------- 147 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLAL--------- 147 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT---------
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccc---------
Confidence 379999999998653 33555677899999999999988764 223 479999999766543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceee-cCCCceEeee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIH-GDGSNVRSYL 227 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+..+. .. .......-... ..+.. |--.
T Consensus 148 -----~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~------~~----~~~~~~~~~~~~~~pl~-R~g~ 211 (254)
T d1hdca_ 148 -----TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM------TA----ETGIRQGEGNYPNTPMG-RVGN 211 (254)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH------HH----HHTCCCSTTSCTTSTTS-SCB-
T ss_pred -----hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc------ch----hcCHHHHHHHHhCCCCC-CCCC
Confidence 3469999999999999888763 7999999999986431 11 11100000000 00001 1113
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..+|+|.++++++... -.|+.+.+.+|-+
T Consensus 212 ~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence 5799999999988543 2688899988743
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.71 E-value=7.8e-17 Score=154.66 Aligned_cols=223 Identities=18% Similarity=0.144 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.+.|++|||||++.||+++++.|+++ |++|++.+|..... +... .....++..+++|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l--~~~~-~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAA--RATA-AEIGPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHH--HHHH-HHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH-HHhCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 78999999864211 1111 11245788999999999999887743
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... +.+.+++...++.|+.++..+.+++.. .+.-.++|++||...+-+...
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------- 148 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--------- 148 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---------
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc---------
Confidence 389999999998653 235566788999999999999875432 222468999999765533322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHH-----------HHHHHCCCCceee
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKF-----------ILLAMKGKPLPIH 217 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 217 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+... ...... .+.....-+ +
T Consensus 149 -----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P--l- 218 (256)
T d1k2wa_ 149 -----VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD--GVDAKFADYENLPRGEKKRQVGAAVP--F- 218 (256)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH--HHHHHHHHHHTCCTTHHHHHHHHHST--T-
T ss_pred -----ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh--hhhhhhhhhccCChHHHHHHHHhcCC--C-
Confidence 3469999999999998887654 899999999998766420 111111 111111111 1
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
..+...+|+|.++++++... -.|+.+.+.+|..+
T Consensus 219 ------gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m 255 (256)
T d1k2wa_ 219 ------GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWM 255 (256)
T ss_dssp ------SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred ------CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence 13567799999999987532 26888999888654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.70 E-value=6.1e-17 Score=155.54 Aligned_cols=224 Identities=10% Similarity=-0.009 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILL---- 78 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~---- 78 (676)
+++|++|||||++.||+++++.|+++ +++|++.+|+.... +... ......++..+.+|++|+++++++++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l--~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKEL--NDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 81 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999 78899999864221 1110 01124568889999999999877653
Q ss_pred c-C-CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 79 T-E-KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 79 ~-~-~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
+ . ++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||.........
T Consensus 82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------- 154 (259)
T d2ae2a_ 82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY------- 154 (259)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT-------
T ss_pred HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc-------
Confidence 2 2 58999999998653 3455677789999999999988776431 22468999999665433222
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCC---CCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+.. ................-++.
T Consensus 155 -------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~-------- 219 (259)
T d2ae2a_ 155 -------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR-------- 219 (259)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC--------
T ss_pred -------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC--------
Confidence 3469999999999999888764 89999999999865421 00111112223333222211
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 220 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 220 -RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 2567799999999988543 267888888774
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.70 E-value=7.6e-17 Score=155.09 Aligned_cols=223 Identities=16% Similarity=0.106 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|...... .+.+ .....++..+.+|++|+++++++++.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~--~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASV--REKGVEARSYVCDVTSEEAVIGTVDSVVR 78 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999 788999988642211 0111 12345789999999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||...+.+...
T Consensus 79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~------- 151 (260)
T d1zema1 79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------- 151 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT-------
T ss_pred HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc-------
Confidence 379999999997532 3455677889999999999988876421 12468999999766543332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCC--------------CCCChHHHHHHHHHCCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ--------------FPEKLIPKFILLAMKGK 212 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~--------------~~~~~~~~~~~~~~~~~ 212 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+.. ........+.+.....-
T Consensus 152 -------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 152 -------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 2359999999999998887764 79999999999875421 00111222333333322
Q ss_pred CceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005818 213 PLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTK 254 (676)
Q Consensus 213 ~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~ 254 (676)
++. .+...+|+|.++++++.... .|+.+.+.+|
T Consensus 225 Pl~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 225 PMR---------RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TTS---------SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCC---------CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 211 24566899999999885422 5777877654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.70 E-value=1.1e-16 Score=153.60 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|...... ...+.......++..+++|++|+++++++++.
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999 789999988642211 11111122344788999999999998877643
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||...+-+...
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------- 152 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN------- 152 (258)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------
T ss_pred HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC-------
Confidence 379999999997532 2355677889999999999999876321 12468999999765433322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC------CCChHHHHHHHHHCCCCceeecCC
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF------PEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.+..+... .........+......++.
T Consensus 153 -------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~----- 220 (258)
T d1iy8a_ 153 -------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK----- 220 (258)
T ss_dssp -------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC-----
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC-----
Confidence 3469999999999998877753 899999999999754210 0011222333333332221
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+...+|+|.++++++... -.|+.+.+.+|.+
T Consensus 221 ----R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 221 ----RYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp ----SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred ----CCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 2567799999999988542 2678899988764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.70 E-value=5.1e-17 Score=155.99 Aligned_cols=221 Identities=15% Similarity=0.122 Sum_probs=144.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|+..... .+.+ .....++..+.+|++|+++++++++.
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH--HhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999 688999988642211 0011 11234689999999999998776632
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
..+|++||+||.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+-...
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~------- 153 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS------- 153 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc-------
Confidence 258999999998653 345567788999999999998886643 23 46899999965543222
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChH-HHHHHHHHCCCCceeecCCCceE
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-PKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
....|+.+|...+.+.+.++.+. |+++..+.||.|-.+... ... ....+..... .++ .
T Consensus 154 -------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~--~pl-------~ 215 (259)
T d1xq1a_ 154 -------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE--AVYDDEFKKVVISR--KPL-------G 215 (259)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred -------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh--hhchHHHHHHHHhC--CCC-------C
Confidence 13469999999999998887764 899999999999766431 111 1111111111 111 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 216 R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 216 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence 3556789999999888432 257788887774
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.69 E-value=9.6e-17 Score=154.04 Aligned_cols=219 Identities=19% Similarity=0.110 Sum_probs=154.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
|.+|||||++.||+++++.|+++ |++|++.+|..... +... ......++..+++|++|+++++++++. .
T Consensus 2 KValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l--~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATA--KAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 77 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 55799999999999999999999 78899999864221 1110 012245789999999999998877633 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+||.... +.+.+++...+++|+.++.++.+++. +.+.-.++|++||...+.+...
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~---------- 147 (255)
T d1gega_ 78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE---------- 147 (255)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT----------
T ss_pred CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc----------
Confidence 79999999998653 34556778899999999999887653 3333467999999765533332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHH-----------HHHHHHHCCCCceeec
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP-----------KFILLAMKGKPLPIHG 218 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 218 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+.. ..+.. .......+.-+ +
T Consensus 148 ----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p--l-- 217 (255)
T d1gega_ 148 ----LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW--AEIDRQVSEAAGKPLGYGTAEFAKRIT--L-- 217 (255)
T ss_dssp ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH--HHHHHHHHHHHTCCTTHHHHHHHTTCT--T--
T ss_pred ----cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHH--hhhhhhhHhhhcccchhHHHHHHhcCC--C--
Confidence 345999999999999887765 389999999999854421 00111 11111122211 1
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+...+|+|.++++++... -.|+.+.+.+|-
T Consensus 218 -----~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 218 -----GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred -----CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 13667899999999988532 267888888774
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.6e-16 Score=151.40 Aligned_cols=224 Identities=19% Similarity=0.168 Sum_probs=157.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
-.++|++|||||++.||+++++.|+++ +++|++.+|.... .+.+. ....++.++.+|++|+++++++++.
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~--~~~~~--~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESG--GRALE--QELPGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHH--HHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH--HhcCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999999 7899999886422 11111 1134688999999999998887743
Q ss_pred -CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++... .+-.++|++||...+-....
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~--------- 147 (250)
T d1ydea1 77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------- 147 (250)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT---------
T ss_pred cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC---------
Confidence 379999999996532 2344567789999999999988876532 01258999999765433221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCC----CCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ----FPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+.. ....-.....+......++.
T Consensus 148 -----~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--------- 213 (250)
T d1ydea1 148 -----AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG--------- 213 (250)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------
T ss_pred -----cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------
Confidence 3469999999999998887764 89999999999865421 00001112222222222211
Q ss_pred eeeeHHHHHHHHHHHHhcCC--CCceEEEcCCCc
Q 005818 225 SYLYCEDVAEAFDTILHKGE--VGHVYNIGTKKE 256 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~~~ 256 (676)
.+...+|+|+++++++.... .|+.+.+.+|-.
T Consensus 214 R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 214 RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred CCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 36678999999998875322 678888887753
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.69 E-value=8e-17 Score=153.95 Aligned_cols=225 Identities=12% Similarity=0.095 Sum_probs=157.1
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+-++.|++|||||++.||+++++.|+++ |++|++.+|..... +... ......++.++++|++|+++++++++.
T Consensus 2 nrL~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (251)
T d1zk4a1 2 NRLDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVG--EKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4467899999999999999999999999 78899998864221 1110 111245789999999999998877633
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++.. .+.-.++|++||...+-+...
T Consensus 78 ~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~------ 151 (251)
T d1zk4a1 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS------ 151 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT------
T ss_pred HHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC------
Confidence 379999999998753 335556778999999999999887642 221247999999765433221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.|-.+......- ..... .....+++
T Consensus 152 --------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~--~~~~~~pl------- 213 (251)
T d1zk4a1 152 --------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAM--SQRTKTPM------- 213 (251)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHH--TSTTTCTT-------
T ss_pred --------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHH--HHHhCCCC-------
Confidence 346999999999988876643 47999999999997553210000 11111 11111221
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+...+|+|.++++++... -.|+.+.+.+|-
T Consensus 214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence 13667899999999988532 267889888763
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=6.4e-17 Score=154.51 Aligned_cols=225 Identities=16% Similarity=0.130 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|...... .+.+. .....++..+++|++|+++++++++.
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~-~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH-HHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999 788999988642211 00110 11245688999999999998877743
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH-c--CCCceEEEEecccc-cCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI-T--GQIKRFIHVSTDEV-YGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~-~--~~~~~~v~~SS~~v-yg~~~~~~~~~~~ 149 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++.. . .+-.++|++||... ..+...
T Consensus 80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~------- 152 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN------- 152 (251)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS-------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc-------
Confidence 379999999998653 235567788999999999999887643 2 12458999998543 212111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.+-.+.......-+...+.....-++. .+
T Consensus 153 -------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~ 216 (251)
T d1vl8a_ 153 -------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------RT 216 (251)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------SC
T ss_pred -------ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------CC
Confidence 3469999999999998887764 8999999999997664310000012223333222221 24
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+|+|+++++++... -.|+++.+.+|-
T Consensus 217 ~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 217 GVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 56689999999888542 267889888774
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.69 E-value=4.4e-17 Score=157.06 Aligned_cols=231 Identities=13% Similarity=0.103 Sum_probs=154.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC---CCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN---PSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
++++|++|||||++.||+++++.|+++ |++|++.+|..... .+.+. ......++.++++|++|+++++++++.
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~-~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAE-IEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA 77 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHH-HHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 367899999999999999999999999 78999998864211 11110 011244788999999999998887743
Q ss_pred ----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.+...
T Consensus 78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~----- 151 (260)
T d1x1ta1 78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASAN----- 151 (260)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-----
T ss_pred HHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCC-----
Confidence 379999999998653 23556677899999999998887654 323 368999999766543322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCc---eeecCCC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPL---PIHGDGS 221 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 221 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.|-.+... ..+............. .......
T Consensus 152 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (260)
T d1x1ta1 152 ---------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE--KQISALAEKNGVDQETAARELLSEKQ 220 (260)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHC
T ss_pred ---------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh--hhhhhhhhhcCCChHHHHHHHHHhcC
Confidence 3469999999999999887764 799999999999765431 1111111000000000 0000000
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
....+...+|+|.++++++... -.|+++.+.+|
T Consensus 221 Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 0113667899999999988532 26788888877
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.69 E-value=1e-16 Score=154.08 Aligned_cols=221 Identities=18% Similarity=0.164 Sum_probs=158.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
+|.+|||||++.||+++++.|+++ |++|++.+|+..... .+.+ .....++..+++|++|+++++++++.
T Consensus 2 gKValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l--~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 578899999999999999999999 788999998642111 1111 12245789999999999998877632
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc-----CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT-----GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++.++.+++..+ ..-.++|++||...+-+...
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-------- 149 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-------- 149 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT--------
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc--------
Confidence 379999999998653 3355677889999999999999877431 11458999999765543332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC---------CCChHHHHHHHHHCCCCceeec
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMKGKPLPIHG 218 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 218 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+... .........+.....-++.
T Consensus 150 ------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg--- 220 (257)
T d2rhca1 150 ------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG--- 220 (257)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---
T ss_pred ------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---
Confidence 3459999999999999988874 799999999998644210 0011223333333332221
Q ss_pred CCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 219 DGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 219 ~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
-+...+|+|.++++++... -.|+.+.+.+|
T Consensus 221 ------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 221 ------RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp ------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ------CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 3667899999999988532 26788888776
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.68 E-value=2.6e-16 Score=152.30 Aligned_cols=231 Identities=19% Similarity=0.178 Sum_probs=160.3
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC-CCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN-PSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
|+-++.|++|||||++.||+++++.|+++ |++|++.+|..... +... ......++.++.+|++|+++++++++.
T Consensus 1 tnrL~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~--~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (268)
T d2bgka1 1 TNRLQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHG--QKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT 76 (268)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHhcCCCceEEEEccCCCHHHHHHHHHHH
Confidence 35578899999999999999999999999 78899998864221 1111 111234688899999999998887732
Q ss_pred ----CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||...+-.....
T Consensus 77 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~--- 153 (268)
T d2bgka1 77 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV--- 153 (268)
T ss_dssp HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS---
T ss_pred HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc---
Confidence 389999999997542 2234467788999999999998766421 124589999986554322211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCC--CChHHHHHHHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+.... ..--............ +. +
T Consensus 154 ----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~~-g--- 218 (268)
T d2bgka1 154 ----------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-LK-G--- 218 (268)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-SC-S---
T ss_pred ----------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-cC-C---
Confidence 225999999999999887776 48999999999998875421 1111122222211111 11 1
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
.+...+|+|.++++++... -.|+++.+.+|-+.
T Consensus 219 ---r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 219 ---TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ---CCcCHHHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence 3667899999999988532 26889999888543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.68 E-value=1.6e-16 Score=152.28 Aligned_cols=226 Identities=12% Similarity=0.012 Sum_probs=157.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----cC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----TE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----~~ 80 (676)
+++|+||||||++.||+++++.|+++ |++|+..+|+........-........+.++.+|++|+++++++++ ..
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 81 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999 6889999986422110000011234568889999999999877652 22
Q ss_pred --CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 81 --KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 81 --~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.+|++||+|+.... +.+.+++...+++|+.++..+.+++... +...++|++||.....+...
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~--------- 152 (258)
T d1ae1a_ 82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------- 152 (258)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT---------
T ss_pred CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc---------
Confidence 58999999998753 2355577889999999999988766421 12579999999776544332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC----ChHHHHHHHHHCCCCceeecCCCceE
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...+.+++.+++++ |+++..+.||.+..+..... .......+......++ .
T Consensus 153 -----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-------g-- 218 (258)
T d1ae1a_ 153 -----VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-------G-- 218 (258)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-------C--
T ss_pred -----chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-------C--
Confidence 3459999999999999988764 79999999999987643110 0111223333222221 1
Q ss_pred eeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 219 R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 219 RAGKPQEVSALIAFLCFPAASYITGQIIWADGGF 252 (258)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence 2678899999999998432 267788887764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.68 E-value=2.7e-16 Score=151.95 Aligned_cols=212 Identities=15% Similarity=0.129 Sum_probs=147.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNP--SRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
+-...+||||||+|.||.+++++|+++|.. .|++++|+..... .+.+.. .....++.++.+|++|++++.++++.
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i 84 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 84 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence 334579999999999999999999999533 5667777532211 111100 12345689999999999999888743
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|.|||+++..... .+.+++...+++|+.+++++.++++..+ ..+||++||...+-+..+
T Consensus 85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~---------- 153 (259)
T d2fr1a1 85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG---------- 153 (259)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT----------
T ss_pred cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcc----------
Confidence 2589999999987643 2334455778999999999999988765 689999999665543333
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
...|+.+|.+.+.++++++. .|++++.+.||.+.+++...... ... .... | ...+..+++
T Consensus 154 ----~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~~~----~~~-~~~~-------G---~~~~~~~~~ 213 (259)
T d2fr1a1 154 ----LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGPV----ADR-FRRH-------G---VIEMPPETA 213 (259)
T ss_dssp ----CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-----------------CTTT-------T---EECBCHHHH
T ss_pred ----cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccchH----HHH-HHhc-------C---CCCCCHHHH
Confidence 23499999999999987765 59999999999998876532211 111 1111 1 135678999
Q ss_pred HHHHHHHHhcCCCCc
Q 005818 233 AEAFDTILHKGEVGH 247 (676)
Q Consensus 233 a~ai~~~~~~~~~~~ 247 (676)
++++..++.++....
T Consensus 214 ~~~l~~~l~~~~~~~ 228 (259)
T d2fr1a1 214 CRALQNALDRAEVCP 228 (259)
T ss_dssp HHHHHHHHHTTCSSC
T ss_pred HHHHHHHHhCCCceE
Confidence 999999998765443
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.67 E-value=2.5e-16 Score=149.48 Aligned_cols=221 Identities=18% Similarity=0.166 Sum_probs=157.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
.+.|++|||||++.||+++++.|+++ +++|++.+|+.... +.. ......++.++++|++|+++++++++.
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~ 77 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLL--AEA-VAALEAEAIAVVADVSDPKAVEAVFAEALEEF 77 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHH-HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHH-HHHcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999 78999998875321 111 112245788999999999999877643
Q ss_pred CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
.++|++||+|+.... +.+.+++...++.|+.++..+.+++...- +-..++++||.+.....
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-------------- 143 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-------------- 143 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH--------------
T ss_pred CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc--------------
Confidence 379999999987653 23455677899999999999998876543 23345555554322111
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCED 231 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 231 (676)
....|+.+|...|.+.+.+++++ |+++.++.||.+-.+.. ..+.....+...+..++. .+...+|
T Consensus 144 -~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~--~~~~~~~~~~~~~~~p~~---------r~~~p~d 211 (241)
T d2a4ka1 144 -GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT--AGLPPWAWEQEVGASPLG---------RAGRPEE 211 (241)
T ss_dssp -HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG--TTSCHHHHHHHHHTSTTC---------SCBCHHH
T ss_pred -CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH--HhhhHhHHHHHHhCCCCC---------CCcCHHH
Confidence 12459999999999999988875 69999999999966533 223334444444333321 3667899
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 232 VAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 232 ~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+|+++++++... -.|+++.+.+|.+
T Consensus 212 va~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 212 VAQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 999999998542 2677888887753
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.67 E-value=1.1e-16 Score=152.26 Aligned_cols=219 Identities=17% Similarity=0.091 Sum_probs=155.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc-----C
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP--SRLSPNFKFIKGDVASADLVHFILLT-----E 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~-----~ 80 (676)
+.||||||++.||+++++.|+++ |++|++.+++.... .+.+.. .....++..+++|++|+++++++++. .
T Consensus 2 pV~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~-~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKA-AEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999999 78887765432111 111100 11234688999999999998877632 3
Q ss_pred CCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 81 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
++|++||+|+.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+-+..+
T Consensus 79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~---------- 147 (244)
T d1edoa_ 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIG---------- 147 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT----------
T ss_pred CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCC----------
Confidence 79999999998653 345567788999999999998876642 23 469999999765433222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+.. ..+.....+......++. .+...
T Consensus 148 ----~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~--~~~~~~~~~~~~~~~pl~---------R~~~p 212 (244)
T d1edoa_ 148 ----QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT--AKLGEDMEKKILGTIPLG---------RTGQP 212 (244)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH--HTTCHHHHHHHHTSCTTC---------SCBCH
T ss_pred ----CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH--HHhhHHHHHHHHhcCCCC---------CCcCH
Confidence 3469999999999999887764 89999999999865432 112233444444433321 35678
Q ss_pred HHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005818 230 EDVAEAFDTILHKG----EVGHVYNIGTKK 255 (676)
Q Consensus 230 ~D~a~ai~~~~~~~----~~~~~y~i~~~~ 255 (676)
+|+|.++++++.++ -.|+.+.+.+|-
T Consensus 213 ~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 213 ENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 99999999886332 267888887763
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=4e-16 Score=149.57 Aligned_cols=222 Identities=16% Similarity=0.043 Sum_probs=154.4
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
.+|++|||||++.||+++++.|+++ |++|++.+|...... ...+.......++.++++|++|+++++++++.
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999 789999998643211 11112222345789999999999998877632
Q ss_pred -CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHH----cC--CCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 80 -EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKI----TG--QIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
.++|++||+|+... .+++...++.|+.++.++.+++.. .+ .-.++|++||...+-+...
T Consensus 80 ~G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~---------- 145 (254)
T d2gdza1 80 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ---------- 145 (254)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT----------
T ss_pred cCCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC----------
Confidence 37999999999865 357889999999998887776642 11 1246999999765433222
Q ss_pred CCCCCChhHHHHHHHHHHHHH--HHH---HcCCCEEEEeeCCccCCCCCC----------CChHHHHHHHHHCCCCceee
Q 005818 153 QLLPTNPYSATKAGAEMLVMA--YGR---SYGLPVITTRGNNVYGPNQFP----------EKLIPKFILLAMKGKPLPIH 217 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~--~~~---~~~l~~~ilR~~~i~G~~~~~----------~~~~~~~~~~~~~~~~~~~~ 217 (676)
...|+.+|...+.+.+. ++. .+|+++..+.||.|-.+.... ......+.... ++
T Consensus 146 ----~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~------p~- 214 (254)
T d2gdza1 146 ----QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI------KY- 214 (254)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH------HH-
T ss_pred ----ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC------CC-
Confidence 34599999999988763 222 358999999999985432100 00111111111 11
Q ss_pred cCCCceEeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCCcccHH
Q 005818 218 GDGSNVRSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKKERRVI 260 (676)
Q Consensus 218 ~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~~~s~~ 260 (676)
..+...+|+|++++.++..+. .|+++.|.+|..+.++
T Consensus 215 ------~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 215 ------YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ 252 (254)
T ss_dssp ------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred ------CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence 024566999999999997654 6788999888765443
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.65 E-value=1.8e-16 Score=151.52 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=155.8
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 2 ATVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
|+.++.|++|||||++.||+++++.|+++ |++|++.+|.... .+.+. .....+...+++|++|+++++++++.
T Consensus 1 tnrL~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~--~~~~~-~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 75 (253)
T d1hxha_ 1 TNRLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAA--GQQLA-AELGERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHH--HHHHH-HHHCTTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH-HHhCCCeEEEEeecCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999 7889999986421 11111 11245688899999999998877633
Q ss_pred ---CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||...+-+...
T Consensus 76 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~-------- 147 (253)
T d1hxha_ 76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ-------- 147 (253)
T ss_dssp HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT--------
T ss_pred HHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc--------
Confidence 379999999998653 3355667889999999999888766431 12368999999765433221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCC---CCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.+|...+.+.+.++.+ +++++..+.||.|..+.. .+.... +....... .. ..
T Consensus 148 ------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~----~~~~~~~~-~~----~~ 212 (253)
T d1hxha_ 148 ------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDP-KL----NR 212 (253)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBT-TT----BT
T ss_pred ------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh----HHHHHhCc-cc----cc
Confidence 346999999999888876654 358999999999865421 000000 11111110 00 00
Q ss_pred eEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
...+...+|+|.++++++... -.|+.+++.+|
T Consensus 213 ~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 114677899999999988532 26788888776
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=9.6e-16 Score=149.86 Aligned_cols=226 Identities=13% Similarity=0.152 Sum_probs=157.0
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCC---CCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNL---NPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~---~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
..++|++|||||++.||+++++.|+++ |++|++.+|...... .+.+ .......++..+++|++|+++++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 467899999999999999999999999 788999988642211 1111 112234578999999999999887764
Q ss_pred c-----CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC
Q 005818 79 T-----EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|++||+|+.... +.+.+++...+++|+.++..+.+++... .+-.++|++||....+. .
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~-~----- 160 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-P----- 160 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-T-----
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-c-----
Confidence 2 379999999987653 2355567789999999999998876432 11356887776433221 1
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC--ChHHHHHHHHHCCCCceeecCCC
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--KLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
....|+.+|...+.+.+.++.++ |+++..+.||.|..+..... .....+.+..... +++
T Consensus 161 ---------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~pl----- 224 (297)
T d1yxma1 161 ---------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--IPA----- 224 (297)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--STT-----
T ss_pred ---------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc--CCC-----
Confidence 13469999999999999888764 89999999999977643110 0111111111111 111
Q ss_pred ceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
.-+...+|+|.++++++... -.|+++.|.+|.
T Consensus 225 --gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~ 259 (297)
T d1yxma1 225 --KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR 259 (297)
T ss_dssp --SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred --CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence 12556799999999998542 268889998874
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.65 E-value=1.3e-15 Score=145.58 Aligned_cols=218 Identities=16% Similarity=0.117 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCC-CHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVA-SADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~-d~~~~~~~~~~--- 79 (676)
++.|+||||||++.||..+++.|+++ |.+|+++.|..... ....+.......++.++.+|++ +.+.++++++.
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999 56666665543221 1111112233457899999998 55566555422
Q ss_pred --CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc------CCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 --EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT------GQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
.++|++||+||... .++++..+++|+.|+.++.+++... +...++|++||...+.+...
T Consensus 81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~--------- 147 (254)
T d1sbya1 81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------- 147 (254)
T ss_dssp HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT---------
T ss_pred HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC---------
Confidence 47999999999754 5678899999999999988866531 12367999999766543332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCC---CCC-ChHHHHHHHHHCCCCceeecCCCceE
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ---FPE-KLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|.....+.+.++.+. |+++..+.||.|..+.. ... .....+.+.. .+.
T Consensus 148 -----~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~------------ 209 (254)
T d1sbya1 148 -----VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LSH------------ 209 (254)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TTS------------
T ss_pred -----CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc-ccC------------
Confidence 3459999999999988877653 89999999999976511 000 0000111111 111
Q ss_pred eeeeHHHHHHHHHHHHhcCCCCceEEEcCCC
Q 005818 225 SYLYCEDVAEAFDTILHKGEVGHVYNIGTKK 255 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~~~~~~y~i~~~~ 255 (676)
.....+++|++++.+++....|+++.+.+|.
T Consensus 210 ~~~~~e~va~~~~~~~~~~~tG~vi~vdgG~ 240 (254)
T d1sbya1 210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp CCEEHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred CCCCHHHHHHHHHHhhhCCCCCCEEEECCCE
Confidence 2346799999999999887788899888774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=4.4e-16 Score=149.98 Aligned_cols=226 Identities=12% Similarity=0.046 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+++|++|||||+| .||+++++.|+++ |++|++.+|......... ...........+++|++|+++++++++.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 5679999999998 7999999999999 678888777542111000 0011233567899999999998877632
Q ss_pred --CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +...+++...++.|+.++..+.+++...- +-.++|++||.........
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~------ 156 (256)
T d1ulua_ 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK------ 156 (256)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT------
T ss_pred hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC------
Confidence 379999999987532 22334566788999999999988775321 1257999999665433322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+..+............+...+.-++. .
T Consensus 157 --------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R 219 (256)
T d1ulua_ 157 --------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------R 219 (256)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------S
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------C
Confidence 3469999999999999887764 8999999999998765432211123333333222211 2
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+...+|+|.++++++... -.|+.+.+.+|..
T Consensus 220 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 220 NITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 566799999999988542 2678898887743
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.64 E-value=1.6e-15 Score=143.27 Aligned_cols=213 Identities=10% Similarity=0.092 Sum_probs=150.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d 83 (676)
++.|+||||||++.||+++++.|+++ |++|++.+|.... .+ ....+++.+|+++. ++.++++ .++|
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~--l~-------~~~~~~~~~Dv~~~--~~~~~~~~g~iD 68 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEEL--LK-------RSGHRYVVCDLRKD--LDLLFEKVKEVD 68 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HH-------HTCSEEEECCTTTC--HHHHHHHSCCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HH-------hcCCcEEEcchHHH--HHHHHHHhCCCc
Confidence 56899999999999999999999999 7899999986421 11 12456788999863 3333332 5799
Q ss_pred EEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 155 (676)
++||+||.... +.+.+++...++.|+.++..+.+++. +.+ -.++|++||.........
T Consensus 69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~------------- 134 (234)
T d1o5ia_ 69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIEN------------- 134 (234)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------------
T ss_pred EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccc-------------
Confidence 99999997653 23555677889999999888887663 333 468999999765543332
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHH
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDV 232 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 232 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.+-.+.... ..-....+.....-++. .+...+|+
T Consensus 135 -~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~~pl~---------R~~~pedi 203 (234)
T d1o5ia_ 135 -LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIPMR---------RMAKPEEI 203 (234)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTSTTS---------SCBCHHHH
T ss_pred -cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh-hcCHHHHHHHHhcCCCC---------CCcCHHHH
Confidence 3359999999999888877764 8999999999987664310 00111222333322211 36678999
Q ss_pred HHHHHHHHhcC---CCCceEEEcCCC
Q 005818 233 AEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 233 a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
|.++++++... -.|+++.+.+|-
T Consensus 204 A~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 204 ASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHhChhhcCCcCcEEEECccc
Confidence 99999988532 267888888763
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.63 E-value=3.8e-16 Score=150.41 Aligned_cols=230 Identities=16% Similarity=0.120 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
.+.|++|||||++.||+++++.|+++ |++|++.+|...... .+.+ ......++..+++|++|+++++++++.
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~-~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHH-HHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH-HHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999999 789999998653211 0000 011245789999999999998877732
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+|+.... +.+.+++...++.|+.++.++.+++.. .+.-..++..||...+.......
T Consensus 84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~----- 158 (260)
T d1h5qa_ 84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----- 158 (260)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-----
T ss_pred HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc-----
Confidence 379999999987653 235566778999999999988776532 23245677777755443322110
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
........|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... .......+.....-++. .+
T Consensus 159 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl~---------R~ 225 (260)
T d1h5qa_ 159 --NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA--HMDKKIRDHQASNIPLN---------RF 225 (260)
T ss_dssp --TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG--GSCHHHHHHHHHTCTTS---------SC
T ss_pred --ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh--ccCHHHHHHHHhcCCCC---------CC
Confidence 00112346999999999999888765 4899999999999765432 12233334433332221 25
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 227 LYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
...+|+|.++++++... -.|+.+.+.+|.
T Consensus 226 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 226 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred cCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 56799999999888543 267889888875
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.63 E-value=7.2e-16 Score=156.45 Aligned_cols=202 Identities=13% Similarity=0.085 Sum_probs=137.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChH-HHHHHhhccCCCEEEECcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRS-QLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~-~~~~~~~~~~~d~Vih~a~ 441 (676)
+++|+|||||||||++|+++|+++||+| .++.+|+.|.. .+++++.++ |.+++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~--~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCC--ceEEeecc
Confidence 4689999999999999999999999865 67788998854 467778877 88887654
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhH
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTK 520 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK 520 (676)
.. ...|+..+.+++++|.+.|+ +++++||..... ..+..+...|..+|
T Consensus 81 ~~---------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~----------------~~~~~~~~~~~~~k 129 (350)
T d1xgka_ 81 SQ---------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHS----------------LYGPWPAVPMWAPK 129 (350)
T ss_dssp ST---------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGG----------------GTSSCCCCTTTHHH
T ss_pred cc---------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccc----------------cCCcccchhhhhhH
Confidence 22 13456778899999999996 677777654221 11223346688999
Q ss_pred HHHHHHHHHccCeEEEEeeecccCCCCCh----H--HHH-HHHHhcCceecc---CC---Cccc-hhhHHHHHHHHHhcC
Q 005818 521 AMVEELLKEYDNVCTLRVRMPISSDLNNP----R--NFI-TKISRYNKVVNI---PN---SMTI-LDELLPISVEMAKRN 586 (676)
Q Consensus 521 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~----~--~~~-~~~~~~~~~~~~---~~---~~~~-v~D~a~~~~~~~~~~ 586 (676)
...|..+.+.. ++++++|++..++. . .+. .....+...... ++ .+++ .+|+++++..++...
T Consensus 130 ~~~~~~~~~~~----~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~ 205 (350)
T d1xgka_ 130 FTVENYVRQLG----LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG 205 (350)
T ss_dssp HHHHHHHHTSS----SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhc----cCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence 99999887753 33444554433321 1 000 001111111111 11 4455 489999999988653
Q ss_pred ----CCceeEccCCCcccHHHHHHHHHhhcCCCCcccccch
Q 005818 587 ----LSGIWNFTNPGVVSHNEILEMYKAYIDPGFKWTNFTL 623 (676)
Q Consensus 587 ----~~g~yn~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 623 (676)
.+..|++++ +.+|+.|+++.+.+++|.++++.++|.
T Consensus 206 ~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 206 PQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp HHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred hhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence 245888886 679999999999999999877766653
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.63 E-value=9.3e-16 Score=145.22 Aligned_cols=202 Identities=15% Similarity=0.085 Sum_probs=144.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCC-----cEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPE-----YKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+.||||||++.||+++++.|+++|.. ..|++.+|.................++..+.+|++|+++++++++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999643 2477777764221100000112345688999999999998877632
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHHH----cCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKI----TGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
.++|++||+|+.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+.+..+
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~------- 153 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRH------- 153 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCC-------
Confidence 379999999998653 235567778999999999998877642 23 368999999766543332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEee
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSY 226 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+.... . .. .....+
T Consensus 154 -------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~--~----------~~--------~~~~~~ 206 (240)
T d2bd0a1 154 -------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK--V----------DD--------EMQALM 206 (240)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC--C----------CS--------TTGGGS
T ss_pred -------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh--c----------CH--------hhHhcC
Confidence 346999999999998887765 48999999999997654311 0 00 001124
Q ss_pred eeHHHHHHHHHHHHhcCC
Q 005818 227 LYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 227 v~v~D~a~ai~~~~~~~~ 244 (676)
...+|+|++++.++.++.
T Consensus 207 ~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 207 MMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp BCHHHHHHHHHHHHTSCT
T ss_pred CCHHHHHHHHHHHHcCCc
Confidence 567999999999997654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.62 E-value=8.8e-15 Score=140.04 Aligned_cols=217 Identities=13% Similarity=0.072 Sum_probs=142.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
|++|+||||||++.||.++++.|+++|+.+.|++.+|..... +.+. .....++.++.+|++|.++++++++.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~--~~l~-~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH--HHHH-HhhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 567999999999999999999999998778899888865321 2221 12345799999999999988766532
Q ss_pred --CCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHH----cC----------CCceEEEEecccccC
Q 005818 80 --EKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKI----TG----------QIKRFIHVSTDEVYG 138 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~----------~~~~~v~~SS~~vyg 138 (676)
.++|++||+||.... ..+.+++...+++|+.|+..+.+++.. .+ ...+++.+|+...+-
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 359999999997643 122334567899999999998876531 10 124677777744432
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCce
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLP 215 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 215 (676)
..... .....+...|+.||.....+.+.++.+. |+++..+.||.|--+... .
T Consensus 158 ~~~~~-------~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~---------------~--- 212 (250)
T d1yo6a1 158 TDNTS-------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG---------------K--- 212 (250)
T ss_dssp TTCCS-------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred cCCcc-------cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC---------------C---
Confidence 22111 1122334569999999999998887763 899999999988533110 0
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcCC--CCceEEEcCCCcc
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKGE--VGHVYNIGTKKER 257 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i~~~~~~ 257 (676)
...+..++.++.++..++... ..+.|..-++.++
T Consensus 213 --------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~ 248 (250)
T d1yo6a1 213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp --------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred --------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence 012345788888888886533 2233434444443
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.61 E-value=9.8e-16 Score=147.81 Aligned_cols=227 Identities=15% Similarity=0.089 Sum_probs=149.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPS-RLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++.|.+|||||++.||+++++.|+++ |++|++.+|...... .+.+... ....++..+++|++|+++++++++.
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 80 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999 788999998642111 0111111 1234689999999999998877743
Q ss_pred ---CCCCEEEEccccCCc--------CCcCCChHHHHHHHHHHHHHHHHHHHHc--CCCceEEEEec-ccccCCCCCCcC
Q 005818 80 ---EKIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKIT--GQIKRFIHVST-DEVYGETDEDAV 145 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~v~~SS-~~vyg~~~~~~~ 145 (676)
.++|++||+||.... ..+.+++...+++|+.++..+.+++... .+-..+|+++| .+.+.+...
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~--- 157 (264)
T d1spxa_ 81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD--- 157 (264)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---
T ss_pred HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC---
Confidence 379999999987532 1244567789999999999888776531 01235665555 333322221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-------ChHHHHHHHHHCCCCce
Q 005818 146 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMKGKPLP 215 (676)
Q Consensus 146 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~ 215 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.|-.+..... .-...........-++.
T Consensus 158 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~ 226 (264)
T d1spxa_ 158 -----------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG 226 (264)
T ss_dssp -----------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS
T ss_pred -----------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 2359999999999998887764 89999999999976532110 01111111111111111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcC----CCCceEEEcCCCc
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKG----EVGHVYNIGTKKE 256 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~----~~~~~y~i~~~~~ 256 (676)
-+...+|+|+++++++..+ -.|+.+.+.+|..
T Consensus 227 ---------R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 227 ---------VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp ---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred ---------CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 2566799999999988522 3688899987753
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=5.4e-15 Score=140.47 Aligned_cols=222 Identities=15% Similarity=0.078 Sum_probs=158.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-CCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT-EKID 83 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-~~~d 83 (676)
++.|++|||||++.||+++++.|+++ |++|++.+|.... .+. .....+++...+|+.+.+.++..... .++|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~--l~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id 76 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESK--LQE---LEKYPGIQTRVLDVTKKKQIDQFANEVERLD 76 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HGG---GGGSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHH--HHH---HHhccCCceeeeeccccccccccccccccce
Confidence 56799999999999999999999999 7899999986421 221 12245688999999998888877644 4799
Q ss_pred EEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccc-cCCCCCCcCCCCCCCCCCC
Q 005818 84 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEV-YGETDEDAVVGNHEASQLL 155 (676)
Q Consensus 84 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~~ 155 (676)
++||+|+..... .+.+++...+++|+.++..+.+++... .+-.++|++||... .. +..
T Consensus 77 ~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--------------~~~ 142 (245)
T d2ag5a1 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK--------------GVV 142 (245)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB--------------CCT
T ss_pred eEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC--------------Ccc
Confidence 999999987642 345567789999999999998766531 12468999988432 11 111
Q ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCC----CChHHHHHHHHHCCCCceeecCCCceEeeee
Q 005818 156 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMKGKPLPIHGDGSNVRSYLY 228 (676)
Q Consensus 156 p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 228 (676)
....|+.+|...+.+++.++.++ |+++..+.||.|-.+.... ......+.+.....-++ ..+..
T Consensus 143 ~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~ 213 (245)
T d2ag5a1 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFAT 213 (245)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEE
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcC
Confidence 24569999999999999887764 8999999999997653210 01111223333332221 13667
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 229 CEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 229 v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
.+|+++++..++.... .|+.+.|.+|-+
T Consensus 214 pedva~~v~fL~s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence 8999999999996432 678898887743
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=4.7e-15 Score=143.51 Aligned_cols=229 Identities=15% Similarity=0.120 Sum_probs=153.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPS-RLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.+.|++|||||++.||+++++.|+++ |++|++.+|....-. .+.+... ....++..+++|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999 789999998642110 1111111 1234689999999999998877632
Q ss_pred ---CCCCEEEEccccCCcC--------CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEec-ccccCCCCCCc
Q 005818 80 ---EKIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVST-DEVYGETDEDA 144 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS-~~vyg~~~~~~ 144 (676)
.++|++||+||..... .+.+++...+++|+.++..+.+++... + -..+|+++| .+...+...
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~~~~-- 157 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPD-- 157 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSCCCS--
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccCCCC--
Confidence 3799999999986532 122236778899999999988876532 1 134555544 443322221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCC----CCChHHHHHHHH-HCCCCcee
Q 005818 145 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF----PEKLIPKFILLA-MKGKPLPI 216 (676)
Q Consensus 145 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~----~~~~~~~~~~~~-~~~~~~~~ 216 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... +........... .....+++
T Consensus 158 ------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 225 (272)
T d1xkqa_ 158 ------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI 225 (272)
T ss_dssp ------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred ------------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC
Confidence 345999999999999888766 4899999999999655321 011111111111 11222222
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhc---C-CCCceEEEcCCCcc
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHK---G-EVGHVYNIGTKKER 257 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~---~-~~~~~y~i~~~~~~ 257 (676)
+ -+...+|+|.++++++.. . -.|+++.+.+|..+
T Consensus 226 ---g----R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 226 ---G----AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp ---S----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred ---C----CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 1 366789999999998842 2 36889999888543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=5.1e-15 Score=143.33 Aligned_cols=229 Identities=14% Similarity=0.067 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCC-CCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPS-RLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
.++|++|||||++.||+++++.|+++ |++|++.+|...... .+.+... ....++..+.+|++|+++++++++.
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 79 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999 788999988642110 0111111 1234689999999999998877633
Q ss_pred ---CCCCEEEEccccCCcC------CcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
.++|++||+||..... .+.+++...+++|+.++..+.+++... ++-.+++++||...+....+
T Consensus 80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~----- 154 (274)
T d1xhla_ 80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG----- 154 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT-----
T ss_pred HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC-----
Confidence 3799999999865321 233457789999999999988777532 22467888887554332222
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCC---CC-ChHHHHHHHHH-CCCCceeecC
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---PE-KLIPKFILLAM-KGKPLPIHGD 219 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~---~~-~~~~~~~~~~~-~~~~~~~~~~ 219 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+... .. .....+..... ....+|+ +
T Consensus 155 ---------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-g- 223 (274)
T d1xhla_ 155 ---------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-G- 223 (274)
T ss_dssp ---------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S-
T ss_pred ---------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-C-
Confidence 2359999999999998877664 899999999999765211 00 01111111111 1122222 1
Q ss_pred CCceEeeeeHHHHHHHHHHHHhc--C--CCCceEEEcCCCc
Q 005818 220 GSNVRSYLYCEDVAEAFDTILHK--G--EVGHVYNIGTKKE 256 (676)
Q Consensus 220 ~~~~~~~v~v~D~a~ai~~~~~~--~--~~~~~y~i~~~~~ 256 (676)
.+...+|+|.++++++.. . -.|+.+.+.+|..
T Consensus 224 -----R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 224 -----HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp -----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred -----CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 356789999999988842 2 3688899988753
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.61 E-value=2.7e-15 Score=144.38 Aligned_cols=226 Identities=16% Similarity=0.082 Sum_probs=154.2
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
+..+|+||||||++.||.++++.|+++ |++|++..+...... +.. .......++..+++|++|+++++.++..
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~-~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 79 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAA-EEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 79 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHH-HHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999 788877655432110 100 0112345789999999999998877632
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEec-ccccCCCCCCcCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVST-DEVYGETDEDAVVGNHE 150 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS-~~vyg~~~~~~~~~~~e 150 (676)
.++|++||+||..... .+.+++...++.|+.+..++.+++..+ .+-.+++.++| .+.+.+...
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~-------- 151 (259)
T d1ja9a_ 80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN-------- 151 (259)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--------
T ss_pred HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC--------
Confidence 3799999999987532 344566789999999999998877642 11235555555 343322221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCC----------C-CCCChHHHHHHHHHCCCCcee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN----------Q-FPEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~----------~-~~~~~~~~~~~~~~~~~~~~~ 216 (676)
...|+.+|...+.+++.++.+ +|+++..+.||.+-.+. . ........+.+...+..++.
T Consensus 152 ------~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~- 224 (259)
T d1ja9a_ 152 ------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK- 224 (259)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS-
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC-
Confidence 345999999999999888776 38999999999985431 1 11112233344444333321
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+...+|+++++++++.... .|+.+.+.+|.
T Consensus 225 --------R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 225 --------RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --------CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 35678999999999986432 67788887763
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=5.6e-15 Score=141.48 Aligned_cols=213 Identities=16% Similarity=0.078 Sum_probs=146.2
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
++.|++|||||++.||.++++.|+++ |++|++.+|....-. .+.+.......++..+++|++|+++++++++.
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44789999999999999999999999 688999888642111 11111122234688999999999998877632
Q ss_pred --CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcC-CCceEEEEecccccCCCCCCcCCCC
Q 005818 80 --EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITG-QIKRFIHVSTDEVYGETDEDAVVGN 148 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~~~v~~SS~~vyg~~~~~~~~~~ 148 (676)
.++|++||+|+.... +.+.+++...++.|+.+...+.+++. +.+ +-.++|++||.+.+...+.
T Consensus 86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~------ 159 (257)
T d1xg5a_ 86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------ 159 (257)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------
T ss_pred hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC------
Confidence 379999999998653 34556677899999999988876653 222 2368999999765432211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCC--CCCChHHHHHHHHHCCCCceeecCCC
Q 005818 149 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMKGKPLPIHGDGS 221 (676)
Q Consensus 149 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (676)
.....|+.+|...+.+.+.++.+ +++++..+-||.+-.+.. ............. +
T Consensus 160 ------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~------~------ 221 (257)
T d1xg5a_ 160 ------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY------E------ 221 (257)
T ss_dssp ------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH------C------
T ss_pred ------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC------C------
Confidence 11235999999999999887653 479999999998754321 0011111111111 1
Q ss_pred ceEeeeeHHHHHHHHHHHHhcCC
Q 005818 222 NVRSYLYCEDVAEAFDTILHKGE 244 (676)
Q Consensus 222 ~~~~~v~v~D~a~ai~~~~~~~~ 244 (676)
...++..+|+|++++.++..+.
T Consensus 222 -~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 222 -QMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp ----CBCHHHHHHHHHHHHHSCT
T ss_pred -CCCCcCHHHHHHHHHHHhCChh
Confidence 1136778999999999987653
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.59 E-value=6.7e-15 Score=142.63 Aligned_cols=220 Identities=19% Similarity=0.148 Sum_probs=150.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
++.|+||||||++.||+++++.|+++ |++|++.+|.... .+.+. .....++..+.+|++|++++++++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~--l~~~~-~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAER--LAELE-TDHGDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHH-HHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHH-HHcCCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 45799999999999999999999999 7899999986421 11111 11234689999999999998877632
Q ss_pred CCCCEEEEccccCCcCC-----cCC----ChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCC
Q 005818 80 EKIDTIMHFAAQTHVDN-----SFG----NSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~-----~~~----~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+||...... ..+ ++...+++|+.++..+.+++. +.+ .++|++||...+-+...
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~---- 151 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGG---- 151 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSS----
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCC----
Confidence 38999999999754221 112 366889999999998887664 333 57888888654322221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCCccCCCCCCC-------C-hHHHHHHHHHCCCCcee
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE-------K-LIPKFILLAMKGKPLPI 216 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~i~G~~~~~~-------~-~~~~~~~~~~~~~~~~~ 216 (676)
...|+.+|...+.+.+.++.+. ++++..+.||.|-.+...+. . ....+.+.....-++.
T Consensus 152 ----------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg- 220 (276)
T d1bdba_ 152 ----------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG- 220 (276)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS-
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC-
Confidence 2359999999999998887764 48999999999865532111 0 0111222222222211
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhc---C-CCCceEEEcCC
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHK---G-EVGHVYNIGTK 254 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~---~-~~~~~y~i~~~ 254 (676)
-+...+|+|.++++++.. . -.|+.+++.+|
T Consensus 221 --------R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 221 --------RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp --------SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred --------CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 245569999999887742 2 36889999877
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.7e-15 Score=142.02 Aligned_cols=202 Identities=12% Similarity=-0.023 Sum_probs=144.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc-----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----- 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----- 78 (676)
...+|.||||||++.||+++++.|+++ |++|++.+|....-............++..+.+|++|++.++++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999 7899999996522110000011234678999999999999887763
Q ss_pred cCCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHE 150 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 150 (676)
..++|++||+|+..... .+.+++...+++|+.|+.++.+++- +.+ -.++|++||...+-+...
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~-------- 152 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPF-------- 152 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHH--------
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCC--------
Confidence 23699999999987643 2344566889999999999887553 333 468999999765533222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceE
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS------YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVR 224 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (676)
...|+.+|...+.+.+.++.+ .|+.+..+.||.|--+... ... .. ..
T Consensus 153 ------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~--~~~------------~~-------~~ 205 (244)
T d1yb1a_ 153 ------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--NPS------------TS-------LG 205 (244)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT--CTH------------HH-------HC
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh--CcC------------cc-------cc
Confidence 235999999999999888765 3799999999988554321 100 00 01
Q ss_pred eeeeHHHHHHHHHHHHhcC
Q 005818 225 SYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 225 ~~v~v~D~a~ai~~~~~~~ 243 (676)
.++..+|+++.+...+...
T Consensus 206 ~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 206 PTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp CCCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 3456789999998877654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.56 E-value=9.7e-15 Score=137.69 Aligned_cols=192 Identities=12% Similarity=0.080 Sum_probs=137.4
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------eeccccCCChHHHHHHhhcc-----CCCEEEECccccC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGVTG 444 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~ 444 (676)
+.++++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++|++||+||...
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~ 85 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA 85 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccc
Confidence 45789999999999999999999999876 55789999999988887765 6899999999653
Q ss_pred CCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 445 RPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 445 ~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
... .+...++.+..+++|+.++..+.+++.. .+ .++|++||..... +......|+.
T Consensus 86 ~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~------------------~~~~~~~Y~a 147 (237)
T d1uzma1 86 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW------------------GIGNQANYAA 147 (237)
T ss_dssp -----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHH
T ss_pred cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc------------------CCcccHHHHH
Confidence 111 1223455667899999999988876643 33 4788998875542 1123367999
Q ss_pred hHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH------HHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---
Q 005818 519 TKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTILDELLPISVEMAKRN--- 586 (676)
Q Consensus 519 sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--- 586 (676)
||...+.+.+.+. ...++|+..+.|+.+.-+.. ......... .. +-+...+|+|.+++.++...
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~---pl-~R~~~pedvA~~v~fL~S~~s~~ 223 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFI---PA-KRVGTPAEVAGVVSFLASEDASY 223 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGC---TT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcC---CC-CCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999988863 34689999999999986631 111121111 11 24567899999999988543
Q ss_pred CCc-eeEccCC
Q 005818 587 LSG-IWNFTNP 596 (676)
Q Consensus 587 ~~g-~yn~~~~ 596 (676)
.+| ++.+.+|
T Consensus 224 itG~~i~vdGG 234 (237)
T d1uzma1 224 ISGAVIPVDGG 234 (237)
T ss_dssp CCSCEEEESTT
T ss_pred CcCCeEEECCC
Confidence 234 7777665
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.56 E-value=3.8e-14 Score=137.32 Aligned_cols=226 Identities=14% Similarity=0.043 Sum_probs=154.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CCCCCCCeEEEEecCCCHHHHHHHHcc--
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PSRLSPNFKFIKGDVASADLVHFILLT-- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~-- 79 (676)
++++|++|||||++.||+++++.|+++ |++|++.+++..... +... .......+..+++|++|++++.++++.
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~-~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESA-EEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHH-HHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999 788888877542210 1000 112345789999999999998877632
Q ss_pred ---CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccc-cCCCCCCcCCCCCC
Q 005818 80 ---EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEV-YGETDEDAVVGNHE 150 (676)
Q Consensus 80 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~v-yg~~~~~~~~~~~e 150 (676)
.++|++||.++..... ...+++...++.|+.++..+.+++... .+-.++++++|... .+..
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~---------- 161 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---------- 161 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC----------
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc----------
Confidence 3799999999886542 344566788899999999999887642 22347777777432 1111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCC---------CCCC-hHHHHHH-HHHCCCCcee
Q 005818 151 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQ---------FPEK-LIPKFIL-LAMKGKPLPI 216 (676)
Q Consensus 151 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~---------~~~~-~~~~~~~-~~~~~~~~~~ 216 (676)
.....|+.+|...+.+++.++.+ +|+++..+.||.+-.+.. .... .-....+ ......++.
T Consensus 162 ----~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg- 236 (272)
T d1g0oa_ 162 ----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR- 236 (272)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC-
T ss_pred ----cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC-
Confidence 12345999999999999887776 489999999999864310 0001 1111111 111121111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
.+...+|+|.+++.++.... .|+.+.+.+|.
T Consensus 237 --------R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 237 --------RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp --------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred --------CCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 36778999999999986432 67788888774
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.56 E-value=1.3e-14 Score=139.60 Aligned_cols=222 Identities=15% Similarity=0.104 Sum_probs=149.8
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcC-CCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNY-PEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
+.+.+|.++||||++.||.++++.|++.. .|++|++.+|...... .+.+.......++..+++|++|++++++++..
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 45778999999999999999999998732 3799999998642211 01111112244689999999999998877621
Q ss_pred ---------CCCCEEEEccccCCc-------CCcCCChHHHHHHHHHHHHHHHHHHHHcC-----CCceEEEEecccccC
Q 005818 80 ---------EKIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACKITG-----QIKRFIHVSTDEVYG 138 (676)
Q Consensus 80 ---------~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-----~~~~~v~~SS~~vyg 138 (676)
..+|+++|.|+.... ..+.+++...+++|+.++..+.+++...= .-.++|++||...+.
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~ 161 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence 256789999987532 12334566789999999999998876431 124799999976544
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-cCCCEEEEeeCCccCCCCC-------CCChHHHHHHHHHC
Q 005818 139 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQF-------PEKLIPKFILLAMK 210 (676)
Q Consensus 139 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~l~~~ilR~~~i~G~~~~-------~~~~~~~~~~~~~~ 210 (676)
+... ...|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... .......+......
T Consensus 162 ~~~~--------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (259)
T d1oaaa_ 162 PYKG--------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD 227 (259)
T ss_dssp CCTT--------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT
T ss_pred CCcc--------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC
Confidence 3322 346999999999999988776 4899999999998765210 00011111111111
Q ss_pred CCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC--CCceEEE
Q 005818 211 GKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE--VGHVYNI 251 (676)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~--~~~~y~i 251 (676)
+ .+...+|+|++++.+++... .|+.+++
T Consensus 228 ~-------------r~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 228 G-------------ALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp T-------------CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred C-------------CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 1 24567999999999886543 3444443
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=2.2e-14 Score=136.22 Aligned_cols=197 Identities=12% Similarity=0.129 Sum_probs=141.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc-----CCCEEEEC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNA 439 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~ 439 (676)
+.++++||||++.||+++++.|+++|++| .++++|++|+++++++++.+ ++|++||+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn 83 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 45789999999999999999999999876 56789999999988887765 78999999
Q ss_pred ccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 440 AGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 440 a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
||.... |-.+...++.+..+++|+.++.++.+++... +.++|++||...+. +....
T Consensus 84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~------------------~~~~~ 145 (248)
T d2d1ya1 84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------------------AEQEN 145 (248)
T ss_dssp CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------------BCTTB
T ss_pred CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc------------------ccccc
Confidence 996531 1112233455678999999999999988542 35788888875441 12234
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc----ee------ccCCCccchhhHHHHHH
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK----VV------NIPNSMTILDELLPISV 580 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~------~~~~~~~~v~D~a~~~~ 580 (676)
..|+.+|...+.+.+.+. ..+++|+..+-|+.+..|.. ........ .. ....-+...+|++.+++
T Consensus 146 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~ 223 (248)
T d2d1ya1 146 AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 223 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchH--HHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 679999999999988863 24689999999999876631 11111100 00 00113557899999999
Q ss_pred HHHhcC---CCc-eeEccCCCcc
Q 005818 581 EMAKRN---LSG-IWNFTNPGVV 599 (676)
Q Consensus 581 ~~~~~~---~~g-~yn~~~~~~~ 599 (676)
.++... .+| ++.+.+|-..
T Consensus 224 fL~S~~s~~itG~~i~vDGG~ta 246 (248)
T d2d1ya1 224 FLASEKASFITGAILPVDGGMTA 246 (248)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhCchhcCCCCcEEEcCcCccc
Confidence 988543 334 7887776443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=2.1e-14 Score=137.09 Aligned_cols=193 Identities=16% Similarity=0.141 Sum_probs=140.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
+.++++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34799999999999999999999999754 67889999999998887765 78
Q ss_pred CEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 434 THVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 434 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
|++||+||.......+...++.+..+++|+.++..+.+++..+ +.++|++||...+.
T Consensus 90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~------------------ 151 (255)
T d1fmca_ 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------ 151 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------------
T ss_pred CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc------------------
Confidence 9999999976432333345566678999999999998877442 34677887765431
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH-------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
+......|+.||...+.+.+.+.. .+++|+..+-|+.+..+. .....+....+ . +-+...+|+|.+
T Consensus 152 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~p---l-~R~g~pedvA~~ 227 (255)
T d1fmca_ 152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---I-RRLGQPQDIANA 227 (255)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS---S-CSCBCHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCC---C-CCCcCHHHHHHH
Confidence 123346799999999999988642 357999999999887653 12222222211 1 235568999999
Q ss_pred HHHHHhcC---CCc-eeEccCCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~~ 597 (676)
++.++... .+| ++.+.+|.
T Consensus 228 v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 228 ALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCchhcCCcCCEEEECcCc
Confidence 99988543 244 77777664
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.1e-14 Score=138.46 Aligned_cols=222 Identities=18% Similarity=0.098 Sum_probs=145.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCC-cEEEEEcCCCcccc-ccCC--CCCCCCCCeEEEEecCCCHHHHHHHHcc---
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPE-YKIVVLDKLDYCSN-LKNL--NPSRLSPNFKFIKGDVASADLVHFILLT--- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~-~~~~--~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--- 79 (676)
+|.||||||++.||+++++.|+++|.. +.|....|...... .... .......++..+.+|++|++++.+++..
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 466899999999999999999999643 34444444321110 0000 1122355799999999999999888743
Q ss_pred CCCCEEEEccccCCcC----CcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCC
Q 005818 80 EKIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEA 151 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 151 (676)
..+|+++|+|+..... .+.+++...+++|+.|+.++.+++. +.+ -.++|++||...+-+...
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~--------- 151 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPF--------- 151 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTT---------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCC---------
Confidence 3799999999887643 3445667889999999998887653 333 468999999765433222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCC--C-----------hHHHHHHHHHCCCCce
Q 005818 152 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--K-----------LIPKFILLAMKGKPLP 215 (676)
Q Consensus 152 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~--~-----------~~~~~~~~~~~~~~~~ 215 (676)
...|+.+|...+.+.+.++.+ +|+++.++.||.|--+..... . ....+.+.......++
T Consensus 152 -----~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (285)
T d1jtva_ 152 -----NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF 226 (285)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh
Confidence 346999999999999887776 489999999999865432100 0 0011111111111111
Q ss_pred eecCCCceEeeeeHHHHHHHHHHHHhcCCCCceEE
Q 005818 216 IHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYN 250 (676)
Q Consensus 216 ~~~~~~~~~~~v~v~D~a~ai~~~~~~~~~~~~y~ 250 (676)
. ......+|+|++++.+++.+.+.-.|.
T Consensus 227 ~-------~~~~~PeeVA~~v~~~~~~~~p~~ry~ 254 (285)
T d1jtva_ 227 R-------EAAQNPEEVAEVFLTALRAPKPTLRYF 254 (285)
T ss_dssp H-------HHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred c-------ccCCCHHHHHHHHHHHHhCCCCCeEEe
Confidence 0 024467999999999998766554453
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.54 E-value=1.7e-14 Score=136.34 Aligned_cols=195 Identities=14% Similarity=0.071 Sum_probs=140.2
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.+.++++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 345789999999999999999999999865 66789999999988887665 7899
Q ss_pred EEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||..... -.+...++....+++|+.++..+.+++.. . +.++|++||...+. +
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------------~ 145 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA------------------G 145 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------C
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc------------------c
Confidence 99999975311 11223455567899999999999887633 2 35889998875441 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
......|+.+|...+.+.+.+. ..+++|+..+-|+.+..|.. ..+......... +-+...+|+|+++++++...
T Consensus 146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~--~~~~~~~~~~pl-~R~~~p~diA~~v~fL~s~~ 222 (244)
T d1nffa_ 146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPEDIFQTAL-GRAAEPVEVSNLVVYLASDE 222 (244)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG--TTSCTTCSCCSS-SSCBCHHHHHHHHHHHHSGG
T ss_pred cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH--hhhhHHHHhccc-cCCCCHHHHHHHHHHHhChh
Confidence 1223679999999999998864 34689999999998876531 111111111111 24668899999999988543
Q ss_pred ---CCc-eeEccCCC
Q 005818 587 ---LSG-IWNFTNPG 597 (676)
Q Consensus 587 ---~~g-~yn~~~~~ 597 (676)
.+| ++.+.+|.
T Consensus 223 s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 223 SSYSTGAEFVVDGGT 237 (244)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCCEEEECCCe
Confidence 334 77776653
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.54 E-value=5.1e-14 Score=133.24 Aligned_cols=192 Identities=14% Similarity=0.096 Sum_probs=136.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-----CCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~ 439 (676)
.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++||+
T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn 84 (242)
T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY 84 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEEC
Confidence 4689999999999999999999999865 67789999999999888766 78999999
Q ss_pred ccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 440 AGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 440 a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
||..... ..+...++.+..+++|+.++..+.+++.+. +...++++|+.... +.....
T Consensus 85 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------------~~~~~~ 146 (242)
T d1ulsa_ 85 AGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------------GNLGQA 146 (242)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------------CCTTCH
T ss_pred CcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------------CCCCCc
Confidence 9975311 112334556678999999999999887653 33444444443221 112346
Q ss_pred chhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 515 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
.|+.||...+.+.+.+. ...++|+..+.|+.+.-+. .+...+....+ . +-+...+|+|.+++.++..
T Consensus 147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~p---l-~R~~~pedia~~v~fL~S~ 222 (242)
T d1ulsa_ 147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATP---L-GRAGKPLEVAYAALFLLSD 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCT---T-CSCBCHHHHHHHHHHHHSG
T ss_pred chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCC---C-CCCCCHHHHHHHHHHHhch
Confidence 79999999999998863 2457999999999887553 22333332222 1 2355689999999998854
Q ss_pred C---CCc-eeEccCCC
Q 005818 586 N---LSG-IWNFTNPG 597 (676)
Q Consensus 586 ~---~~g-~yn~~~~~ 597 (676)
. .+| ++.+.+|.
T Consensus 223 ~s~~itG~~i~vDGG~ 238 (242)
T d1ulsa_ 223 ESSFITGQVLFVDGGR 238 (242)
T ss_dssp GGTTCCSCEEEESTTT
T ss_pred hhCCCCCcEEEECCCc
Confidence 3 234 77776654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=3.8e-14 Score=134.23 Aligned_cols=192 Identities=12% Similarity=0.062 Sum_probs=140.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHVF 437 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vi 437 (676)
.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++|
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 83 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILV 83 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceeh
Confidence 4689999999999999999999999865 66789999999988887765 689999
Q ss_pred ECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCC
Q 005818 438 NAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNF 511 (676)
Q Consensus 438 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~ 511 (676)
|+||...... .+...++....+++|+.++..+.+++.. . +.++|++||...+. +..
T Consensus 84 nnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~------------------~~~ 145 (243)
T d1q7ba_ 84 NNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM------------------GNG 145 (243)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------------------CCT
T ss_pred hhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC------------------CCC
Confidence 9999753212 1223345567799999999999998743 2 46889998875442 112
Q ss_pred CCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 512 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 512 p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
....|+.||...+.+.+.+. ..+++|+..+.|+.+.-+. .....+....+ . +-+...+|+|.+++.+
T Consensus 146 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~p---l-~R~~~pedvA~~v~fL 221 (243)
T d1q7ba_ 146 GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVP---A-GRLGGAQEIANAVAFL 221 (243)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCT---T-SSCBCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCC---C-CCCCCHHHHHHHHHHH
Confidence 34679999999999998863 3468999999999887653 11122221111 1 2356789999999998
Q ss_pred HhcC---CCc-eeEccCCC
Q 005818 583 AKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 583 ~~~~---~~g-~yn~~~~~ 597 (676)
+... .+| ++++.+|-
T Consensus 222 ~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 222 ASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred hCchhcCCcCCeEEECCCe
Confidence 8543 234 77776653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.53 E-value=1.9e-14 Score=140.66 Aligned_cols=211 Identities=16% Similarity=0.068 Sum_probs=145.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC------CCCCCCeEEEEecCCCHHHHHHHHc-
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP------SRLSPNFKFIKGDVASADLVHFILL- 78 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~------~~~~~~v~~v~~Dl~d~~~~~~~~~- 78 (676)
+.|++|||||++.||+++++.|+++ |++|++.++............ .........+.+|+.|.++.+++++
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 4789999999999999999999999 788998887643211100000 0011234567789998877665542
Q ss_pred ---c-CCCCEEEEccccCCc----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCC
Q 005818 79 ---T-EKIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 ---~-~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
. .++|++||+||.... +.+.+++...+++|+.++.++.+++. +.+ -.++|++||...+-+..+
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~---- 158 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG---- 158 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT----
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC----
Confidence 2 379999999998754 34556778899999999999988764 333 469999999665433222
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.+. |+++..+.||.+-.+... .+...+.
T Consensus 159 ----------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~--~~~~~~~------------------ 208 (302)
T d1gz6a_ 159 ----------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET--VMPEDLV------------------ 208 (302)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG--GSCHHHH------------------
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh--cCcHhhH------------------
Confidence 3459999999999999887764 899999999977433221 0101111
Q ss_pred EeeeeHHHHHHHHHHHHhcC--CCCceEEEcCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG--EVGHVYNIGTK 254 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~--~~~~~y~i~~~ 254 (676)
.++..+|+|.++++++... -.|+++.+.+|
T Consensus 209 -~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 209 -EALKPEYVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp -HHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred -hcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 1233589999999887432 25777888766
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.53 E-value=1.4e-14 Score=138.35 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=147.7
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----c-CCCC
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----T-EKID 83 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----~-~~~d 83 (676)
++|||||++.||+++++.|+++ |++|++.+|..... +.+. .....+..+|+.|.++++++++ . .++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~--~~~~----~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQK--DELE----AFAETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSH--HHHH----HHHHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHH----hhhCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 7899999999999999999999 68899888854221 1110 0011233577777766655542 1 3799
Q ss_pred EEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 84 TIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 84 ~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++||+|+.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.....
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~------------ 140 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKE------------ 140 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTT------------
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccccc------------
Confidence 99999986432 23445677889999999998887654 323 468999999766544332
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCC------hHHHHHHHHHCCCCceeecCCCceEe
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK------LIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+...... ..+.......+..++. -
T Consensus 141 --~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R 209 (252)
T d1zmta1 141 --LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------R 209 (252)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------S
T ss_pred --ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------C
Confidence 2359999999999999887764 899999999999776432110 1112223332222211 2
Q ss_pred eeeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005818 226 YLYCEDVAEAFDTILHKGE---VGHVYNIGTKK 255 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~ 255 (676)
+...+|+|.++++++.... .|+.+.+.+|-
T Consensus 210 ~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 210 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 242 (252)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence 5678999999999986433 67889998774
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=7.3e-14 Score=132.63 Aligned_cols=194 Identities=15% Similarity=0.086 Sum_probs=140.4
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
.+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 456799999999999999999999999865 67789999999999888765 78999
Q ss_pred EECccccCCCC-c-chhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRPN-V-DWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~~-~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||....+. . +...++.+..+++|+.++..+.+++.. .+.++|++||..... +.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~------------------~~ 145 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI------------------GQ 145 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH------------------CC
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc------------------cc
Confidence 99999653211 1 223345567899999999999887753 356889988875442 11
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCCCccchhhH
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPNSMTILDEL 575 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~~~~~v~D~ 575 (676)
.....|+.+|...+.+.+.+. ...++|+..+.|+.+.-|. ..+.+.....+ .+-+...+|+
T Consensus 146 ~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p----l~R~g~p~ev 221 (250)
T d1ydea1 146 AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP----LGRMGQPAEV 221 (250)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST----TSSCBCHHHH
T ss_pred cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC----CCCCCCHHHH
Confidence 234679999999999998863 3468999999999887552 11111111111 1246678999
Q ss_pred HHHHHHHHhcC--CCc-eeEccCCC
Q 005818 576 LPISVEMAKRN--LSG-IWNFTNPG 597 (676)
Q Consensus 576 a~~~~~~~~~~--~~g-~yn~~~~~ 597 (676)
|.+++.++... .+| ++.+.+|-
T Consensus 222 a~~v~fL~Sda~~itG~~i~vDGG~ 246 (250)
T d1ydea1 222 GAAAVFLASEANFCTGIELLVTGGA 246 (250)
T ss_dssp HHHHHHHHHHCTTCCSCEEEESTTT
T ss_pred HHHHHHHhCccCCCcCCeEEECCCc
Confidence 99999887422 234 67776654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.52 E-value=6.3e-14 Score=137.76 Aligned_cols=226 Identities=15% Similarity=0.121 Sum_probs=151.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILL---- 78 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~---- 78 (676)
.++|++|||||+|.||+++++.|+++ |++|++.+|+..... .+.+. ......+..+.+|++|.++++.++.
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~-~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQIS-SQTGNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHH-HhcCCceEEEEecccChHHHHHHhhhhhh
Confidence 45699999999999999999999999 789999998652211 00110 1124568899999999999876652
Q ss_pred -cCCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCCCC
Q 005818 79 -TEKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVGNH 149 (676)
Q Consensus 79 -~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 149 (676)
..++|++||+|+...... ..+++...+..|..+...+...+. .......++.+||.........
T Consensus 100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~------- 172 (294)
T d1w6ua_ 100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF------- 172 (294)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-------
T ss_pred hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc-------
Confidence 247999999999875432 223455667778887777665432 2222456777777543322221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCC-ChHHHHHHHHHCCCCceeecCCCceEe
Q 005818 150 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMKGKPLPIHGDGSNVRS 225 (676)
Q Consensus 150 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (676)
...|+.+|...+.+++.++.++ |+++.++.||.|-.+..... .-.....+.....-+.. .
T Consensus 173 -------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R 236 (294)
T d1w6ua_ 173 -------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------R 236 (294)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------S
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------C
Confidence 3359999999999999887764 89999999999976643110 11112233333332221 2
Q ss_pred eeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 226 YLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 226 ~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
+...+|+|.++..++... -.|+++.+.+|..
T Consensus 237 ~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 237 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEE 270 (294)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence 566799999999998542 2688899988853
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.52 E-value=7.6e-14 Score=132.85 Aligned_cols=192 Identities=17% Similarity=0.139 Sum_probs=137.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++
T Consensus 5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (251)
T d1vl8a_ 5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKL 84 (251)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999754 56789999999998888765 78
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|++||+||.... |-.+...++.+..+++|+.++..+.+++... +.++|+++|......
T Consensus 85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~---------------- 148 (251)
T d1vl8a_ 85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------------- 148 (251)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc----------------
Confidence 999999996521 1112234555678999999999999987553 358888887543210
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchhhHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
+......|+.+|...+.+.+.+. ...++|+-.+-|+.+..+. .....+....+ . +-+...+|+|
T Consensus 149 -~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p---l-~R~~~pedvA 223 (251)
T d1vl8a_ 149 -TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP---L-GRTGVPEDLK 223 (251)
T ss_dssp -CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT---T-SSCBCGGGGH
T ss_pred -cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCC---C-CCCCCHHHHH
Confidence 11223679999999999998863 2457999999999887552 12222222211 1 2355689999
Q ss_pred HHHHHHHhcC---CCc-eeEccCC
Q 005818 577 PISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 577 ~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
++++.++... .+| ++.+.+|
T Consensus 224 ~~v~fL~S~~a~~itG~~i~vDGG 247 (251)
T d1vl8a_ 224 GVAVFLASEEAKYVTGQIIFVDGG 247 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhCCCcCcEEEeCcC
Confidence 9999988543 234 6776655
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.52 E-value=8.7e-14 Score=131.62 Aligned_cols=192 Identities=14% Similarity=0.075 Sum_probs=138.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECcc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAG 441 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~ 441 (676)
+.|+++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++||+||
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 34789999999999999999999999865 67789999999999999876 7899999999
Q ss_pred ccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----c--CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 442 VTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----N--GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 442 ~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~--~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
.... |-.....++.+..+++|+.++..+.+++.+ . +.++|++||...+. +.+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------------~~~~~~ 145 (242)
T d1cyda_ 84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------------------TFPNLI 145 (242)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBH
T ss_pred cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------------------cCCccc
Confidence 6531 111223445567799999999999887643 1 24778877764331 122236
Q ss_pred chhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
.|+.+|...+.+.+.+. ...++|+-.+-|+.+..|. .+...+....+ . +-+...+|++++++.++
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p---l-~R~~~peeva~~v~fL~ 221 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---L-RKFAEVEDVVNSILFLL 221 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---T-SSCBCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCC---C-CCCcCHHHHHHHHHHHh
Confidence 79999999999998863 3467999999999987653 12222222111 1 23567899999999988
Q ss_pred hcC---CCc-eeEccCC
Q 005818 584 KRN---LSG-IWNFTNP 596 (676)
Q Consensus 584 ~~~---~~g-~yn~~~~ 596 (676)
... .+| ++.+.+|
T Consensus 222 S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 222 SDRSASTSGGGILVDAG 238 (242)
T ss_dssp SGGGTTCCSSEEEESTT
T ss_pred CchhcCcCCceEEeCcc
Confidence 543 234 6776665
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=1.3e-13 Score=130.44 Aligned_cols=201 Identities=14% Similarity=0.152 Sum_probs=138.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHH-------Hc
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFI-------LL 78 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~-------~~ 78 (676)
++|+||||||+|.||+++++.|+++ +++|+++++..... ......+..|..+.+..+.+ +.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 78999888754211 12233445566555554332 22
Q ss_pred cCCCCEEEEccccCCc-----CCcCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCC
Q 005818 79 TEKIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEAS 152 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 152 (676)
..++|++||+||.... ....+++...++.|+.++.++.+++..+ .+-.++|++||...+.+...
T Consensus 69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~---------- 138 (236)
T d1dhra_ 69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG---------- 138 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC----------
Confidence 3468999999986432 1223445678899999999988877642 22358999999766544332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeee
Q 005818 153 QLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYL 227 (676)
Q Consensus 153 ~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (676)
...|+.+|...+.+.+.++.+ .|+++..+.||.+..+. .+....... ...++
T Consensus 139 ----~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~----------~~~~~~~~~---------~~~~~ 195 (236)
T d1dhra_ 139 ----MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------NRKSMPEAD---------FSSWT 195 (236)
T ss_dssp ----BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------HHHHSTTSC---------GGGSE
T ss_pred ----CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc----------chhhCccch---------hhcCC
Confidence 246999999999999998765 36999999999986532 122211111 11467
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEE
Q 005818 228 YCEDVAEAFDTILHKG---EVGHVYNI 251 (676)
Q Consensus 228 ~v~D~a~ai~~~~~~~---~~~~~y~i 251 (676)
..+++++.+..++... ..|+.+.+
T Consensus 196 ~pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 196 PLEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp EHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred CHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 7899999999988643 24555554
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.52 E-value=5.6e-14 Score=133.52 Aligned_cols=196 Identities=13% Similarity=0.051 Sum_probs=134.7
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34689999999999999999999999754 67889999999998887655 7899
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||...... .+...++.+..+++|+.++..+.+++.. . +.++|++||..... +
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------------------~ 145 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL------------------K 145 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------------------C
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc------------------c
Confidence 999999753111 1223455668899999999999987744 2 35888888875431 1
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH---HHHHHHhcC-ceeccCCCccchhhHHHHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN---FITKISRYN-KVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~---~~~~~~~~~-~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
.+....|+.||...+.+.+.+. ...++|+..+.|+.+..+.. ......... .......-+...+|+|++++.+
T Consensus 146 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL 225 (247)
T d2ew8a1 146 IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFL 225 (247)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHH
T ss_pred CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 2233679999999999988864 24579999999998875521 100000000 0000111345679999999998
Q ss_pred HhcC---CCc-eeEccCC
Q 005818 583 AKRN---LSG-IWNFTNP 596 (676)
Q Consensus 583 ~~~~---~~g-~yn~~~~ 596 (676)
+... .+| ++.+.+|
T Consensus 226 ~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 226 ASDDASFITGQTLAVDGG 243 (247)
T ss_dssp TSGGGTTCCSCEEEESSS
T ss_pred hCchhcCCcCCeEEECCC
Confidence 8543 234 6776655
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.4e-13 Score=131.59 Aligned_cols=218 Identities=20% Similarity=0.205 Sum_probs=146.6
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc-----
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----- 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----- 78 (676)
+.++|++|||||++.||.++++.|+++ |++|++.+|+..... .. ............+|+.+.+.++....
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~--~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGE--AQ-AKKLGNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHH--HH-HHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHH--HH-HHHhCCCcccccccccccccccccccccccc
Confidence 367899999999999999999999999 688999988653211 11 11124567889999999877655442
Q ss_pred cCCCCEEEEccccCCcC----------CcCCChHHHHHHHHHHHHHHHHHHHHc---------CCCceEEEEecccccCC
Q 005818 79 TEKIDTIMHFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKIT---------GQIKRFIHVSTDEVYGE 139 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~----------~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~~v~~SS~~vyg~ 139 (676)
....|.+++.++..... ...+++...+++|+.++.++.+++... .+-.++|++||...+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 24688988887664321 123456688999999999999887542 01237999999766533
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCcee
Q 005818 140 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPI 216 (676)
Q Consensus 140 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 216 (676)
..+ ...|+.+|...+.+.+.++.++ |+++..+.||.+..+... .+........... +++
T Consensus 157 ~~~--------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~--~pl 218 (248)
T d2o23a1 157 QVG--------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT--SLPEKVCNFLASQ--VPF 218 (248)
T ss_dssp CTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHT--CSS
T ss_pred CCC--------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh--cCCHHHHHHHHhc--CCC
Confidence 222 3469999999999999988764 799999999999766431 1222222222222 111
Q ss_pred ecCCCceEeeeeHHHHHHHHHHHHhcCC-CCceEE
Q 005818 217 HGDGSNVRSYLYCEDVAEAFDTILHKGE-VGHVYN 250 (676)
Q Consensus 217 ~~~~~~~~~~v~v~D~a~ai~~~~~~~~-~~~~y~ 250 (676)
.+ .+...+|+|.+++++++..- .|++.+
T Consensus 219 ~~------R~g~peevA~~v~fL~s~~~itGq~I~ 247 (248)
T d2o23a1 219 PS------RLGDPAEYAHLVQAIIENPFLNGEVIR 247 (248)
T ss_dssp SC------SCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred CC------CCcCHHHHHHHHHHHHhCCCCCceEeE
Confidence 11 25678999999999887432 355544
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.51 E-value=3.6e-14 Score=134.99 Aligned_cols=194 Identities=12% Similarity=0.047 Sum_probs=139.6
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+.++++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 34689999999999999999999999765 67889999999999888765 78999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
||+||...... .+...++....+++|+.++..+.+++.. . +.++|++||...+. +.
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~------------------~~ 145 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------------------GL 145 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CC
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc------------------cc
Confidence 99999753111 1223345557799999999999998743 2 46889998875431 12
Q ss_pred CCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCce-----eccCCCc-cchhhHHHHHHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKV-----VNIPNSM-TILDELLPISVE 581 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~-----~~~~~~~-~~v~D~a~~~~~ 581 (676)
.....|+.||...+.+.+.+. ...++|+-.+-|+.+..+. .......... ...+ -+ +-.+|+|.+++.
T Consensus 146 ~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~--~~~~~~~~~~~~~~~~pl~-R~g~~PedvA~~v~f 222 (254)
T d1hdca_ 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM--TAETGIRQGEGNYPNTPMG-RVGNEPGEIAGAVVK 222 (254)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--HHHHTCCCSTTSCTTSTTS-SCB-CHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc--chhcCHHHHHHHHhCCCCC-CCCCCHHHHHHHHHH
Confidence 234679999999999998864 3468999999999987652 2222211110 0111 12 246899999999
Q ss_pred HHhcC---CCc-eeEccCCC
Q 005818 582 MAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 582 ~~~~~---~~g-~yn~~~~~ 597 (676)
++... .+| ++.+.+|-
T Consensus 223 L~S~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 223 LLSDTSSYVTGAELAVDGGW 242 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HhchhhCCCCCceEEeCCCc
Confidence 88543 234 77777763
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.51 E-value=5.6e-14 Score=134.97 Aligned_cols=196 Identities=14% Similarity=0.082 Sum_probs=136.4
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
+.++++||||++.||+++++.|+++|++| .++.+|++|+++++++++.+
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 44689999999999999999999999754 56789999999999888765
Q ss_pred CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 432 KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
++|++||+||...... .+...++....+++|+.++..+.+++.. . +.++|++||...+.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--------------- 147 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------- 147 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee---------------
Confidence 7899999999753211 1223455567899999999998887643 2 35888998875441
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcCc---------ee---ccCCC
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK---------VV---NIPNS 568 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~---------~~---~~~~~ 568 (676)
+.+....|+.||...+.+.+.+. ...++++..+.|+.+.-|. ..+........ .. ...+-
T Consensus 148 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R 224 (260)
T d1x1ta1 148 ---ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ 224 (260)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCC
T ss_pred ---ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCC
Confidence 12234679999999999998863 3468999999999887652 12111111100 00 00113
Q ss_pred ccchhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 569 MTILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+...+|+|.++++++... .+| ++++.+|
T Consensus 225 ~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 225 FVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 557899999999988543 234 6776665
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.3e-13 Score=130.76 Aligned_cols=192 Identities=12% Similarity=0.084 Sum_probs=139.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------eeccccCCChHHHHHHhhcc-CCCEEEECcc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAG 441 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~ 441 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++||+||
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg 85 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence 45799999999999999999999999865 56789999999999998876 7899999999
Q ss_pred ccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHHc------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCC
Q 005818 442 VTGRP-NVDWCETHKPETIRTNVVGTLTLADVCREN------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGS 514 (676)
Q Consensus 442 ~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~ 514 (676)
..... -.+...++....+++|+.++..+.+++.+. +.+++++||...+. +.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------------~~~~~~ 147 (244)
T d1pr9a_ 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------------AVTNHS 147 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBH
T ss_pred cccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc------------------cccchh
Confidence 65311 112234555678999999999988876431 24778888765431 122346
Q ss_pred chhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 515 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 515 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
.|+.||...+.+.+.+. ...++|+..+.|+.+.-+. .....+....+ . +-+...+|+|.+++.++
T Consensus 148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p---l-~R~~~peevA~~v~fL~ 223 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---L-GKFAEVEHVVNAILFLL 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCT---T-CSCBCHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCC---C-CCCcCHHHHHHHHHHHh
Confidence 79999999999998863 2458999999999987653 12222222111 1 24667899999999988
Q ss_pred hcC---CCc-eeEccCC
Q 005818 584 KRN---LSG-IWNFTNP 596 (676)
Q Consensus 584 ~~~---~~g-~yn~~~~ 596 (676)
... .+| ++.+.+|
T Consensus 224 S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 224 SDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CchhCCcCCcEEEECcc
Confidence 543 234 6666554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.51 E-value=1.4e-13 Score=130.97 Aligned_cols=196 Identities=13% Similarity=0.082 Sum_probs=138.2
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+.++++||||++.||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 345799999999999999999999999754 67889999999998887765 78
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc----C--CcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN----G--LLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|++||+||.... +-.+...++....+++|+.++..+.+++... + .++|++||...+.
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~---------------- 147 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV---------------- 147 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----------------
Confidence 999999997531 1112233445578999999999999987542 2 3677887764331
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChHH--HH--HHHHhcCceeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRN--FI--TKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~--~~--~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
+.+....|+.+|...+.+.+.+. ..+++|+..+-|+.+..+.. +. ............ +-+...+|+|.
T Consensus 148 --~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~ 224 (251)
T d1zk4a1 148 --GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM-GHIGEPNDIAY 224 (251)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT-SSCBCHHHHHH
T ss_pred --cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC-CCCcCHHHHHH
Confidence 11223679999999998887642 35689999999999876531 00 111111111111 23567899999
Q ss_pred HHHHHHhcC---CCc-eeEccCC
Q 005818 578 ISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 578 ~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+++.++... .+| ++.+.+|
T Consensus 225 ~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 225 ICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhCCCcCcEEEECcc
Confidence 999988543 235 6776654
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.51 E-value=9.6e-14 Score=132.69 Aligned_cols=198 Identities=14% Similarity=0.139 Sum_probs=140.6
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 34689999999999999999999999754 56789999999998887765
Q ss_pred CCCEEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 KPTHVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|++||+||..+. |-.+...++.+..+++|+.++..+.+++.. .+.++|++||...+.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------- 148 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------- 148 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--------------
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc--------------
Confidence 68999999996521 111223455667899999999999987733 246889998875431
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcCc------ee--ccCCCccc
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK------VV--NIPNSMTI 571 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------~~--~~~~~~~~ 571 (676)
+.+....|+.||...+.+.+.+. ..+++|+..+-|+.+.-|. ..+........ .. ....-+..
T Consensus 149 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ 224 (258)
T d1iy8a_ 149 ----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE 224 (258)
T ss_dssp ----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcC
Confidence 11234679999999999988863 3457999999999988663 12111110000 00 00123557
Q ss_pred hhhHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 572 LDELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
.+|+|.+++.++... .+| ++.+.+|..
T Consensus 225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 225 APEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 899999999988543 334 777777654
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.51 E-value=1.3e-13 Score=131.78 Aligned_cols=198 Identities=16% Similarity=0.148 Sum_probs=140.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 34689999999999999999999999755 66789999999999888765 78999
Q ss_pred EECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH------cCCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE------NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~------~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+||.... |..+...++....+++|+.|+..+.+++.. .+.++|++||...+. +
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------------~ 145 (256)
T d1k2wa_ 84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------------------G 145 (256)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------C
T ss_pred EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------------------c
Confidence 999996531 112223455567799999999999886533 135788888865431 2
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcCc------------eeccCCCccch
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK------------VVNIPNSMTIL 572 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------------~~~~~~~~~~v 572 (676)
......|+.||...+.+.+.+. ...++|+..+.|+.+..|. ........... ..+. +-+...
T Consensus 146 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~p 224 (256)
T d1k2wa_ 146 EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRA 224 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCH
T ss_pred cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC-CCCcCH
Confidence 2234679999999999998863 3468999999999888763 11111111000 0011 235678
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCCCcc
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNPGVV 599 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~~~~ 599 (676)
+|+|.+++.++... .+| ++.+.+|..+
T Consensus 225 ~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m 255 (256)
T d1k2wa_ 225 EDLTGMAIFLATPEADYIVAQTYNVDGGNWM 255 (256)
T ss_dssp HHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence 99999999987543 234 7777776544
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.50 E-value=1e-13 Score=132.39 Aligned_cols=174 Identities=12% Similarity=0.072 Sum_probs=124.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcC-CCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHcc-----
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNY-PEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLT----- 79 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~----- 79 (676)
||+||||||++.||.++++.|++.. .+++|++.+|...... .+.. .....++.++.+|++|+++++++++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK--ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH--HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH--HHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 5799999999999999999998632 3789999988753221 1110 11245799999999999988776531
Q ss_pred --CCCCEEEEccccCCcC-----CcCCChHHHHHHHHHHHHHHHHHHHHc--------------CCCceEEEEeccccc-
Q 005818 80 --EKIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKIT--------------GQIKRFIHVSTDEVY- 137 (676)
Q Consensus 80 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~--------------~~~~~~v~~SS~~vy- 137 (676)
.++|++||+||..... ...+++...+++|+.|+..+.+++... ..-.++|++||....
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 3699999999985432 233345678999999999888766321 013589999995422
Q ss_pred CCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCC
Q 005818 138 GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN 194 (676)
Q Consensus 138 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~ 194 (676)
+... ......|+.||.....+.+.++.++ |+++..+.||.|--+.
T Consensus 160 ~~~~------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 160 QGNT------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp TTCC------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred CCCC------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 1111 1123469999999999988876653 7999999999986553
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.50 E-value=1.1e-13 Score=131.90 Aligned_cols=191 Identities=15% Similarity=0.136 Sum_probs=138.9
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
.+.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD 89 (251)
T d2c07a1 10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 89 (251)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCce
Confidence 3689999999999999999999999754 67889999999999888765 789
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
++||+|+...... .+...++....+++|+.++..+.+++.. . +.++|++||...+.
T Consensus 90 ilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------------------ 151 (251)
T d2c07a1 90 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT------------------ 151 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------------------
T ss_pred eeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC------------------
Confidence 9999999653111 1223355667899999999999887643 2 36899999876442
Q ss_pred CCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPIS 579 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 579 (676)
+......|+.||...+.+.+.+. ...++|+..+.|+.+..+. .+...+....+ . +-+...+|+|.++
T Consensus 152 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~p---l-~R~~~pedvA~~v 227 (251)
T d2c07a1 152 GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIP---A-GRMGTPEEVANLA 227 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCT---T-SSCBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCC---C-CCCcCHHHHHHHH
Confidence 11233679999999999998863 3468999999999987653 22222322211 1 2356789999999
Q ss_pred HHHHhcC---CCc-eeEccCC
Q 005818 580 VEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 580 ~~~~~~~---~~g-~yn~~~~ 596 (676)
+.++... .+| ++.+.+|
T Consensus 228 ~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 228 CFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhCCCcCcEEEECCC
Confidence 9988543 234 6666654
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.49 E-value=2e-13 Score=130.52 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=137.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+.++++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ +
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34689999999999999999999999754 57889999999998888765 7
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|++||+||.... +..+...++....+++|+.++..+.+++.. .+ ..++++||.....
T Consensus 86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--------------- 150 (261)
T d1geea_ 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------- 150 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------------
T ss_pred CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc---------------
Confidence 8999999997531 112223455567799999999999887644 23 3466677754321
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--------HHHHHHhcCceeccCCCccchhh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTILDE 574 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D 574 (676)
+.+....|+.||...+.+.+.+. ...++|+..+-|+.+.-|.. ....+... ... +-+...+|
T Consensus 151 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~---~pl-~R~~~ped 223 (261)
T d1geea_ 151 ---PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM---IPM-GYIGEPEE 223 (261)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT---CTT-SSCBCHHH
T ss_pred ---cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhc---CCC-CCCCCHHH
Confidence 22234679999999999998863 34589999999999886631 11111111 111 23557899
Q ss_pred HHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 575 LLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 575 ~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
+|++++.++... .+| ++.+.+|..
T Consensus 224 iA~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 224 IAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhcCCcCCeEEECCCee
Confidence 999999988543 234 777777654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.49 E-value=6e-14 Score=133.73 Aligned_cols=195 Identities=14% Similarity=0.089 Sum_probs=139.3
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.+.++++||||++.||+++++.|+++|++| .++++|++|+++++++++.+ ++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 345789999999999999999999999865 67789999999988887766 7899
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+||+||...... .+...++.+..+++|+.++..+.+++.. .+.++|++||...+. +.
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~------------------~~ 145 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL------------------PI 145 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------------CC
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc------------------Cc
Confidence 999999653111 1223455667899999999998887754 356889998865431 22
Q ss_pred CCCCchhhhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcC---------ceeccCCCccchhhHH
Q 005818 511 FTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYN---------KVVNIPNSMTILDELL 576 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~v~D~a 576 (676)
.....|+.||...+.+.+.+.. .+++|+..+-|+.+..+. ........ ......+.+...+|+|
T Consensus 146 ~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA 223 (253)
T d1hxha_ 146 EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM--MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA 223 (253)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH--HHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh--HHhhCcchhhHHHHHhCccccccCCCCCHHHHH
Confidence 2346799999999999887532 256999999999887653 22211111 1111122456789999
Q ss_pred HHHHHHHhcC---CCc-eeEccCC
Q 005818 577 PISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 577 ~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
++++.++... .+| ++++.+|
T Consensus 224 ~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 224 QLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HHHHHHhChhhCCCcCcEEEECcc
Confidence 9999988543 234 6776554
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.49 E-value=1.5e-13 Score=132.56 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=139.1
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.+.++++||||++.||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 345789999999999999999999999765 56789999999999888655 78
Q ss_pred CEEEECccccCCCC---cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 434 THVFNAAGVTGRPN---VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 434 d~Vih~a~~~~~~~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
|++||+||..+... .+...++.+..+++|+.++..+.+++.+. +.+++++||...+..
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~-------------- 149 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA-------------- 149 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC--------------
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc--------------
Confidence 99999999653111 11223455677899999999999877542 247888887654311
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH---------HHHHHHHhcCceeccCCCccchh
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR---------NFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
.......|+.||...+.+.+.+. ...++|+..+.|+.+..|. ........... ...+-+...+
T Consensus 150 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~gr~~~pe 224 (268)
T d2bgka1 150 ---GEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA--NLKGTLLRAE 224 (268)
T ss_dssp ---CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC--SSCSCCCCHH
T ss_pred ---ccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc--ccCCCCcCHH
Confidence 01112469999999999998863 3468999999998876542 11222221111 1122466789
Q ss_pred hHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 574 ELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
|+|++++.++... .+| ++.+.+|-.
T Consensus 225 dvA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 225 DVADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhChhhCCccCceEEECcCcc
Confidence 9999999988543 234 777777643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.48 E-value=2.9e-13 Score=129.67 Aligned_cols=193 Identities=16% Similarity=0.136 Sum_probs=137.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
|.++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++|+
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 82 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999754 67889999999998887765 6899
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH------cC-CcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE------NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~------~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+||+||...... .+...++....+++|+.++..+.+++.. .+ .+++++||...+.
T Consensus 83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~----------------- 145 (257)
T d2rhca1 83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----------------- 145 (257)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS-----------------
T ss_pred EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc-----------------
Confidence 999999753111 2223455668899999999999998754 23 4677777765431
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhcCc------------eeccCCCcc
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK------------VVNIPNSMT 570 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------------~~~~~~~~~ 570 (676)
+.+....|+.||...+.+.+.+. ...++|+..+-|+.+.-|. .+......... ..+. +-+.
T Consensus 146 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-gR~~ 223 (257)
T d2rhca1 146 -GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYV 223 (257)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCB
T ss_pred -ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-CCCc
Confidence 12234679999999999998863 3468999999999987653 11111111000 0111 2356
Q ss_pred chhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 571 ILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
..+|+|++++.++... .+| ++.+.+|
T Consensus 224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 7899999999988543 234 6666654
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.48 E-value=1.6e-13 Score=131.51 Aligned_cols=192 Identities=15% Similarity=0.127 Sum_probs=137.3
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
.+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ +
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 345789999999999999999999999754 67889999999988888765 7
Q ss_pred CCEEEECccccC--CCCcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 433 PTHVFNAAGVTG--RPNVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 433 ~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
+|++||+||..+ .|-.+...++....+++|+.++..+.+++.. .+.++|++||...+.
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--------------- 147 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--------------- 147 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS---------------
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc---------------
Confidence 899999999652 1112233455567889999999999888743 235889998875442
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HH--------------------HHHHhcC
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FI--------------------TKISRYN 560 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~--------------------~~~~~~~ 560 (676)
+.+....|+.||...+.+.+.+. ...++|+..+-|+.+.-+.. .. ..+...-
T Consensus 148 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 148 ---GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 11223579999999999998863 34589999999999876531 11 1111110
Q ss_pred ceeccCCCccchhhHHHHHHHHHhcC---CCc-eeEccC
Q 005818 561 KVVNIPNSMTILDELLPISVEMAKRN---LSG-IWNFTN 595 (676)
Q Consensus 561 ~~~~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~ 595 (676)
+ . .-+...+|+|.+++.++... .+| ++.+.+
T Consensus 225 P---l-~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 225 P---M-RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp T---T-SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred C---C-CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 0 1 13556899999999988643 234 565544
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.48 E-value=4e-13 Score=128.49 Aligned_cols=192 Identities=15% Similarity=0.066 Sum_probs=137.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc------C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV------K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~------~ 432 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ +
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999755 56789999999888776543 5
Q ss_pred CCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|++||+||...... .+...++.+..+++|+.++..+.+++... +.++|++||.....
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------------- 150 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------------- 150 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----------------
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----------------
Confidence 899999999653111 22234555678999999999998877542 35788988865331
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-----------HHHHHHHhcCceeccCCCccch
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-----------NFITKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~v 572 (676)
+.+....|+.+|...+.+.+.+. ...++|+..+-|+.+.-+. ..+.++....+ . +-+...
T Consensus 151 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p---l-~R~g~p 224 (259)
T d2ae2a_ 151 --AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---L-RRMGEP 224 (259)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---T-CSCBCH
T ss_pred --ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC---C-CCCcCH
Confidence 12234679999999999998863 3468999999999987653 11222222111 1 235568
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+|+|.+++.++... .+| ++.+.+|
T Consensus 225 edvA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 225 KELAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 99999999988543 234 6666654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.48 E-value=2e-13 Score=129.30 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=137.7
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.|+||||++.||++++++|+++|++| ..+++|++|+++++++++.+ ++|+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 69999999999999999999999754 56789999999998887765 7899
Q ss_pred EEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 436 VFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 436 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
+||+||..... -.+...++.+..+++|+.++..+.+++.. .+.++|++||...+. +
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------------------~ 144 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI------------------G 144 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------------------C
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC------------------C
Confidence 99999965311 12223455667899999999999887744 246899999876542 1
Q ss_pred CCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 510 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
......|+.||...+.+.+.+.. .+++|+..+-|+.+.-+. .+...+....+ . +-+...+|+|+++.
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~p---l-~R~~~p~dvA~~v~ 220 (244)
T d1edoa_ 145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIP---L-GRTGQPENVAGLVE 220 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCT---T-CSCBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCC---C-CCCcCHHHHHHHHH
Confidence 12336799999999999988642 358999999999887653 12222222111 1 23557899999999
Q ss_pred HHHhcC----CCc-eeEccCC
Q 005818 581 EMAKRN----LSG-IWNFTNP 596 (676)
Q Consensus 581 ~~~~~~----~~g-~yn~~~~ 596 (676)
+++.++ .+| ++.+.+|
T Consensus 221 fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 221 FLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHCSGGGGCCSCEEEESTT
T ss_pred HHHCCchhcCCcCCeEEeCCC
Confidence 986443 234 6666655
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=5.8e-14 Score=134.22 Aligned_cols=190 Identities=15% Similarity=0.167 Sum_probs=136.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ +
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999754 56789999999998888765 6
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|++||+||.. . ..+.+..+++|+.++.++..++... +.++|++||...+.
T Consensus 83 iDilVnnAg~~---~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~-------------- 141 (254)
T d2gdza1 83 LDILVNNAGVN---N----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-------------- 141 (254)
T ss_dssp CCEEEECCCCC---C----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred cCeeccccccc---c----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc--------------
Confidence 89999999976 2 3456688999999999888877542 13588888865431
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHH--cc---CeEEEEeeecccCCCCChHHHHHHHHhc------Cc-------eeccC
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKE--YD---NVCTLRVRMPISSDLNNPRNFITKISRY------NK-------VVNIP 566 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~--~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~------~~-------~~~~~ 566 (676)
+.+....|+.||...+.+.+. +. ...++|+..+.|+.+.-|. +..+... .. ....
T Consensus 142 ----~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~~~p~- 214 (254)
T d2gdza1 142 ----PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI--LESIEKEENMGQYIEYKDHIKDMIKY- 214 (254)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH--HHGGGCHHHHGGGGGGHHHHHHHHHH-
T ss_pred ----CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh--hhhccccccccccHHHHHHHHhcCCC-
Confidence 222346799999999988764 21 2468999999999887542 1111100 00 0000
Q ss_pred CCccchhhHHHHHHHHHhcC-CC-ceeEccCCCcccH
Q 005818 567 NSMTILDELLPISVEMAKRN-LS-GIWNFTNPGVVSH 601 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~-~~-g~yn~~~~~~~s~ 601 (676)
.-+...+|+|++++.++..+ .+ .++.+.++..+.+
T Consensus 215 ~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~ 251 (254)
T d2gdza1 215 YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHF 251 (254)
T ss_dssp HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEE
T ss_pred CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeec
Confidence 12456789999999998765 23 4778877765543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.47 E-value=3.4e-13 Score=128.85 Aligned_cols=193 Identities=16% Similarity=0.129 Sum_probs=134.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
.++||||++.||+++++.|+++|++| ..+++|++|+++++++++.+ ++|++
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 82 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 46999999999999999999999754 56789999999998887765 78999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC--CcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
||+||...... .+...++.+..+++|+.|+..+.+++.. .+ .+++++||...+. +
T Consensus 83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------------~ 144 (255)
T d1gega_ 83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------------G 144 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------C
T ss_pred EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc------------------c
Confidence 99999652111 1223344567899999999999887643 22 4567777654331 2
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HHHHHHHhc--Cc----------eeccCCCccch
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRY--NK----------VVNIPNSMTIL 572 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~--~~----------~~~~~~~~~~v 572 (676)
.+....|+.||...+.+.+.+. ...++|+..+.|+.+.-|. .+....... .. .... +-+...
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~p 223 (255)
T d1gega_ 145 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEP 223 (255)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCH
T ss_pred CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC-CCCcCH
Confidence 2234679999999999998863 3468999999999987663 111111110 00 0011 135678
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
+|+|++++.++... .+| ++.+.+|-
T Consensus 224 eevA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 224 EDVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 99999999988543 234 67766653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=4.5e-13 Score=128.96 Aligned_cols=227 Identities=15% Similarity=0.070 Sum_probs=152.2
Q ss_pred CCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc---
Q 005818 4 VYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL--- 78 (676)
Q Consensus 4 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~--- 78 (676)
++++|+||||||+| .||+++++.|+++ |++|++.+|+........ ...........+..|+.+..+....+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVE-EFAAQLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHH-HHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH-HHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence 46789999999999 7999999999999 788888888642111000 001123356788899999887666552
Q ss_pred --cCCCCEEEEccccCCcCC---------cCCChHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCC
Q 005818 79 --TEKIDTIMHFAAQTHVDN---------SFGNSFEFTKNNIYGTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 79 --~~~~d~Vih~a~~~~~~~---------~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
...+|++||.|+...... ..+.+...+..|+.+...+.+++...- +-..+|++||.....+..
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~----- 153 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 153 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC-----
Confidence 236899999998764322 111233466777888888887776532 235688888865432211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
....|+.+|...+.+++.++.+. |+++..+.||.|..+...................++.
T Consensus 154 ---------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~-------- 216 (258)
T d1qsga_ 154 ---------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR-------- 216 (258)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--------
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC--------
Confidence 13569999999999999888775 7999999999998775432222223333333222211
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
.+...+|++.++.+++... -.|+++.+.+|-+
T Consensus 217 -R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 217 -RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp -SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred -CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 2567899999999998542 2678898888754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.46 E-value=1.9e-13 Score=129.11 Aligned_cols=177 Identities=15% Similarity=0.109 Sum_probs=128.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCc-------e------------------------eeccccCCChHHHHHHhhcc---
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIP-------F------------------------EYGKGRLENRSQLLADIQNV--- 431 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~-------v------------------------~~~~~Dl~d~~~~~~~~~~~--- 431 (676)
.|+||||++.||+++++.|+++|++ | ..+.+|++|+++++++++.+
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999975 2 56789999999988887765
Q ss_pred --CCCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 432 --KPTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 432 --~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
++|++||+||...... .+...++.+..+++|+.|+..+.+++.. . +.++|++||...+.
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------- 149 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------------- 149 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC-------------
Confidence 6899999999652111 1223455567899999999998887754 2 45889998875441
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
+.+....|+.||...+.+.+.+. ...++|+..+.|+.+.-+. ... ........+...+|+|++++
T Consensus 150 -----~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~------~~~-~~~~~~~~~~~PedvA~~v~ 217 (240)
T d2bd0a1 150 -----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM------WGK-VDDEMQALMMMPEDIAAPVV 217 (240)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT------TCC-CCSTTGGGSBCHHHHHHHHH
T ss_pred -----CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch------hhh-cCHhhHhcCCCHHHHHHHHH
Confidence 12234679999999998888853 3468999999999887541 100 00001113445799999999
Q ss_pred HHHhcCC
Q 005818 581 EMAKRNL 587 (676)
Q Consensus 581 ~~~~~~~ 587 (676)
.++..+.
T Consensus 218 ~l~s~~~ 224 (240)
T d2bd0a1 218 QAYLQPS 224 (240)
T ss_dssp HHHTSCT
T ss_pred HHHcCCc
Confidence 9987653
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.46 E-value=1.9e-13 Score=130.61 Aligned_cols=193 Identities=15% Similarity=0.119 Sum_probs=127.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc------CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV------KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~------~~ 433 (676)
.++++||||++.||.++++.|+++|++| ..+.+|++|+++++++++.+ ++
T Consensus 8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~i 87 (259)
T d1xq1a_ 8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 87 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCc
Confidence 4689999999999999999999999754 66789999999888776543 58
Q ss_pred CEEEECccccC-CCCcchhccchhhHHhhhhhhHHHHHHHHHH----c-CCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 434 THVFNAAGVTG-RPNVDWCETHKPETIRTNVVGTLTLADVCRE----N-GLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 434 d~Vih~a~~~~-~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
|++||+||... .|..+...++.+..+++|+.++..+.+++.. . +.++|++||.....
T Consensus 88 dilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----------------- 150 (259)
T d1xq1a_ 88 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV----------------- 150 (259)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred ccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-----------------
Confidence 99999999652 1112233455667899999999999887743 2 36889998875442
Q ss_pred CCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc------eeccCCCccchhhHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK------VVNIPNSMTILDELLPI 578 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~v~D~a~~ 578 (676)
+......|+.+|...+.+.+.+. ...++|+-.+-|+.+.-|. ......... .... .-+...+|+|.+
T Consensus 151 -~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~--~~~~~~~~~~~~~~~~~pl-~R~~~pedvA~~ 226 (259)
T d1xq1a_ 151 -SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL--AEAVYDDEFKKVVISRKPL-GRFGEPEEVSSL 226 (259)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHH
T ss_pred -cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH--hhhhchHHHHHHHHhCCCC-CCCcCHHHHHHH
Confidence 11234679999999999998863 3467999999999887552 111111100 0011 134568999999
Q ss_pred HHHHHhcC---CCc-eeEccCCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~~ 597 (676)
++.++... .+| ++.+.+|-
T Consensus 227 v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 227 VAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp HHHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHHhCchhcCCcCcEEEeCCCE
Confidence 99988533 234 66666653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.45 E-value=7.7e-13 Score=124.97 Aligned_cols=199 Identities=14% Similarity=0.128 Sum_probs=133.9
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHH-------HccC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFI-------LLTE 80 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~-------~~~~ 80 (676)
.|||||||+|.||+++++.|+++ |++|++++|..... ......+.+|..+.+..... ++..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999 79999999864211 11233445666655443322 2335
Q ss_pred CCCEEEEccccCCcCC-----cCCChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcCCCCCCCCCC
Q 005818 81 KIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQL 154 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 154 (676)
++|++||+||...... ..+.++..++.|+.++..+.+++..+ .+-.++|++||...+.+...
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------ 138 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------------ 138 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc------------
Confidence 6899999999743221 12234467899999999888877653 11258999999766544332
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHc-----CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeH
Q 005818 155 LPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYC 229 (676)
Q Consensus 155 ~p~~~Y~~sK~~~E~~~~~~~~~~-----~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 229 (676)
...|+.+|...+.+.+.++.++ ++++..+.||.+-.+ +.+...... ....++..
T Consensus 139 --~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~----------~~~~~~~~~---------~~~~~~~~ 197 (235)
T d1ooea_ 139 --MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------MNRKWMPNA---------DHSSWTPL 197 (235)
T ss_dssp --BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH----------HHHHHSTTC---------CGGGCBCH
T ss_pred --ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc----------chhhhCcCC---------ccccCCCH
Confidence 2469999999999999987663 567788899987432 122222111 11246788
Q ss_pred HHHHHHHHHHHhcC----CCCceEEE
Q 005818 230 EDVAEAFDTILHKG----EVGHVYNI 251 (676)
Q Consensus 230 ~D~a~ai~~~~~~~----~~~~~y~i 251 (676)
+|+++.++..+..+ ..|..+.+
T Consensus 198 ~~va~~~~~~l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 198 SFISEHLLKWTTETSSRPSSGALLKI 223 (235)
T ss_dssp HHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred HHHHHHHHHHhcCccccCCCceEEEE
Confidence 99999987655432 24556666
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=6.4e-14 Score=136.04 Aligned_cols=184 Identities=14% Similarity=0.074 Sum_probs=124.7
Q ss_pred CCeE-EEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc--ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc----
Q 005818 7 PKNI-LITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN--LKNLNPSRLSPNFKFIKGDVASADLVHFILLT---- 79 (676)
Q Consensus 7 ~~~v-lVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~---- 79 (676)
+|+| |||||++.||.++++.|++++ +.+|++.+|...... .+.+ .....++.++++|++|.++++++++.
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l--~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQL--QAEGLSPRFHQLDIDDLQSIRALRDFLRKE 78 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHH--HHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence 4555 999999999999999999874 678999888653211 1111 11245689999999999998776532
Q ss_pred -CCCCEEEEccccCCcCCcC----CChHHHHHHHHHHHHHHHHHHHHc-CCCceEEEEecccccCCCCCCcC--------
Q 005818 80 -EKIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACKIT-GQIKRFIHVSTDEVYGETDEDAV-------- 145 (676)
Q Consensus 80 -~~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~-------- 145 (676)
.++|++||.||........ +++...+++|+.|+..+.+++... .+-.++|++||...+........
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence 3799999999987543322 245568899999999999887542 11248999999544321110000
Q ss_pred -------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-------cCCCEEEEeeCCccCC
Q 005818 146 -------------------VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-------YGLPVITTRGNNVYGP 193 (676)
Q Consensus 146 -------------------~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~l~~~ilR~~~i~G~ 193 (676)
.......+..|...|+.||.....+.+.++++ .++.+..+.||+|--+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~ 232 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence 00001122335567999999988877655443 2799999999998654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=4.9e-13 Score=130.31 Aligned_cols=197 Identities=12% Similarity=0.061 Sum_probs=135.3
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------------eeccccCCChHHHHHHhhcc-
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------------EYGKGRLENRSQLLADIQNV- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------------~~~~~Dl~d~~~~~~~~~~~- 431 (676)
.+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 345799999999999999999999999754 45779999999988887654
Q ss_pred ----CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCC
Q 005818 432 ----KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 432 ----~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
++|++||+|+.... +......++....+++|+.++..+.+++... +..+|++||+...
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~------------ 157 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------ 157 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc------------
Confidence 78999999996421 1122233455677999999999999887542 3455655443211
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH--HHH----HHHhcC-ceeccCCCccc
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FIT----KISRYN-KVVNIPNSMTI 571 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~----~~~~~~-~~~~~~~~~~~ 571 (676)
+.+....|+.+|...+.+.+.+. ...++|+-.+.|+.+..+.. ... ...... .... .+-+..
T Consensus 158 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~p-lgR~g~ 229 (297)
T d1yxma1 158 -------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP-AKRIGV 229 (297)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST-TSSCBC
T ss_pred -------cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCC-CCCCcC
Confidence 11223679999999999998863 34589999999998875531 000 000000 0001 123556
Q ss_pred hhhHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 572 LDELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
.+|+|.+++.++... .+| ++.+.+|..
T Consensus 230 pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 230 PEEVSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp THHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 899999999998543 234 778777644
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.43 E-value=1e-12 Score=126.73 Aligned_cols=198 Identities=12% Similarity=0.075 Sum_probs=135.3
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhcc---
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNV--- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~--- 431 (676)
.+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 345789999999999999999999999754 56789999999998888765
Q ss_pred --CCCEEEECccccCCCCcc-----hhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCee-eecCCCCCCCC
Q 005818 432 --KPTHVFNAAGVTGRPNVD-----WCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCI-FEYDAKHPEGT 499 (676)
Q Consensus 432 --~~d~Vih~a~~~~~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v-~~~~~~~~~~~ 499 (676)
++|++||+||........ ...++....+++|+.++..+.+++.. .+..+|+++|+.. ..
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~--------- 153 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ--------- 153 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS---------
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc---------
Confidence 789999999975211111 11123456789999999999887754 3456677766532 20
Q ss_pred CCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH------------HHHHHHhcCceec
Q 005818 500 GIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVN 564 (676)
Q Consensus 500 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~ 564 (676)
+......|+.+|...+.+.+.+. ..+++|+..+-|+.+.-+.. +............
T Consensus 154 ---------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P 224 (272)
T d1xkqa_ 154 ---------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP 224 (272)
T ss_dssp ---------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT
T ss_pred ---------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC
Confidence 11223679999999999998864 23579999999998865420 1111111111112
Q ss_pred cCCCccchhhHHHHHHHHHhc---C-CCc-eeEccCCCc
Q 005818 565 IPNSMTILDELLPISVEMAKR---N-LSG-IWNFTNPGV 598 (676)
Q Consensus 565 ~~~~~~~v~D~a~~~~~~~~~---~-~~g-~yn~~~~~~ 598 (676)
.+ -+...+|+|++++.++.. . .+| ++.+.+|..
T Consensus 225 lg-R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~ 262 (272)
T d1xkqa_ 225 IG-AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 262 (272)
T ss_dssp TS-SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CC-CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence 21 355789999999998842 2 344 777777644
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.43 E-value=1.3e-12 Score=124.58 Aligned_cols=192 Identities=17% Similarity=0.102 Sum_probs=135.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc------C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV------K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~------~ 432 (676)
+.|+++||||++.||++++++|+++|++| .++.+|++++++++++++.+ .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999765 57789999999887766533 5
Q ss_pred CCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 433 PTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 433 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
+|++||+|+.... +-.+...++....+++|+.++..+.+++... +.+++++||.....
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~---------------- 148 (258)
T d1ae1a_ 85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS---------------- 148 (258)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----------------
T ss_pred cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc----------------
Confidence 8999999996531 1112234556688999999999998877542 35788888875431
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------------HHHHHHHhcCceeccCCCccc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPNSMTI 571 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~~~~~ 571 (676)
+......|+.+|...+.+.+.+. ...++|+-.+.|+.+..+. ..+..+....+ . +-+..
T Consensus 149 --~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p---l-gR~~~ 222 (258)
T d1ae1a_ 149 --ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---M-GRAGK 222 (258)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---T-CSCBC
T ss_pred --ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC---C-CCCcC
Confidence 12234679999999999998863 2467999999999887542 12222221111 1 24678
Q ss_pred hhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 572 LDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
.+|+|.+++.++... .+| ++.+.+|
T Consensus 223 pediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 223 PQEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 999999999998533 345 6666554
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.42 E-value=7.1e-13 Score=127.10 Aligned_cols=199 Identities=14% Similarity=0.155 Sum_probs=135.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.|+++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++
T Consensus 9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (260)
T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 88 (260)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999754 56889999999998887654 68
Q ss_pred CEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHHc-----CC-cEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 434 THVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCREN-----GL-LMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 434 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
|++||+||.... |..+...++.+..+++|+.++..+.+++.+. +. .++..+|...+... ...
T Consensus 89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~-----------~~~ 157 (260)
T d1h5qa_ 89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN-----------QSS 157 (260)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------EEE
T ss_pred cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccc-----------ccc
Confidence 999999996521 1112233455678899999999988776432 33 34444444322110 000
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHH
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLP 577 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~ 577 (676)
-.+......|+.+|...+.+.+.+. ...++|+-.+-|+.+.-+. .+...+...-+ . +-+...+|+|.
T Consensus 158 ~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~p---l-~R~g~pedvA~ 233 (260)
T d1h5qa_ 158 LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP---L-NRFAQPEEMTG 233 (260)
T ss_dssp TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT---T-SSCBCGGGGHH
T ss_pred cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCC---C-CCCcCHHHHHH
Confidence 0111234679999999999988863 2467999999999887653 23333332211 1 13567899999
Q ss_pred HHHHHHhcC---CCc-eeEccCCC
Q 005818 578 ISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 578 ~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
+++.++... .+| ++.+.+|.
T Consensus 234 ~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 234 QAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHhcchhCCCcCceEEECCCe
Confidence 999988543 234 67776654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.42 E-value=2.5e-12 Score=122.38 Aligned_cols=210 Identities=19% Similarity=0.214 Sum_probs=144.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc----cCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL----TEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~----~~~~d 83 (676)
|++|||||++.||+++++.|+++ |++|++.+|... ......+++|+.+......+.. ....+
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence 78999999999999999999999 789999988532 2346778999998877665542 23555
Q ss_pred EEEEccccCCcC--------CcCCChHHHHHHHHHHHHHHHHHHHHc---------CCCceEEEEecccccCCCCCCcCC
Q 005818 84 TIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKIT---------GQIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 84 ~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.+++.++..... ...+.+...++.|+.+..++.+.+... .+-.++|++||...+-+...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~---- 143 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---- 143 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT----
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC----
Confidence 666665543211 122234567889999888887765432 11348999999766533322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... ..............+ +.+
T Consensus 144 ----------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~--~~~----- 204 (241)
T d1uaya_ 144 ----------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ--GLPEKAKASLAAQVP--FPP----- 204 (241)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--TSCHHHHHHHHTTCC--SSC-----
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc--hhhhhHHHHHHhcCC--CCC-----
Confidence 346999999999999988876 4899999999999765321 111222233333222 111
Q ss_pred EeeeeHHHHHHHHHHHHhcCC-CCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKGE-VGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~~-~~~~y~i~~~~ 255 (676)
.+...+|+|.+++++++..- .|+++.+.+|-
T Consensus 205 -R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 205 -RLGRPEEYAALVLHILENPMLNGEVVRLDGAL 236 (241)
T ss_dssp -SCCCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred -CCcCHHHHHHHHHHHHhCCCCCCCEEEECCcc
Confidence 25568999999999887532 67888887764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.42 E-value=6.9e-13 Score=126.32 Aligned_cols=186 Identities=15% Similarity=0.167 Sum_probs=133.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCC-ChHHHHHHhhcc-----C
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLE-NRSQLLADIQNV-----K 432 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~-d~~~~~~~~~~~-----~ 432 (676)
.++|+||||++.||.+++++|+++|.+| .++..|++ +.++++++++.+ +
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~ 84 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999753 56778987 555666665544 7
Q ss_pred CCEEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc--------CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN--------GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|++||+||.. . .++.+..+++|+.|+.++.+++... +.++|++||...+.
T Consensus 85 iDilvnnAG~~---~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-------------- 143 (254)
T d1sbya1 85 VDILINGAGIL---D----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-------------- 143 (254)
T ss_dssp CCEEEECCCCC---C----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred CCEEEeCCCCC---C----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--------------
Confidence 89999999965 2 4566788999999999999877552 24678888765441
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCce------eccCCCccchhhH
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKV------VNIPNSMTILDEL 575 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~v~D~ 575 (676)
+......|+.||.....+.+.+. ...++|+..+-|+.+..+ +...+...... ..........+++
T Consensus 144 ----~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v 217 (254)
T d1sbya1 144 ----AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP--LVHTFNSWLDVEPRVAELLLSHPTQTSEQC 217 (254)
T ss_dssp ----CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH--HHHSCCCGGGSCTTHHHHHTTSCCEEHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc--cccccccchhHHHHHHhccccCCCCCHHHH
Confidence 22334679999999999998864 245899999999988755 21111000000 0111134468899
Q ss_pred HHHHHHHHhcCCCc-eeEccCC
Q 005818 576 LPISVEMAKRNLSG-IWNFTNP 596 (676)
Q Consensus 576 a~~~~~~~~~~~~g-~yn~~~~ 596 (676)
|++++.+++...+| ++.+.++
T Consensus 218 a~~~~~~~~~~~tG~vi~vdgG 239 (254)
T d1sbya1 218 GQNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETT
T ss_pred HHHHHHhhhCCCCCCEEEECCC
Confidence 99999888776555 6776665
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.41 E-value=6.2e-13 Score=125.69 Aligned_cols=194 Identities=13% Similarity=0.056 Sum_probs=136.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+.++++||||++.||+++++.|+++|++| .++++|++++++++++++.+ ++|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 45789999999999999999999999855 67889999999998888766 68999
Q ss_pred EECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHcC--CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCC
Q 005818 437 FNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRENG--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTG 513 (676)
Q Consensus 437 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~ 513 (676)
||+|+...... .+...++....+++|+.++..+.+++...- -+.++++|+.... +.+..
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------------~~~~~ 145 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------------GAFGL 145 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------------CHHHH
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------------cccCc
Confidence 99999653211 122234455779999999999999887653 3455555543210 11123
Q ss_pred CchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHHHh
Q 005818 514 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 514 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
..|+.+|...|.+.+.++ ...++|+-.+-|+.+-.+. ..........+ ..-+...+|+|++++.++.
T Consensus 146 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p----~~r~~~p~dva~~v~fL~S 221 (241)
T d2a4ka1 146 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP----LGRAGRPEEVAQAALFLLS 221 (241)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST----TCSCBCHHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCC----CCCCcCHHHHHHHHHHHhc
Confidence 569999999999998874 3457999999998886552 22222222211 1245678999999999986
Q ss_pred cC---CCc-eeEccCCCc
Q 005818 585 RN---LSG-IWNFTNPGV 598 (676)
Q Consensus 585 ~~---~~g-~yn~~~~~~ 598 (676)
.. .+| ++.+.+|..
T Consensus 222 ~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 222 EESAYITGQALYVDGGRS 239 (241)
T ss_dssp GGGTTCCSCEEEESTTTT
T ss_pred chhCCCcCceEEeCCCcc
Confidence 43 345 666666543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.41 E-value=7.2e-13 Score=127.36 Aligned_cols=197 Identities=13% Similarity=0.083 Sum_probs=132.4
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhcc----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
+.|.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999754 56789999999999888765
Q ss_pred -CCCEEEECccccCCCCc-----chhccchhhHHhhhhhhHHHHHHHHHH----cCCcEEEeecCeeeecCCCCCCCCCC
Q 005818 432 -KPTHVFNAAGVTGRPNV-----DWCETHKPETIRTNVVGTLTLADVCRE----NGLLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 432 -~~d~Vih~a~~~~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
++|++||+||....... ....++.+..+++|+.++..+.+++.. .+..+|+++|+....
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~----------- 152 (264)
T d1spxa_ 84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL----------- 152 (264)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS-----------
T ss_pred CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc-----------
Confidence 78999999996411010 112244567789999999998887754 345677777764210
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH------------HHHHHHhcCceeccC
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIP 566 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~ 566 (676)
.+.+....|+.||...+.+.+.+. ...++|+..+.|+.+.-+.. +...........+.
T Consensus 153 ------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl- 225 (264)
T d1spxa_ 153 ------HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA- 225 (264)
T ss_dssp ------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-
T ss_pred ------ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-
Confidence 011223569999999999998863 24579999999988864320 00000000011111
Q ss_pred CCccchhhHHHHHHHHHhcC----CCc-eeEccCCC
Q 005818 567 NSMTILDELLPISVEMAKRN----LSG-IWNFTNPG 597 (676)
Q Consensus 567 ~~~~~v~D~a~~~~~~~~~~----~~g-~yn~~~~~ 597 (676)
+-+...+|+|++++.++..+ .+| ++.+.+|.
T Consensus 226 ~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 226 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 13556899999999988532 345 67776654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.40 E-value=1e-12 Score=126.79 Aligned_cols=197 Identities=14% Similarity=0.074 Sum_probs=134.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------------eeccccCCChHHHHHHhhcc----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------------EYGKGRLENRSQLLADIQNV---- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------------~~~~~Dl~d~~~~~~~~~~~---- 431 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999754 46789999999988887765
Q ss_pred -CCCEEEECccccCCCCcch---hccchhhHHhhhhhhHHHHHHHHHHc----CC-cEEEeecCeeeecCCCCCCCCCCC
Q 005818 432 -KPTHVFNAAGVTGRPNVDW---CETHKPETIRTNVVGTLTLADVCREN----GL-LMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 432 -~~d~Vih~a~~~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~----~~-~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
++|++||+||......... ..++.+..+++|+.++..+.+++... +. .+++.||.....
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~------------ 150 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ------------ 150 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS------------
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc------------
Confidence 6899999999642111111 22345677899999999998887542 33 444444433221
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-----------HHHHHHHh-cCceeccCC
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-----------NFITKISR-YNKVVNIPN 567 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~-~~~~~~~~~ 567 (676)
+......|+.+|...+.+.+.+. ...++|+..+-|+.+.-|. .-+..... ....++. +
T Consensus 151 ------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-g 223 (274)
T d1xhla_ 151 ------AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-G 223 (274)
T ss_dssp ------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-S
T ss_pred ------cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-C
Confidence 11223579999999999998853 3468999999999987542 11111111 1111122 2
Q ss_pred CccchhhHHHHHHHHHhcC----CCc-eeEccCCCc
Q 005818 568 SMTILDELLPISVEMAKRN----LSG-IWNFTNPGV 598 (676)
Q Consensus 568 ~~~~v~D~a~~~~~~~~~~----~~g-~yn~~~~~~ 598 (676)
-+...+|+|.++++++..+ .+| ++.+.+|..
T Consensus 224 R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 224 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 3557899999999988532 344 777777643
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=5.2e-13 Score=127.52 Aligned_cols=186 Identities=13% Similarity=0.093 Sum_probs=130.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
+.+.+|||||++.||.++++.|+++|++| ..+++|++|+++++++++.+
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 34689999999999999999999999754 56789999999998887766
Q ss_pred CCCEEEECccccCC-CCcchhccchhhHHhhhhhhHHHHHHHHHH----c---CCcEEEeecCeeeecCCCCCCCCCCCc
Q 005818 432 KPTHVFNAAGVTGR-PNVDWCETHKPETIRTNVVGTLTLADVCRE----N---GLLMMNYATGCIFEYDAKHPEGTGIGF 503 (676)
Q Consensus 432 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~---~~~~v~~sS~~v~~~~~~~~~~~~~~~ 503 (676)
++|++||+||.... +-.+...++.+..+++|+.++..+.+++.+ . +.++|++||...+..
T Consensus 89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~------------ 156 (257)
T d1xg5a_ 89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV------------ 156 (257)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC------------
T ss_pred CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC------------
Confidence 68999999996521 111233455567799999999998777643 2 357888888653311
Q ss_pred cccCCCCCCCCchhhhHHHHHHHHHHcc-----CeEEEEeeecccCCCCChHHHHHHHHhcCc---e-eccCCCccchhh
Q 005818 504 KEEDKPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISRYNK---V-VNIPNSMTILDE 574 (676)
Q Consensus 504 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---~-~~~~~~~~~v~D 574 (676)
.|......|+.+|...+.+.+.+. ...++++..+-|+.+-.+. ...+..... . ......+...+|
T Consensus 157 ----~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~--~~~~~~~~~~~~~~~~~~~r~~~ped 230 (257)
T d1xg5a_ 157 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF--AFKLHDKDPEKAAATYEQMKCLKPED 230 (257)
T ss_dssp ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH--HHHHTTTCHHHHHHHHC---CBCHHH
T ss_pred ----CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh--hhhcChhhHHHHHhcCCCCCCcCHHH
Confidence 012223559999999999987753 3468999999998776442 111111100 0 001124667899
Q ss_pred HHHHHHHHHhcC
Q 005818 575 LLPISVEMAKRN 586 (676)
Q Consensus 575 ~a~~~~~~~~~~ 586 (676)
+|++++.++..+
T Consensus 231 vA~~v~fL~s~~ 242 (257)
T d1xg5a_ 231 VAEAVIYVLSTP 242 (257)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhCCh
Confidence 999999988765
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.7e-12 Score=121.48 Aligned_cols=195 Identities=15% Similarity=0.097 Sum_probs=136.9
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHHhhcc-CCCEEEECcc
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAG 441 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~ 441 (676)
.+.++++||||++.||+++++.|+++|++| .....|+.+.+.++...+.+ ++|++||+||
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 345789999999999999999999999876 45667888877777766554 6899999999
Q ss_pred ccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc-----CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 442 VTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN-----GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 442 ~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
...... .+...++....+++|+.++..+.+++... +.+++++||+..- ..+......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-----------------~~~~~~~~~ 146 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS-----------------VKGVVNRCV 146 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-----------------TBCCTTBHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc-----------------cCCccchhH
Confidence 763111 11223445577899999999998877542 3588888876421 012233467
Q ss_pred hhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHH------------HHHHHHhcCceeccCCCccchhhHHHHHH
Q 005818 516 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIPNSMTILDELLPISV 580 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 580 (676)
|+.+|...+.+++.+. ...++|+-.+.|+.+..|.. +...+...- .. .-+...+|+++++.
T Consensus 147 Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---pl-~R~~~pedva~~v~ 222 (245)
T d2ag5a1 147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ---KT-GRFATAEEIAMLCV 222 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC---TT-SSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcC---CC-CCCcCHHHHHHHHH
Confidence 9999999999998864 34689999999998876631 111111111 11 23567899999999
Q ss_pred HHHhcC---CCc-eeEccCCC
Q 005818 581 EMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 581 ~~~~~~---~~g-~yn~~~~~ 597 (676)
.++... .+| ++.+.+|.
T Consensus 223 fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 223 YLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp HHHSGGGTTCCSCEEEECTTG
T ss_pred HHhChhhCCCcCceEEeCCCc
Confidence 998653 234 67776654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.38 E-value=3.1e-12 Score=124.19 Aligned_cols=225 Identities=14% Similarity=0.018 Sum_probs=141.6
Q ss_pred CCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
+++.|++|||||+| .||.++++.|+++ |++|++.+|...... .+.+ ........++.+|+.+.+.+.+++..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l--~~~~~~~~~~~~d~~~~~~~~~~~~~~ 77 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPI--AQELNSPYVYELDVSKEEHFKSLYNSV 77 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHH--HHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH--HhhCCceeEeeecccchhhHHHHHHHH
Confidence 46789999999987 7999999999999 789999988642111 1111 11234567789999999887776622
Q ss_pred ----CCCCEEEEccccCCcCC-----cCCChHHHHHHHHH---HHHHHHHHHHHcC-CCceEEEEecccccCCCCCCcCC
Q 005818 80 ----EKIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIY---GTHVLLEACKITG-QIKRFIHVSTDEVYGETDEDAVV 146 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~---~~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 146 (676)
.++|++||+++...... ....+......+.. ....+........ +-..++..|+.+.......
T Consensus 78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~---- 153 (274)
T d2pd4a1 78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH---- 153 (274)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----
T ss_pred HHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc----
Confidence 37999999999765321 11222223333222 2333333332222 1234555666554433322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCce
Q 005818 147 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNV 223 (676)
Q Consensus 147 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (676)
...|+.+|...+.+++..+.+. |+++.++.||.+..+......-............+.
T Consensus 154 ----------~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 214 (274)
T d2pd4a1 154 ----------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL--------- 214 (274)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------
T ss_pred ----------chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------
Confidence 3469999999999988876653 899999999999876442111112222222222211
Q ss_pred EeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 224 RSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 224 ~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..+...+|+|.++++++... -.|+++.+.+|.
T Consensus 215 ~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 215 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence 13667899999999998643 267889898875
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.38 E-value=1.4e-12 Score=126.28 Aligned_cols=228 Identities=13% Similarity=0.039 Sum_probs=142.7
Q ss_pred CCCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHH---
Q 005818 3 TVYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFIL--- 77 (676)
Q Consensus 3 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~--- 77 (676)
-+|++|+||||||+| .||.++++.|+++ |.+|++.+|..... .+.+ ......+...+++|+.+++++..++
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~-~~~~-~~~~~~~~~~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRL-IQRI-TDRLPAKAPLLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHH-HHHH-HTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHH-HHHH-HHHcCCceeeEeeecccccccccccchh
Confidence 468899999999765 5999999999999 68888887754221 1111 1223456788999999987765553
Q ss_pred ----cc-CCCCEEEEccccCCcC---------CcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCCCCC
Q 005818 78 ----LT-EKIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGETDED 143 (676)
Q Consensus 78 ----~~-~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~ 143 (676)
.. ..+|+++|+|+..... ..+.++...+..|+........+......-...+.++|........
T Consensus 78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p-- 155 (268)
T d2h7ma1 78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-- 155 (268)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT--
T ss_pred hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc--
Confidence 11 3589999999975421 1222333455666666666666665433223444444433322221
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccCCC--------CCC--CChHHHHHHHHHC
Q 005818 144 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN--------QFP--EKLIPKFILLAMK 210 (676)
Q Consensus 144 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G~~--------~~~--~~~~~~~~~~~~~ 210 (676)
....|+.+|...+.+++.++.++ |+++..|.||.+-.+. ... ......+.+....
T Consensus 156 ------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (268)
T d2h7ma1 156 ------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ 223 (268)
T ss_dssp ------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH
T ss_pred ------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHh
Confidence 13469999999999999887764 7999999999886541 100 0111222222222
Q ss_pred CCCceeecCCCceEeeeeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005818 211 GKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGE---VGHVYNIGTKKE 256 (676)
Q Consensus 211 ~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~~---~~~~y~i~~~~~ 256 (676)
..++. +.+...+|+++++.+++.... .|+++.+.+|..
T Consensus 224 ~~pl~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 224 RAPIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp HCTTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred cCCCC--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence 22211 124556999999999985422 577888888753
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.38 E-value=1.8e-12 Score=124.31 Aligned_cols=193 Identities=11% Similarity=0.108 Sum_probs=134.6
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
..+++|+||||++.||.++++.|+++|++| ..+.+|++|+++++++++..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 345789999999999999999999999754 66889999999988877654
Q ss_pred CCCEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCe-eeecCCCCCCCCCCCcccc
Q 005818 432 KPTHVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGC-IFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~-v~~~~~~~~~~~~~~~~~e 506 (676)
++|++||+||....... ....++.+..+++|+.++..+++++..+ +.+.++++|+. .+.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~---------------- 147 (259)
T d1ja9a_ 84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT---------------- 147 (259)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----------------
T ss_pred CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc----------------
Confidence 68999999997532111 1233445677999999999999988764 23455555542 221
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-------------------HHHHHHHhcCceec
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-------------------NFITKISRYNKVVN 564 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-------------------~~~~~~~~~~~~~~ 564 (676)
+......|+.+|...+.+++.+. ...++|+-.+.|+.+.-+. .+...+....+
T Consensus 148 --~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 222 (259)
T d1ja9a_ 148 --GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP--- 222 (259)
T ss_dssp --SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST---
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC---
Confidence 11223579999999999988863 3468999999999886442 11111111111
Q ss_pred cCCCccchhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 565 IPNSMTILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 565 ~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
..-+...+|++++++.++... .+| ++.+.+|
T Consensus 223 -l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 223 -LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 113557899999999998654 234 6666554
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.38 E-value=1.4e-12 Score=124.95 Aligned_cols=194 Identities=11% Similarity=0.034 Sum_probs=134.6
Q ss_pred CccEEEEEcCCc--chhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTG--WIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+.++++||||+| .||++++++|+++|++| ..+++|++|+++++++++.+ +
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 346899999998 79999999999999865 56789999999998887654 6
Q ss_pred CCEEEECccccCC-----CCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGR-----PNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
+|++||+|+.... +..+...++....+++|+.++..+.+++... +.++|++||.....
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~-------------- 152 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-------------- 152 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS--------------
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC--------------
Confidence 7999999986410 0111222334467899999999999887643 35678888765431
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+.+....|+.+|...+.+.+.+. ..+++|+-.+.|+.+..+. .....+.+..+ . .-+...+
T Consensus 153 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~p---l-~R~~~pe 224 (256)
T d1ulua_ 153 ----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP---L-RRNITQE 224 (256)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHST---T-SSCCCHH
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCC---C-CCCcCHH
Confidence 12234679999999999998863 2457999999999886542 12222222211 1 2355689
Q ss_pred hHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 574 ELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
|+|++++.++... .+| ++.+.+|-.
T Consensus 225 dvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 225 EVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 9999999988643 234 677766543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=1.5e-12 Score=126.36 Aligned_cols=191 Identities=14% Similarity=0.098 Sum_probs=131.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc------------------------------eeeccccCCChHHHHHHhhcc---
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP------------------------------FEYGKGRLENRSQLLADIQNV--- 431 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~------------------------------v~~~~~Dl~d~~~~~~~~~~~--- 431 (676)
+.|+||||++.||+++++.|+++|.+ +..+.+|++|++++.++++.+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 46789999999999999999999854 256789999999999887665
Q ss_pred CCCEEEECccccCCCCcc-hhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccc
Q 005818 432 KPTHVFNAAGVTGRPNVD-WCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKE 505 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~ 505 (676)
.+|++||+|+........ ...++....+++|+.|+.++.+++.. .+ .++|++||...+.
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~--------------- 147 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--------------- 147 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS---------------
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC---------------
Confidence 689999999965321211 22344557789999999998887633 33 6889988875431
Q ss_pred cCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHh-------cCce------------e
Q 005818 506 EDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISR-------YNKV------------V 563 (676)
Q Consensus 506 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~-------~~~~------------~ 563 (676)
+.+....|+.||...+.+.+.+. ...++++..+.|+.+.-+. ...... .... .
T Consensus 148 ---~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T d1jtva_ 148 ---GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF--MEKVLGSPEEVLDRTDIHTFHRFYQYLAHS 222 (285)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---------CCHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChH--HHHhccCHHHHhhccchhHHHHHHHHHHHH
Confidence 22334679999999999988863 3468999999999886431 111110 0000 0
Q ss_pred -cc-CCCccchhhHHHHHHHHHhcCCCceeEccC
Q 005818 564 -NI-PNSMTILDELLPISVEMAKRNLSGIWNFTN 595 (676)
Q Consensus 564 -~~-~~~~~~v~D~a~~~~~~~~~~~~g~yn~~~ 595 (676)
.. .......+|+|++++.+++.+.+..+.+.+
T Consensus 223 ~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g 256 (285)
T d1jtva_ 223 KQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (285)
T ss_dssp HHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred hhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence 00 001335789999999999887655444443
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.37 E-value=4.8e-12 Score=123.61 Aligned_cols=223 Identities=12% Similarity=0.011 Sum_probs=142.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc---cC----------------CCCCCCCCCeEEEEecC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL---KN----------------LNPSRLSPNFKFIKGDV 67 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~---~~----------------~~~~~~~~~v~~v~~Dl 67 (676)
+..+|||||++.||+++++.|+++ |++|++.++....... +. .........+....+|+
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv 79 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 79 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccC
Confidence 457899999999999999999999 7888876664321100 00 00011122345566789
Q ss_pred CCHHHHHHHHcc-----CCCCEEEEccccCCcCC----cCCCh--------------HHHHHHHHHHHHHHHHHHHHc--
Q 005818 68 ASADLVHFILLT-----EKIDTIMHFAAQTHVDN----SFGNS--------------FEFTKNNIYGTHVLLEACKIT-- 122 (676)
Q Consensus 68 ~d~~~~~~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~--------------~~~~~~nv~~~~~ll~a~~~~-- 122 (676)
++.+.++++++. .++|++||+||...... +.+++ ..++..|+.++..+.+++...
T Consensus 80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 159 (284)
T d1e7wa_ 80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 159 (284)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence 998888877632 47999999999865321 11111 135778888888888765431
Q ss_pred -------CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCCccC
Q 005818 123 -------GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYG 192 (676)
Q Consensus 123 -------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~i~G 192 (676)
+....+|++||.....+.. ....|+.+|...+.+.+.++.++ |+++..+.||.+-.
T Consensus 160 ~~~~~~~~~~~~ii~~~s~~~~~~~~--------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 160 GTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred hhHHHhcCCCCcccccccccccCCcc--------------ceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 1124677777754432222 13469999999999999887764 89999999997432
Q ss_pred CCCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005818 193 PNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKER 257 (676)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~~ 257 (676)
... ......+......++ .+ .+...+|++.++++++... -.|+.+.+.+|-.+
T Consensus 226 ~~~----~~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl 281 (284)
T d1e7wa_ 226 VDD----MPPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281 (284)
T ss_dssp GGG----SCHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccc----CCHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence 222 223444444443321 11 2567899999999988543 26788999888654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.36 E-value=1.3e-12 Score=124.58 Aligned_cols=189 Identities=11% Similarity=0.096 Sum_probs=133.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHHhhcc-----CCCEEEECccc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLADIQNV-----KPTHVFNAAGV 442 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~ 442 (676)
+++||||++.||.++++.|+++|++| .+..+|++|.++++++++.+ ++|++||+||.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 58999999999999999999999876 45578888877777666544 68999999986
Q ss_pred cC--CCCcchhccchhhHHhhhhhhHHHHHHHHHH-----cCCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCc
Q 005818 443 TG--RPNVDWCETHKPETIRTNVVGTLTLADVCRE-----NGLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSF 515 (676)
Q Consensus 443 ~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-----~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~ 515 (676)
.. .|-.+...++....+++|+.++..+.+++.. .+.++|++||...+. +......
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~------------------~~~~~~~ 143 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG------------------PWKELST 143 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS------------------CCTTCHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc------------------ccccccc
Confidence 42 1111223345567789999999998887643 246899998875431 1122367
Q ss_pred hhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------------HHHHHHHhcCceeccCCCccchhhHHHH
Q 005818 516 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------------NFITKISRYNKVVNIPNSMTILDELLPI 578 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 578 (676)
|+.||...+.+.+.+. ..+++|+-.+.|+.+..+. .....+.+..+ . +-+...+|+|.+
T Consensus 144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p---l-~R~g~pedvA~~ 219 (252)
T d1zmta1 144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---L-QRLGTQKELGEL 219 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---S-SSCBCHHHHHHH
T ss_pred cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC---C-CCCcCHHHHHHH
Confidence 9999999999998863 2457899999988875432 12222222221 1 135578999999
Q ss_pred HHHHHhcC---CCc-eeEccCC
Q 005818 579 SVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 579 ~~~~~~~~---~~g-~yn~~~~ 596 (676)
++.++... .+| ++.+.+|
T Consensus 220 v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 220 VAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp HHHHHTTSCGGGTTCEEEESTT
T ss_pred HHHHhCchhcCCcCCeEEECCC
Confidence 99998643 234 7777665
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.36 E-value=4.1e-12 Score=119.50 Aligned_cols=189 Identities=12% Similarity=0.088 Sum_probs=129.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce---------------eeccccCCChHHHHHHhhcc-CCCEEEECccccCCCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF---------------EYGKGRLENRSQLLADIQNV-KPTHVFNAAGVTGRPN 447 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~a~~~~~~~ 447 (676)
.++++||||++.||+++++.|+++|++| .++.+|+++. ++.+++.. ++|++||+||......
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~--~~~~~~~~g~iD~lVnnAG~~~~~~ 81 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD--LDLLFEKVKEVDILVLNAGGPKAGF 81 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC--HHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH--HHHHHHHhCCCcEEEecccccCCcc
Confidence 4689999999999999999999999977 5667888753 34444433 5699999999642111
Q ss_pred -cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHH
Q 005818 448 -VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKA 521 (676)
Q Consensus 448 -~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 521 (676)
.+...++.+..+++|+.++..+.+++.. .+ .++|+++|..... +......|+.+|.
T Consensus 82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~------------------~~~~~~~Y~asKa 143 (234)
T d1o5ia_ 82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS------------------PIENLYTSNSARM 143 (234)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CCTTBHHHHHHHH
T ss_pred hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc------------------cccccccchhHHH
Confidence 1223445567789999999998887743 23 4778887764331 2233467999999
Q ss_pred HHHHHHHHcc---CeEEEEeeecccCCCCChH--H-----HHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---CC
Q 005818 522 MVEELLKEYD---NVCTLRVRMPISSDLNNPR--N-----FITKISRYNKVVNIPNSMTILDELLPISVEMAKRN---LS 588 (676)
Q Consensus 522 ~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~-----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~~ 588 (676)
..+.+.+.+. ...++|+-.+.|+.+..+. . ....+.... .. .-+...+|+|.+++.++... .+
T Consensus 144 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~---pl-~R~~~pediA~~v~fL~S~~s~~it 219 (234)
T d1o5ia_ 144 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI---PM-RRMAKPEEIASVVAFLCSEKASYLT 219 (234)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS---TT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcC---CC-CCCcCHHHHHHHHHHHhChhhcCCc
Confidence 9998888863 2458999999999887653 1 111111111 11 24667899999999988543 23
Q ss_pred c-eeEccCC
Q 005818 589 G-IWNFTNP 596 (676)
Q Consensus 589 g-~yn~~~~ 596 (676)
| ++.+.+|
T Consensus 220 G~~i~vDGG 228 (234)
T d1o5ia_ 220 GQTIVVDGG 228 (234)
T ss_dssp SCEEEESTT
T ss_pred CcEEEECcc
Confidence 4 6766665
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=1.2e-12 Score=126.32 Aligned_cols=201 Identities=13% Similarity=0.040 Sum_probs=139.2
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC---CCCCCCCeEEEEecCCCHHHHHHHHcc-
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN---PSRLSPNFKFIKGDVASADLVHFILLT- 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~v~~v~~Dl~d~~~~~~~~~~- 79 (676)
++++|+||||||++.||.++++.|+++ |++|++.+|....- +... .......+..+.+|+.+.+........
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 86 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETL--QKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 86 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH--HHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHH
Confidence 367899999999999999999999999 78999999864211 1110 012234678899999998887665422
Q ss_pred ----CCCCEEEEccccCCcCC----cCCChHHHHHHHHHHHHHHHHHHH----HcCCCceEEEEecccccCCCCCCcCCC
Q 005818 80 ----EKIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----ITGQIKRFIHVSTDEVYGETDEDAVVG 147 (676)
Q Consensus 80 ----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 147 (676)
..+|++++.|+...... +.+++...+++|+.++..+.+++. +.+ .++|++||...+-+...
T Consensus 87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~p~----- 159 (269)
T d1xu9a_ 87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPM----- 159 (269)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCCTT-----
T ss_pred HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCCCC-----
Confidence 47899999998765432 334455788999999888877664 222 58999999765433222
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHH-----cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCCCc
Q 005818 148 NHEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSN 222 (676)
Q Consensus 148 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (676)
...|+.||...+.+.+.++.+ .++.+..+.||.|-.+ +.+....+..
T Consensus 160 ---------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~----------~~~~~~~~~~--------- 211 (269)
T d1xu9a_ 160 ---------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE----------TAMKAVSGIV--------- 211 (269)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------HHHHHSCGGG---------
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc----------HHHHhccCCc---------
Confidence 346999999999998887765 3588888999988532 2222222211
Q ss_pred eEeeeeHHHHHHHHHHHHhcC
Q 005818 223 VRSYLYCEDVAEAFDTILHKG 243 (676)
Q Consensus 223 ~~~~v~v~D~a~ai~~~~~~~ 243 (676)
.......+++++.++......
T Consensus 212 ~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 212 HMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp GGGCBCHHHHHHHHHHHHHTT
T ss_pred cccCCCHHHHHHHHHHHhhcC
Confidence 112455688888888776543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.33 E-value=6.6e-12 Score=122.38 Aligned_cols=174 Identities=11% Similarity=0.073 Sum_probs=121.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceee------------------------------ccccCCChHHHHHHhhcc-
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEY------------------------------GKGRLENRSQLLADIQNV- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~------------------------------~~~Dl~d~~~~~~~~~~~- 431 (676)
+.++++||||++.||+++++.|+++|++|.+ ...|+.|.++++++++.+
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 3468999999999999999999999987632 236677776666655433
Q ss_pred ----CCCEEEECccccCCC-CcchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCC
Q 005818 432 ----KPTHVFNAAGVTGRP-NVDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 432 ----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
++|++||+||..... -.+...++.+..+++|+.|+..+.+++.. .+ .++|++||...+.
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~----------- 154 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----------- 154 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC-----------
Confidence 689999999975311 11223345567899999999999888743 23 5889998876442
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH-HHH-HHHHhcCceeccCCCccchhhHH
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR-NFI-TKISRYNKVVNIPNSMTILDELL 576 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~v~D~a 576 (676)
+......|+.||...+.+.+.+. ..+++++..+-|+.+--+. ..+ ..+. .....+|+|
T Consensus 155 -------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~----------~~~~PedvA 217 (302)
T d1gz6a_ 155 -------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLV----------EALKPEYVA 217 (302)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHH----------HHSCGGGTH
T ss_pred -------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhH----------hcCCHHHHH
Confidence 11234679999999999988863 3568999999998764321 000 0010 122468999
Q ss_pred HHHHHHHh
Q 005818 577 PISVEMAK 584 (676)
Q Consensus 577 ~~~~~~~~ 584 (676)
.++++++.
T Consensus 218 ~~v~fL~S 225 (302)
T d1gz6a_ 218 PLVLWLCH 225 (302)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHcC
Confidence 99998874
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.33 E-value=6e-12 Score=121.48 Aligned_cols=194 Identities=19% Similarity=0.167 Sum_probs=129.6
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+.++++||||++.||+++++.|+++|++| ..+.+|++++++++++++.+ ++|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 34689999999999999999999999755 66789999999988887654 78999
Q ss_pred EECccccCCCCcc------hhccchhhHHhhhhhhHHHHHHHHH----HcCCcEEEeecCeeeecCCCCCCCCCCCcccc
Q 005818 437 FNAAGVTGRPNVD------WCETHKPETIRTNVVGTLTLADVCR----ENGLLMMNYATGCIFEYDAKHPEGTGIGFKEE 506 (676)
Q Consensus 437 ih~a~~~~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e 506 (676)
||+||........ ....+.+..+++|+.++..+.+++. +.+.++|+++|+..+.
T Consensus 84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~---------------- 147 (276)
T d1bdba_ 84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY---------------- 147 (276)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----------------
T ss_pred cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc----------------
Confidence 9999964211111 0112245778999999999888774 3456788888764331
Q ss_pred CCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcC-------ceeccCCCcc
Q 005818 507 DKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYN-------KVVNIPNSMT 570 (676)
Q Consensus 507 ~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~-------~~~~~~~~~~ 570 (676)
+......|+.+|...+.+.+.+. ... +|+-.+.|+.+.-+. ..-.+..... ...+. +-+.
T Consensus 148 --~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g 223 (276)
T d1bdba_ 148 --PNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMP 223 (276)
T ss_dssp --TTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-SSCC
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-CCCc
Confidence 11223569999999999888752 123 889999998875321 0001100000 01111 1245
Q ss_pred chhhHHHHHHHHHhc---C-CCc-eeEccCC
Q 005818 571 ILDELLPISVEMAKR---N-LSG-IWNFTNP 596 (676)
Q Consensus 571 ~v~D~a~~~~~~~~~---~-~~g-~yn~~~~ 596 (676)
..+|+|.+++.++.. . .+| ++++.+|
T Consensus 224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 224 EVEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp CGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred CHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 689999998887742 2 334 7777665
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=2.7e-12 Score=121.06 Aligned_cols=179 Identities=13% Similarity=0.034 Sum_probs=122.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCcee--------------eccccCCChHHHHHH-------hhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFE--------------YGKGRLENRSQLLAD-------IQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~--------------~~~~Dl~d~~~~~~~-------~~~~~~d~Vih~a~~ 442 (676)
.|+|+||||+|.||+++++.|+++|++|. ....|..+.++.+.+ +...++|++||+||.
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~ 81 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGG 81 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcc
Confidence 36899999999999999999999998872 233444444333322 222257999999984
Q ss_pred cC--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchh
Q 005818 443 TG--RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYS 517 (676)
Q Consensus 443 ~~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 517 (676)
.. .+......++.+..+++|+.++.++.+++..+ +.++|++||...+. +......|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------------~~~~~~~Y~ 143 (236)
T d1dhra_ 82 WAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------------GTPGMIGYG 143 (236)
T ss_dssp CCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHH
T ss_pred cccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC------------------CccCCcccH
Confidence 21 11112223445577899999999999988763 45788888865431 122236799
Q ss_pred hhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC
Q 005818 518 KTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 518 ~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
.||...+.+.+.+.. ..++++..+.|+.+.-|. ........ ....++..+++++.+..++...
T Consensus 144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~--~~~~~~~~----~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM--NRKSMPEA----DFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--HHHHSTTS----CGGGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc--chhhCccc----hhhcCCCHHHHHHHHHHHhCCC
Confidence 999999999999742 357999999999887652 22221111 1124677899999999888653
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.32 E-value=9.9e-12 Score=119.99 Aligned_cols=193 Identities=13% Similarity=0.109 Sum_probs=136.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----CC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----KP 433 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~~ 433 (676)
.++++||||++-||+++++.|+++|++| ..+.+|++|++++.++++.. ++
T Consensus 18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 97 (272)
T d1g0oa_ 18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 97 (272)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999754 66779999999988887755 68
Q ss_pred CEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCC
Q 005818 434 THVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKP 509 (676)
Q Consensus 434 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~ 509 (676)
|++||+++....... +...++....+++|+.++..+++++... +.+.++++|+.... .+
T Consensus 98 dilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-----------------~~ 160 (272)
T d1g0oa_ 98 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------------KA 160 (272)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------------SS
T ss_pred CccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-----------------cc
Confidence 999999996531111 2223445577899999999999998764 34666776653211 01
Q ss_pred CCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc------------------eeccCCC
Q 005818 510 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK------------------VVNIPNS 568 (676)
Q Consensus 510 ~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~------------------~~~~~~~ 568 (676)
......|+.+|...+.+++.+. ...++|+-.+.|+.+..+. ...+..... .... +-
T Consensus 161 ~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR 237 (272)
T d1g0oa_ 161 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM--YHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RR 237 (272)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH--HHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CS
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH--HHHHHHhhhhcccccchHHHHHHHHHccCCC-CC
Confidence 2333669999999999998763 2468999999999987652 222111100 0111 24
Q ss_pred ccchhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 569 MTILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 569 ~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
+...+|+|.+++.++... .+| +..+.+|
T Consensus 238 ~~~peevA~~v~fL~s~~s~~itG~~i~vDGG 269 (272)
T d1g0oa_ 238 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 269 (272)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence 667899999999998653 245 6666655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2e-12 Score=121.91 Aligned_cols=179 Identities=13% Similarity=0.044 Sum_probs=126.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce------------------------eeccccCCChHHHHHHhhcc-----CCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF------------------------EYGKGRLENRSQLLADIQNV-----KPT 434 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d 434 (676)
++.++||||++.||++++++|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id 86 (244)
T d1yb1a_ 7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 86 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCc
Confidence 4689999999999999999999999754 67889999999988887654 689
Q ss_pred EEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHH----cC-CcEEEeecCeeeecCCCCCCCCCCCccccCC
Q 005818 435 HVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCRE----NG-LLMMNYATGCIFEYDAKHPEGTGIGFKEEDK 508 (676)
Q Consensus 435 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~ 508 (676)
++||+||...... .+...+..+..+++|+.|+..+.+++.. .+ .++|++||...+.
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~------------------ 148 (244)
T d1yb1a_ 87 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV------------------ 148 (244)
T ss_dssp EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC------------------
T ss_pred eeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC------------------
Confidence 9999999753111 1222344557899999999999887643 23 4788888876541
Q ss_pred CCCCCCchhhhHHHHHHHHHHccC------eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 509 PNFTGSFYSKTKAMVEELLKEYDN------VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 509 ~~~p~~~Y~~sK~~~E~~~~~~~~------~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+.+....|+.||...+.+.+.+.. ..|+++..+.|+.+.-+ +.+... ... ......+|+|+.++..
T Consensus 149 ~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~------~~~~~~-~~~-~~~~~pe~va~~i~~~ 220 (244)
T d1yb1a_ 149 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG------FIKNPS-TSL-GPTLEPEEVVNRLMHG 220 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC------STTCTH-HHH-CCCCCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh------hhhCcC-ccc-cCCCCHHHHHHHHHHH
Confidence 112236699999999998888642 24799999998654211 111111 111 1344578999998888
Q ss_pred HhcCCC
Q 005818 583 AKRNLS 588 (676)
Q Consensus 583 ~~~~~~ 588 (676)
+..+..
T Consensus 221 ~~~~~~ 226 (244)
T d1yb1a_ 221 ILTEQK 226 (244)
T ss_dssp HHTTCS
T ss_pred HhcCCc
Confidence 776543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.29 E-value=1.1e-10 Score=114.37 Aligned_cols=228 Identities=15% Similarity=0.046 Sum_probs=141.4
Q ss_pred CCCCCeEEEEcCCc--hhHHHHHHHHHHcCCCcEEEEEcCCCcc-----------ccccCCCCCCCCCCe-EEEEec--C
Q 005818 4 VYTPKNILITGAAG--FIASHVCNRLIGNYPEYKIVVLDKLDYC-----------SNLKNLNPSRLSPNF-KFIKGD--V 67 (676)
Q Consensus 4 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-----------~~~~~~~~~~~~~~v-~~v~~D--l 67 (676)
-+++|++|||||+| .||.++++.|+++ |.+|++.+|.... ............... .....| +
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 46789999999987 8999999999999 6888877663210 000001111111111 122222 2
Q ss_pred C---------------------CHHHH-HHHHcc-CCCCEEEEccccCC------cCCcCCChHHHHHHHHHHHHHHHHH
Q 005818 68 A---------------------SADLV-HFILLT-EKIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEA 118 (676)
Q Consensus 68 ~---------------------d~~~~-~~~~~~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~ll~a 118 (676)
. +.+.+ +++.+. .++|++||+||... .+.+.+++...+++|+.+...+.++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 1 11222 222211 48999999998743 1234556778999999999999988
Q ss_pred HHHcC-CCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH----HHcCCCEEEEeeCCccCC
Q 005818 119 CKITG-QIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG----RSYGLPVITTRGNNVYGP 193 (676)
Q Consensus 119 ~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~l~~~ilR~~~i~G~ 193 (676)
+.... +-...+.+++.+...... .....|+.+|...+.+.+..+ .++|+++..+.||.+..+
T Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~ 229 (297)
T d1d7oa_ 163 FLPIMNPGGASISLTYIASERIIP-------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSCCT-------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred HHHHhhcCCcceeeeehhhccccc-------------ccccceecccccccccccccchhccccceEEecccccccccch
Confidence 76542 112455555543322111 123459999988887766543 345899999999999888
Q ss_pred CCCCCChHHHHHHHHHCCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005818 194 NQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKK 255 (676)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~ 255 (676)
..........+.+...+.-++. .+...+|++.++++++... -.|+++.+.+|-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 230 AAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp CSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 7644444455555554433221 3567899999999998542 267888888773
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.29 E-value=8.9e-12 Score=118.74 Aligned_cols=191 Identities=13% Similarity=0.021 Sum_probs=122.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-----------------------eeeccccCCChHHHHHHhhcc-------CCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-----------------------FEYGKGRLENRSQLLADIQNV-------KPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-----------------------v~~~~~Dl~d~~~~~~~~~~~-------~~d 434 (676)
++|+||||++.||.+++++|+++|+. +.++.+|++|.++++++++.+ ++|
T Consensus 4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~id 83 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS 83 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 58999999999999999999999952 377889999998887776543 479
Q ss_pred EEEECccccCC--CCcchhccchhhHHhhhhhhHHHHHHHHHHc----------------CCcEEEeecCeeeecCCCCC
Q 005818 435 HVFNAAGVTGR--PNVDWCETHKPETIRTNVVGTLTLADVCREN----------------GLLMMNYATGCIFEYDAKHP 496 (676)
Q Consensus 435 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----------------~~~~v~~sS~~v~~~~~~~~ 496 (676)
++||+||.... +......++.+..+++|+.|+..+.+++... ...++.+||...+....
T Consensus 84 ilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~--- 160 (250)
T d1yo6a1 84 LLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN--- 160 (250)
T ss_dssp EEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---
T ss_pred EEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC---
Confidence 99999996531 1112223345578999999999988876421 12344444433221110
Q ss_pred CCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchh
Q 005818 497 EGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 497 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
....+..+...|+.||.....+.+.+. +..++++..+-|+.+--+ + ... ......+
T Consensus 161 --------~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~--m----~~~-------~~~~~~e 219 (250)
T d1yo6a1 161 --------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN--L----GGK-------NAALTVE 219 (250)
T ss_dssp --------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------H
T ss_pred --------cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC--C----CCC-------CCCCCHH
Confidence 001122334569999999999988863 356899999999887532 1 110 1234568
Q ss_pred hHHHHHHHHHhcC---CCceeEccCCCcc
Q 005818 574 ELLPISVEMAKRN---LSGIWNFTNPGVV 599 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g~yn~~~~~~~ 599 (676)
+.++.++..+... .+|.|..-++.++
T Consensus 220 ~~a~~~~~~~~~~~~~~sG~f~~~~g~p~ 248 (250)
T d1yo6a1 220 QSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp HHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred HHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence 8888888888653 3465544455443
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.26 E-value=4.7e-12 Score=119.49 Aligned_cols=177 Identities=18% Similarity=0.154 Sum_probs=118.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce--------------eeccccCCChHHHHH-------HhhccCCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF--------------EYGKGRLENRSQLLA-------DIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v--------------~~~~~Dl~d~~~~~~-------~~~~~~~d~Vih~a~~~ 443 (676)
.||+||||+|.||++++++|+++|++| ..+.+|..+.+.... .++.-++|++||+||..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~ 82 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW 82 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccc
Confidence 379999999999999999999999987 233445554333222 22223679999999953
Q ss_pred C--CCCcchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhh
Q 005818 444 G--RPNVDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSK 518 (676)
Q Consensus 444 ~--~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~ 518 (676)
. .+......+..+..+++|+.++..+.+++..+ +.+++++||...+. +.+....|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------------~~~~~~~Y~a 144 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------PTPSMIGYGM 144 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHHH
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------------CcccccchHH
Confidence 1 11111122344567899999999999988764 35778877764331 2223467999
Q ss_pred hHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhc
Q 005818 519 TKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 519 sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
||...+.+.+.+.. ..++++..+.|+.+.-+ +......... ...++..+|+++.++..+..
T Consensus 145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~--~~~~~~~~~~----~~~~~~~~~va~~~~~~l~~ 210 (235)
T d1ooea_ 145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP--MNRKWMPNAD----HSSWTPLSFISEHLLKWTTE 210 (235)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH--HHHHHSTTCC----GGGCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc--chhhhCcCCc----cccCCCHHHHHHHHHHHhcC
Confidence 99999999988632 35778888999888754 2333322211 12466789999988766544
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=1.4e-11 Score=118.11 Aligned_cols=184 Identities=13% Similarity=0.089 Sum_probs=127.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHH---cCCc--------------------------eeeccccCCChHHHHHHhhcc--
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEK---KGIP--------------------------FEYGKGRLENRSQLLADIQNV-- 431 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~---~g~~--------------------------v~~~~~Dl~d~~~~~~~~~~~-- 431 (676)
..+.++||||++.||.+++++|++ +|++ +..+++|++|+++++++++.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 346899999999999999999986 6754 366889999999988876432
Q ss_pred -------CCCEEEECccccCCCCcc----hhccchhhHHhhhhhhHHHHHHHHHHc----C---CcEEEeecCeeeecCC
Q 005818 432 -------KPTHVFNAAGVTGRPNVD----WCETHKPETIRTNVVGTLTLADVCREN----G---LLMMNYATGCIFEYDA 493 (676)
Q Consensus 432 -------~~d~Vih~a~~~~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~---~~~v~~sS~~v~~~~~ 493 (676)
.+|++||+||..+..... ...++....+++|+.++..+.+++... + .++|++||...+.
T Consensus 85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~--- 161 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--- 161 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---
T ss_pred hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC---
Confidence 468999999965311111 112334567899999999999988653 1 3677777764431
Q ss_pred CCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc-CeEEEEeeecccCCCCChHHHHHHHHhcCc---------ee
Q 005818 494 KHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD-NVCTLRVRMPISSDLNNPRNFITKISRYNK---------VV 563 (676)
Q Consensus 494 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---------~~ 563 (676)
+......|+.||...+.+.+.+. +..++|+..+.|+.+..+. ......... ..
T Consensus 162 ---------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~ 224 (259)
T d1oaaa_ 162 ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM--QQLARETSKDPELRSKLQKL 224 (259)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH--HHHHHHHCSCHHHHHHHHHH
T ss_pred ---------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH--HHHhhhcCCCHHHHHHHHhc
Confidence 22334779999999999998862 3468999999999998663 111111100 00
Q ss_pred ccCCCccchhhHHHHHHHHHhcC
Q 005818 564 NIPNSMTILDELLPISVEMAKRN 586 (676)
Q Consensus 564 ~~~~~~~~v~D~a~~~~~~~~~~ 586 (676)
...+.+...+|+|++++.++...
T Consensus 225 ~~~~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 225 KSDGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp HHTTCSBCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHhhhc
Confidence 11124567899999999888653
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.25 E-value=8.2e-12 Score=119.91 Aligned_cols=183 Identities=14% Similarity=0.090 Sum_probs=127.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc----------------------------eeeccccCCChHHHHHHhhcc----C
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP----------------------------FEYGKGRLENRSQLLADIQNV----K 432 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~----------------------------v~~~~~Dl~d~~~~~~~~~~~----~ 432 (676)
..|+||||+|.||.+++++|+++|++ +.++.+|++|++++.++++.+ +
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~ 89 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP 89 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence 37999999999999999999999963 256778999999999888765 4
Q ss_pred CCEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHHcCC-cEEEeecCeeeecCCCCCCCCCCCccccCCCC
Q 005818 433 PTHVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCRENGL-LMMNYATGCIFEYDAKHPEGTGIGFKEEDKPN 510 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~ 510 (676)
+|.|||+|+....... +...++....+.+|+.++.++.+++...+. ++|++||...+.+ .
T Consensus 90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g------------------~ 151 (259)
T d2fr1a1 90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG------------------A 151 (259)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC------------------C
T ss_pred ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC------------------C
Confidence 7999999997532111 112233346689999999999998877664 6778888755421 1
Q ss_pred CCCCchhhhHHHHHHHHHHccCeEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcCCC
Q 005818 511 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEMAKRNLS 588 (676)
Q Consensus 511 ~p~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 588 (676)
.....|+.+|...+.+.+.+. ..|+++..+.|+.+.++... ...... ..-..+-..+..+++++++..++.++..
T Consensus 152 ~~~~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~-~~~~~~-~~~~~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 152 PGLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMA-EGPVAD-RFRRHGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp TTCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC--------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred cccHHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccc-cchHHH-HHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence 223669999999999887763 35788888988877665321 111100 0011122456789999999998887643
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.24 E-value=6.8e-11 Score=114.03 Aligned_cols=220 Identities=16% Similarity=0.120 Sum_probs=136.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC---CCCCCCCCeEEEEecCCC----HHHHHHHHc--
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL---NPSRLSPNFKFIKGDVAS----ADLVHFILL-- 78 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~v~~Dl~d----~~~~~~~~~-- 78 (676)
.++|||||++.||.++++.|+++ |++|++.+|...... +.+ ...........++.|+.+ .+.+.++++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAA-QRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 78 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHH-HHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHH
Confidence 36899999999999999999999 789999998643210 000 001123456667766654 333333321
Q ss_pred --c-CCCCEEEEccccCCcCCcC---------------CChHHHHHHHHHHHHHHHHHHHHcC--------CCceEEEEe
Q 005818 79 --T-EKIDTIMHFAAQTHVDNSF---------------GNSFEFTKNNIYGTHVLLEACKITG--------QIKRFIHVS 132 (676)
Q Consensus 79 --~-~~~d~Vih~a~~~~~~~~~---------------~~~~~~~~~nv~~~~~ll~a~~~~~--------~~~~~v~~S 132 (676)
+ .++|++||+||........ ..+...+..|..+...........- ....++.+|
T Consensus 79 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T d1mxha_ 79 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 158 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence 1 4799999999976532110 0122344455555554444433211 123556666
Q ss_pred cccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHH
Q 005818 133 TDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM 209 (676)
Q Consensus 133 S~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 209 (676)
+......... ...|+.+|...+.+++.++.+ +|+++..+.||.+.-+...+ ....+...
T Consensus 159 ~~~~~~~~~~--------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----~~~~~~~~ 220 (266)
T d1mxha_ 159 DAMTDLPLPG--------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYR 220 (266)
T ss_dssp CGGGGSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC----HHHHHHHH
T ss_pred hccccccCcc--------------hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC----HHHHHHHH
Confidence 6544333222 346999999999999888775 48999999999987665432 23333343
Q ss_pred CCCCceeecCCCceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005818 210 KGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTKKE 256 (676)
Q Consensus 210 ~~~~~~~~~~~~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~~~ 256 (676)
..-++ + +.+...+|++.++++++... -.|+++.+.+|-.
T Consensus 221 ~~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 221 RKVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp TTCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hcCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 33221 1 12356799999999999643 2678899988753
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.23 E-value=1.1e-11 Score=117.85 Aligned_cols=151 Identities=15% Similarity=0.066 Sum_probs=107.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHH---cCCc-----------------------eeeccccCCChHHHHHHhhcc------
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEK---KGIP-----------------------FEYGKGRLENRSQLLADIQNV------ 431 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~---~g~~-----------------------v~~~~~Dl~d~~~~~~~~~~~------ 431 (676)
|++|+||||++.||.++++.|++ +|++ +.++.+|++|+++++++++..
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 56899999999999999999974 5753 477899999998888776532
Q ss_pred -CCCEEEECccccCCCC-c-chhccchhhHHhhhhhhHHHHHHHHHHc----------------CCcEEEeecCeeeecC
Q 005818 432 -KPTHVFNAAGVTGRPN-V-DWCETHKPETIRTNVVGTLTLADVCREN----------------GLLMMNYATGCIFEYD 492 (676)
Q Consensus 432 -~~d~Vih~a~~~~~~~-~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----------------~~~~v~~sS~~v~~~~ 492 (676)
++|++||+||...... . +...++....+++|+.|+..+.+++... +.++|+++|....-.
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~- 160 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ- 160 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC-
Confidence 6899999999653111 1 1122334567899999999998876431 246788877542210
Q ss_pred CCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCCh
Q 005818 493 AKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 549 (676)
Q Consensus 493 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 549 (676)
..+......|+.||.....+.+.+. ...++++..+.|+.+.-+
T Consensus 161 --------------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 161 --------------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp --------------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred --------------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 0122233579999999999887753 345799999999888643
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.22 E-value=7.3e-11 Score=115.38 Aligned_cols=196 Identities=12% Similarity=0.045 Sum_probs=130.8
Q ss_pred CCccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----
Q 005818 382 KPFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
.+.++++||||+|.||++++++|+++|++| ..+.+|+++.+.++++++..
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 345789999999999999999999999765 57789999999988776554
Q ss_pred CCCEEEECccccCCCCc-chhccchhhHHhhhhhhHHHHHHHHHHc-----CC-cEEEeecCeeeecCCCCCCCCCCCcc
Q 005818 432 KPTHVFNAAGVTGRPNV-DWCETHKPETIRTNVVGTLTLADVCREN-----GL-LMMNYATGCIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~-~~v~~sS~~v~~~~~~~~~~~~~~~~ 504 (676)
++|++||+||....... .....+....+.+|..+...+...+... +. .++..+|.....
T Consensus 103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~-------------- 168 (294)
T d1w6ua_ 103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-------------- 168 (294)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------
T ss_pred ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--------------
Confidence 68999999996531111 1112334466788888887776654321 23 334444432221
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH---------HHHHHHHhcCceeccCCCccch
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR---------NFITKISRYNKVVNIPNSMTIL 572 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~v 572 (676)
+......|+.+|...+.+++.+. ...++|+-.+-|+.+..+. ..........+ . +-+...
T Consensus 169 ----~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~p---l-~R~~~p 240 (294)
T d1w6ua_ 169 ----GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---C-GRLGTV 240 (294)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---T-SSCBCH
T ss_pred ----cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCC---C-CCCCCH
Confidence 11223569999999999998863 3468999999999987553 12222222211 1 235568
Q ss_pred hhHHHHHHHHHhcC---CCc-eeEccCCCcc
Q 005818 573 DELLPISVEMAKRN---LSG-IWNFTNPGVV 599 (676)
Q Consensus 573 ~D~a~~~~~~~~~~---~~g-~yn~~~~~~~ 599 (676)
+|+|.++..++... .+| +..+.+|..+
T Consensus 241 ediA~~v~fL~sd~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 241 EELANLAAFLCSDYASWINGAVIKFDGGEEV 271 (294)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred HHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence 99999999998543 244 7888777543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=4.7e-11 Score=114.82 Aligned_cols=185 Identities=10% Similarity=0.003 Sum_probs=127.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-------------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-------------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+.++++|||||+.||.++++.|+++|++| ..+..|+.+.+......+.. .
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 92 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 92 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence 44789999999999999999999999865 45667888777666554433 5
Q ss_pred CCEEEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHH----HcCCcEEEeecCeeeecCCCCCCCCCCCccccC
Q 005818 433 PTHVFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCR----ENGLLMMNYATGCIFEYDAKHPEGTGIGFKEED 507 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~ 507 (676)
+|+++|+|+...... .....++....+++|+.++..+.+++. +.+.++|++||...+.
T Consensus 93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~----------------- 155 (269)
T d1xu9a_ 93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----------------- 155 (269)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------------
T ss_pred ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC-----------------
Confidence 799999998652111 112234445678999999998887764 3456888888875431
Q ss_pred CCCCCCCchhhhHHHHHHHHHHccC-----eEEEEeeecccCCCCChHHHHHHHHhcCceeccCCCccchhhHHHHHHHH
Q 005818 508 KPNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISVEM 582 (676)
Q Consensus 508 ~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 582 (676)
+.+....|+.||...+.+.+.+.. .+++++..+.|+.+.-+ +..+...+... ......+++++.++..
T Consensus 156 -~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~--~~~~~~~~~~~----~~~~~~e~~a~~i~~~ 228 (269)
T d1xu9a_ 156 -AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE--TAMKAVSGIVH----MQAAPKEECALEIIKG 228 (269)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH--HHHHHSCGGGG----GGCBCHHHHHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc--HHHHhccCCcc----ccCCCHHHHHHHHHHH
Confidence 223347899999999999888642 35789999999888754 22222222111 1234568899888887
Q ss_pred HhcCCCcee
Q 005818 583 AKRNLSGIW 591 (676)
Q Consensus 583 ~~~~~~g~y 591 (676)
+......+|
T Consensus 229 ~~~~~~~i~ 237 (269)
T d1xu9a_ 229 GALRQEEVY 237 (269)
T ss_dssp HHTTCSEEE
T ss_pred hhcCCCEEE
Confidence 765544443
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=2e-10 Score=109.10 Aligned_cols=183 Identities=13% Similarity=0.146 Sum_probs=123.0
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce---------------------eeccccCCChHHHHHHhhcc-----CCCEE
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF---------------------EYGKGRLENRSQLLADIQNV-----KPTHV 436 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v---------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~V 436 (676)
+++.++||||++.||.+++++|+++|++| .....|+.+...+++..... ..|.+
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccc
Confidence 35689999999999999999999999876 33445666665555443322 56999
Q ss_pred EECccccCCCCc-------chhccchhhHHhhhhhhHHHHHHHHHHc-----------CCcEEEeecCeeeecCCCCCCC
Q 005818 437 FNAAGVTGRPNV-------DWCETHKPETIRTNVVGTLTLADVCREN-----------GLLMMNYATGCIFEYDAKHPEG 498 (676)
Q Consensus 437 ih~a~~~~~~~~-------~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----------~~~~v~~sS~~v~~~~~~~~~~ 498 (676)
+++++....... ....++....+++|+.++.++.+++... +.++|++||...+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-------- 155 (248)
T d2o23a1 84 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-------- 155 (248)
T ss_dssp EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--------
T ss_pred ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc--------
Confidence 988764311010 1112334567899999999999988553 23688888876542
Q ss_pred CCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--HH----HHHHHhcCceeccCCCc
Q 005818 499 TGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NF----ITKISRYNKVVNIPNSM 569 (676)
Q Consensus 499 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~----~~~~~~~~~~~~~~~~~ 569 (676)
+......|+.+|...+.+.+.+. ...++|+..+.|+.+.-+. .+ ...+... ....+-+
T Consensus 156 ----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~---~pl~~R~ 222 (248)
T d2o23a1 156 ----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQ---VPFPSRL 222 (248)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHT---CSSSCSC
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhc---CCCCCCC
Confidence 22334679999999999998864 3457999999998876542 11 1111111 1111235
Q ss_pred cchhhHHHHHHHHHhcC
Q 005818 570 TILDELLPISVEMAKRN 586 (676)
Q Consensus 570 ~~v~D~a~~~~~~~~~~ 586 (676)
...+|+|++++.+++.+
T Consensus 223 g~peevA~~v~fL~s~~ 239 (248)
T d2o23a1 223 GDPAEYAHLVQAIIENP 239 (248)
T ss_dssp BCHHHHHHHHHHHHHCT
T ss_pred cCHHHHHHHHHHHHhCC
Confidence 67899999999988754
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.11 E-value=9.1e-10 Score=105.27 Aligned_cols=218 Identities=16% Similarity=0.081 Sum_probs=126.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHH----cc--C
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFIL----LT--E 80 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~----~~--~ 80 (676)
||.||||||++.||+++++.|+++ |++|++.+|+... ...|+.+.+...... .+ .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence 588999999999999999999999 7899998885310 246777776654433 11 3
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHc---CCCceEEEEecccccCCCCCCcCC------C----
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKIT---GQIKRFIHVSTDEVYGETDEDAVV------G---- 147 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~------~---- 147 (676)
.+|+++++|+.... .+........|..+...+.+..... ........+++............. .
T Consensus 62 ~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 138 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK 138 (257)
T ss_dssp CCSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred CCcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence 58999999987543 2344566777887777766554321 113455555553221111000000 0
Q ss_pred ---CCCCC-CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCCccCCCCCCCChHHHHHHHHHCCCCceeecCC
Q 005818 148 ---NHEAS-QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDG 220 (676)
Q Consensus 148 ---~~e~~-~~~p~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (676)
..... ...+...|+.+|...+.+.+.++.+ +|+++..+.||.+-.+......--....+...+.. .++
T Consensus 139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~Pl---- 213 (257)
T d1fjha_ 139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-PPM---- 213 (257)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-CST----
T ss_pred EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-CCC----
Confidence 00000 0111235999999999999887765 48999999999997654311000001111111111 111
Q ss_pred CceEeeeeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005818 221 SNVRSYLYCEDVAEAFDTILHKG---EVGHVYNIGTK 254 (676)
Q Consensus 221 ~~~~~~v~v~D~a~ai~~~~~~~---~~~~~y~i~~~ 254 (676)
+ -+...+|++.++++++... -.|+.+.+.+|
T Consensus 214 -g--R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 214 -G--RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp -T--SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred -C--CCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 1 2556799999999998543 26788888776
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=2.4e-11 Score=117.47 Aligned_cols=186 Identities=15% Similarity=0.027 Sum_probs=120.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHc-CCce------------------------eeccccCCChHHHHHHhhcc-----CCCE
Q 005818 386 KFLIYGRTGWIGGLLSKICEKK-GIPF------------------------EYGKGRLENRSQLLADIQNV-----KPTH 435 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~-g~~v------------------------~~~~~Dl~d~~~~~~~~~~~-----~~d~ 435 (676)
.++||||++.||.+++++|+++ |++| .++.+|++|.++++++++.+ ++|+
T Consensus 5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDi 84 (275)
T d1wmaa1 5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDV 84 (275)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEE
Confidence 3499999999999999999986 7543 77889999999988776655 6899
Q ss_pred EEECccccCCCC-cchhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecC-CCCC--------CCCCC-
Q 005818 436 VFNAAGVTGRPN-VDWCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYD-AKHP--------EGTGI- 501 (676)
Q Consensus 436 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~-~~~~--------~~~~~- 501 (676)
+||+||...... .....++.+..+++|+.|+..+.+++... +.++|++||...+... ...| .+...
T Consensus 85 LVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~ 164 (275)
T d1wmaa1 85 LVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEE 164 (275)
T ss_dssp EEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHH
T ss_pred EEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchh
Confidence 999999753111 11122334467899999999999988653 3578888886433211 0000 00000
Q ss_pred -------------CccccCCCCCCCCchhhhHHHHHHHHHHcc-------CeEEEEeeecccCCCCChHHHHHHHHhcCc
Q 005818 502 -------------GFKEEDKPNFTGSFYSKTKAMVEELLKEYD-------NVCTLRVRMPISSDLNNPRNFITKISRYNK 561 (676)
Q Consensus 502 -------------~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-------~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~ 561 (676)
.-.....+..+...|+.||.....+.+.+. +..++++..+-|+.+.-+- .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m------~~--- 235 (275)
T d1wmaa1 165 ELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM------AG--- 235 (275)
T ss_dssp HHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT------TC---
T ss_pred hhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc------cc---
Confidence 000001123445679999999887765532 2347899999998876321 00
Q ss_pred eeccCCCccchhhHHHHHHHHHh
Q 005818 562 VVNIPNSMTILDELLPISVEMAK 584 (676)
Q Consensus 562 ~~~~~~~~~~v~D~a~~~~~~~~ 584 (676)
.......+|.|+.++.++.
T Consensus 236 ----~~~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 236 ----PKATKSPEEGAETPVYLAL 254 (275)
T ss_dssp ----TTCSBCHHHHTHHHHHHHS
T ss_pred ----CcccCCHHHHHHHHHHHHc
Confidence 0123357888888887764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.11 E-value=1.1e-09 Score=108.41 Aligned_cols=171 Identities=11% Similarity=0.026 Sum_probs=109.7
Q ss_pred CCeEEEEc--CCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc------ccCC------CCCCCCCCeEEEEe-------
Q 005818 7 PKNILITG--AAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN------LKNL------NPSRLSPNFKFIKG------- 65 (676)
Q Consensus 7 ~~~vlVtG--atG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~------~~~~------~~~~~~~~v~~v~~------- 65 (676)
.|.+|||| ++..||.++++.|+++ |.+|++.++...... ...+ .............+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence 47899999 5569999999999999 788877655321100 0000 00000111222222
Q ss_pred -------------cCCCHHHHHHHHc----c-CCCCEEEEccccCCc------CCcCCChHHHHHHHHHHHHHHHHHHHH
Q 005818 66 -------------DVASADLVHFILL----T-EKIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKI 121 (676)
Q Consensus 66 -------------Dl~d~~~~~~~~~----~-~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~ 121 (676)
|+.+.+.++.+++ . .++|++||.|+.... +.+.+++...+++|+.++..+.+++..
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 4445444444331 1 479999999986432 234556778899999999988887765
Q ss_pred c-CCCceEEEEecccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH----HcCCCEEEEeeCCccC
Q 005818 122 T-GQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR----SYGLPVITTRGNNVYG 192 (676)
Q Consensus 122 ~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~l~~~ilR~~~i~G 192 (676)
. .+-.++|.+||.+...... .....|+.+|...+.+++.++. ++|+++..|.||.|--
T Consensus 160 ~m~~~GsIv~iss~~~~~~~p-------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 160 IMKPQSSIISLTYHASQKVVP-------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp GEEEEEEEEEEECGGGTSCCT-------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred hcccccccccceeehhccccc-------------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 3 2235799998865432211 1234599999999988887664 3589999999998743
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.09 E-value=3.6e-10 Score=109.98 Aligned_cols=194 Identities=11% Similarity=0.069 Sum_probs=126.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceee-------------------------------------------ccccCCChH
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEY-------------------------------------------GKGRLENRS 422 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~-------------------------------------------~~~Dl~d~~ 422 (676)
.++||||++.||+++++.|+++|++|.+ ..+|+++.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 6899999999999999999999987622 235678888
Q ss_pred HHHHHhhcc-----CCCEEEECccccCCCCc-chhcc--------------chhhHHhhhhhhHHHHHHHHHHc------
Q 005818 423 QLLADIQNV-----KPTHVFNAAGVTGRPNV-DWCET--------------HKPETIRTNVVGTLTLADVCREN------ 476 (676)
Q Consensus 423 ~~~~~~~~~-----~~d~Vih~a~~~~~~~~-~~~~~--------------~~~~~~~~Nv~g~~~ll~a~~~~------ 476 (676)
+++++++.+ ++|++||+||....... +...+ .....+.+|+.++..+.+++.+.
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 163 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA 163 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence 888777544 68999999996531111 11111 11235788999999998876542
Q ss_pred ---C--CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCC
Q 005818 477 ---G--LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNN 548 (676)
Q Consensus 477 ---~--~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g 548 (676)
+ ..++..+|.... .+......|+.+|...+.+.+.+. ...++|+-.+-|+.+..
T Consensus 164 ~~~~~~~~ii~~~s~~~~------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 164 KHRGTNYSIINMVDAMTN------------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp GGSCSCEEEEEECCTTTT------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred HhcCCCCccccccccccc------------------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 1 234444333211 122334679999999999998863 34588999898886432
Q ss_pred hH----HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---CCc-eeEccCCCccc
Q 005818 549 PR----NFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN---LSG-IWNFTNPGVVS 600 (676)
Q Consensus 549 ~~----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~~~s 600 (676)
.. .+........+ ...-+...+|++++++.++... .+| ++.+.+|-.++
T Consensus 226 ~~~~~~~~~~~~~~~~p---l~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 226 VDDMPPAVWEGHRSKVP---LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp GGGSCHHHHHHHHTTCT---TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cccCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 22 33333332222 1223557899999999988643 234 77777775543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=4.7e-10 Score=107.30 Aligned_cols=195 Identities=10% Similarity=0.062 Sum_probs=127.6
Q ss_pred CCccEEEEEcCCc--chhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----
Q 005818 382 KPFLKFLIYGRTG--WIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV----- 431 (676)
Q Consensus 382 ~~~~~vlitG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~----- 431 (676)
.+.++|+||||+| .||+++++.|+++|++| .....|+.+..+..+.++..
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 3457999999999 79999999999999876 34455666666655554433
Q ss_pred CCCEEEECccccCCCCcc------hhccchhhHHhhhhhhHHHHHHHHHHc---CCcEEEeecCeeeecCCCCCCCCCCC
Q 005818 432 KPTHVFNAAGVTGRPNVD------WCETHKPETIRTNVVGTLTLADVCREN---GLLMMNYATGCIFEYDAKHPEGTGIG 502 (676)
Q Consensus 432 ~~d~Vih~a~~~~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~v~~sS~~v~~~~~~~~~~~~~~ 502 (676)
++|++||+|+....+..+ ...+.....+.+|+.+...+++++... +..++++||.....
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~------------ 150 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------ 150 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc------------
Confidence 579999999865211110 011122345678888888888877654 23466666654221
Q ss_pred ccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccc
Q 005818 503 FKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTI 571 (676)
Q Consensus 503 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~ 571 (676)
+.+....|+.||...+.+++.+. ...++|+-.+.|+.+..+. ..........+ . +-+..
T Consensus 151 ------~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p---l-~R~~~ 220 (258)
T d1qsga_ 151 ------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP---I-RRTVT 220 (258)
T ss_dssp ------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST---T-SSCCC
T ss_pred ------CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCC---C-CCCcC
Confidence 12234679999999999998863 3457999999999987542 12222222111 1 23667
Q ss_pred hhhHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 572 LDELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 572 v~D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
.+|++.++..++... .+| ++.+.+|-.
T Consensus 221 peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 221 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 899999999998543 335 677766643
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.03 E-value=1.5e-09 Score=102.53 Aligned_cols=192 Identities=15% Similarity=0.159 Sum_probs=127.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce------------eeccccCCChHHHHHHhhc----cCCCEEEECccccCCCC-
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF------------EYGKGRLENRSQLLADIQN----VKPTHVFNAAGVTGRPN- 447 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v------------~~~~~Dl~d~~~~~~~~~~----~~~d~Vih~a~~~~~~~- 447 (676)
|+++||||++.||+++++.|+++|++| ...++|+++......+... ...+.+++.++......
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 81 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccc
Confidence 479999999999999999999999877 4556888876655544332 23456666655321000
Q ss_pred ----cchhccchhhHHhhhhhhHHHHHHHHHHc-----------CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCC
Q 005818 448 ----VDWCETHKPETIRTNVVGTLTLADVCREN-----------GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFT 512 (676)
Q Consensus 448 ----~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----------~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p 512 (676)
.....+.....+++|+.+...+...+... +.++|++||...+. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------------------~~~~ 143 (241)
T d1uaya_ 82 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------------------GQIG 143 (241)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------------------CCTT
T ss_pred cccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc------------------CCCC
Confidence 11112334466899999999888876543 24788888876542 1123
Q ss_pred CCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH------HHHHHHHhcCceeccCCCccchhhHHHHHHHHH
Q 005818 513 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTILDELLPISVEMA 583 (676)
Q Consensus 513 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 583 (676)
...|+.+|...+.+.+.+. ..+++|+-.+-|+.+.-+. .....+....+. ..-+.-.+|+|.+++.++
T Consensus 144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~R~g~pedvA~~v~fL~ 220 (241)
T d1uaya_ 144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF---PPRLGRPEEYAALVLHIL 220 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS---SCSCCCHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCC---CCCCcCHHHHHHHHHHHH
Confidence 4679999999999998864 2468999999999998663 122222222221 123456899999999988
Q ss_pred hcC-CCc-eeEccCCC
Q 005818 584 KRN-LSG-IWNFTNPG 597 (676)
Q Consensus 584 ~~~-~~g-~yn~~~~~ 597 (676)
... .+| ++.+.+|-
T Consensus 221 s~~~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 221 ENPMLNGEVVRLDGAL 236 (241)
T ss_dssp HCTTCCSCEEEESTTC
T ss_pred hCCCCCCCEEEECCcc
Confidence 754 234 77776653
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.91 E-value=2.7e-09 Score=102.56 Aligned_cols=200 Identities=11% Similarity=0.003 Sum_probs=124.2
Q ss_pred CCccEEEEEcCCc--chhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHHhhcc------
Q 005818 382 KPFLKFLIYGRTG--WIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLADIQNV------ 431 (676)
Q Consensus 382 ~~~~~vlitG~~G--~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~~~~~------ 431 (676)
++.++++||||+| .||.++++.|+++|++| ..+++|++++++++.+++.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 3457999999754 69999999999999755 56778999887766654443
Q ss_pred --CCCEEEECccccCCCC------cchhccchhhHHhhhhhhHHHHHHHHHHcC--CcEEEeecCeeeecCCCCCCCCCC
Q 005818 432 --KPTHVFNAAGVTGRPN------VDWCETHKPETIRTNVVGTLTLADVCRENG--LLMMNYATGCIFEYDAKHPEGTGI 501 (676)
Q Consensus 432 --~~d~Vih~a~~~~~~~------~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~v~~sS~~v~~~~~~~~~~~~~ 501 (676)
++|+++|+|+...... .+....+....+..|+........++.... ...++.+|.....
T Consensus 84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----------- 152 (268)
T d2h7ma1 84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----------- 152 (268)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-----------
T ss_pred CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc-----------
Confidence 4699999999641100 011112223446777777777776665543 2333333332111
Q ss_pred CccccCCCCCCCCchhhhHHHHHHHHHHccC---eEEEEeeecccCCCCChHH--H------------HHHHHhc-Ccee
Q 005818 502 GFKEEDKPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------------ITKISRY-NKVV 563 (676)
Q Consensus 502 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------------~~~~~~~-~~~~ 563 (676)
+.+....|+.+|...+.+++.+.. ..++|+-.+.|+.+..+.. + ....... ....
T Consensus 153 -------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (268)
T d2h7ma1 153 -------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA 225 (268)
T ss_dssp -------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred -------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC
Confidence 112236799999999999988632 3478999999998875521 0 0000000 0011
Q ss_pred ccCCCccchhhHHHHHHHHHhcC---CCc-eeEccCCCcc
Q 005818 564 NIPNSMTILDELLPISVEMAKRN---LSG-IWNFTNPGVV 599 (676)
Q Consensus 564 ~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~~~ 599 (676)
+....+...+|+++++..++... .+| ++.+.+|-.+
T Consensus 226 pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 226 PIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp TTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 22234667899999999988532 245 6777766544
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.89 E-value=1.9e-09 Score=105.36 Aligned_cols=193 Identities=12% Similarity=-0.006 Sum_probs=121.7
Q ss_pred CccEEEEEcCCc--chhHHHHHHHHHcCCceeecc------------------------------------cc-------
Q 005818 383 PFLKFLIYGRTG--WIGGLLSKICEKKGIPFEYGK------------------------------------GR------- 417 (676)
Q Consensus 383 ~~~~vlitG~~G--~iG~~l~~~L~~~g~~v~~~~------------------------------------~D------- 417 (676)
+.|+++||||+| .||.++++.|+++|.+|.+.. .|
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE 86 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccc
Confidence 346899999987 899999999999998763321 11
Q ss_pred -------------CCChHHHHHHhhcc-----CCCEEEECccccC---CCCcchhccchhhHHhhhhhhHHHHHHHHHHc
Q 005818 418 -------------LENRSQLLADIQNV-----KPTHVFNAAGVTG---RPNVDWCETHKPETIRTNVVGTLTLADVCREN 476 (676)
Q Consensus 418 -------------l~d~~~~~~~~~~~-----~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~ 476 (676)
..+...++++++.+ ++|++||+||... .|-.+...++....+++|+.++..+.+++...
T Consensus 87 ~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 166 (297)
T d1d7oa_ 87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166 (297)
T ss_dssp GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHH
Confidence 11111222222221 5699999998631 11222334455677899999999999988764
Q ss_pred C---CcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc----CeEEEEeeecccCCCCCh
Q 005818 477 G---LLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD----NVCTLRVRMPISSDLNNP 549 (676)
Q Consensus 477 ~---~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~l~~~~~r~~~~~g~ 549 (676)
- ...++++++..... .......|+.+|...+.+.+.+. ..+++|+-.+.|+.+..+
T Consensus 167 ~~~~g~~~~~~~~~~~~~-----------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~ 229 (297)
T d1d7oa_ 167 MNPGGASISLTYIASERI-----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp EEEEEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred hhcCCcceeeeehhhccc-----------------ccccccceecccccccccccccchhccccceEEecccccccccch
Confidence 2 23444444432210 11233679999999988877642 235799999999988644
Q ss_pred H--------HHHHHHHhcCceeccCCCccchhhHHHHHHHHHhcC---CCc-eeEccCC
Q 005818 550 R--------NFITKISRYNKVVNIPNSMTILDELLPISVEMAKRN---LSG-IWNFTNP 596 (676)
Q Consensus 550 ~--------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~ 596 (676)
. .+........+ . +.+...+|++.+++.++... .+| ++.+.+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~P---l-gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 230 AAKAIGFIDTMIEYSYNNAP---I-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp CSSCCSHHHHHHHHHHHHSS---S-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhhhccCCHHHHHHHHhCCC---C-CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 2 23333332222 1 23567899999999998543 234 6777665
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.88 E-value=3e-09 Score=105.11 Aligned_cols=145 Identities=11% Similarity=0.053 Sum_probs=100.0
Q ss_pred cEEEEEc--CCcchhHHHHHHHHHcCCceeec------------------------------------------------
Q 005818 385 LKFLIYG--RTGWIGGLLSKICEKKGIPFEYG------------------------------------------------ 414 (676)
Q Consensus 385 ~~vlitG--~~G~iG~~l~~~L~~~g~~v~~~------------------------------------------------ 414 (676)
+.+|||| ++..||.++++.|+++|.+|.+.
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence 4799999 55799999999999999776331
Q ss_pred --------cccCCChHHHHHHhhcc-----CCCEEEECccccC---CCCcchhccchhhHHhhhhhhHHHHHHHHHHc--
Q 005818 415 --------KGRLENRSQLLADIQNV-----KPTHVFNAAGVTG---RPNVDWCETHKPETIRTNVVGTLTLADVCREN-- 476 (676)
Q Consensus 415 --------~~Dl~d~~~~~~~~~~~-----~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-- 476 (676)
..|+.+.+.++++++.+ ++|++||+||... .|-.+...++....+++|+.++..+++++..+
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~ 162 (329)
T d1uh5a_ 83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK 162 (329)
T ss_dssp CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence 12444544455444432 5799999998642 11122334556678899999999999988764
Q ss_pred -CCcEEEeecCeeeecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc----CeEEEEeeecccCCC
Q 005818 477 -GLLMMNYATGCIFEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD----NVCTLRVRMPISSDL 546 (676)
Q Consensus 477 -~~~~v~~sS~~v~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~----~~~~l~~~~~r~~~~ 546 (676)
+.++|.+||...... -+.+...|+.+|...|.+++.+. ..+++|+-.+.|+.+
T Consensus 163 ~~GsIv~iss~~~~~~-----------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 163 PQSSIISLTYHASQKV-----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp EEEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred cccccccceeehhccc-----------------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 346777776543210 01223579999999999998863 235899999998865
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.82 E-value=7.3e-09 Score=99.77 Aligned_cols=193 Identities=11% Similarity=0.013 Sum_probs=117.9
Q ss_pred CccEEEEEcCCc--chhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhcc-----C
Q 005818 383 PFLKFLIYGRTG--WIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNV-----K 432 (676)
Q Consensus 383 ~~~~vlitG~~G--~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~-----~ 432 (676)
+.+++|||||+| .||.++++.|+++|++| .....|+++.+.+.++++.+ +
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 83 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 83 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence 457999999887 79999999999999876 45567888888777766543 6
Q ss_pred CCEEEECccccCCCCcc-hh-ccchhhH---HhhhhhhHHHHHHHHHHcC--CcEEEeecC-eeeecCCCCCCCCCCCcc
Q 005818 433 PTHVFNAAGVTGRPNVD-WC-ETHKPET---IRTNVVGTLTLADVCRENG--LLMMNYATG-CIFEYDAKHPEGTGIGFK 504 (676)
Q Consensus 433 ~d~Vih~a~~~~~~~~~-~~-~~~~~~~---~~~Nv~g~~~ll~a~~~~~--~~~v~~sS~-~v~~~~~~~~~~~~~~~~ 504 (676)
+|++||+++........ .. ....... ...+..+...+.....+.. ...++++|+ ....
T Consensus 84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-------------- 149 (274)
T d2pd4a1 84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-------------- 149 (274)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS--------------
T ss_pred CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc--------------
Confidence 89999999965211111 11 1111122 2223333444444443322 233333333 2221
Q ss_pred ccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH--------HHHHHHHhcCceeccCCCccchh
Q 005818 505 EEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTILD 573 (676)
Q Consensus 505 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~ 573 (676)
+......|+.+|...+.+++... ...++|+-.+.|+.+.-+. .+........ ...-+...+
T Consensus 150 ----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~----p~~r~~~pe 221 (274)
T d2pd4a1 150 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINA----PLRKNVSLE 221 (274)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS----TTSSCCCHH
T ss_pred ----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhh----hccCCcCHH
Confidence 12333679999999999988753 2357889999998877442 1111111111 112456799
Q ss_pred hHHHHHHHHHhcC---CCc-eeEccCCC
Q 005818 574 ELLPISVEMAKRN---LSG-IWNFTNPG 597 (676)
Q Consensus 574 D~a~~~~~~~~~~---~~g-~yn~~~~~ 597 (676)
|+|.+++.++... .+| ++.+.+|-
T Consensus 222 dIA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 222 EVGNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhChhhCCCcCceEEECCCh
Confidence 9999999988653 345 77777764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.71 E-value=6e-08 Score=92.76 Aligned_cols=192 Identities=15% Similarity=0.081 Sum_probs=116.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce--------------------------eeccccCCC----hHHHHHHhhcc----
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF--------------------------EYGKGRLEN----RSQLLADIQNV---- 431 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v--------------------------~~~~~Dl~d----~~~~~~~~~~~---- 431 (676)
..+||||++.||.++++.|+++|++| ..+..|+.+ .+.+.++++..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999865 222333332 33344433321
Q ss_pred -CCCEEEECccccCCCC-cch-----------hccchhhHHhhhhhhHHHHHHHHHHcC----------CcEEEeecCee
Q 005818 432 -KPTHVFNAAGVTGRPN-VDW-----------CETHKPETIRTNVVGTLTLADVCRENG----------LLMMNYATGCI 488 (676)
Q Consensus 432 -~~d~Vih~a~~~~~~~-~~~-----------~~~~~~~~~~~Nv~g~~~ll~a~~~~~----------~~~v~~sS~~v 488 (676)
++|++||+||...... ... ........+..|+.+...........- ..++.++|...
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T d1mxha_ 83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 162 (266)
T ss_dssp SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence 5799999999652100 000 011223445667777666666554431 12222222211
Q ss_pred eecCCCCCCCCCCCccccCCCCCCCCchhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChH----HHHHHHHhcCc
Q 005818 489 FEYDAKHPEGTGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR----NFITKISRYNK 561 (676)
Q Consensus 489 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~----~~~~~~~~~~~ 561 (676)
. .+.+....|+.||...+.+.+.+. ...++|+..+.|+.+.-+. .+...+.+.-
T Consensus 163 ~------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~- 223 (266)
T d1mxha_ 163 D------------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV- 223 (266)
T ss_dssp G------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTC-
T ss_pred c------------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcC-
Confidence 1 122334679999999999988863 2457999999998876442 3434333322
Q ss_pred eeccCCCccchhhHHHHHHHHHhcC---CCc-eeEccCCCc
Q 005818 562 VVNIPNSMTILDELLPISVEMAKRN---LSG-IWNFTNPGV 598 (676)
Q Consensus 562 ~~~~~~~~~~v~D~a~~~~~~~~~~---~~g-~yn~~~~~~ 598 (676)
..+.-+...+|++.+++.++... .+| ++++.+|-.
T Consensus 224 --pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 224 --PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp --TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 22233457899999999999654 345 777777643
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.67 E-value=7.1e-09 Score=98.86 Aligned_cols=205 Identities=13% Similarity=0.045 Sum_probs=113.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec-------cccCCChHHHHHHhhcc------CCCEEEECccccCCCCcch
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG-------KGRLENRSQLLADIQNV------KPTHVFNAAGVTGRPNVDW 450 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~-------~~Dl~d~~~~~~~~~~~------~~d~Vih~a~~~~~~~~~~ 450 (676)
|+.|+||||++.||++++++|+++|++|... ..|+.+.+......... .+|.++|+|+.. .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~---~--- 74 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG---P--- 74 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC---T---
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCC---C---
Confidence 5678999999999999999999999998433 24666655544433221 479999999865 1
Q ss_pred hccchhhHHhhhhhhHHHHHHHHHH----cCC-cEEEeecCeee-ecCCCCCCCC----CC--Cc--cccCC-CCCCCCc
Q 005818 451 CETHKPETIRTNVVGTLTLADVCRE----NGL-LMMNYATGCIF-EYDAKHPEGT----GI--GF--KEEDK-PNFTGSF 515 (676)
Q Consensus 451 ~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~-~~v~~sS~~v~-~~~~~~~~~~----~~--~~--~~e~~-~~~p~~~ 515 (676)
..........+|..+...+.+.... ... ....+++...+ ......+... +. .. ..... +..+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~ 154 (257)
T d1fjha_ 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHH
Confidence 1223345567788888777665433 222 23333322111 0000000000 00 00 00000 1111235
Q ss_pred hhhhHHHHHHHHHHcc---CeEEEEeeecccCCCCChHHHHHHHHhcCc----ee---ccCCCccchhhHHHHHHHHHhc
Q 005818 516 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK----VV---NIPNSMTILDELLPISVEMAKR 585 (676)
Q Consensus 516 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~---~~~~~~~~v~D~a~~~~~~~~~ 585 (676)
|+.||...+.+.+.+. ...++|+-.+-|+.+..|. ......... .. ...+-+...+|++.+++.++..
T Consensus 155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~ 232 (257)
T d1fjha_ 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL--LQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSP 232 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTTSCCCTHHHHHHHHHHTSG
T ss_pred HHHHhhhhhccccccccccccccccccccccCCcCChh--HHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999874 2357999999998886542 111111111 00 0112355789999999998854
Q ss_pred C---CCc-eeEccCC
Q 005818 586 N---LSG-IWNFTNP 596 (676)
Q Consensus 586 ~---~~g-~yn~~~~ 596 (676)
. .+| ++.+.+|
T Consensus 233 ~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 233 AASYVHGAQIVIDGG 247 (257)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhCCccCceEEeCCC
Confidence 3 345 6666554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.64 E-value=1.1e-09 Score=99.09 Aligned_cols=84 Identities=8% Similarity=0.014 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
.++.|+||||||+|.||+.+++.|+++ +.+|++.+|...... .+.. .....++....+|+.|.+.+.+++ .++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~i 93 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQ--AAADSVNKRFKVNVTAAETADDASRAEAV--KGA 93 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHH--HHHHHHHHHHTCCCEEEECCSHHHHHHHT--TTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHH--HHHHHHHhccchhhhhhhcccHHHHHHHh--cCc
Confidence 357899999999999999999999999 688999988643211 0000 011234567889999999999998 789
Q ss_pred CEEEEccccCC
Q 005818 83 DTIMHFAAQTH 93 (676)
Q Consensus 83 d~Vih~a~~~~ 93 (676)
|+|||+|+...
T Consensus 94 Dilin~Ag~g~ 104 (191)
T d1luaa1 94 HFVFTAGAIGL 104 (191)
T ss_dssp SEEEECCCTTC
T ss_pred CeeeecCcccc
Confidence 99999998753
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.47 E-value=3e-08 Score=89.28 Aligned_cols=84 Identities=11% Similarity=0.077 Sum_probs=63.9
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCce-----------------------eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPF-----------------------EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v-----------------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
+.++|+||||+|.||+.+++.|+++|.+| ....+|+.|.+++++++.++ |+|||+
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i--Dilin~ 99 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA--HFVFTA 99 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC--SEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc--Ceeeec
Confidence 34699999999999999999999999765 55678999999999999887 999999
Q ss_pred ccccCCCCcchhccchhhHHhhhhhhHHHHHH
Q 005818 440 AGVTGRPNVDWCETHKPETIRTNVVGTLTLAD 471 (676)
Q Consensus 440 a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~ 471 (676)
||.. ......++....+.+|+.+..+...
T Consensus 100 Ag~g---~~~~~~e~~~~~~~~nv~~~~~~~~ 128 (191)
T d1luaa1 100 GAIG---LELLPQAAWQNESSIEIVADYNAQP 128 (191)
T ss_dssp CCTT---CCCBCHHHHHTCTTCCEEEECCCSS
T ss_pred Cccc---cccCCHHHHHhhhcceeehhHhhHH
Confidence 9854 2222233344455666666655443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.03 E-value=1.3e-05 Score=67.07 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=78.5
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
||.|+||+|.+|++++-.|..++.--+++++|..........+.......... .-+ ......+.+ .++|+||-+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~---~~~-~~~~~~~~~--~~aDivVit 75 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK---GYL-GPEQLPDCL--KGCDVVVIP 75 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE---EEE-SGGGHHHHH--TTCSEEEEC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC---eEE-cCCChHHHh--CCCCEEEEC
Confidence 79999999999999999999987666888888754322222222111111111 112 233444555 799999999
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
||.... ..++-.+++..|+.-.+.+++.+.++++ +-++.+-|
T Consensus 76 ag~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p-~~iiivvt 117 (144)
T d1mlda1 76 AGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCP-DAMICIIS 117 (144)
T ss_dssp CSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECS
T ss_pred CCcCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCC-CeEEEEec
Confidence 997542 2334557889999999999999999874 44454444
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.73 E-value=0.00014 Score=60.62 Aligned_cols=117 Identities=14% Similarity=0.016 Sum_probs=75.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHc-CCCcEEEEEcCCCccc-cccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGN-YPEYKIVVLDKLDYCS-NLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|||.|+|++|.+|++++-.|..+ +...++.++|..+... ...++........... ...-.+.+ .+ .+.|+|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~----~~--~~aDvv 73 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDATP----AL--EGADVV 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHH----HH--TTCSEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCcc----cc--CCCCEE
Confidence 68999999999999999888654 5567899988743210 0001111111111222 22222333 34 689999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|-+||...- ..++-.+++..|..-...+.+.+.++++-..+|.+|.
T Consensus 74 vitaG~~~k--~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 74 LISAGVRRK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp EECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EECCCccCC--CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 999997642 2345557889999999999999998874445666554
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.73 E-value=0.00012 Score=61.05 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=76.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc----CCCC--CCCCCCeEEEEecCCCHHHHHHHHccCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK----NLNP--SRLSPNFKFIKGDVASADLVHFILLTEK 81 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~----~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~~ 81 (676)
|||.|+||+|.+|+.++-.|+.++--.++.++|+.......+ .+.. ......++....--.|.++ + .+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----l--~~ 74 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----I--DE 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----G--TT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----h--cc
Confidence 579999999999999999999986556898988754211111 1111 1122233333222223332 3 68
Q ss_pred CCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEE
Q 005818 82 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHV 131 (676)
Q Consensus 82 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~ 131 (676)
+|+||-+||.... .-++-.+++..|..-.+.+.+...++++ +.++.+
T Consensus 75 aDvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~-~~iivV 121 (145)
T d1hyea1 75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICD-TKIFVI 121 (145)
T ss_dssp CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEC
T ss_pred ceEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCC-CeEEEE
Confidence 9999999997542 2235568899999999999999988873 455444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.64 E-value=2e-05 Score=66.17 Aligned_cols=115 Identities=11% Similarity=0.161 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
+.+||.|+|+ |++|+.++-.|+.++-..+++++|+....... .++.. ...........+|. + .+ .++
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~--~~a 73 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DC--KDA 73 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GG--TTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----Hh--ccc
Confidence 3579999995 99999999999999766799999986422110 01110 01112234445553 2 23 789
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|+||.+|+..... ..+..+++..|+.-...+.+...+++ .+-++.+-|
T Consensus 74 divvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvt 121 (146)
T d1ez4a1 74 DLVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA 121 (146)
T ss_dssp SEEEECCCC------------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred cEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence 9999999876532 23445777899999999999999887 444554444
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.58 E-value=0.0002 Score=59.59 Aligned_cols=113 Identities=14% Similarity=0.160 Sum_probs=72.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCCC-CCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNPS-RLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
+||.|+|+ |.+|+.++-.|+.++...++.++|+....... .++... ..........+ +++ .+ .++|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~----~~--~~adi 71 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS----DV--KDCDV 71 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GG--TTCSE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH----Hh--CCCce
Confidence 58999997 99999999999999776799999976643221 111111 11223333333 222 23 78999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
|+-+|+.... ..++..+++..|+.-...+.+.+.++++-..|+.+|
T Consensus 72 vvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 72 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred EEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 9999987642 234566889999999999999999887433444443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.57 E-value=0.0002 Score=59.72 Aligned_cols=87 Identities=21% Similarity=0.208 Sum_probs=63.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCC----------------------ChHHHHHHhhccCCCEEEECcccc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE----------------------NRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~----------------------d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
||.|+||+|.+|+.++..|..++.-=+++-.|+. ...+..+.++++ |+||.+||..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~a--DivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGC--DVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTC--SEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCC--CEEEECCCcC
Confidence 7999999999999999999888851111111211 234455667777 9999999954
Q ss_pred CCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 444 GRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
.. ..++..+.+..|+.....+++.+.+++.+
T Consensus 80 ~~-----~g~sR~~ll~~N~~i~~~i~~~i~~~~p~ 110 (144)
T d1mlda1 80 RK-----PGMTRDDLFNTNATIVATLTAACAQHCPD 110 (144)
T ss_dssp CC-----TTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred CC-----CCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence 21 22345677899999999999999999753
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00034 Score=58.18 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=43.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcC--CCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNY--PEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g--~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|++|.|.||||++|+.+++.|+++. +-.+++.+.++...... ...... .....++.+.+.+ .++|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~----~~~~~~--~~~~~~~~~~~~~------~~~Di 68 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA----PSFGGT--TGTLQDAFDLEAL------KALDI 68 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC----CGGGTC--CCBCEETTCHHHH------HTCSE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc----ccccCC--ceeeecccchhhh------hcCcE
Confidence 4689999999999999999988763 34567666554321110 000111 1122334444332 58899
Q ss_pred EEEccc
Q 005818 85 IMHFAA 90 (676)
Q Consensus 85 Vih~a~ 90 (676)
||.++.
T Consensus 69 vF~a~~ 74 (146)
T d1t4ba1 69 IVTCQG 74 (146)
T ss_dssp EEECSC
T ss_pred EEEecC
Confidence 998874
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.41 E-value=0.0003 Score=58.21 Aligned_cols=114 Identities=12% Similarity=0.062 Sum_probs=77.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc----ccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN----LKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
.||.|+||+|.+|+.++-.|+.++...++.++|....... ..++.. .......+...+|. ++ + .++
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~--~~a 71 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----T--AGS 71 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----G--TTC
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----h--hhc
Confidence 4799999999999999999999987778999885322111 111111 01123344444443 32 3 689
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
|+|+-+|+.... ..++-.+++..|..-.+.+.+...++++-..++.+|
T Consensus 72 DiVvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 72 DVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred CEEEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 999999997542 334566899999999999999999887434455444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.39 E-value=0.00046 Score=57.85 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=76.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCC--CCCCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLN--PSRLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
.+||.|+|| |++|+.++-.|+.++...++.++|+....... .++. .......+.....|. + .+ .++
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~----~l--~da 75 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D----DC--RDA 75 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G----GT--TTC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H----Hh--ccc
Confidence 568999996 99999999999999777799999986432111 0111 011122344444443 2 23 689
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
|+||.+|+.... ..+...+++..|+.-...+.+...++++-..|+.+|
T Consensus 76 Dvvvitag~~~~--~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 76 DLVVICAGANQK--PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp SEEEECCSCCCC--TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred eeEEEecccccc--cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 999999987652 223445778889999999999988887444555544
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00012 Score=61.04 Aligned_cols=82 Identities=13% Similarity=0.146 Sum_probs=52.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC-Cce----------------eeccccCC--ChHHHHHHhhccCCCEEEECccccC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG-IPF----------------EYGKGRLE--NRSQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g-~~v----------------~~~~~Dl~--d~~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
|+||.|.||||++|+.+++.|+++. +.+ .+...++. +..+. ..++++ |++|.+++..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~-~~~~~~--DivF~a~~~~- 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL-EALKAL--DIIVTCQGGD- 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH-HHHHTC--SEEEECSCHH-
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch-hhhhcC--cEEEEecCch-
Confidence 5689999999999999999888764 221 11111111 11111 235566 9999998621
Q ss_pred CCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecCeee
Q 005818 445 RPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATGCIF 489 (676)
Q Consensus 445 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~ 489 (676)
-...+...+.+.|.+.++++.++.|
T Consensus 77 --------------------~s~~~~~~~~~~g~~~~VID~Ss~f 101 (146)
T d1t4ba1 77 --------------------YTNEIYPKLRESGWQGYWIDAASSL 101 (146)
T ss_dssp --------------------HHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred --------------------HHHHhhHHHHhcCCCeecccCCccc
Confidence 1344566677788887788777666
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00094 Score=55.46 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=58.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-C--CceeeccccCCC-----------------------hHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKK-G--IPFEYGKGRLEN-----------------------RSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~-g--~~v~~~~~Dl~d-----------------------~~~~~~~~~~~~~d~Vih 438 (676)
|||.|+|++|.+|+.++-.|..+ + .++.++ |+.+ .... +.+++. |+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~--D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~a--Dvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLY--DIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGA--DVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEE--CSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTC--SEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEe--cccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCC--CEEEE
Confidence 69999999999999999887644 4 333222 3221 1112 245555 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 478 (676)
+||.... ..++..+.+..|..-...+.+.+.+++.
T Consensus 76 taG~~~k-----~g~~R~dl~~~N~~i~~~v~~~i~~~~p 110 (145)
T d2cmda1 76 SAGVRRK-----PGMDRSDLFNVNAGIVKNLVQQVAKTCP 110 (145)
T ss_dssp CCSCCCC-----TTCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCccCC-----CCcchhhHHHHHHHHHHHHHHHHHhhCC
Confidence 9995421 2345567789999999999999999875
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.28 E-value=7.8e-05 Score=61.69 Aligned_cols=72 Identities=19% Similarity=0.206 Sum_probs=54.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+|+|+|+ |.+|+.+++.|.+. ++.|+++++.+... +.+.. ..++..+.||..|++.+.++- -..+|.++-
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid~d~~~~--~~~~~---~~~~~vi~Gd~~~~~~l~~~~-i~~a~~vv~ 71 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKDIC--KKASA---EIDALVINGDCTKIKTLEDAG-IEDADMYIA 71 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHH--HHHHH---HCSSEEEESCTTSHHHHHHTT-TTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCCcceecCChhhh--hhhhh---hhhhhhccCcccchhhhhhcC-hhhhhhhcc
Confidence 68999997 99999999999999 78899998864211 11110 125788999999999998773 267888886
Q ss_pred c
Q 005818 88 F 88 (676)
Q Consensus 88 ~ 88 (676)
+
T Consensus 72 ~ 72 (132)
T d1lssa_ 72 V 72 (132)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.22 E-value=0.00085 Score=55.72 Aligned_cols=92 Identities=16% Similarity=0.087 Sum_probs=61.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCC-h---H----HHH--------------------HHhhccCCCEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN-R---S----QLL--------------------ADIQNVKPTHV 436 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d-~---~----~~~--------------------~~~~~~~~d~V 436 (676)
|||.|+||+|.+|+.++..|+.++.--+++-.|+.. . + ++. +.++++ |+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~a--DvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDES--DVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTC--SEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccc--eEE
Confidence 689999999999999999999888421222222211 0 0 111 233344 999
Q ss_pred EECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEe
Q 005818 437 FNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNY 483 (676)
Q Consensus 437 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~ 483 (676)
|-+||....| .++..+.+..|+.-...+++...+++-+.+++
T Consensus 79 VitAG~~~~~-----g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iiv 120 (145)
T d1hyea1 79 IITSGVPRKE-----GMSRMDLAKTNAKIVGKYAKKIAEICDTKIFV 120 (145)
T ss_dssp EECCSCCCCT-----TCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEecccccCC-----CCChhhhhhhhHHHHHHHHHHHhccCCCeEEE
Confidence 9999954221 23455778999999999999999887554444
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.21 E-value=0.0012 Score=56.68 Aligned_cols=118 Identities=16% Similarity=0.133 Sum_probs=73.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcC-----CCcEEEEEcCCCccccccCCC---CCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNY-----PEYKIVVLDKLDYCSNLKNLN---PSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-----~~~~v~~~~r~~~~~~~~~~~---~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
..+|.||||+|.||++++-.|++.. ....+.+++........+.+. .....+....+..--. ..+.+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~----~~~~~- 98 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGID----PYEVF- 98 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESC----HHHHT-
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccccc----chhhc-
Confidence 3489999999999999999998752 123566666544222111111 0112223333332212 22344
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEe
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RFIHVS 132 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~S 132 (676)
.+.|+||-+|+... ...+...+++..|..-.+.+.+++.++.+-. +++.+|
T Consensus 99 -~~aDvVvi~ag~~r--kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 99 -EDVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp -TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -cCCceEEEeeccCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 79999999998764 3445667899999999999999999875323 344444
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.17 E-value=0.00095 Score=55.49 Aligned_cols=114 Identities=16% Similarity=0.065 Sum_probs=75.0
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--CC--CCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--PS--RLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
|||.|+|| |.+|+.++..|+..+-..++.++|..........+. .. ......+.... .|.+ .+ .++|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~--~dad 71 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DT--ANSD 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GG--TTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----Hh--cCCe
Confidence 58999996 999999999999997667999999865332211111 10 11223333322 2232 23 7899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
+|+-+||.... ...+-.+.+..|..-...+.+.+.++++ +-++.+-|
T Consensus 72 vvvitag~~~~--~g~~r~~l~~~N~~i~~~i~~~i~~~~p-~aivivvt 118 (142)
T d1guza1 72 IVIITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIVVS 118 (142)
T ss_dssp EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEECC
T ss_pred EEEEEEecCCC--CCCchHHHHHHHHHHHHHHHHHhhccCC-CeEEEEec
Confidence 99999987542 2334567889999999999999988873 44444433
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.17 E-value=0.00094 Score=55.31 Aligned_cols=114 Identities=10% Similarity=0.117 Sum_probs=75.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc--CCCCC-CCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK--NLNPS-RLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~-~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.||.|+|+ |.+|++++-.|+.++-..+++++|........+ ++... ........... .+.++ + .++|+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~--~daDv 72 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C--RDADM 72 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G--TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----h--hCCcE
Confidence 58999996 999999999999998777999999865322111 11110 01112233322 22222 2 68899
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
||-+||.... .-++..+++..|..-...+.+.+.++++-..++.+|
T Consensus 73 VVitaG~~~~--~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 73 VVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEecccccC--CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999997652 234556889999999999999998887333444444
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.15 E-value=0.00026 Score=59.96 Aligned_cols=86 Identities=10% Similarity=0.043 Sum_probs=59.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-----e--eeccc-----------------------cCCChHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-----F--EYGKG-----------------------RLENRSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-----v--~~~~~-----------------------Dl~d~~~~~~~~~~~~~d 434 (676)
|||.|+||+|++|+.++..|+..+.- + ..+.. .+.......+.++++ |
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--d 82 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA--D 82 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC--S
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccc--c
Confidence 79999999999999999999876630 1 00000 011112234566666 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG 477 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~ 477 (676)
+||-+||.... ...+..+.+..|+.-...+.+.+.++.
T Consensus 83 vViitaG~~~~-----pg~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 83 YALLVGAAPRK-----AGMERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp EEEECCCCCCC-----TTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEeecCcCCC-----CCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999996522 234455778999999999999999864
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.08 E-value=0.00037 Score=57.39 Aligned_cols=53 Identities=21% Similarity=0.237 Sum_probs=41.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce-------------------eeccccCCChHHHHHH-hhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF-------------------EYGKGRLENRSQLLAD-IQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v-------------------~~~~~Dl~d~~~~~~~-~~~~~~d~Vih~a 440 (676)
|+|+|+|+ |.+|+.|++.|.+.|++| ..+.||.+|++.++++ ++.+ |.++-+.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a--~~vv~~t 73 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDA--DMYIAVT 73 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTC--SEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhh--hhhcccC
Confidence 78999996 999999999999999865 5566777777777766 4444 7777653
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.07 E-value=0.00034 Score=58.07 Aligned_cols=113 Identities=15% Similarity=0.102 Sum_probs=75.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCC--C-CCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLN--P-SRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
|||.|+|+ |.+|+.++-.|+.++-..++.++|........+.+. . ...........+| .++ + .++|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~----~--~~adi 70 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD----L--KGSDV 70 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG----G--TTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH----h--cCCCE
Confidence 58999996 999999999999997667999999764322111110 0 0112234444333 222 3 68999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
||-+|+.... ....-.+++..|..-...+.+...+.++ +-++.+-|
T Consensus 71 vvitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p-~aivivvt 116 (140)
T d1a5za1 71 VIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVT 116 (140)
T ss_dssp EEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECS
T ss_pred EEEecccccC--CCcchhhhhccccchHHHHHHHHHhcCC-CcEEEEeC
Confidence 9999987653 2234557888899999999999998874 44444444
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.02 E-value=0.0018 Score=54.47 Aligned_cols=116 Identities=11% Similarity=0.084 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc--CCCC--CCCCCCeEEEEecCCCHHHHHHHHccC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK--NLNP--SRLSPNFKFIKGDVASADLVHFILLTE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~ 80 (676)
.+.+||.|+|+ |.+|+.++-.|+.++.--+++++|........+ ++.. ........... .|+++ + .
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~----~--~ 87 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSV----T--A 87 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGG----G--T
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhh----c--c
Confidence 44679999996 999999999999998777999999864322111 1111 11111222222 23332 2 7
Q ss_pred CCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 81 KIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 81 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
++|+|+..|+..... -++-.+++..|+.-.+.+.....+.++-.-++.+|
T Consensus 88 ~adiVVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 88 NSKIVVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp TCSEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cccEEEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 899999999986532 23445788899999999999988877433455555
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.98 E-value=0.0021 Score=55.13 Aligned_cols=93 Identities=9% Similarity=-0.021 Sum_probs=63.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-----CceeeccccCCC-------------------------hHHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKG-----IPFEYGKGRLEN-------------------------RSQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g-----~~v~~~~~Dl~d-------------------------~~~~~~~~~~~~~d 434 (676)
.||.||||+|.||+.|+-.|+... ..+...-.|+.. .....+.++++ |
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~a--D 102 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV--D 102 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC--S
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCC--c
Confidence 489999999999999999888743 123333233221 11123445555 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcC---CcEEEee
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENG---LLMMNYA 484 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~---~~~v~~s 484 (676)
+||-+||... ...+...+.+..|+.-...+.+++.++. ++++++|
T Consensus 103 vVvi~ag~~r-----kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 103 WALLIGAKPR-----GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp EEEECCCCCC-----CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred eEEEeeccCC-----CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 9999999542 2234556788999999999999999974 4444543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.97 E-value=0.0012 Score=55.73 Aligned_cols=118 Identities=14% Similarity=0.062 Sum_probs=71.8
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCC-C----cEEEEEcCCCccccccCC---CCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYP-E----YKIVVLDKLDYCSNLKNL---NPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~-~----~~v~~~~r~~~~~~~~~~---~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
.+||.|+||+|++|++++-.|...+. + ....+++........+.. ...........+...-.+. +.+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 78 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VAF- 78 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HHT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----hhc-
Confidence 46999999999999999999998742 1 112222221111111000 0111223444444443333 344
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEe
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RFIHVS 132 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~S 132 (676)
.+.|+||-+||... ...++..+++..|+.-.+.+.+.+.+..+.. .++.+|
T Consensus 79 -~~advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 -KDADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp -TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -ccccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 79999999999865 2345666889999999999999988864223 344444
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0012 Score=51.83 Aligned_cols=69 Identities=12% Similarity=0.176 Sum_probs=54.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
..||.|.| .|.||+-++....+. ++++++++.....+.. .-.-+++.+|..|.+.+.++....++|+|-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~l--G~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRL--GVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTT--TCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHC--CCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 36899999 599999999999998 7889999886543221 112367889999999999887556789885
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.88 E-value=0.0014 Score=55.20 Aligned_cols=117 Identities=19% Similarity=0.125 Sum_probs=71.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc--CCCCC--CCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK--NLNPS--RLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++||.|+|+ |.+|+.++-.|...+. .+++++|........+ .+... ....... +.+.- ..++.+ .+.
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~-~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~~----~~~~~~--~~a 77 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEY----SYEAAL--TGA 77 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEEC----SHHHHH--TTC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCC-ceEEEEEeccccchhHHHHHhhhccccCCeeE-EeccC----chhhhh--cCC
Confidence 479999997 9999999988888853 4888988754321111 00000 0011111 11111 123344 789
Q ss_pred CEEEEccccCCcCC---cCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 83 DTIMHFAAQTHVDN---SFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 83 d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|+|+-+|+...... ....-.+++..|+.-...+++.+.++++ +-++.+-|
T Consensus 78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p-~aiviivs 130 (154)
T d1pzga1 78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP-KTFIIVVT 130 (154)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECC
T ss_pred CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCC-CcEEEEeC
Confidence 99999998765321 1123446788999999999999998884 44444444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.87 E-value=0.0022 Score=53.31 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=56.1
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH------HHH----------------HHhhccCCCEEEECc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS------QLL----------------ADIQNVKPTHVFNAA 440 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~------~~~----------------~~~~~~~~d~Vih~a 440 (676)
..|||.|.|+ |++|+.++..|+.+|.--+++-.|+.... ++. +.+.++ |+||.+|
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~a--divvita 80 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDA--DLVVITA 80 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTC--SEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccc--cEEEEec
Confidence 3579999995 99999999999999842222333332110 000 123444 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
|... .......+....|+.-...+++.+.+++.+
T Consensus 81 g~~~-----~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~ 114 (146)
T d1ez4a1 81 GAPQ-----KPGESRLDLVNKNLNILSSIVKPVVDSGFD 114 (146)
T ss_dssp CC---------------CHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccc-----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 8542 112344566789999999999999998754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.87 E-value=0.001 Score=56.11 Aligned_cols=117 Identities=11% Similarity=0.038 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccc--cCCCC--CCCCCCeEEEEecCCCHHHHHHHHcc
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNL--KNLNP--SRLSPNFKFIKGDVASADLVHFILLT 79 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~ 79 (676)
.|+..||.|+|+ |.+|++++-.|+.++...+++++|+....... .++.. ............| .++ +
T Consensus 16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~----~-- 85 (159)
T d2ldxa1 16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNV----S-- 85 (159)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGG----G--
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhh----h--
Confidence 356678999995 99999999999999877799999986432211 11111 1112222222233 322 2
Q ss_pred CCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Q 005818 80 EKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVS 132 (676)
Q Consensus 80 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~S 132 (676)
.++|+||-+|+..... .++-.++++.|+.-...+.....++++-..++.+|
T Consensus 86 ~~adivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 86 ANSKLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp TTEEEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ccccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 6889999999876532 22333567889999999998888777434455544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.86 E-value=0.0031 Score=52.95 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=64.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCC-------------------------hHHHHHHhhccCCCEEEE
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN-------------------------RSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d-------------------------~~~~~~~~~~~~~d~Vih 438 (676)
++||.|+|+ |.+|+.++..|...+.. +.+-.|+.. ....+++++++ |+||-
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~a--diVvi 82 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGA--DCVIV 82 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTC--SEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCC--CeEEE
Confidence 469999996 99999999888888852 233333321 11233456666 99999
Q ss_pred CccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEe
Q 005818 439 AAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNY 483 (676)
Q Consensus 439 ~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~ 483 (676)
+|+....|.-........+....|+.-...+++.+.+++.+-+++
T Consensus 83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivi 127 (154)
T d1pzga1 83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127 (154)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEE
Confidence 999653332112223445678899999999999999988643333
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.80 E-value=0.00086 Score=54.31 Aligned_cols=73 Identities=18% Similarity=0.303 Sum_probs=52.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVV 464 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~ 464 (676)
|||.|.|++|-+|+.+.+.+.++++++... .|....+ .++ ++|+||.+..+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~-id~~~~~----~~~--~~DVvIDFS~p~--------------------- 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK-VDVNGVE----ELD--SPDVVIDFSSPE--------------------- 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EETTEEE----ECS--CCSEEEECSCGG---------------------
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE-ECCCcHH----Hhc--cCCEEEEecCHH---------------------
Confidence 689999999999999999999999876432 2322221 233 359999986522
Q ss_pred hHHHHHHHHHHcCCcEEEeec
Q 005818 465 GTLTLADVCRENGLLMMNYAT 485 (676)
Q Consensus 465 g~~~ll~a~~~~~~~~v~~sS 485 (676)
++...++.|.++++++|.=+|
T Consensus 53 ~~~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 53 ALPKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp GHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEEcC
Confidence 356789999999988665444
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.80 E-value=0.00094 Score=58.25 Aligned_cols=74 Identities=19% Similarity=0.232 Sum_probs=53.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
.|+|||.|| |++|+++++.|.++ +++|++.+|...... .+.. ..........+..+.......+ ...|.++
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~v~dr~~~~a~--~l~~--~~~~~~~~~~~~~~~~~~~~~i--~~~~~~i 72 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVTVACRTLESAK--KLSA--GVQHSTPISLDVNDDAALDAEV--AKHDLVI 72 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTT--TCEEEEEESCHHHHH--HHHT--TCTTEEEEECCTTCHHHHHHHH--TTSSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECChHHHH--HHHh--cccccccccccccchhhhHhhh--hccceeE
Confidence 489999986 99999999999999 678999999754322 1111 1234555566777777777777 6778888
Q ss_pred Ecc
Q 005818 87 HFA 89 (676)
Q Consensus 87 h~a 89 (676)
.+.
T Consensus 73 ~~~ 75 (182)
T d1e5qa1 73 SLI 75 (182)
T ss_dssp ECS
T ss_pred eec
Confidence 654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.73 E-value=0.0011 Score=55.01 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=71.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccC--CCC--CCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN--LNP--SRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~--~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
|||.|+|+ |++|+.++-.|+.++-..+++++|........+. +.. ............| +++ + .++|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l--~~ad 71 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----L--ADAD 71 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----G--TTCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----h--cccc
Confidence 78999995 9999999999999975668999987643211111 110 0112223333333 332 3 6899
Q ss_pred EEEEccccCCcCC--cCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 84 TIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 84 ~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
+||-+||...... ...+-.+++..|+.-...+.+..++.++ +-++.+-|
T Consensus 72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p-~aivivvt 122 (146)
T d1hyha1 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVIS 122 (146)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCC-CeEEEEec
Confidence 9999998754211 1112235678899999999999988873 44444444
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.70 E-value=0.00058 Score=56.83 Aligned_cols=36 Identities=22% Similarity=0.365 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcC-CCcEEEEEcC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNY-PEYKIVVLDK 41 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~r 41 (676)
++++|.|.|||||+|+.|++.|.++. +..++..+..
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 35799999999999999999998753 5667766544
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.69 E-value=0.0016 Score=54.90 Aligned_cols=118 Identities=18% Similarity=0.114 Sum_probs=70.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcC-----CCcEEEEEcCCCccccccCCCC---CCCCCCeEEEEecCCCHHHHHHHH
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNY-----PEYKIVVLDKLDYCSNLKNLNP---SRLSPNFKFIKGDVASADLVHFIL 77 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-----~~~~v~~~~r~~~~~~~~~~~~---~~~~~~v~~v~~Dl~d~~~~~~~~ 77 (676)
+.+||.|+||+|.+|++++-.|+..+ ....+.+++........+.+.. .........+..--.+. +.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE----IAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----HHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----ccc
Confidence 45799999999999999999998652 1235666665432222111110 11122333333322222 334
Q ss_pred ccCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEE
Q 005818 78 LTEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHV 131 (676)
Q Consensus 78 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~ 131 (676)
.+.|+||-+++..... .++-.+++..|..-.+.+.+...++.+-.-++.+
T Consensus 78 --~~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iiv 127 (154)
T d5mdha1 78 --KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIV 127 (154)
T ss_dssp --TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEE
Confidence 7899999999886532 2233356788999999999888775323333333
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.68 E-value=0.0034 Score=51.68 Aligned_cols=87 Identities=14% Similarity=0.063 Sum_probs=61.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH--------HHH----------------HHhhccCCCEEEECcc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS--------QLL----------------ADIQNVKPTHVFNAAG 441 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~--------~~~----------------~~~~~~~~d~Vih~a~ 441 (676)
||.|+||+|.+|+.++-.|+.++.--+++-.|+.+.+ ++. +.+.+ .|+||-+||
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~--aDiVvitaG 79 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAG--SDVVVITAG 79 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTT--CSEEEECCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhh--cCEEEEecc
Confidence 7999999999999999999999863334444432111 111 11233 499999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
.... ..++..+.++.|..-...+.+..++++-+
T Consensus 80 ~~~~-----~g~~R~dl~~~N~~I~~~i~~~i~~~~p~ 112 (142)
T d1o6za1 80 IPRQ-----PGQTRIDLAGDNAPIMEDIQSSLDEHNDD 112 (142)
T ss_dssp CCCC-----TTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred cccc-----cCCchhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 5422 12345677899999999999999998753
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.68 E-value=0.0018 Score=53.58 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=73.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccC--CCC--CCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKN--LNP--SRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~--~~~--~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
|||.|+|+ |.+|+.++-.|+.++--.++.++|........+. +.. .......+.... .|.+ .+ .+.|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~--~~ad 71 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LL--KGSE 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GG--TTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH----Hh--cccc
Confidence 68999996 9999999999999875568999987643221111 100 001112222222 1222 23 7899
Q ss_pred EEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 84 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
+||-.|+.... .-.+..+++..|..-...+.+.+.++++ +.++.+-|
T Consensus 72 iVvitag~~~~--~g~~r~~l~~~n~~i~~~i~~~i~~~~p-~aivivvt 118 (142)
T d1ojua1 72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVT 118 (142)
T ss_dssp EEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECS
T ss_pred EEEEeccccCC--CCCchHHHHHHhhHHHHHHHHHHHhhCC-CcEEEEec
Confidence 99999986542 2345568889999999999999988773 44454444
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.65 E-value=0.00095 Score=55.50 Aligned_cols=26 Identities=27% Similarity=0.561 Sum_probs=23.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP 410 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~ 410 (676)
|+|.|.||||++|+.|++.|.+++|.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP 28 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFP 28 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 68999999999999999999877653
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.63 E-value=0.0024 Score=52.74 Aligned_cols=24 Identities=17% Similarity=0.356 Sum_probs=21.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
|||.|.|||||+|+.|++.|+++.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~ 24 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEER 24 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT
T ss_pred CEEEEECCccHHHHHHHHHHHhcC
Confidence 689999999999999999988754
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.57 E-value=0.0066 Score=50.11 Aligned_cols=86 Identities=17% Similarity=0.151 Sum_probs=57.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHH------------------------HHHHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ------------------------LLADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~------------------------~~~~~~~~~~d~Vih~a 440 (676)
|||.|+|| |.+|+.++..|+..+.-=+++-.|+..... -.+.++++ |+||-+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~da--dvvvita 77 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANS--DIVIITA 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTC--SEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCC--eEEEEEE
Confidence 68999996 999999999999988411222223321100 01234444 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 478 (676)
|....| .....+....|..-...+++.+.+++.
T Consensus 78 g~~~~~-----g~~r~~l~~~N~~i~~~i~~~i~~~~p 110 (142)
T d1guza1 78 GLPRKP-----GMTREDLLMKNAGIVKEVTDNIMKHSK 110 (142)
T ss_dssp SCCCCT-----TCCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred ecCCCC-----CCchHHHHHHHHHHHHHHHHHhhccCC
Confidence 954211 233456778999999999999998874
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.54 E-value=0.0071 Score=49.83 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=54.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcC--CCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNY--PEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g--~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|||.|.|||||.|+.|++.|+++. +..++..++.+...... ..... .. ....+..+.+. + .++|+|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~----~~~~~-~~-~~~~~~~~~~~----~--~~~Dvv 68 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA----PNFGK-DA-GMLHDAFDIES----L--KQLDAV 68 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC----CCSSS-CC-CBCEETTCHHH----H--TTCSEE
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc----cccCC-cc-eeeecccchhh----h--ccccEE
Confidence 589999999999999999998742 34566655443221111 11111 11 11123334333 3 688999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCc-eEEEEeccc
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIK-RFIHVSTDE 135 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~v~~SS~~ 135 (676)
|.+.... -+..+...+.+.+ .+ .+|=.||+.
T Consensus 69 F~alp~~------------------~s~~~~~~l~~~g-~~~~VIDlSsdf 100 (147)
T d1mb4a1 69 ITCQGGS------------------YTEKVYPALRQAG-WKGYWIDAASTL 100 (147)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTT-CCSEEEESSSTT
T ss_pred EEecCch------------------HHHHHhHHHHHcC-CceEEEeCCccc
Confidence 9876421 1345666666666 33 466667743
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.41 E-value=0.0097 Score=49.40 Aligned_cols=86 Identities=14% Similarity=0.185 Sum_probs=58.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH------HHH-----------------HHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS------QLL-----------------ADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~------~~~-----------------~~~~~~~~d~Vih~a~ 441 (676)
.||.|+|+ |.+|+.++..|+..+.--+++-.|+.... ++. +.++++ |+||.+|+
T Consensus 7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~da--Dvvvitag 83 (148)
T d1ldna1 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDA--DLVVICAG 83 (148)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTC--SEEEECCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccc--eeEEEecc
Confidence 58999996 99999999999998852223333332100 011 234444 99999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 478 (676)
... .......+....|+.-...+++.+++++.
T Consensus 84 ~~~-----~~~~~R~dl~~~N~~i~~~i~~~i~~~~p 115 (148)
T d1ldna1 84 ANQ-----KPGETRLDLVDKNIAIFRSIVESVMASGF 115 (148)
T ss_dssp CCC-----CTTTCSGGGHHHHHHHHHHHHHHHHHHTC
T ss_pred ccc-----ccCcchhHHHHHHHHHHHHHHHHHHhhCC
Confidence 542 12234457778999999999999999874
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.40 E-value=0.0078 Score=49.46 Aligned_cols=86 Identities=21% Similarity=0.201 Sum_probs=58.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHH----------------------HHHhhccCCCEEEECccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQL----------------------LADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~----------------------~~~~~~~~~d~Vih~a~~ 442 (676)
|||.|+|+ |.+|+.++..|+.++.--+++-.|+...... .+.++++ |+||-+||.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 77 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGS--DVVIVAAGV 77 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTC--SEEEECCCC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCC--CEEEEeccc
Confidence 68999996 9999999999998885223333333211000 1234455 999999996
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 478 (676)
...| .....+.+..|+.-...+++...+++.
T Consensus 78 ~~~~-----g~~r~dl~~~N~~I~~~i~~~i~~~~p 108 (140)
T d1a5za1 78 PQKP-----GETRLQLLGRNARVMKEIARNVSKYAP 108 (140)
T ss_dssp CCCS-----SCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ccCC-----CcchhhhhccccchHHHHHHHHHhcCC
Confidence 5221 233446678899999999999999874
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.31 E-value=0.0015 Score=53.70 Aligned_cols=72 Identities=8% Similarity=0.094 Sum_probs=52.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|+++|.|+ |.+|+.+++.|.+. +++|++++..... .+.+ ...+...+.+|.++++.+.++- -.++|.||=
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~--g~~vvvid~d~~~--~~~~----~~~~~~~~~gd~~~~~~l~~a~-i~~a~~vi~ 70 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRM--GHEVLAVDINEEK--VNAY----ASYATHAVIANATEENELLSLG-IRNFEYVIV 70 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESCHHH--HHHT----TTTCSEEEECCTTCTTHHHHHT-GGGCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCeEEEecCcHHH--HHHH----HHhCCcceeeecccchhhhccC-CccccEEEE
Confidence 57889975 99999999999999 5677777775422 1122 1335678889999999988772 267888775
Q ss_pred cc
Q 005818 88 FA 89 (676)
Q Consensus 88 ~a 89 (676)
+.
T Consensus 71 ~~ 72 (134)
T d2hmva1 71 AI 72 (134)
T ss_dssp CC
T ss_pred Ec
Confidence 44
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.31 E-value=0.0047 Score=51.89 Aligned_cols=85 Identities=9% Similarity=0.046 Sum_probs=58.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-----ceeeccccCCCh-------------------------HHHHHHhhccCCC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI-----PFEYGKGRLENR-------------------------SQLLADIQNVKPT 434 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~-----~v~~~~~Dl~d~-------------------------~~~~~~~~~~~~d 434 (676)
|||.|+||+|.+|+.++..|+..+. .+..+-.|+... ....+.++++ |
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d 81 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDL--D 81 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTC--S
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCc--e
Confidence 6999999999999999998876542 233333333211 1122445555 9
Q ss_pred EEEECccccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHc
Q 005818 435 HVFNAAGVTGRPNVDWCETHKPETIRTNVVGTLTLADVCREN 476 (676)
Q Consensus 435 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~ 476 (676)
+||-+||... ...+...+.+..|+.-...+.+.+.++
T Consensus 82 vVVitag~~~-----~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 82 VAILVGSMPR-----RDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEECCSCCC-----CTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccCC-----CCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 9999999552 122344466899999999999988776
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.30 E-value=0.0018 Score=56.45 Aligned_cols=109 Identities=17% Similarity=0.078 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
..+.+|||+||+|.+|..+++..... +.+|+..+++..... .+.. ......+..-|-...+.+.+.....++|+
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~--~~~~--~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~ 101 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIA--YLKQ--IGFDAAFNYKTVNSLEEALKKASPDGYDC 101 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHH--HHHH--TTCSEEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHH--HHHh--hhhhhhcccccccHHHHHHHHhhcCCCce
Confidence 34689999999999999999998888 689998887542111 1111 11111122223333444555556678999
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecccccCCC
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDEVYGET 140 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~vyg~~ 140 (676)
||++.+.. .....+++++..| +++.++..+.|+..
T Consensus 102 v~D~vG~~------------------~~~~~~~~l~~~G---~~v~~G~~~~~~~~ 136 (182)
T d1v3va2 102 YFDNVGGE------------------FLNTVLSQMKDFG---KIAICGAISVYNRM 136 (182)
T ss_dssp EEESSCHH------------------HHHHHGGGEEEEE---EEEECCCGGGTTCT
T ss_pred eEEecCch------------------hhhhhhhhccCCC---eEEeecceeecccc
Confidence 99988621 1233455555544 78877766665443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.29 E-value=0.0025 Score=55.23 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=27.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL 39 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~ 39 (676)
|+||.|.|||||.|+.|++.|.++ +.+++..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEee
Confidence 579999999999999999999886 47777554
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.28 E-value=0.0032 Score=52.99 Aligned_cols=55 Identities=22% Similarity=0.294 Sum_probs=43.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECcc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
.|+||.|.||.|.+|+.+++.|.+.||+|..+ |.......+...++. |.++.+.-
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~--d~~~~~~~~~~~~~~--~~v~~~~~ 62 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISIL--DREDWAVAESILANA--DVVIVSVP 62 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEE--CTTCGGGHHHHHTTC--SEEEECSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEec--ccccccccchhhhhc--cccccccc
Confidence 45689999999999999999999999998765 444445555666766 88888764
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.0057 Score=52.19 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=30.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCc
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDY 44 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~ 44 (676)
|||+|+|+ |.+|+.++..|.+. +++|.+++|...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~--G~~V~~~~r~~~ 34 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQ--GHEVQGWLRVPQ 34 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred CEEEEECc-CHHHHHHHHHHHHC--CCceEEEEcCHH
Confidence 68999997 99999999999999 688888888654
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.27 E-value=0.0017 Score=57.67 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||.|+||+|.+|++|++.|+++ +++|++.+|..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 67999999999999999999999 78888888854
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.27 E-value=0.0016 Score=56.56 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=24.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC-Cce
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG-IPF 411 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g-~~v 411 (676)
||||.|.|||||+|+.|++.|..+. .++
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei 29 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTI 29 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCce
Confidence 6899999999999999999999984 344
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.10 E-value=0.025 Score=45.39 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=61.1
Q ss_pred CCCCCCCeEEEEcCC---chhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHc
Q 005818 2 ATVYTPKNILITGAA---GFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILL 78 (676)
Q Consensus 2 ~~~~~~~~vlVtGat---G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~ 78 (676)
..++..++|.|+||| |..|..+.+.|.+.+ ..+|+.+...... . .++. ..-++.|.
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~--i---------~G~~-~y~sl~dl-------- 61 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEE--V---------QGVK-AYKSVKDI-------- 61 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSE--E---------TTEE-CBSSTTSC--------
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccc--c---------CCeE-eecchhhc--------
Confidence 456778999999999 999999999987654 6799988764311 0 1111 12233332
Q ss_pred cCCCCEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 79 TEKIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 79 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
...+|.++-+... ..+..+++.|.+.| ++.++.+|+
T Consensus 62 p~~vDlvvi~vp~------------------~~~~~~~~~~~~~g-~~~~vi~s~ 97 (129)
T d2csua1 62 PDEIDLAIIVVPK------------------RFVKDTLIQCGEKG-VKGVVIITA 97 (129)
T ss_dssp SSCCSEEEECSCH------------------HHHHHHHHHHHHHT-CCEEEECCC
T ss_pred CCCCceEEEecCh------------------HHhHHHHHHHHHcC-CCEEEEecc
Confidence 1578988755421 12455777777778 888888887
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.05 E-value=0.0041 Score=51.39 Aligned_cols=114 Identities=18% Similarity=0.109 Sum_probs=67.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCC--CCC--CCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNL--NPS--RLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++||.|+|+ |.+|+.++-.|+.++ -.+++++|..........+ ... ........... .|+++ + .+.
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~----~--~~a 70 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD----T--ANS 70 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG----G--TTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC-cceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH----h--cCC
Confidence 368999996 999999999998885 3488889875532211111 000 00111222211 12222 2 688
Q ss_pred CEEEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 83 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 83 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|+||-+|+.... ...+..+++..|+.-.+.+.+...++++ +-++.+-|
T Consensus 71 dvvvitag~~~~--~~~~r~dl~~~N~~i~~~i~~~i~k~~p-~aivivvt 118 (142)
T d1uxja1 71 DVIVVTSGAPRK--PGMSREDLIKVNADITRACISQAAPLSP-NAVIIMVN 118 (142)
T ss_dssp SEEEECCSCC-----------CHHHHHHHHHHHHHHHGGGCT-TCEEEECS
T ss_pred CEEEEeeeccCC--cCcchhHHHhHHHHHHHHHHHHHhccCC-CceEEEeC
Confidence 999999997652 1223346778899999999999988773 44444444
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.98 E-value=0.017 Score=47.40 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=58.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHH------HH------------------HHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ------LL------------------ADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~------~~------------------~~~~~~~~d~Vih~a 440 (676)
|||.|+|+ |.+|+.++-.|+.+|.-=+++-.|+..... +. +.++++ |+||-.|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~a--diVvita 77 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGS--EIIVVTA 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTC--SEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccc--cEEEEec
Confidence 68999995 999999999999888421223333321100 10 234444 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
|....| .....+....|..-...+.+.+.+++-+
T Consensus 78 g~~~~~-----g~~r~~l~~~n~~i~~~i~~~i~~~~p~ 111 (142)
T d1ojua1 78 GLARKP-----GMTRLDLAHKNAGIIKDIAKKIVENAPE 111 (142)
T ss_dssp CCCCCS-----SCCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred cccCCC-----CCchHHHHHHhhHHHHHHHHHHHhhCCC
Confidence 854222 2344567788999999999999998753
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.94 E-value=0.0018 Score=57.54 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=34.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQ 429 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~ 429 (676)
|||.|+||+|.+|++|++.|++.||+|.+... |++.++++.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R---~~e~~~~l~~ 42 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR---REEKAEAKAA 42 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES---SHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHH
Confidence 68999999999999999999999999987754 4555554443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.92 E-value=0.0058 Score=50.81 Aligned_cols=116 Identities=19% Similarity=0.136 Sum_probs=71.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccccc--CCCCC--CCCCCeEEEEecCCCHHHHHHHHccCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLK--NLNPS--RLSPNFKFIKGDVASADLVHFILLTEKI 82 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~--~~~~~v~~v~~Dl~d~~~~~~~~~~~~~ 82 (676)
++||.|+|+ |.+|++++-.|..++ -.++.++|+.......+ .+... ...........+ +.+ .+ .+.
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~-l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~----~~--~~a 72 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD----DL--AGA 72 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG----GG--TTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc----cc--CCC
Confidence 468999995 999999998777775 35888999755322111 11110 011122222222 222 22 689
Q ss_pred CEEEEccccCCcC-Cc--CCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 83 DTIMHFAAQTHVD-NS--FGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 83 d~Vih~a~~~~~~-~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|+|+-+++..... .+ ..+-.+++..|..-...+.+.+++.++ +-++.+-|
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p-~aivivvt 125 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCP-NAFIIVVT 125 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECS
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCC-CeEEEEec
Confidence 9999999976431 11 123446788999999999999998874 44444443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.88 E-value=0.021 Score=46.21 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=50.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcC-CceeeccccCCChHHHHHHhhccCCCEEEECccccCCCCcchhccchhhHHhhhhh
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKG-IPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHKPETIRTNVV 464 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g-~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~ 464 (676)
||.|.|++|-+|+.+++.+.+.. +++.. ..|..+.. . .+...++|+||.+..+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~-~~d~~~~~--~-~~~~~~~DvvIDFS~p~--------------------- 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSA-ELDAGDPL--S-LLTDGNTEVVIDFTHPD--------------------- 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEE-EECTTCCT--H-HHHTTTCSEEEECCCTT---------------------
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEecCCch--h-hhccccCCEEEEcccHH---------------------
Confidence 69999999999999999877654 44322 22443322 2 22333569999986532
Q ss_pred hHHHHHHHHHHcCCcEEEeec
Q 005818 465 GTLTLADVCRENGLLMMNYAT 485 (676)
Q Consensus 465 g~~~ll~a~~~~~~~~v~~sS 485 (676)
++...++.|.++++++|.=+|
T Consensus 56 ~~~~~~~~~~~~~~~~ViGTT 76 (135)
T d1yl7a1 56 VVMGNLEFLIDNGIHAVVGTT 76 (135)
T ss_dssp THHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEecc
Confidence 356678999999998766444
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.88 E-value=0.018 Score=46.14 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=49.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|||.|.|++|-.|+.+++.+.++ +++++.. ++.. . +.+ .++|+||
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~~~--------------------------~----~~~--~~~DVvI 46 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDVNG--------------------------V----EEL--DSPDVVI 46 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEETTE--------------------------E----EEC--SCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECCCc--------------------------H----HHh--ccCCEEE
Confidence 58999999999999999988877 5665543 2210 0 011 5689999
Q ss_pred EccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 87 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 87 h~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
.+..+. ++..+++.|.+++ ..+|.=+|
T Consensus 47 DFS~p~------------------~~~~~l~~~~~~~--~p~ViGTT 73 (128)
T d1vm6a3 47 DFSSPE------------------ALPKTVDLCKKYR--AGLVLGTT 73 (128)
T ss_dssp ECSCGG------------------GHHHHHHHHHHHT--CEEEECCC
T ss_pred EecCHH------------------HHHHHHHHHHhcC--CCEEEEcC
Confidence 886532 2577888888887 45554333
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.86 E-value=0.034 Score=45.95 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=60.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH--H----H------------------HHHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS--Q----L------------------LADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~--~----~------------------~~~~~~~~~d~Vih~a 440 (676)
+||.|.|+ |.+|+.++..|..++.. +++-.|+.... . + .+.+++ .|+||-+|
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~--advvvita 79 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAG--ADVVIVTA 79 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTT--CSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCC--CcEEEEec
Confidence 58999995 99999999877777742 44444543210 0 0 122333 49999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
+....|.......+....+..|+.-...+++.+++.+-+
T Consensus 80 g~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~ 118 (150)
T d1t2da1 80 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN 118 (150)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 965322211122345567899999999999999998753
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.85 E-value=0.0064 Score=49.71 Aligned_cols=53 Identities=26% Similarity=0.362 Sum_probs=42.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce------------------eeccccCCChHHHHHH-hhccCCCEEEECcc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF------------------EYGKGRLENRSQLLAD-IQNVKPTHVFNAAG 441 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v------------------~~~~~Dl~d~~~~~~~-~~~~~~d~Vih~a~ 441 (676)
+++|.| .|-+|+.+++.|.++|++| ..+.+|.++++.++++ ++++ |.||-+..
T Consensus 2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a--~~vi~~~~ 73 (134)
T d2hmva1 2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNF--EYVIVAIG 73 (134)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGC--SEEEECCC
T ss_pred EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccc--cEEEEEcC
Confidence 588887 5999999999999999876 5566788888888776 5665 87776654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.83 E-value=0.015 Score=51.88 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=53.3
Q ss_pred CCCCeEEEEcC----------------CchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCC
Q 005818 5 YTPKNILITGA----------------AGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA 68 (676)
Q Consensus 5 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 68 (676)
+.+++||||+| ||..|.+|++.+..+ |++|+++.-... ......+..+.. .
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~--Ga~V~li~g~~~---------~~~p~~~~~~~~--~ 70 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS---------LPTPPFVKRVDV--M 70 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC---------CCCCTTEEEEEC--C
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc--CCchhhhhcccc---------cCccccccccee--h
Confidence 56789999987 799999999999999 677777655321 122345665543 4
Q ss_pred CHHHHHHHHc--cCCCCEEEEccccCCc
Q 005818 69 SADLVHFILL--TEKIDTIMHFAAQTHV 94 (676)
Q Consensus 69 d~~~~~~~~~--~~~~d~Vih~a~~~~~ 94 (676)
..+++...+. ..++|++|++|++...
T Consensus 71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 71 TALEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred hhHHHHHHHHhhhccceeEeeeechhhh
Confidence 4444443331 1478999999999875
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.81 E-value=0.016 Score=49.90 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=25.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++|+|.|| |++|+.+++.|.++||+|.++.
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~d 32 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVAC 32 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEE
Confidence 58999985 9999999999999999874444
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.80 E-value=0.017 Score=43.54 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
++.|+|+|.|. |-.|.+++++|.++ +++|++.|..........+ .....+..+.. +... + .++|.
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~-----~~~~~~~~~~~-~~~~----~--~~~d~ 67 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKL-----PEAVERHTGSL-NDEW----L--MAADL 67 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGS-----CTTSCEEESBC-CHHH----H--HHCSE
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHH-----hhccceeeccc-chhh----h--ccCCE
Confidence 46789999986 88999999999999 6777888876543332222 23444555543 2222 2 46699
Q ss_pred EEEccccC
Q 005818 85 IMHFAAQT 92 (676)
Q Consensus 85 Vih~a~~~ 92 (676)
||---|..
T Consensus 68 vi~SPGi~ 75 (93)
T d2jfga1 68 IVASPGIA 75 (93)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
Confidence 98766653
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.76 E-value=0.043 Score=45.75 Aligned_cols=87 Identities=16% Similarity=0.025 Sum_probs=60.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHH------HH-----------------HHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ------LL-----------------ADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~------~~-----------------~~~~~~~~d~Vih~a~ 441 (676)
.||.|+|+ |.+|+.++-.|..+|.-=+++-.|+..... +. +.++++ |+||.+||
T Consensus 21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~a--diVVitAg 97 (160)
T d1i0za1 21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANS--KIVVVTAG 97 (160)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTC--SEEEECCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccc--cEEEEecC
Confidence 58999995 999999999999999632333334331110 11 223444 99999999
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
.... ..++..+....|+.-...+++..++.+.+
T Consensus 98 ~~~~-----~g~tR~~l~~~N~~i~~~i~~~i~~~~p~ 130 (160)
T d1i0za1 98 VRQQ-----EGESRLNLVQRNVNVFKFIIPQIVKYSPD 130 (160)
T ss_dssp CCCC-----TTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred Cccc-----cCcchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5521 12344567789999999999999998754
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.0092 Score=46.59 Aligned_cols=53 Identities=15% Similarity=0.289 Sum_probs=45.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce----------------eeccccCCChHHHHHHhhccCCCEEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF----------------EYGKGRLENRSQLLADIQNVKPTHVFN 438 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v----------------~~~~~Dl~d~~~~~~~~~~~~~d~Vih 438 (676)
.||.|.| +|.+|+-|+....+.|+++ .++.+|..|.+.+.++...+++|+|-.
T Consensus 12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 5899999 7999999999999999876 566788889999988887777788854
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=95.71 E-value=0.0054 Score=51.46 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++++|.|+||+|.+|+++++.|.++ +++|.+.++..
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~ 43 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDRED 43 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTC
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEeccccc
Confidence 34679999999999999999999999 67777777753
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.57 E-value=0.0058 Score=52.26 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=23.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
||||.|.||||++|+.|++.|.++.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP 25 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHP 25 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCC
Confidence 6899999999999999999998875
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.56 E-value=0.0034 Score=54.69 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHH---HccCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFI---LLTEKI 82 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~---~~~~~~ 82 (676)
.+.+|||+||+|.+|..+++.+... +.+|++.+++... .+.+... +... ..|..+++..+++ ....++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~--~~~l~~~----Ga~~-vi~~~~~~~~~~v~~~t~~~g~ 95 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAK--REMLSRL----GVEY-VGDSRSVDFADEILELTDGYGV 95 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHH--HHHHHTT----CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCCcccccchhhccc--cccceeeeccccc--ccccccc----cccc-cccCCccCHHHHHHHHhCCCCE
Confidence 4579999999999999999999888 6788887765321 1111111 2222 2355555433333 334679
Q ss_pred CEEEEccc
Q 005818 83 DTIMHFAA 90 (676)
Q Consensus 83 d~Vih~a~ 90 (676)
|+||.+.+
T Consensus 96 d~v~d~~g 103 (183)
T d1pqwa_ 96 DVVLNSLA 103 (183)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 99999887
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.50 E-value=0.04 Score=45.09 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=59.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHH------HH-----------------HHhhccCCCEEEECccc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ------LL-----------------ADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~------~~-----------------~~~~~~~~d~Vih~a~~ 442 (676)
||.|+|+ |.+|+.++..|+.++.-=+++-.|+..... +. +.++++ |+||-+||.
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~da--DvVVitaG~ 79 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDA--DMVVITAGP 79 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTC--SEEEECCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCC--cEEEEeccc
Confidence 7999996 999999999999998632333334332100 11 123444 999999996
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
...| .+...+.+..|+.-...+++.+++++-+
T Consensus 80 ~~~~-----g~~R~dl~~~N~~i~~~i~~~i~~~~p~ 111 (143)
T d1llda1 80 RQKP-----GQSRLELVGATVNILKAIMPNLVKVAPN 111 (143)
T ss_dssp CCCT-----TCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCC-----CCchhhhhhhhHHHHHHHHHHHHhhCCC
Confidence 5222 2344567899999999999999998753
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=95.46 E-value=0.024 Score=46.46 Aligned_cols=87 Identities=13% Similarity=0.056 Sum_probs=56.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCC----------------------hHHHHHHhhccCCCEEEECccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLEN----------------------RSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d----------------------~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
.||.|+|+ |.+|+.++-.|+.++.-=+++-.|+.. .....+.++++ |+||-+||.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 78 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDC--DVIVVTAGA 78 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTC--SEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCC--ceEEEeccc
Confidence 37999996 999999999999988511122222111 00011234555 999999995
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
.. ...+...+....|+.-...+++.+.+++.+
T Consensus 79 ~~-----~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ 110 (142)
T d1y6ja1 79 NR-----KPGETRLDLAKKNVMIAKEVTQNIMKYYNH 110 (142)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cc-----CcCcchhHHhhHHHHHHHHHHHHhhccCCC
Confidence 42 223445577899999999999999998754
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.39 E-value=0.0059 Score=52.44 Aligned_cols=98 Identities=13% Similarity=0.037 Sum_probs=56.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH-HHHHHHHccCCCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA-DLVHFILLTEKIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~~~~~~~~~~~d~V 85 (676)
..+|||+||+|.+|...++..... +.+|+...++...... ... . +...+ .|..+. +.........++|+|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~--~~~--l--Ga~~v-i~~~~~~~~~~~~~~~~gvD~v 102 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDY--LRV--L--GAKEV-LAREDVMAERIRPLDKQRWAAA 102 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHH--HHH--T--TCSEE-EECC---------CCSCCEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHH--HHh--c--cccee-eecchhHHHHHHHhhccCcCEE
Confidence 468999999999999999998888 6777777765422111 010 1 11111 133221 222233345689999
Q ss_pred EEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecc
Q 005818 86 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTD 134 (676)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~ 134 (676)
|...+-.. ....++.++.. .|++.++..
T Consensus 103 id~vgg~~------------------~~~~l~~l~~~---Griv~~G~~ 130 (176)
T d1xa0a2 103 VDPVGGRT------------------LATVLSRMRYG---GAVAVSGLT 130 (176)
T ss_dssp EECSTTTT------------------HHHHHHTEEEE---EEEEECSCC
T ss_pred EEcCCchh------------------HHHHHHHhCCC---ceEEEeecc
Confidence 99987432 23344455543 488877764
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.39 E-value=0.0063 Score=51.32 Aligned_cols=80 Identities=21% Similarity=0.200 Sum_probs=51.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC-Cceee---------ccccC-----------CChHHHHHHhhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG-IPFEY---------GKGRL-----------ENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g-~~v~~---------~~~Dl-----------~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
.|||.|.|++|-+|+.+++.+.+.. .++.. +.-|+ .-...++.+++.+ |+||.+.-+
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~--DViIDFs~p 81 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF--DVFIDFTRP 81 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC--SEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc--ceEEEeccH
Confidence 4799999999999999999998864 33210 11111 1111223344544 999987541
Q ss_pred cCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcEEEeecC
Q 005818 443 TGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLMMNYATG 486 (676)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~ 486 (676)
.++...++.|.++++++|.=+|.
T Consensus 82 ---------------------~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 82 ---------------------EGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp ---------------------HHHHHHHHHHHHTTCEEEECCCC
T ss_pred ---------------------HHHHHHHHHHHhccceeEEecCC
Confidence 23567789999999887765543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.38 E-value=0.033 Score=45.60 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=54.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHH------H------------------HHHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQ------L------------------LADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~------~------------------~~~~~~~~~d~Vih~a 440 (676)
+||.|+|+ |.+|+.++-.|+.++.- +.+-.|+..... + .+.+. +.|+||-+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~--~advvvita 77 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTA--NSDVIVVTS 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGT--TCSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhc--CCCEEEEee
Confidence 48999995 99999999999888742 333344432110 0 01223 349999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCc
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLL 479 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~ 479 (676)
|... .......+.+..|+.-...+++...+++.+
T Consensus 78 g~~~-----~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~ 111 (142)
T d1uxja1 78 GAPR-----KPGMSREDLIKVNADITRACISQAAPLSPN 111 (142)
T ss_dssp SCC--------------CHHHHHHHHHHHHHHHGGGCTT
T ss_pred eccC-----CcCcchhHHHhHHHHHHHHHHHHHhccCCC
Confidence 9542 112334466788999999999999988753
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.013 Score=52.23 Aligned_cols=58 Identities=17% Similarity=0.282 Sum_probs=43.4
Q ss_pred ccEEEEEcC----------------CcchhHHHHHHHHHcCCceeeccccCC-------------ChHH----HHHHhhc
Q 005818 384 FLKFLIYGR----------------TGWIGGLLSKICEKKGIPFEYGKGRLE-------------NRSQ----LLADIQN 430 (676)
Q Consensus 384 ~~~vlitG~----------------~G~iG~~l~~~L~~~g~~v~~~~~Dl~-------------d~~~----~~~~~~~ 430 (676)
.|+||||+| ||-.|.+|++.+..+|++|.++.+... ..++ +.+.+..
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~~~~ 85 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQ 85 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGGG
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhhhcc
Confidence 457777765 789999999999999999988776433 2233 3334455
Q ss_pred cCCCEEEECcccc
Q 005818 431 VKPTHVFNAAGVT 443 (676)
Q Consensus 431 ~~~d~Vih~a~~~ 443 (676)
+ |++|++||..
T Consensus 86 ~--D~~i~aAAvs 96 (223)
T d1u7za_ 86 Q--NIFIGCAAVA 96 (223)
T ss_dssp C--SEEEECCBCC
T ss_pred c--eeEeeeechh
Confidence 5 9999999965
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.14 E-value=0.023 Score=47.43 Aligned_cols=89 Identities=17% Similarity=0.059 Sum_probs=59.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH------HHH-----------------HHhhccCCCEEEECc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS------QLL-----------------ADIQNVKPTHVFNAA 440 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~------~~~-----------------~~~~~~~~d~Vih~a 440 (676)
..||.|+|+ |.+|+.++..|..+|.-=+++-.|..... ++. +.+.++ |+||.+|
T Consensus 19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~a--divvita 95 (159)
T d2ldxa1 19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANS--KLVIITA 95 (159)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTE--EEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccc--cEEEEec
Confidence 358999995 99999999999999863223333433111 011 123444 9999999
Q ss_pred cccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCCcE
Q 005818 441 GVTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGLLM 480 (676)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~ 480 (676)
|.... ..+...+.++.|+.-...+.....+.+-+-
T Consensus 96 g~~~~-----~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ 130 (159)
T d2ldxa1 96 GARMV-----SGQTRLDLLQRNVAIMKAIVPGVIQNSPDC 130 (159)
T ss_dssp SCCCC-----TTTCSSCTTHHHHHHHHHHTTTHHHHSTTC
T ss_pred ccccC-----CCCCHHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 85421 123444667889999999999988887543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.03 E-value=0.01 Score=49.74 Aligned_cols=24 Identities=25% Similarity=0.458 Sum_probs=22.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGI 409 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~ 409 (676)
||.|.|||||+|..|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988864
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.01 E-value=0.023 Score=47.43 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=25.4
Q ss_pred eEEEEcCCchhHHHHHHHHHHcC-CCcEEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNY-PEYKIVVLD 40 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~ 40 (676)
||.|.|||||+|+.|++.|.++. +..++..+.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 79999999999999999887774 345555554
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.99 E-value=0.013 Score=49.92 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=28.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK 41 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r 41 (676)
|+||.|.||||+.|+.|++.|.++ +.+++..+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~H-P~~ei~~l~s 34 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSS 34 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEEC
T ss_pred CeEEEEECCCcHHHHHHHHHHHhC-CCceEEEeec
Confidence 568999999999999999988875 4777776643
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.83 E-value=0.14 Score=41.07 Aligned_cols=73 Identities=11% Similarity=0.136 Sum_probs=49.2
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEEc
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMHF 88 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih~ 88 (676)
||.|.|++|-+|+.+++.+.+.. ++++...-..+ +. +. .+...++|+||.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~~~d~~-------------------------~~--~~-~~~~~~~DvvIDF 51 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDAG-------------------------DP--LS-LLTDGNTEVVIDF 51 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHST-TSEEEEEECTT-------------------------CC--TH-HHHTTTCSEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecC-------------------------Cc--hh-hhccccCCEEEEc
Confidence 69999999999999999887764 67765432211 10 01 1223689999998
Q ss_pred cccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEE
Q 005818 89 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIH 130 (676)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~ 130 (676)
..+.. +...++.|.+.+ ..+|.
T Consensus 52 S~p~~------------------~~~~~~~~~~~~--~~~Vi 73 (135)
T d1yl7a1 52 THPDV------------------VMGNLEFLIDNG--IHAVV 73 (135)
T ss_dssp CCTTT------------------HHHHHHHHHHTT--CEEEE
T ss_pred ccHHH------------------HHHHHHHHHhcC--CCEEE
Confidence 75422 566888888877 45553
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=94.81 E-value=0.066 Score=41.79 Aligned_cols=95 Identities=13% Similarity=0.067 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.++++|||+|| |-+|..-++.|++. +.+|++.+........ . .....++++......+.+ + .+++.
T Consensus 10 l~~k~vlVvG~-G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~-~---~~~~~~i~~~~~~~~~~d-----l--~~~~l 75 (113)
T d1pjqa1 10 LRDRDCLIVGG-GDVAERKARLLLEA--GARLTVNALTFIPQFT-V---WANEGMLTLVEGPFDETL-----L--DSCWL 75 (113)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHT--TBEEEEEESSCCHHHH-H---HHTTTSCEEEESSCCGGG-----G--TTCSE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeccCChHHH-H---HHhcCCceeeccCCCHHH-----h--CCCcE
Confidence 45789999995 99999999999999 6777777664422211 1 112346777776665432 2 56777
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
|+-+... . .-...+.+.|++.+ .+|++..
T Consensus 76 v~~at~d---------~--------~~n~~i~~~a~~~~---ilVNv~D 104 (113)
T d1pjqa1 76 AIAATDD---------D--------TVNQRVSDAAESRR---IFCNVVD 104 (113)
T ss_dssp EEECCSC---------H--------HHHHHHHHHHHHTT---CEEEETT
T ss_pred EeecCCC---------H--------HHHHHHHHHHHHcC---CEEEeCC
Confidence 7754321 1 01245778888865 5777654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=94.78 E-value=0.062 Score=44.06 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=55.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChH------HHH-----------------HHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRS------QLL-----------------ADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~------~~~-----------------~~~~~~~~d~Vih~a~ 441 (676)
+||.|+| +|.+|+.++..|+.+|.-=+++-.|+.... ++. +.++++ |+||-+||
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~a--diVVitaG 78 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADA--DVVISTLG 78 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTC--SEEEECCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccc--cEEEEecc
Confidence 4899999 599999999999998842122223332110 111 123444 99999998
Q ss_pred ccCCCCcchhccchhhHHhhhhhhHHHHHHHHHHcCC
Q 005818 442 VTGRPNVDWCETHKPETIRTNVVGTLTLADVCRENGL 478 (676)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~ 478 (676)
....+. .....+..+....|+.-...+.+..++++.
T Consensus 79 ~~~~~~-~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p 114 (146)
T d1hyha1 79 NIKLQQ-DNPTGDRFAELKFTSSMVQSVGTNLKESGF 114 (146)
T ss_dssp CGGGTC--------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccc-ccCCccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 541000 001112235578899999999999998875
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.72 E-value=0.015 Score=50.22 Aligned_cols=35 Identities=23% Similarity=0.509 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLD 40 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~ 40 (676)
+++.||.|.|||||.|+.|++.|.++ +.+++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhC-CCceEEEEe
Confidence 45679999999999999999999986 577876664
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=94.61 E-value=0.044 Score=45.91 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=56.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCCCCC-CCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSR-LSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
.+||.|.|++|-+|+.+++.+.+.. +.+++.. ++.............. ..+.-..+.-|+ ..++ ..+|+
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~------~~~~--~~~DV 74 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSL------DAVK--DDFDV 74 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCS------TTTT--TSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecccchhccchhhhhhccccCCceeeccH------HHHh--cccce
Confidence 4689999999999999999999875 6665443 3432211111111100 011111122232 2233 68899
Q ss_pred EEEccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Q 005818 85 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVST 133 (676)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS 133 (676)
||.+..+ .++...+++|.+++ ..+|.=+|
T Consensus 75 iIDFs~p------------------~~~~~~~~~a~~~~--~~~ViGTT 103 (162)
T d1diha1 75 FIDFTRP------------------EGTLNHLAFCRQHG--KGMVIGTT 103 (162)
T ss_dssp EEECSCH------------------HHHHHHHHHHHHTT--CEEEECCC
T ss_pred EEEeccH------------------HHHHHHHHHHHhcc--ceeEEecC
Confidence 9987532 24567888988877 45554333
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.60 E-value=0.014 Score=41.85 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+..+|||+||+|.+|...++.+... +.+|++..+++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~ 66 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE 66 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCH
Confidence 3578999999999999999988877 67888877754
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=94.58 E-value=0.012 Score=49.29 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+.+|+|+|. |-+|..+++.|.++ ++.+++++..+.... .........++.++.||.+|++.++++- -.+++.||
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~--~~~v~vId~d~~~~~--~~~~~~~~~~~~vi~Gd~~d~~~L~~a~-i~~a~~vi 76 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQR--GQNVTVISNLPEDDI--KQLEQRLGDNADVIPGDSNDSSVLKKAG-IDRCRAIL 76 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCCHHHH--HHHHHHHCTTCEEEESCTTSHHHHHHHT-TTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEeccchhHH--HHHHHhhcCCcEEEEccCcchHHHHHhc-cccCCEEE
Confidence 346899986 99999999999999 566777766432110 0001112357899999999999988764 25788888
Q ss_pred Ecc
Q 005818 87 HFA 89 (676)
Q Consensus 87 h~a 89 (676)
=+.
T Consensus 77 ~~~ 79 (153)
T d1id1a_ 77 ALS 79 (153)
T ss_dssp ECS
T ss_pred Ecc
Confidence 654
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.50 E-value=0.013 Score=50.26 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHH---HHHccCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVH---FILLTEK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~---~~~~~~~ 81 (676)
..+.+|||+||+|.+|...++.+... +.+|++.+++... .+..... +... ..|..+.+..+ +.....+
T Consensus 27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~--~~~~~~~----Ga~~-vi~~~~~~~~~~i~~~t~~~g 97 (174)
T d1yb5a2 27 KAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEG--QKIVLQN----GAHE-VFNHREVNYIDKIKKYVGEKG 97 (174)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHT----TCSE-EEETTSTTHHHHHHHHHCTTC
T ss_pred CCCCEEEEEecccccccccccccccc--Ccccccccccccc--ccccccc----Cccc-ccccccccHHHHhhhhhccCC
Confidence 34679999999999999999988888 6788888775421 1111111 2222 23666654433 3344567
Q ss_pred CCEEEEccc
Q 005818 82 IDTIMHFAA 90 (676)
Q Consensus 82 ~d~Vih~a~ 90 (676)
+|+||.+.+
T Consensus 98 ~d~v~d~~g 106 (174)
T d1yb5a2 98 IDIIIEMLA 106 (174)
T ss_dssp EEEEEESCH
T ss_pred ceEEeeccc
Confidence 999999876
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.49 E-value=0.022 Score=48.57 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=32.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|++|+|+| .|.+|..+++.|.+.|+.++|++.|++.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence 46899997 6999999999999998888999999864
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.41 E-value=0.011 Score=51.16 Aligned_cols=26 Identities=12% Similarity=0.392 Sum_probs=23.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
+++||.|.|||||+|+.|++.|.++.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP 29 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHP 29 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCS
T ss_pred CccEEEEECcccHHHHHHHHHHHhCC
Confidence 45799999999999999999999876
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=94.27 E-value=0.034 Score=47.91 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=29.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|+|.|+|| |.+|..++..|.++ |++|++.+|..
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~r~~ 34 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDA 34 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEECc-cHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 78999996 99999999999999 67899998864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.16 E-value=0.032 Score=47.50 Aligned_cols=75 Identities=8% Similarity=-0.018 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
....+|||+||+|-+|...++.+... +.+|++.+++.... +.+.. -+.+.+ .|..+. ..+.-...++|+
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~--~~~~~----lGa~~~-i~~~~~--~~~~~~~~g~D~ 94 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKL--ALPLA----LGAEEA-ATYAEV--PERAKAWGGLDL 94 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGS--HHHHH----TTCSEE-EEGGGH--HHHHHHTTSEEE
T ss_pred CCCCEEEEEeccccchhhhhhhhccc--cccccccccccccc--ccccc----ccccee-eehhhh--hhhhhccccccc
Confidence 34679999999999999999988888 67888887754211 11111 122222 244332 233334478999
Q ss_pred EEEccc
Q 005818 85 IMHFAA 90 (676)
Q Consensus 85 Vih~a~ 90 (676)
||.+.|
T Consensus 95 v~d~~G 100 (171)
T d1iz0a2 95 VLEVRG 100 (171)
T ss_dssp EEECSC
T ss_pred cccccc
Confidence 999876
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.11 E-value=0.12 Score=43.15 Aligned_cols=55 Identities=13% Similarity=0.083 Sum_probs=38.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCC-----------ChHHHHHHhhccCCCEEEECcc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE-----------NRSQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~-----------d~~~~~~~~~~~~~d~Vih~a~ 441 (676)
|+||.+.| .|.+|+.+++.|+++||+|..+..+-. ......+++..+ |+|+-+..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~--diii~~v~ 66 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGA--DVVISMLP 66 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSC--SEEEECCS
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhcccc--Ceeeeccc
Confidence 56899998 899999999999999998854432211 011233455555 88777665
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.95 E-value=0.024 Score=49.82 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=25.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
|||.|.| .||+|..++..|++.|++|..+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~ 29 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGV 29 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEE
Confidence 6899997 8999999999999999988444
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.95 E-value=0.051 Score=46.94 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=47.3
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccc--------cccCCCCCCCCCCeEEEEecCCCHHHHHH
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCS--------NLKNLNPSRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--------~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
+|.|+||.|.| +|..|.+++..|.++ +++|++.+|..... ....+......+++.. . .++++
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~-t------~~l~~ 73 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-T------SDVEK 73 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-E------SCHHH
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhccccccccccccccccccc-c------hhhhh
Confidence 56677899999 599999999999999 67888888753211 0111112222333332 1 23556
Q ss_pred HHccCCCCEEEEcc
Q 005818 76 ILLTEKIDTIMHFA 89 (676)
Q Consensus 76 ~~~~~~~d~Vih~a 89 (676)
++ .+.|+||-+.
T Consensus 74 a~--~~ad~iiiav 85 (189)
T d1n1ea2 74 AY--NGAEIILFVI 85 (189)
T ss_dssp HH--TTCSCEEECS
T ss_pred cc--CCCCEEEEcC
Confidence 66 7889988654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.92 E-value=0.039 Score=47.41 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=45.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCC--CeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSP--NFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~--~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
|+|.|.|+ |-.|.+++..|.++ +++|++..|.........+......+ .......++.-.+++.+++ .++|+|
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ad~I 75 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--ENAEVV 75 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--TTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH--hccchh
Confidence 68999995 99999999999999 57777776642211111110000000 1111112233345677777 789999
Q ss_pred EEcc
Q 005818 86 MHFA 89 (676)
Q Consensus 86 ih~a 89 (676)
|-+.
T Consensus 76 i~av 79 (180)
T d1txga2 76 LLGV 79 (180)
T ss_dssp EECS
T ss_pred hccc
Confidence 8754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.83 E-value=0.0069 Score=51.04 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
...++|||+|+ |-+|+.+++.|...|. -++++.+|...... .+... -+.+ ..+.+.+.+.+ ..+|+
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~-~~i~v~nRt~~ka~--~l~~~---~~~~-----~~~~~~~~~~l--~~~Di 87 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV-RAVLVANRTYERAV--ELARD---LGGE-----AVRFDELVDHL--ARSDV 87 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC-SEEEEECSSHHHHH--HHHHH---HTCE-----ECCGGGHHHHH--HTCSE
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCC-cEEEEEcCcHHHHH--HHHHh---hhcc-----cccchhHHHHh--ccCCE
Confidence 46789999997 9999999999999952 26777887632211 11000 0112 22345666677 78999
Q ss_pred EEEccccCC
Q 005818 85 IMHFAAQTH 93 (676)
Q Consensus 85 Vih~a~~~~ 93 (676)
||.+.+...
T Consensus 88 vi~atss~~ 96 (159)
T d1gpja2 88 VVSATAAPH 96 (159)
T ss_dssp EEECCSSSS
T ss_pred EEEecCCCC
Confidence 999987544
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=93.73 E-value=0.028 Score=47.83 Aligned_cols=77 Identities=12% Similarity=0.041 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecC--CCHHHHHHHHc---c
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDV--ASADLVHFILL---T 79 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl--~d~~~~~~~~~---~ 79 (676)
...+|+|+| +|.+|...++.+... +.+|+++++...... .+.+ ..... +..|- .+...+.+.+. .
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~~~-----ga~~~-~~~~~~~~~~~~~~~~~~~~~g 96 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNC-----GADVT-LVVDPAKEEESSIIERIRSAIG 96 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHT-----TCSEE-EECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEEc-ccccchhhHhhHhhh--cccccccchHHHHHHHHHHc-----CCcEE-Eeccccccccchhhhhhhcccc
Confidence 457899997 699999999888777 578999988643211 1111 11112 22222 23344433332 2
Q ss_pred CCCCEEEEcccc
Q 005818 80 EKIDTIMHFAAQ 91 (676)
Q Consensus 80 ~~~d~Vih~a~~ 91 (676)
.++|+||.+++.
T Consensus 97 ~g~D~vid~~g~ 108 (170)
T d1e3ja2 97 DLPNVTIDCSGN 108 (170)
T ss_dssp SCCSEEEECSCC
T ss_pred cCCceeeecCCC
Confidence 579999999874
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=93.66 E-value=0.034 Score=39.79 Aligned_cols=41 Identities=20% Similarity=0.234 Sum_probs=33.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHH
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLL 425 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~ 425 (676)
++|+|+||+|-+|...++.+...|.+|..+.+.-...+.++
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 57999999999999999999999999877666544444333
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.52 E-value=0.063 Score=44.02 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=42.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
++|+|.|.|+||-||....+-+.+....++|++++-. .+.+.+.+...+.+|..|
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-------------------------~N~~~L~~q~~ef~Pk~v 55 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-------------------------RNVKDLADAAKRTNAKRA 55 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-------------------------SCHHHHHHHHHHTTCSEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-------------------------CCHHHHHHHHHhhccccc
Confidence 4689999999999999999999886556888777543 244556666666777777
Q ss_pred E
Q 005818 86 M 86 (676)
Q Consensus 86 i 86 (676)
+
T Consensus 56 ~ 56 (150)
T d1r0ka2 56 V 56 (150)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=93.43 E-value=0.025 Score=47.87 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=26.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
|||+|.|+ |.+|+.++..|.+.|++|.++.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~ 30 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWL 30 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEE
Confidence 79999996 9999999999999999885543
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.03 E-value=0.21 Score=41.64 Aligned_cols=52 Identities=19% Similarity=0.153 Sum_probs=37.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCCh-------------HHHHHHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENR-------------SQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~-------------~~~~~~~~~~~~d~Vih~a~ 441 (676)
|||-|.| .|.+|+.+++.|++.||+|..+ |.... ....++++++ |+||-|-.
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~--d~~~~~~~~~~~~~~~~~~~~~e~~~~~--d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVS--DRNPEAIADVIAAGAETASTAKAIAEQC--DVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEE--CSCHHHHHHHHHTTCEECSSHHHHHHHC--SEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEE--eCCcchhHHHHHhhhhhcccHHHHHhCC--CeEEEEcC
Confidence 6899998 7999999999999999987544 33211 1123455666 88888764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.00 E-value=0.089 Score=43.06 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=41.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
|++|.|.|+||-||....+-+.+....++|.+++-. .+.+.+.+...+.+|..|+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~-------------------------~N~~~L~~q~~~f~pk~v~ 55 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-------------------------KNVTRMVEQCLEFSPRYAV 55 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-------------------------SCHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec-------------------------CcHHHHHHHHHHHhhcccc
Confidence 578999999999999999999887657888877543 2445555555556777765
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=92.91 E-value=0.042 Score=47.31 Aligned_cols=77 Identities=12% Similarity=0.080 Sum_probs=46.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCC--HHH----HHHHH
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVAS--ADL----VHFIL 77 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d--~~~----~~~~~ 77 (676)
..+.+|||+|+ |-+|...++.+...|. .+|++.+++..... .+++ +... ..|..+ ... +.+..
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga-~~Vi~~~~~~~~~~~a~~l-------Ga~~-vi~~~~~~~~~~~~~i~~~~ 96 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEEI-------GADL-TLNRRETSVEERRKAIMDIT 96 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHHT-------TCSE-EEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECC-Cccchhheeccccccc-ccccccccccccccccccc-------cceE-EEeccccchHHHHHHHHHhh
Confidence 34689999986 9999999999988842 27888887643211 1111 1111 123433 222 23333
Q ss_pred ccCCCCEEEEcccc
Q 005818 78 LTEKIDTIMHFAAQ 91 (676)
Q Consensus 78 ~~~~~d~Vih~a~~ 91 (676)
...++|+||.+++.
T Consensus 97 ~~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 97 HGRGADFILEATGD 110 (182)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCceEEeecCCc
Confidence 34579999999875
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=92.88 E-value=0.19 Score=42.37 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
|++.||.|.| +|++|+.+++.|.+. ++++++++...
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~ 36 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSR 36 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEES
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEec
Confidence 5667899998 699999999999875 47888766543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.82 E-value=0.069 Score=46.25 Aligned_cols=36 Identities=14% Similarity=0.373 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|+-++|.|.|| |.+|+.++..++.+ |++|++.|+..
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTE 37 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhC--CCcEEEEECCh
Confidence 66789999996 99999999999999 78999998865
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=92.70 E-value=0.06 Score=45.36 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=29.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||.|.| +|.+|+.+++.|.++ +++|++.||..
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~--g~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRR--GHYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCc
Confidence 6799997 599999999999999 78999999864
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.62 E-value=0.13 Score=43.74 Aligned_cols=62 Identities=10% Similarity=0.035 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
...++|.|.| .|-||+.+++.|..- +.+|+..++...... ..-.+++++++ ..+|+
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~--g~~v~~~d~~~~~~~-------------------~~~~~~l~ell--~~sDi 95 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAAL--GAQVRGFSRTPKEGP-------------------WRFTNSLEEAL--REARA 95 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHT--TCEEEEECSSCCCSS-------------------SCCBSCSHHHH--TTCSE
T ss_pred ccCceEEEec-cccccccceeeeecc--ccccccccccccccc-------------------eeeeechhhhh--hccch
Confidence 5678999998 699999999999988 789999988642111 00012356777 78898
Q ss_pred EEEccc
Q 005818 85 IMHFAA 90 (676)
Q Consensus 85 Vih~a~ 90 (676)
|+-+..
T Consensus 96 v~~~~p 101 (181)
T d1qp8a1 96 AVCALP 101 (181)
T ss_dssp EEECCC
T ss_pred hhcccc
Confidence 876543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=92.58 E-value=0.027 Score=48.37 Aligned_cols=78 Identities=14% Similarity=0.038 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHH---HHccCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHF---ILLTEK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~---~~~~~~ 81 (676)
..+.+|||+||+|.+|..+++..... +.+|++.+++....+ .+.. -+.+. ..|..+++..++ +....+
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~--~~~~----lGa~~-vi~~~~~d~~~~v~~~t~g~g 97 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQ--SALK----AGAWQ-VINYREEDLVERLKEITGGKK 97 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHH--HHHH----HTCSE-EEETTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHH--HHHh----cCCeE-EEECCCCCHHHHHHHHhCCCC
Confidence 34679999999999999999998888 688999888653211 1110 12222 246666544433 334457
Q ss_pred CCEEEEcccc
Q 005818 82 IDTIMHFAAQ 91 (676)
Q Consensus 82 ~d~Vih~a~~ 91 (676)
+|+|+.+.+.
T Consensus 98 ~d~v~d~~g~ 107 (179)
T d1qora2 98 VRVVYDSVGR 107 (179)
T ss_dssp EEEEEECSCG
T ss_pred eEEEEeCccH
Confidence 8999998863
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=92.44 E-value=0.08 Score=45.39 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCC-CCCCCCeEEEEecCCCHHHHHHHHccCCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNP-SRLSPNFKFIKGDVASADLVHFILLTEKID 83 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~-~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d 83 (676)
..++|||.|+ |..|++++..|.+.| .-.+++.+|...... ...+.. ....-.......++.+.+.+...+ ..+|
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g-~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d 92 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL--ASAD 92 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH--HTCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcC-CceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh--cccc
Confidence 4689999996 889999999999985 347777777642211 000000 001112345578899988888777 7899
Q ss_pred EEEEccccC
Q 005818 84 TIMHFAAQT 92 (676)
Q Consensus 84 ~Vih~a~~~ 92 (676)
+|||+....
T Consensus 93 iiIN~Tp~G 101 (182)
T d1vi2a1 93 ILTNGTKVG 101 (182)
T ss_dssp EEEECSSTT
T ss_pred eeccccCCc
Confidence 999997653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=92.44 E-value=0.075 Score=37.84 Aligned_cols=36 Identities=8% Similarity=-0.076 Sum_probs=30.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC 45 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~ 45 (676)
+|+|.|.| +|.+|+-++..-.+. |++++.++.....
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~L--G~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPL--GIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGG--TEEEEEECTTSCG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEcCCCCC
Confidence 47899999 599999999999999 7999999886543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=92.41 E-value=0.075 Score=45.30 Aligned_cols=36 Identities=8% Similarity=0.243 Sum_probs=32.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+|||+|+|| |++|-.++..|.+.++..+|+++++..
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999996 999999999999998889999998764
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=92.31 E-value=0.087 Score=44.41 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=39.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-ceeeccccCCChHHHHHHhhc--------cCCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI-PFEYGKGRLENRSQLLADIQN--------VKPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~-~v~~~~~Dl~d~~~~~~~~~~--------~~~d~Vih~a~~~ 443 (676)
++|+|.| +|..+++++..|.+.|. ++.++..+....+.+.+.+.. .++|+|||+....
T Consensus 18 ~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliINaTpiG 84 (167)
T d1npya1 18 AKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNVTSIG 84 (167)
T ss_dssp SCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTT
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhheeccccC
Confidence 4799999 59999999999999996 565554443323333332221 1569999987643
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.17 E-value=0.064 Score=46.28 Aligned_cols=76 Identities=12% Similarity=-0.038 Sum_probs=43.2
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH--HHHHHHHccCCCCEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA--DLVHFILLTEKIDTI 85 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~~~~~~~~~~~d~V 85 (676)
.+|||+||+|.+|+..++.....|. ..|+..+.+..... .+.. .-+.+ ...|..++ ....+.....++|+|
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga-~~vi~~~~~~e~~~--~l~~---~~gad-~vi~~~~~~~~~~~~~~~~~GvDvv 104 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC-SRVVGICGTQEKCL--FLTS---ELGFD-AAVNYKTGNVAEQLREACPGGVDVY 104 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC-SEEEEEESSHHHHH--HHHH---HSCCS-EEEETTSSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC-cceecccchHHHHh--hhhh---cccce-EEeeccchhHHHHHHHHhccCceEE
Confidence 6799999999999999999877752 24554444321110 0000 00111 22344443 332333344689999
Q ss_pred EEccc
Q 005818 86 MHFAA 90 (676)
Q Consensus 86 ih~a~ 90 (676)
|.+.+
T Consensus 105 ~D~vG 109 (187)
T d1vj1a2 105 FDNVG 109 (187)
T ss_dssp EESSC
T ss_pred EecCC
Confidence 99886
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=91.99 E-value=0.097 Score=43.62 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=41.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCc-eeecc--------------ccCCChHHHHHHhhccCCCEEEECccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIP-FEYGK--------------GRLENRSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~-v~~~~--------------~Dl~d~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
.++|+|.|+ |-+|..+++.|...|.+ +.+.. +...+-+++.+.+..+ |+||.+.+.
T Consensus 24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~--Divi~atss 94 (159)
T d1gpja2 24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS--DVVVSATAA 94 (159)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC--SEEEECCSS
T ss_pred cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccC--CEEEEecCC
Confidence 468999996 99999999999999974 42222 2233455667777776 999999873
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=91.93 E-value=0.037 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=28.6
Q ss_pred CCCccEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 381 QKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 381 ~~~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++.|+||.|.| +|-.|.+|+..|.+.|++|.+..
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~ 37 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWH 37 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEEC
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEE
Confidence 34567899999 78999999999999999886543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=91.81 E-value=0.16 Score=42.61 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=25.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
|||.|.| .|.+|+.+++.|.+.|++|..+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~ 29 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGV 29 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEE
Confidence 6899998 6999999999999999988544
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.65 E-value=0.13 Score=40.56 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=30.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~--g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTA--GVHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcc--cceEEEEeecc
Confidence 579999985 99999999999999 78898888864
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=91.57 E-value=0.13 Score=44.10 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
..+|+|+||+|-+|...++.....|.+|..+
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~ 60 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHccCCEEEEe
Confidence 3589999999999999999999999877433
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=91.48 E-value=0.19 Score=42.40 Aligned_cols=59 Identities=12% Similarity=0.027 Sum_probs=40.3
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhh--------------ccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQ--------------NVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~--------------~~~~d~Vih~a~~~ 443 (676)
.++|+|.| +|..+++++..|.+.|.++.++..+....+.+.+.+. ..++|+|||+....
T Consensus 18 ~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 18 GLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccC
Confidence 36899999 5788999999999999876555544333333333322 12579999997644
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.44 E-value=0.15 Score=43.17 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=26.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
..+|+|+||+|.+|...++.+...|.+|...
T Consensus 29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~ 59 (174)
T d1yb5a2 29 GESVLVHGASGGVGLAACQIARAYGLKILGT 59 (174)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEeccccccccccccccccCcccccc
Confidence 3489999999999999999999999876433
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=91.43 E-value=0.16 Score=42.84 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=33.2
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHh
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADI 428 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~ 428 (676)
|++|+|.| .|.+|..+++.|.+.|+.+.++-.|.. ++.++.+.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-~~~~~~a~ 43 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-PESISKAV 43 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-HHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-hHHHHHHH
Confidence 45799998 699999999999999987776666753 44444443
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.29 E-value=0.15 Score=39.92 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=29.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|-.++..|.+. +.+|+++.|..
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANF--GTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEECC-Cccceeeeeeeccc--ccEEEEEEecc
Confidence 579999995 99999999999999 78888888754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.18 E-value=0.078 Score=43.93 Aligned_cols=54 Identities=15% Similarity=0.133 Sum_probs=37.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCCh-----------HHHHHHhhccCCCEEEECcc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENR-----------SQLLADIQNVKPTHVFNAAG 441 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~-----------~~~~~~~~~~~~d~Vih~a~ 441 (676)
|||.|.| .|-+|+.+++.|+++|++|.....+-... +...++++.+ |+||-+..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSC--PVVISAVT 65 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTS--SEEEECSC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhc--CeEEEEec
Confidence 6899998 79999999999999999875443211111 1123455555 88887754
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.08 E-value=0.11 Score=43.41 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=30.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|++|.+.| .|.+|+.+++.|+++ +++|.+.+|..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~--g~~v~~~d~~~ 34 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQ 34 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHC--CCeEEEEECch
Confidence 46899997 799999999999999 68888888864
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=91.07 E-value=0.21 Score=41.20 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=42.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCce----------------------eeccccCCChHHHHHH-hhccCCCEEEECcc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPF----------------------EYGKGRLENRSQLLAD-IQNVKPTHVFNAAG 441 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v----------------------~~~~~Dl~d~~~~~~~-~~~~~~d~Vih~a~ 441 (676)
+|+|+|. |-+|..+++.|.++|++| .++.||.+|++.++++ ++.+ +.||-+..
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a--~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRC--RAILALSD 80 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTC--SEEEECSS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccC--CEEEEccc
Confidence 5999995 899999999999999754 5677888888888776 4444 88887654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=91.02 E-value=0.15 Score=39.94 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|-.++..|.+. +.+|+++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRL--GIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTT--TCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhc--cccceeeehhc
Confidence 579999996 99999999999998 78999988854
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=91.02 E-value=0.05 Score=46.39 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCCC---HHHHHHHHccC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVAS---ADLVHFILLTE 80 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~d---~~~~~~~~~~~ 80 (676)
....+|+|.|+ |.+|...++.+...|. .+|++.+++..... .+.+ +... ..|..+ .+.+.+.....
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga-~~Vi~~d~~~~r~~~a~~l-------Ga~~-~i~~~~~~~~~~v~~~t~g~ 95 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA-GRIIGVGSRPICVEAAKFY-------GATD-ILNYKNGHIEDQVMKLTNGK 95 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC-SCEEEECCCHHHHHHHHHH-------TCSE-EECGGGSCHHHHHHHHTTTS
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc-cccccccchhhhHHHHHhh-------Cccc-cccccchhHHHHHHHHhhcc
Confidence 34678999985 9999999998888742 36888887542111 1111 1111 123333 23344444445
Q ss_pred CCCEEEEccccC
Q 005818 81 KIDTIMHFAAQT 92 (676)
Q Consensus 81 ~~d~Vih~a~~~ 92 (676)
++|+||.+++..
T Consensus 96 G~D~vid~~g~~ 107 (174)
T d1jqba2 96 GVDRVIMAGGGS 107 (174)
T ss_dssp CEEEEEECSSCT
T ss_pred CcceEEEccCCH
Confidence 799999999853
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.93 E-value=0.2 Score=40.89 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=42.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCce--eeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPF--EYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v--~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
|++|.|.|+||-||...++-+.+...++ ..+.+ -.+.+.+.+....++|..|+-.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa-~~N~~~L~~q~~~f~pk~v~i~ 57 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEFSPRYAVMD 57 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHHCCSEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe-cCcHHHHHHHHHHHhhcccccc
Confidence 5689999999999999999998876444 33333 2356777777788888888765
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=90.88 E-value=0.26 Score=41.99 Aligned_cols=56 Identities=11% Similarity=0.157 Sum_probs=39.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-eeec--------------------------cccCCChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-FEYG--------------------------KGRLENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-v~~~--------------------------~~Dl~d~~~~~~~~~~~~~d~Vi 437 (676)
++|+|.|+ |..|++++..|.+.|.+ +.++ ..++.+.+.+...+... |+||
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--diiI 95 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASA--DILT 95 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTC--SEEE
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccc--ceec
Confidence 58999995 88899999999999863 2222 23344455555555555 9999
Q ss_pred ECcccc
Q 005818 438 NAAGVT 443 (676)
Q Consensus 438 h~a~~~ 443 (676)
|+....
T Consensus 96 N~Tp~G 101 (182)
T d1vi2a1 96 NGTKVG 101 (182)
T ss_dssp ECSSTT
T ss_pred cccCCc
Confidence 998654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.74 E-value=0.12 Score=44.18 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=26.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
|||.|.| +|-.|.+|+..|.+.|++|.+.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~ 29 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIW 29 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence 7899999 6999999999999999988654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.73 E-value=0.27 Score=41.37 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCe-EEEEecCCCHHHHHHHH---ccC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNF-KFIKGDVASADLVHFIL---LTE 80 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v-~~v~~Dl~d~~~~~~~~---~~~ 80 (676)
.+.+|+|+|+ |.+|...++.+...|. .+|++.++....-. .+++ +. ..+..+-.+.....+.+ ...
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~-~~Vi~~d~~~~rl~~a~~~-------Ga~~~~~~~~~~~~~~~~~~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKEI-------GADLVLQISKESPQEIARKVEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT-------TCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCC-ceEEeccCCHHHHHHHHHh-------CCcccccccccccccccccccccCCC
Confidence 4578999986 9999999999988852 37888887642111 1111 22 23333344555444443 224
Q ss_pred CCCEEEEcccc
Q 005818 81 KIDTIMHFAAQ 91 (676)
Q Consensus 81 ~~d~Vih~a~~ 91 (676)
++|+||.+.+.
T Consensus 97 g~Dvvid~~G~ 107 (171)
T d1pl8a2 97 KPEVTIECTGA 107 (171)
T ss_dssp CCSEEEECSCC
T ss_pred CceEEEeccCC
Confidence 79999999874
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=90.68 E-value=0.3 Score=39.80 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=42.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--ceeeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGI--PFEYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~--~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
++|.|.|+||-||....+-+.+... +|..+.+. .+-+.+.+....++|..|+-.-
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-~N~~~L~~q~~ef~Pk~v~i~d 59 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-RNVKDLADAAKRTNAKRAVIAD 59 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-SCHHHHHHHHHHTTCSEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-CCHHHHHHHHHhhccccceecc
Confidence 6899999999999999999988654 44444432 4667788888888999987653
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.59 E-value=0.19 Score=39.59 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++++|.|| |+||-.++..|.+. +.+|+++.+.+
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~l--G~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRL--GSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhh--CcceeEEEecc
Confidence 579999995 99999999999999 78888888754
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.54 E-value=0.12 Score=45.02 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=29.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||.|.| .||+|..++..|+++ +++|++.|...
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~--g~~V~g~D~n~ 33 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVSS 33 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhC--CCcEEEEeCCH
Confidence 6899996 799999999999999 78999998753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=90.53 E-value=0.99 Score=32.81 Aligned_cols=40 Identities=13% Similarity=-0.014 Sum_probs=28.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHH
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLA 426 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~ 426 (676)
|||.++|-.|-==+.|++.|.++|+.|.-. |+.+.+..++
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGS--D~~~~~~t~~ 41 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGS--NIEETERTAY 41 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE--CSSCCHHHHH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEE--eCCCChhHHH
Confidence 689999866544458999999999987433 5554444443
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=90.52 E-value=0.19 Score=39.64 Aligned_cols=34 Identities=26% Similarity=0.533 Sum_probs=29.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|..++..|.+. +.+|+++.+..
T Consensus 30 ~k~vvViGg-G~iG~E~A~~l~~~--g~~Vtlie~~~ 63 (123)
T d1nhpa2 30 VNNVVVIGS-GYIGIEAAEAFAKA--GKKVTVIDILD 63 (123)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHhhcc--ceEEEEEEecC
Confidence 579999985 99999999999999 78888887753
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=90.47 E-value=0.09 Score=43.67 Aligned_cols=75 Identities=12% Similarity=0.093 Sum_probs=40.5
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEE-cCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVL-DKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
+.||.|.| +|.+|+.+...+++..+..+++++ +|+.......... ..++... ..+.+.+.+..+..++|+|
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~----~~~i~~~---~~~~d~l~~~~~~~~iDiV 75 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ----RMGVTTT---YAGVEGLIKLPEFADIDFV 75 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH----HTTCCEE---SSHHHHHHHSGGGGGEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh----hcCCccc---ccceeeeeecccccccCEE
Confidence 46999999 899998755455565567777776 4433211100000 1122222 2233444444333578999
Q ss_pred EEcc
Q 005818 86 MHFA 89 (676)
Q Consensus 86 ih~a 89 (676)
|.+.
T Consensus 76 f~AT 79 (157)
T d1nvmb1 76 FDAT 79 (157)
T ss_dssp EECS
T ss_pred EEcC
Confidence 8753
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.47 E-value=0.28 Score=41.16 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
|++||.|-| .|-||+.+++.|.++. ..+++.+...
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~-dieiVaINd~ 35 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQD-DMELIGITKT 35 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEEES
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCC-CceEEEEecC
Confidence 457999998 7999999999998864 7888887653
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.40 E-value=0.084 Score=44.67 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHH---ccCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFIL---LTEKI 82 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~---~~~~~ 82 (676)
...+|+|+|++|-+|...++.+...| ..+|++.+++..... .+.. . +.+. ..|..+.+..++.. ...++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g-~~~V~~~~~~~~~~~--~~~~--~--Ga~~-~i~~~~~~~~~~~~~~~~~~~~ 98 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVE--AAKR--A--GADY-VINASMQDPLAEIRRITESKGV 98 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHH--HHHH--H--TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEeccccceeeeeecccccc-cccccccccchhhHH--HHHH--c--CCce-eeccCCcCHHHHHHHHhhcccc
Confidence 45789999999999999999998885 357888887542111 1100 0 1111 23344433333333 33468
Q ss_pred CEEEEcccc
Q 005818 83 DTIMHFAAQ 91 (676)
Q Consensus 83 d~Vih~a~~ 91 (676)
|+||.+++.
T Consensus 99 d~vid~~g~ 107 (170)
T d1jvba2 99 DAVIDLNNS 107 (170)
T ss_dssp EEEEESCCC
T ss_pred hhhhccccc
Confidence 999999874
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=90.35 E-value=0.2 Score=39.07 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=29.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGL--GAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhcc--ccEEEEEeecc
Confidence 478999985 99999999999999 67888888854
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.28 E-value=0.64 Score=38.66 Aligned_cols=82 Identities=10% Similarity=0.043 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecC--CCHHHHHHHHccCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDV--ASADLVHFILLTEKI 82 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl--~d~~~~~~~~~~~~~ 82 (676)
..+|+|+|.|-+.-+|+.|+..|+++ +.+|+..+................. ....|+ ...+.+.+.. ...
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~--gaTVt~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lk~~~--~~a 98 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGESLKLNK----HHVEDLGEYSEDLLKKCS--LDS 98 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCCSSCCC----CEEEEEEECCHHHHHHHH--HHC
T ss_pred CCCCEEEEECCccccHHHHHHHHHHC--CCEEEEeccccccccccccceeeee----eccccccccchhHHhhcc--ccC
Confidence 56799999999999999999999998 6777766553211110000000011 112222 3455666666 678
Q ss_pred CEEEEccccCCc
Q 005818 83 DTIMHFAAQTHV 94 (676)
Q Consensus 83 d~Vih~a~~~~~ 94 (676)
|+||..++..+.
T Consensus 99 DIvIsavG~p~~ 110 (171)
T d1edza1 99 DVVITGVPSENY 110 (171)
T ss_dssp SEEEECCCCTTC
T ss_pred CEEEEccCCCcc
Confidence 999998887653
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.20 E-value=0.26 Score=38.29 Aligned_cols=34 Identities=15% Similarity=0.375 Sum_probs=29.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+++++|.|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~--g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKL--GAQVSVVEARE 54 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhc--ccceEEEeeec
Confidence 579999985 99999999999999 68888888754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.19 E-value=0.53 Score=36.73 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=55.9
Q ss_pred CCCCCCCCeEEEEcC----------CchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCH
Q 005818 1 MATVYTPKNILITGA----------AGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASA 70 (676)
Q Consensus 1 ~~~~~~~~~vlVtGa----------tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~ 70 (676)
|+.-...++|||.|+ .-|-+.+.++.|.+. +++++.++.++..-..+.- -...+...=...
T Consensus 1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~d-------~aD~lYfePlt~ 71 (127)
T d1a9xa3 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPE-------MADATYIEPIHW 71 (127)
T ss_dssp CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGG-------GSSEEECSCCCH
T ss_pred CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcChh-------hcceeeeecCCH
Confidence 444445689999998 457899999999999 7999999887643211110 112233344567
Q ss_pred HHHHHHHccCCCCEEEEccc
Q 005818 71 DLVHFILLTEKIDTIMHFAA 90 (676)
Q Consensus 71 ~~~~~~~~~~~~d~Vih~a~ 90 (676)
+.+.++++..++|.|+-..|
T Consensus 72 e~v~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 72 EVVRKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHHHHCCSEEECSSS
T ss_pred HHHHHHHHHhCcCCeEEEee
Confidence 88888888889999985443
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.12 E-value=0.14 Score=43.79 Aligned_cols=29 Identities=24% Similarity=0.198 Sum_probs=25.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceee
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEY 413 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~ 413 (676)
.+|+|+||+|-+|...++.+...|.++..
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~ 55 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYT 55 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEECCCCCcccccchhhcccccccee
Confidence 47999999999999999999999987643
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=90.06 E-value=1.3 Score=32.80 Aligned_cols=44 Identities=9% Similarity=-0.031 Sum_probs=29.4
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHh
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADI 428 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~ 428 (676)
..++|.+.|-.|--=+.|++.|.++|++|.-. |.......+.+.
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGS--D~~~~~~~~~L~ 50 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGS--DIADGVVTQRLA 50 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEE--ESCCSHHHHHHH
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEE--eCCCChhhhHHH
Confidence 44689999854433388999999999988533 554444444433
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.70 E-value=0.8 Score=35.21 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=50.9
Q ss_pred CCCeEEEEcC----------CchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHH
Q 005818 6 TPKNILITGA----------AGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHF 75 (676)
Q Consensus 6 ~~~~vlVtGa----------tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~ 75 (676)
..++|||.|+ .-|-+.+.++.|.+. +++++.++.++..-..+. . -...+...=-..+.+..
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVstd~----d---~aD~lYfeplt~e~v~~ 73 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVSTDY----D---TSDRLYFEPVTLEDVLE 73 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTTST----T---SSSEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhhcCh----h---hcCceEEccCCHHHHHH
Confidence 4689999997 348899999999999 799999988764322111 1 11222333345677888
Q ss_pred HHccCCCCEEEEc
Q 005818 76 ILLTEKIDTIMHF 88 (676)
Q Consensus 76 ~~~~~~~d~Vih~ 88 (676)
+++..++|.|+-.
T Consensus 74 Ii~~E~p~~ii~~ 86 (121)
T d1a9xa4 74 IVRIEKPKGVIVQ 86 (121)
T ss_dssp HHHHHCCSEEECS
T ss_pred HHHHhCCCEEEee
Confidence 8877899988743
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=89.66 E-value=0.18 Score=43.66 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.1
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||+|.|| |++|-.++..|.+.+++.+|+++.|..
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999995 999999999999998889999988754
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.23 E-value=0.15 Score=42.83 Aligned_cols=75 Identities=15% Similarity=0.049 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCC-CHHHHHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVA-SADLVHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~~~~~~~~~~~d~ 84 (676)
...+|+|+|+ |.+|...++.+... +.+|++++++.... +.... . +...+. |.. +.+..+... ..+|+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~--G~~vi~~~~~~~k~--~~a~~--l--Ga~~~i-~~~~~~~~~~~~~--~~~d~ 94 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKR--EDAMK--M--GADHYI-ATLEEGDWGEKYF--DTFDL 94 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTH--HHHHH--H--TCSEEE-EGGGTSCHHHHSC--SCEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhc--cccccccccchhHH--HHhhc--c--CCcEEe-eccchHHHHHhhh--cccce
Confidence 4679999986 99999998888777 67899988864311 11110 0 222221 222 223333322 57899
Q ss_pred EEEccccC
Q 005818 85 IMHFAAQT 92 (676)
Q Consensus 85 Vih~a~~~ 92 (676)
|+.+.+..
T Consensus 95 vi~~~~~~ 102 (168)
T d1piwa2 95 IVVCASSL 102 (168)
T ss_dssp EEECCSCS
T ss_pred EEEEecCC
Confidence 99987654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.19 E-value=0.27 Score=38.87 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+++|+|.|| |+||-.++..|.+. +.+|+++.|..
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~--G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSAL--GSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcC--CcEEEEEeecc
Confidence 479999995 99999999999999 78899888854
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=89.17 E-value=0.27 Score=39.36 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
..++|+|.|| |++|-.++..|.+. +.+|+++.+..
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~--g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKA--NMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred cCCEEEEECC-chHHHHHHHHHHhh--Ccceeeeeecc
Confidence 3589999985 99999999999999 78898888854
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=88.98 E-value=0.28 Score=38.32 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=29.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+++++|.|| |+||-.++..|.+. |.+|+++.+..
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~--G~~Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARL--GAEVTVLEAMD 55 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHc--CCceEEEEeec
Confidence 578999995 99999999999999 67888887754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.96 E-value=0.24 Score=38.97 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=28.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
++|+|.|| |++|-.++..|.+. +.+|+++.+..
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEA--GYHVKLIHRGA 65 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CcEEEECC-cHHHHHHHHHhhcc--cceEEEEeccc
Confidence 68999985 99999999999999 78888888753
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=88.68 E-value=0.39 Score=39.61 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=44.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
..+|+|+|.|-+..+|+.|+..|.++ +.+|+...... .| +.+.. .+.|+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t------------------------~~---l~~~~--~~ADi 83 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFT------------------------KN---LRHHV--ENADL 83 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSC------------------------SC---HHHHH--HHCSE
T ss_pred cccceEEEEeccccccHHHHHHHHHh--hcccccccccc------------------------ch---hHHHH--hhhhH
Confidence 45799999999999999999999999 67777665432 01 22333 57799
Q ss_pred EEEccccCC
Q 005818 85 IMHFAAQTH 93 (676)
Q Consensus 85 Vih~a~~~~ 93 (676)
||.++|...
T Consensus 84 vI~a~G~p~ 92 (166)
T d1b0aa1 84 LIVAVGKPG 92 (166)
T ss_dssp EEECSCCTT
T ss_pred hhhhccCcc
Confidence 999998765
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.54 E-value=0.054 Score=46.05 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=29.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
|-||.|-| .|.||+.++|.|.++. +++++.+...
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~-dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP-DMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC-CCEEEEEECC
Confidence 35899998 8999999999999875 7899888654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=88.46 E-value=0.35 Score=40.51 Aligned_cols=75 Identities=13% Similarity=0.053 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
.+.+|+|.|+ |.||...++.+... +.++++.++..... +.... -+... ..|..+.+...... .++|+|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~~~~--~~a~~----lGad~-~i~~~~~~~~~~~~--~~~D~v 97 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAKR--EAAKA----LGADE-VVNSRNADEMAAHL--KSFDFI 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGGH--HHHHH----HTCSE-EEETTCHHHHHTTT--TCEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcc--cccchhhccchhHH--HHHhc----cCCcE-EEECchhhHHHHhc--CCCcee
Confidence 4679999986 88999999888877 67777777754321 11110 12222 24666666554433 689999
Q ss_pred EEccccC
Q 005818 86 MHFAAQT 92 (676)
Q Consensus 86 ih~a~~~ 92 (676)
|.+.+..
T Consensus 98 id~~g~~ 104 (168)
T d1uufa2 98 LNTVAAP 104 (168)
T ss_dssp EECCSSC
T ss_pred eeeeecc
Confidence 9998753
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=88.35 E-value=0.24 Score=41.21 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=29.4
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||-|.| .|.+|+.+++.|+++ +++|++.+|..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~--G~~V~~~d~~~ 33 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNP 33 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHC--CCeEEEEeCCc
Confidence 5799997 799999999999999 78899998865
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=88.26 E-value=0.19 Score=42.15 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=29.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
..+|||+||+|.+|...++..... +.+|+...++.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~ 58 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNR 58 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSS
T ss_pred CCEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCH
Confidence 347999999999999999988888 67888887764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.23 E-value=0.21 Score=41.03 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK 41 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r 41 (676)
++.++|||+|| |.+|..-++.|++. |.+|++++.
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~--GA~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPT--GCKLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGG--TCEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeC
Confidence 56799999997 99999999999999 566666643
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.06 E-value=0.65 Score=35.75 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=43.7
Q ss_pred cEEEEEcCCc----------chhHHHHHHHHHcCCceeecccc---------CC--------ChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTG----------WIGGLLSKICEKKGIPFEYGKGR---------LE--------NRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G----------~iG~~l~~~L~~~g~~v~~~~~D---------l~--------d~~~~~~~~~~~~~d~Vi 437 (676)
+||+|.|+.. |.+.+.++.|.+.|+++..+..+ +. ..+.+.+.++..+||.|+
T Consensus 5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~E~p~~ii 84 (121)
T d1a9xa4 5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVI 84 (121)
T ss_dssp CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHHhCCCEEE
Confidence 5899999643 78899999999999987444332 22 467788888888999988
Q ss_pred ECcc
Q 005818 438 NAAG 441 (676)
Q Consensus 438 h~a~ 441 (676)
-..|
T Consensus 85 ~~~G 88 (121)
T d1a9xa4 85 VQYG 88 (121)
T ss_dssp CSSS
T ss_pred eehh
Confidence 7655
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.04 E-value=0.37 Score=40.41 Aligned_cols=25 Identities=24% Similarity=0.222 Sum_probs=21.8
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcC
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
|++||.|-| .|-||+.+++.|.++.
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~ 25 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQD 25 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCC
Confidence 357999999 7999999999998765
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=88.04 E-value=0.22 Score=42.01 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=26.7
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
..+|+|+||+|-+|...++.+...|.+|..+
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~ 58 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAA 58 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEeccccchhhhhhhhcccccccccc
Confidence 3589999999999999999999999876443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=87.98 E-value=0.51 Score=38.92 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=43.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
.++|+|.|.+..+|+-|+..|.++|..|......-.+ +.+..... |+||.++|..
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~---l~~~~~~A--DivI~a~G~p 91 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN---LRHHVENA--DLLIVAVGKP 91 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC---HHHHHHHC--SEEEECSCCT
T ss_pred cceEEEEeccccccHHHHHHHHHhhccccccccccch---hHHHHhhh--hHhhhhccCc
Confidence 3689999999999999999999999988665543333 34556666 9999999954
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=87.96 E-value=0.52 Score=34.76 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=25.5
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
.+||+|.|. |-.|..+++.|.++|++|...
T Consensus 5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~ 34 (93)
T d2jfga1 5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVM 34 (93)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEe
Confidence 358999996 778999999999999988544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.88 E-value=0.68 Score=39.44 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
..++|.|.| .|.||+.+++.|..- +.+|+..++..
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 77 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESL--GMYVYFYDIEN 77 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred cceEEEEee-cccchhhhhhhcccc--cceEeeccccc
Confidence 467999997 899999999998776 89999998753
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=87.87 E-value=0.28 Score=38.62 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=30.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+++++|.|| |+||-.++..|.+. |.+|+++.|.+
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~--G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRI--GSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhc--CCeEEEEEEcc
Confidence 579999985 99999999999999 68898888864
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.86 E-value=0.99 Score=35.13 Aligned_cols=57 Identities=18% Similarity=0.199 Sum_probs=44.5
Q ss_pred cEEEEEcCCc----------chhHHHHHHHHHcCCceeecccc-----------------CCChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTG----------WIGGLLSKICEKKGIPFEYGKGR-----------------LENRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G----------~iG~~l~~~L~~~g~~v~~~~~D-----------------l~d~~~~~~~~~~~~~d~Vi 437 (676)
+||+|.|+.. |.+.+.++.|.+.|+++..+..+ -...+.+.+.++..+||.|+
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~pd~il 87 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVL 87 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhCcCCeE
Confidence 5899999743 78899999999999987444332 22578888999988999998
Q ss_pred ECcc
Q 005818 438 NAAG 441 (676)
Q Consensus 438 h~a~ 441 (676)
-..|
T Consensus 88 ~~~G 91 (127)
T d1a9xa3 88 PTMG 91 (127)
T ss_dssp CSSS
T ss_pred EEee
Confidence 6655
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=87.72 E-value=0.36 Score=38.05 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=29.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++++|.|| |+||-.++..|.+. +.+|+++.+..
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~--G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTL--GSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcC--CCEEEEEEeec
Confidence 579999995 99999999999999 78888887753
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.70 E-value=0.86 Score=37.76 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCE
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDT 84 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~ 84 (676)
..+++|+|.|-+..+|+.|+..|.++ +.+|+...... . .+.+.. .+.|+
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t--------------------------~-~l~~~~--~~aDi 85 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKT--------------------------A-HLDEEV--NKGDI 85 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTC--------------------------S-SHHHHH--TTCSE
T ss_pred cccceEEEEecCCccchHHHHHHHhc--cCceEEEeccc--------------------------c-cHHHHH--hhccc
Confidence 45799999999999999999999999 67777766532 1 122334 67899
Q ss_pred EEEccccCC
Q 005818 85 IMHFAAQTH 93 (676)
Q Consensus 85 Vih~a~~~~ 93 (676)
||.+++...
T Consensus 86 vi~a~G~~~ 94 (170)
T d1a4ia1 86 LVVATGQPE 94 (170)
T ss_dssp EEECCCCTT
T ss_pred hhhcccccc
Confidence 998888765
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=87.69 E-value=0.92 Score=34.76 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=29.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE 419 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~ 419 (676)
.++|+|.| +|-+|..-++.|++.|.+|.++..+..
T Consensus 12 ~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 12 DRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 35899999 789999999999999999877765554
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=87.58 E-value=0.1 Score=41.74 Aligned_cols=70 Identities=17% Similarity=0.216 Sum_probs=47.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
|.|+|.| -|-+|+.+++.|.+. + +++++...... +. ....++.++.||.++++.+.++- -.+++.||=
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~~--~--i~vi~~d~~~~--~~----~~~~~~~~i~Gd~~~~~~L~~a~-i~~A~~vi~ 68 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRGS--E--VFVLAEDENVR--KK----VLRSGANFVHGDPTRVSDLEKAN-VRGARAVIV 68 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCGG--G--EEEEESCTTHH--HH----HHHTTCEEEESCTTSHHHHHHTT-CTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHcCC--C--CEEEEcchHHH--HH----HHhcCccccccccCCHHHHHHhh-hhcCcEEEE
Confidence 4688988 589999999999544 4 44455433211 11 11347899999999999888763 357888885
Q ss_pred cc
Q 005818 88 FA 89 (676)
Q Consensus 88 ~a 89 (676)
+.
T Consensus 69 ~~ 70 (129)
T d2fy8a1 69 NL 70 (129)
T ss_dssp CC
T ss_pred ec
Confidence 43
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=87.41 E-value=0.59 Score=38.94 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=38.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.|||+||+|-+|.+.++.....|.+|.....+-...+.+.++ ..|.+++--
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l----Gad~vi~~~ 76 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVISRE 76 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEEEHH
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh----cccceEecc
Confidence 599999999999999999999999987666554444433332 347777743
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.24 E-value=0.3 Score=38.40 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=26.2
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDK 41 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r 41 (676)
+++++|+|| |+||-.++..|.+.| .+|+++.+
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~lG--~~Vtii~~ 51 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGIG--LDVTVMVR 51 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTT--CCEEEEES
T ss_pred CCeEEEECC-CccHHHHHHHHhhcC--CeEEEEEe
Confidence 578999995 999999999999995 55555555
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=87.22 E-value=0.21 Score=42.18 Aligned_cols=79 Identities=13% Similarity=0.058 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTI 85 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~V 85 (676)
...+|||.|+ |.+|...++.+...| ...|++.++..... +.... ....+++..+-.+.+.+.+.....++|+|
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g-~~~vv~~~~~~~k~--~~~~~---~ga~~~i~~~~~~~~~~~~~~~~~g~d~v 104 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMT-PATVIALDVKEEKL--KLAER---LGADHVVDARRDPVKQVMELTRGRGVNVA 104 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHC-CCEEEEEESSHHHH--HHHHH---TTCSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhc-CcccccccchhHHH--HHHhh---cccceeecCcccHHHHHHHhhCCCCceEE
Confidence 3578999885 999999999998886 34677777653211 11110 11123333222223334444444579999
Q ss_pred EEcccc
Q 005818 86 MHFAAQ 91 (676)
Q Consensus 86 ih~a~~ 91 (676)
|.+++.
T Consensus 105 id~~g~ 110 (172)
T d1h2ba2 105 MDFVGS 110 (172)
T ss_dssp EESSCC
T ss_pred EEecCc
Confidence 999874
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=87.15 E-value=0.31 Score=40.07 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=25.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeec
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYG 414 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~ 414 (676)
|||.+.| +|-+|+++++.|++.|+++...
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~ 29 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIIS 29 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEE
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEE
Confidence 6899998 8999999999999999987544
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=87.10 E-value=2 Score=38.10 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=27.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
..+|+|.| .|.+|++++..|+..| --+++++|..
T Consensus 30 ~~~VliiG-~GglGs~va~~La~~G-vg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLASAG-VGNLTLLDFD 63 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHT-CSEEEEECCC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcC-CCeEEEECCc
Confidence 46899999 6999999999999996 2366666653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=86.93 E-value=0.24 Score=42.08 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=26.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
|||.|.| +|-+|..++..|.++||+|..+.
T Consensus 2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~ 31 (184)
T d1bg6a2 2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWD 31 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEE
Confidence 5899999 59999999999999999886554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=86.91 E-value=0.34 Score=39.80 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=28.3
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||.|+| +|.+|+.+++.|+++ +++|+..++..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~--g~~v~~~~~~~ 33 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSR--GVEVVTSLEGR 33 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHT--TCEEEECCTTC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHC--CCeEEEEcCch
Confidence 5799997 799999999999999 67888877654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=86.59 E-value=0.52 Score=39.68 Aligned_cols=80 Identities=10% Similarity=-0.046 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCC-HHHHHHHHccCCCCE
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVAS-ADLVHFILLTEKIDT 84 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~~~~~~~~~~~d~ 84 (676)
...+|||.|+ |.+|...+..+...+ ..+|++.++........ .. ......+...+-.+ .....+.....++|+
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g-~~~Vi~~~~~~~k~~~a--~~--~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~ 101 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAG-AARIIGVDINKDKFAKA--KE--VGATECVNPQDYKKPIQEVLTEMSNGGVDF 101 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHH--HH--TTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcC-CceEEeecCcHHHHHHH--HH--hCCeeEEecCCchhHHHHHHHHHhcCCCCE
Confidence 3578999998 669999999999885 56888888865322110 00 01111111122222 233444444568999
Q ss_pred EEEcccc
Q 005818 85 IMHFAAQ 91 (676)
Q Consensus 85 Vih~a~~ 91 (676)
||.+.+.
T Consensus 102 vid~~G~ 108 (176)
T d2jhfa2 102 SFEVIGR 108 (176)
T ss_dssp EEECSCC
T ss_pred EEecCCc
Confidence 9999874
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.44 E-value=0.26 Score=42.41 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=28.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKG 416 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~ 416 (676)
+.+||.|.|+ |.+|+.++..++..|++|.++..
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~ 35 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ 35 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEEC
Confidence 3468999995 99999999999999999866543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=86.42 E-value=0.4 Score=39.34 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=29.6
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|+|.+.|+ |-+|+++++.|++.+ .++|++.+|+.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~-~~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQG-GYRIYIANRGA 34 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHC-SCEEEEECSSH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCC-CCcEEEEeCCh
Confidence 68999985 999999999999986 47999998865
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=86.41 E-value=0.36 Score=40.80 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=25.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCce
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPF 411 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v 411 (676)
.+|+|+||+|.+|..+++.....|.+|
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~V 56 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKL 56 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEE
T ss_pred CEEEEEccccccchHHHHHHHHhCCeE
Confidence 479999999999999999999999876
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=86.23 E-value=0.26 Score=42.12 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=29.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
-++|.|.|| |.+|+.++..++.+ |++|++.|+..
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASK--GTPILMKDINE 37 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 468999996 99999999999999 78888888864
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=86.03 E-value=0.29 Score=41.44 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=29.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.+|||+||+|.+|...++..... +.+|+.++++.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~ 66 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE 66 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecch
Confidence 48999999999999999998888 77888887754
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=85.98 E-value=0.51 Score=34.33 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=35.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCC--------ChHHHHHHhhccCCCEEE
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE--------NRSQLLADIQNVKPTHVF 437 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~--------d~~~~~~~~~~~~~d~Vi 437 (676)
|||||.| +|-=-.+|+..|.+..+++.+..++-. +.+....+....++|.||
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~G~~~~~~~~~~~~~~~~~~~~~idlvi 60 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNAGTKRDGTNHPYEGEKTLKAIPEEDIVI 60 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCTTGGGTSEECCCCTHHHHHTSCSSCEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCccccccceeccchhhHHHHHhccceeEE
Confidence 7999999 787889999999998888766554311 223344444445667654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.97 E-value=0.52 Score=39.66 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=27.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKG 416 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~ 416 (676)
.+|||+||+|-+|.+.++.....|.+|.....
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~ 64 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTG 64 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEEeccchHHHHHHHHHHHcCCceEEecC
Confidence 46999999999999999999999998855443
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=85.81 E-value=0.35 Score=34.22 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=31.0
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCCh
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENR 421 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~ 421 (676)
||+|.|.| +|.+|+.++..-.+.|+++.++.-|-.++
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence 46899999 89999999999999999987776655444
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=85.59 E-value=0.74 Score=38.68 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=21.6
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
|.||.|-| .|.||+.+++.|.+++
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~ 24 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP 24 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC
Confidence 46899999 8999999999999876
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=85.50 E-value=0.38 Score=40.82 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
|+.+|+|+| .|++|-.++..|.+.|..++++.+++.
T Consensus 2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~~~ 37 (183)
T d1d7ya1 2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVVGDE 37 (183)
T ss_dssp CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEESS
T ss_pred CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEecc
Confidence 355799999 599999999999999888888777654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=85.12 E-value=0.48 Score=42.60 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=29.1
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
.++|+|+|| |..|...+..|.++ +++|++++|.
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~--G~~V~vier~ 38 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARK--GYSVHILARD 38 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 468999995 99999999999999 6788888874
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=85.10 E-value=0.74 Score=35.79 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
..++|+|.|| |++|-.++..|.+. +.+|+++.+..
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~--g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNAT--GRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc--chhheEeeccc
Confidence 3589999985 99999999999998 78888888753
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.06 E-value=0.93 Score=37.53 Aligned_cols=55 Identities=9% Similarity=0.089 Sum_probs=44.1
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
+++|+|.|.+.-+|+-|+..|+++|..|..+..+-.+. .+...+. |+||.++|..
T Consensus 39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l---~~~~~~a--Divi~a~G~~ 93 (170)
T d1a4ia1 39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL---DEEVNKG--DILVVATGQP 93 (170)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH---HHHHTTC--SEEEECCCCT
T ss_pred cceEEEEecCCccchHHHHHHHhccCceEEEecccccH---HHHHhhc--cchhhccccc
Confidence 36899999999999999999999998887765544443 3455666 9999999854
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=84.82 E-value=0.36 Score=40.87 Aligned_cols=33 Identities=12% Similarity=0.390 Sum_probs=28.7
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|+|-|+| .|.+|..+++.|+++ +++|++.||..
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~--G~~V~~~dr~~ 34 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEK--GFKVAVFNRTY 34 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 5799997 899999999999999 67788888854
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=84.81 E-value=0.46 Score=39.82 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.8
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcC
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKG 408 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g 408 (676)
++||.|.| +|++|+.+++.|.+..
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~ 26 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQP 26 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCS
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCC
Confidence 47899999 7999999999998753
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.17 E-value=1.3 Score=35.41 Aligned_cols=78 Identities=12% Similarity=0.003 Sum_probs=51.5
Q ss_pred cEEEEEcCC---cchhHHHHHHHHHcCCceeecccc---CCC---hHHHHHHhhccCCCEEEECccccCCCCcchhccch
Q 005818 385 LKFLIYGRT---GWIGGLLSKICEKKGIPFEYGKGR---LEN---RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHK 455 (676)
Q Consensus 385 ~~vlitG~~---G~iG~~l~~~L~~~g~~v~~~~~D---l~d---~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 455 (676)
++|.|.|+| +-.|..+++.|.+.||+|..+.-. +.. ...+.++-+ .+|.|+-+..
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~--~iD~v~i~vp-------------- 83 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPD--KIEVVDLFVK-------------- 83 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSS--CCSEEEECSC--------------
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCc--cceEEEEEeC--------------
Confidence 479999998 789999999999999987443321 111 111222211 3577776644
Q ss_pred hhHHhhhhhhHHHHHHHHHHcCCcEEEeec
Q 005818 456 PETIRTNVVGTLTLADVCRENGLLMMNYAT 485 (676)
Q Consensus 456 ~~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS 485 (676)
...+..+++.|.+.|++.+.+.+
T Consensus 84 -------~~~~~~~~~e~~~~g~k~v~~~~ 106 (139)
T d2d59a1 84 -------PKLTMEYVEQAIKKGAKVVWFQY 106 (139)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred -------HHHHHHHHHHHHHhCCCEEEEec
Confidence 22356678888889999887744
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=84.05 E-value=0.53 Score=44.03 Aligned_cols=35 Identities=31% Similarity=0.545 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
++|+|+|+|| |.-|...|..|.++ +++|+++.+..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~--G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEK--GHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 3589999984 99999999999998 78999988754
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=83.95 E-value=0.43 Score=37.35 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++|+|.| +||+|-.++..|.++|.+|.++.
T Consensus 31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~ 60 (121)
T d1d7ya2 31 SRLLIVG-GGVIGLELAATARTAGVHVSLVE 60 (121)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-cchhHHHHHHHhhcccceEEEEe
Confidence 5799999 79999999999999999887654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=83.93 E-value=2.1 Score=37.92 Aligned_cols=102 Identities=13% Similarity=0.093 Sum_probs=54.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-eeecc-----------------ccCCCh--HHHHHHhhccCCCEEEECccccC
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP-FEYGK-----------------GRLENR--SQLLADIQNVKPTHVFNAAGVTG 444 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~-v~~~~-----------------~Dl~d~--~~~~~~~~~~~~d~Vih~a~~~~ 444 (676)
.+|+|.| .|.+|++++..|.+.|.. +.++- .|+..+ +.+.+.++...|++-|..-...-
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~ 109 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 109 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence 4899999 678999999999999952 22222 222211 22333344455665555433110
Q ss_pred CCCcchhcc---chh--hHHhhhhhhHHHHHHHHHHcCCcEEEeecCeee
Q 005818 445 RPNVDWCET---HKP--ETIRTNVVGTLTLADVCRENGLLMMNYATGCIF 489 (676)
Q Consensus 445 ~~~~~~~~~---~~~--~~~~~Nv~g~~~ll~a~~~~~~~~v~~sS~~v~ 489 (676)
....... ... ..-..|......+-++|.++++++++-+....+
T Consensus 110 --~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~i~g~~~~~~ 157 (247)
T d1jw9b_ 110 --DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRME 157 (247)
T ss_dssp --CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTE
T ss_pred --hhccccccccccceeeeccchhhhhhhHHHHHHHhCCCcccccccccc
Confidence 0000000 000 001223445556778899999988876554433
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.61 E-value=2 Score=38.85 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 3 TVYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
.....++|+|-| .|-+|+++++.|.+. |.+|+.++..
T Consensus 32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~--Gakvv~vsD~ 68 (293)
T d1hwxa1 32 PGFGDKTFAVQG-FGNVGLHSMRYLHRF--GAKCVAVGES 68 (293)
T ss_dssp SSSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEEET
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEcc
Confidence 345678999998 799999999999999 7888877653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=83.52 E-value=0.47 Score=37.20 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=26.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++|+|.| +||+|..++..|.+.|.+|+.+.
T Consensus 31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie 60 (123)
T d1nhpa2 31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVID 60 (123)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-ChHHHHHHHHHhhccceEEEEEE
Confidence 5799998 79999999999999999887764
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.45 E-value=1.3 Score=36.21 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=41.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhcc----------CCCEEEECccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNV----------KPTHVFNAAGV 442 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~----------~~d~Vih~a~~ 442 (676)
..++|+|.| .|+||+-+++.|...|.+|.....|. -..+++.++++ .-|+||-+.|.
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp--~~al~A~~dG~~v~~~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDP--INALQAAMEGYEVTTMDEACQEGNIFVTTTGC 89 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH--HHHHHHHHTTCEECCHHHHTTTCSEEEECSSC
T ss_pred cCCEEEEec-cccccHHHHHHHHhCCCeeEeeeccc--chhHHhhcCceEeeehhhhhhhccEEEecCCC
Confidence 346899998 99999999999999999887776653 23344444333 23888888773
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=83.40 E-value=0.6 Score=39.34 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=37.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEECc
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.|+|+||+|-+|...++.....|.+|..+...-...+.+. ....|.||+--
T Consensus 34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~----~lGad~vi~~~ 84 (177)
T d1o89a2 34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK----SLGASRVLPRD 84 (177)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH----HHTEEEEEEGG
T ss_pred cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH----hhccccccccc
Confidence 6999999999999999999999999876554333322222 22338888853
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=83.30 E-value=0.71 Score=38.98 Aligned_cols=57 Identities=18% Similarity=0.098 Sum_probs=43.4
Q ss_pred ccEEEEEcCCcchhHHHHHHHHHcCCceeecccc-----CCChHHHHHHhhccCCCEEEECcccc
Q 005818 384 FLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR-----LENRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 384 ~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~D-----l~d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
.++|.|.| .|-||+.+++.|..-|.+|..+.-+ ..-.+++++++..+ |+|+.+...+
T Consensus 42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~s--Div~~~~pl~ 103 (181)
T d1qp8a1 42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREA--RAAVCALPLN 103 (181)
T ss_dssp TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTC--SEEEECCCCS
T ss_pred CceEEEec-cccccccceeeeeccccccccccccccccceeeeechhhhhhcc--chhhcccccc
Confidence 36899999 7899999999999999887544322 22234678899988 9999876543
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=83.20 E-value=0.93 Score=37.95 Aligned_cols=77 Identities=13% Similarity=0.063 Sum_probs=45.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcc-ccccCCCCCCCCCCeEEEEecCCCHHHHHHH--HccCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYC-SNLKNLNPSRLSPNFKFIKGDVASADLVHFI--LLTEK 81 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~--~~~~~ 81 (676)
....+|+|.|+ |.+|...++.+...|. ..|++.+++... ...+.+ . -.++ .|..+.+..+++ +...+
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~-~~v~~~~~~~~k~~~a~~~-----G-a~~~--i~~~~~~~~~~i~~~t~gg 96 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQL-----G-ATHV--INSKTQDPVAAIKEITDGG 96 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHH-----T-CSEE--EETTTSCHHHHHHHHTTSC
T ss_pred CCCCEEEEeCC-CHHHhhhhhccccccc-ceeeeeccHHHHHHHHHHc-----C-CeEE--EeCCCcCHHHHHHHHcCCC
Confidence 34678999987 9999999998888863 356666654321 111111 1 1123 345554433332 22347
Q ss_pred CCEEEEcccc
Q 005818 82 IDTIMHFAAQ 91 (676)
Q Consensus 82 ~d~Vih~a~~ 91 (676)
+|+||.+.+.
T Consensus 97 ~D~vid~~G~ 106 (174)
T d1f8fa2 97 VNFALESTGS 106 (174)
T ss_dssp EEEEEECSCC
T ss_pred CcEEEEcCCc
Confidence 9999999874
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.11 E-value=0.57 Score=38.31 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=28.5
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
|||.+.| +|-+|+++++.|++. ++++++.+|..
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~--~~~i~v~~r~~ 33 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSL 33 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhC--CCeEEEEcChH
Confidence 5799997 799999999999998 67888888764
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.07 E-value=1.1 Score=37.09 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=44.5
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeecccc----------C------------CChHHHHHHhhccCCCEEEECc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR----------L------------ENRSQLLADIQNVKPTHVFNAA 440 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~D----------l------------~d~~~~~~~~~~~~~d~Vih~a 440 (676)
.+++|+|.|.|.-+|+-|+..|+++|..|.....+ + ..++.+.+..... |+||..+
T Consensus 28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~a--DIvIsav 105 (171)
T d1edza1 28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS--DVVITGV 105 (171)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC--SEEEECC
T ss_pred CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccC--CEEEEcc
Confidence 34689999999999999999999999876433211 1 1345677777777 9999998
Q ss_pred ccc
Q 005818 441 GVT 443 (676)
Q Consensus 441 ~~~ 443 (676)
|..
T Consensus 106 G~p 108 (171)
T d1edza1 106 PSE 108 (171)
T ss_dssp CCT
T ss_pred CCC
Confidence 843
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.85 E-value=0.73 Score=43.38 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=31.7
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+|+|+|+|| |.-|-..+..|++++.+++|+++.+..
T Consensus 4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 589999995 999999999999987678999998864
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=82.59 E-value=1.9 Score=33.05 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=49.2
Q ss_pred cEEEEEcCC---cchhHHHHHHHHHcCCceeecccc---CCC---hHHHHHHhhccCCCEEEECccccCCCCcchhccch
Q 005818 385 LKFLIYGRT---GWIGGLLSKICEKKGIPFEYGKGR---LEN---RSQLLADIQNVKPTHVFNAAGVTGRPNVDWCETHK 455 (676)
Q Consensus 385 ~~vlitG~~---G~iG~~l~~~L~~~g~~v~~~~~D---l~d---~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 455 (676)
++|.|.|+| +-.|..+.+.|++.||+|..+.-. +.. ..++.++-+ .+|+++-+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~--~~D~vvi~vp-------------- 65 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPK--DVDVIVFVVP-------------- 65 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCT--TCCEEEECSC--------------
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccc--cceEEEEEeC--------------
Confidence 369999988 678999999999999986443321 111 122222222 4587776543
Q ss_pred hhHHhhhhhhHHHHHHHHHHcCCcEEEe
Q 005818 456 PETIRTNVVGTLTLADVCRENGLLMMNY 483 (676)
Q Consensus 456 ~~~~~~Nv~g~~~ll~a~~~~~~~~v~~ 483 (676)
-..+..+++.|.+.|++.+++
T Consensus 66 -------~~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 66 -------PKVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp -------HHHHHHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHHHHhcCCceEEe
Confidence 122456778888889987765
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=82.53 E-value=1.3 Score=36.00 Aligned_cols=58 Identities=14% Similarity=0.047 Sum_probs=44.2
Q ss_pred CccEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhcc----------CCCEEEECcccc
Q 005818 383 PFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNV----------KPTHVFNAAGVT 443 (676)
Q Consensus 383 ~~~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~----------~~d~Vih~a~~~ 443 (676)
..++++|.| -|++|+-+++.|...|-+|.+...|. -..+++.++++ ..|++|-+.|..
T Consensus 22 aGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DP--i~alqA~mdGf~v~~~~~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 22 SGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDP--ICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNV 89 (163)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCH--HHHHHHHTTTCEECCHHHHTTTCSEEEECCSSS
T ss_pred cCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCc--hhhHHHHhcCCccCchhHccccCcEEEEcCCCC
Confidence 346899998 99999999999999999998888775 33444444443 249999888843
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=82.26 E-value=0.85 Score=38.30 Aligned_cols=77 Identities=9% Similarity=-0.030 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEE--ecCCC-HHHHHHHHccCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIK--GDVAS-ADLVHFILLTEK 81 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~--~Dl~d-~~~~~~~~~~~~ 81 (676)
...+|+|+|+ |.+|...++.+...| ..+|+++|+....-+ .+.+ +...+. -|-.+ .+.+.+.....+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G-~~~Vi~vd~~~~kl~~Ak~~-------GA~~~in~~~~~~~~~~~~~~~~g~G 99 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAG-ASRIIGIDLNKDKFEKAMAV-------GATECISPKDSTKPISEVLSEMTGNN 99 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHHH-------TCSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcC-CceEEEecCcHHHHHHHHhc-------CCcEEECccccchHHHHHHHHhcccc
Confidence 4578999985 999999999998884 368999998653211 0000 111111 12222 333445555578
Q ss_pred CCEEEEcccc
Q 005818 82 IDTIMHFAAQ 91 (676)
Q Consensus 82 ~d~Vih~a~~ 91 (676)
+|+||.+.+.
T Consensus 100 ~d~vi~~~g~ 109 (176)
T d1d1ta2 100 VGYTFEVIGH 109 (176)
T ss_dssp CCEEEECSCC
T ss_pred ceEEEEeCCc
Confidence 9999999874
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=82.24 E-value=0.52 Score=40.45 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
...++|.|.| .|.||+.+++.|..- +.+|+..++..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~f--g~~V~~~d~~~ 76 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGF--GAKVITYDIFR 76 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhh--cccccccCccc
Confidence 3468999998 799999999999876 78999988754
|
| >d1iu8a_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) family: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) domain: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.23 E-value=0.6 Score=40.37 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=41.9
Q ss_pred cEEEEEcCCcchh------HHHHHHHHHcCCceeeccccCC--C-hHHHHHHhhccCCCEEEECccc
Q 005818 385 LKFLIYGRTGWIG------GLLSKICEKKGIPFEYGKGRLE--N-RSQLLADIQNVKPTHVFNAAGV 442 (676)
Q Consensus 385 ~~vlitG~~G~iG------~~l~~~L~~~g~~v~~~~~Dl~--d-~~~~~~~~~~~~~d~Vih~a~~ 442 (676)
|||||||=.-|-| ..+++.|..++.++......+. + .+.+.++++..+||+|||++-.
T Consensus 1 mkILvTGF~pF~~~~~NpS~~i~~~L~~~~~~i~~~~LpV~~~~~~~~~~~~~~~~~pd~vih~G~~ 67 (206)
T d1iu8a_ 1 MKILLTGFEPFGGDDKNPTMDIVEALSERIPEVVGEILPVSFKRAREKLLKVLDDVRPDITINLGLA 67 (206)
T ss_dssp CCEEEEEECCCTTCSCCHHHHHHHHHHHHCTTEEEEEECSCHHHHHHHHHHHHHHHCCSEEEEEEEC
T ss_pred CEEEEEeeCCCCCCCCChHHHHHHHhhcccCeEEEEEeeccHHHHHHHHHHHHHhcCCcEEEEEEec
Confidence 6899999766655 4688888888877755444443 2 3456667777899999999753
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.88 E-value=0.55 Score=40.07 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=28.4
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
++||+|+|| |..|-..+..|.++|+. .|+++.+..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~-~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYS-DITIFEKQE 38 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCC-eEEEEEecC
Confidence 579999995 99999999999999532 477777753
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.59 E-value=0.53 Score=36.48 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=26.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++++|.| +|++|-.++..|.+.|.+|+++.
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve 52 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILE 52 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEE
Confidence 4799999 79999999999999999987664
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=81.48 E-value=0.98 Score=38.74 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 6 TPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
..++|.|.| .|-||+.+++.|..- +.+|++.++..
T Consensus 44 ~~ktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 78 (199)
T d1dxya1 44 GQQTVGVMG-TGHIGQVAIKLFKGF--GAKVIAYDPYP 78 (199)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred cceeeeeee-ccccccccccccccc--ceeeeccCCcc
Confidence 358999998 799999999999877 89999999854
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=81.47 E-value=2 Score=35.72 Aligned_cols=77 Identities=9% Similarity=-0.103 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCcccc-ccCCCCCCCCCCeEEEEecCC--C--HHHHHHHHcc
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSN-LKNLNPSRLSPNFKFIKGDVA--S--ADLVHFILLT 79 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~v~~v~~Dl~--d--~~~~~~~~~~ 79 (676)
....+|+|.|+ |.+|...++.+...| ..+|++.++....-+ .+.+ +.+.+ .|.. | .+........
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G-~~~Vi~~d~~~~kl~~a~~l-------Ga~~~-i~~~~~d~~~~~~~~~~~~ 95 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIEL-------GATEC-LNPKDYDKPIYEVICEKTN 95 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHHT-------TCSEE-ECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcC-CceeeccCChHHHHHHHHHc-------CCcEE-EcCCCchhHHHHHHHHhcC
Confidence 44678999985 999999999999885 357888887643211 1111 22221 2222 2 2333344444
Q ss_pred CCCCEEEEcccc
Q 005818 80 EKIDTIMHFAAQ 91 (676)
Q Consensus 80 ~~~d~Vih~a~~ 91 (676)
.+.|+||.+.+.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 589999998874
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.45 E-value=0.55 Score=36.74 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=27.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++++|.| +|+||-.++..|.+.|.+|.++.
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~ 53 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVE 53 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEEC-CCchHHHHHHHHHhhCcceeEEE
Confidence 4799999 79999999999999999997665
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=81.37 E-value=0.61 Score=42.40 Aligned_cols=31 Identities=16% Similarity=0.321 Sum_probs=27.6
Q ss_pred eEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 9 NILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
.|+|+|| |..|..++.+|.++ +.+|+++++.
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~--G~~V~vlE~~ 36 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKE--NKNTALFESG 36 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHC--CCcEEEEeCC
Confidence 4999985 99999999999999 6889999874
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.34 E-value=0.58 Score=39.85 Aligned_cols=52 Identities=17% Similarity=0.143 Sum_probs=35.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhhccCCCEEEEC
Q 005818 386 KFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQNVKPTHVFNA 439 (676)
Q Consensus 386 ~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 439 (676)
.|||+||+|-+|+..++.....|.++.....+ . .+....+......|.||+.
T Consensus 33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~-~-~e~~~~l~~~~gad~vi~~ 84 (187)
T d1vj1a2 33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICG-T-QEKCLFLTSELGFDAAVNY 84 (187)
T ss_dssp EEEESSTTSTTGGGHHHHHHHTTCSEEEEEES-S-HHHHHHHHHHSCCSEEEET
T ss_pred EEEEECCCchhhHHHHHHHHHcCCcceecccc-h-HHHHhhhhhcccceEEeec
Confidence 69999999999999999998899775333222 2 2223333333344777775
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=81.24 E-value=0.94 Score=38.09 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++++|+|+|| |..|-..+..|.++ +++|+++.+..
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~--G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAAR--GHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhh--ccceEEEeccC
Confidence 34689999995 99999999999999 68898888754
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=81.21 E-value=1.3 Score=34.64 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=56.8
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEEE
Q 005818 8 KNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIMH 87 (676)
Q Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vih 87 (676)
.+|+|.|| |.+|+.|++.|... .++++++.-....... -....++.... .+.+.+... ..++.++-
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~------G~~I~Gi~V~~-----~~~l~~~~~-~~i~iai~ 69 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGFG-ESFELRGFFDVDPEKV------GRPVRGGVIEH-----VDLLPQRVP-GRIEIALL 69 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCCC-SSEEEEEEEESCTTTT------TCEETTEEEEE-----GGGHHHHST-TTCCEEEE
T ss_pred ceEEEEcC-CHHHHHHHHhHhhc-CCcEEEEEEeCchHhc------CCEECCEEEec-----HHHHHHHHh-hcccEEEE
Confidence 48999995 99999999987554 3788877644321111 11122455542 344555553 45666554
Q ss_pred ccccCCcCCcCCChHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeccc
Q 005818 88 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKITGQIKRFIHVSTDE 135 (676)
Q Consensus 88 ~a~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~v~~SS~~ 135 (676)
+... ...+.+.+.|.+++ ++.+..++...
T Consensus 70 ~i~~------------------~~~~~I~d~l~~~g-Ik~I~~f~~~~ 98 (126)
T d2dt5a2 70 TVPR------------------EAAQKAADLLVAAG-IKGILNFAPVV 98 (126)
T ss_dssp CSCH------------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred eCCH------------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence 4321 12355777788878 88888776643
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=80.89 E-value=1.1 Score=38.26 Aligned_cols=56 Identities=16% Similarity=-0.009 Sum_probs=41.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCC--------ChHHHHHHhhccCCCEEEECcccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLE--------NRSQLLADIQNVKPTHVFNAAGVT 443 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~--------d~~~~~~~~~~~~~d~Vih~a~~~ 443 (676)
++|.|.| .|-||+.+++.|..-|.+|..+.-... ....+++++..+ |+|+.+...+
T Consensus 44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~s--Dii~~~~plt 107 (197)
T d1j4aa1 44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQA--DVISLHVPDV 107 (197)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHC--SEEEECSCCC
T ss_pred CeEEEec-ccccchhHHHhHhhhcccccccCcccccccccceeeecccccccccc--ccccccCCcc
Confidence 5899999 899999999999998988744321111 224577888888 9888776543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=80.89 E-value=0.89 Score=40.79 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=30.0
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.+||+|+|| |.-|..++..|.++ +++|+++.+..
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~--G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDA--GVDVDVYERSP 37 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 468999996 99999999999999 78999998753
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.61 E-value=0.57 Score=36.63 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=28.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecccc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGR 417 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~D 417 (676)
++++|.| +|+||-.++..|.+.|.+|.++..+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 3699999 7999999999999999999877544
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=80.57 E-value=0.69 Score=38.91 Aligned_cols=73 Identities=8% Similarity=0.091 Sum_probs=45.3
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCCccccccCCCCCCCCCCeEEEEecCCCHHHHHHHHccCCCCEEE
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLDYCSNLKNLNPSRLSPNFKFIKGDVASADLVHFILLTEKIDTIM 86 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~~d~Vi 86 (676)
+.+|-|+| .|.+|+.+++.|+++ +++|++.+|...... .+.......... ......+.+.+.+ ..+|.+|
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~--~l~~~~~~~~~~---~~a~~~~~~~~~~--~~~~~ii 71 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDH--GFVVCAFNRTVSKVD--DFLANEAKGTKV---LGAHSLEEMVSKL--KKPRRII 71 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSTHHHH--HHHHTTTTTSSC---EECSSHHHHHHHB--CSSCEEE
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHC--CCeEEEEcCCHHHHH--HHHHhccccccc---cchhhhhhhhhhh--cccceEE
Confidence 35799998 799999999999999 678888888653211 111010000000 1134555666666 6788888
Q ss_pred Ecc
Q 005818 87 HFA 89 (676)
Q Consensus 87 h~a 89 (676)
-+.
T Consensus 72 ~~~ 74 (176)
T d2pgda2 72 LLV 74 (176)
T ss_dssp ECS
T ss_pred Eec
Confidence 764
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=80.42 E-value=0.63 Score=35.97 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=26.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeecc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 415 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~ 415 (676)
++|+|.| +|++|-.++..|.+.|.+|..+.
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve 51 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFE 51 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEe
Confidence 4799999 79999999999999998886654
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=80.41 E-value=1.2 Score=37.37 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=30.6
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 7 PKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
.++|+|.|| |++|-.++..|.+.+...+|+.+.+..
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~~ 38 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDAT 38 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCcc
Confidence 478999985 999999999999998788888777643
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.40 E-value=3.6 Score=33.89 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=22.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIP 410 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~ 410 (676)
.+|+|.|+ |.+|...+..+...|.+
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~~ 52 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGAA 52 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCS
T ss_pred CEEEEECC-CccHHHHHHHHHHcCCc
Confidence 37999985 99999999999999974
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.32 E-value=1.1 Score=36.63 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCCC
Q 005818 5 YTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKLD 43 (676)
Q Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~~ 43 (676)
+.+|+|+|.| .|.||+.+++.|... +.+|++.+..+
T Consensus 22 l~Gk~v~V~G-yG~iG~g~A~~~rg~--G~~V~v~e~dp 57 (163)
T d1li4a1 22 IAGKVAVVAG-YGDVGKGCAQALRGF--GARVIITEIDP 57 (163)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ecCCEEEEec-cccccHHHHHHHHhC--CCeeEeeeccc
Confidence 4578999997 899999999999999 78888888754
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=80.23 E-value=3.4 Score=35.92 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCCcEEEEEcCC
Q 005818 4 VYTPKNILITGAAGFIASHVCNRLIGNYPEYKIVVLDKL 42 (676)
Q Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~r~ 42 (676)
....++|+|-| .|-+|+++++.|.+. +.+++..+..
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~--Gakvv~~d~~ 71 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTE--GAKLVVTDVN 71 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEeeccc
Confidence 46688999998 799999999999999 7888877654
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=80.06 E-value=1.3 Score=38.11 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=23.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcee
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFE 412 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~ 412 (676)
|||++.| ++..|..+++.|++.|+++.
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~ 27 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEIS 27 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEE
Confidence 6899997 56689999999999998773
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=80.04 E-value=0.5 Score=39.85 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=31.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCceeeccccCCChHHHHHHhh
Q 005818 385 LKFLIYGRTGWIGGLLSKICEKKGIPFEYGKGRLENRSQLLADIQ 429 (676)
Q Consensus 385 ~~vlitG~~G~iG~~l~~~L~~~g~~v~~~~~Dl~d~~~~~~~~~ 429 (676)
|||-|.| .|-+|..+++.|++.||+|... |. +++..+++.+
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~--dr-~~~~~~~l~~ 42 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVF--NR-TYSKSEEFMK 42 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEE--CS-SHHHHHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEE--EC-CHHHHHHHHH
Confidence 6899998 8999999999999999998654 43 4444444443
|