Citrus Sinensis ID: 005854

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670---
Protein Sequence
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccccccHHHHHHcccccccccccccccccHHHHHHHccccccccccccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHcccccEEEcccccccccccccccccEEEEEcccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEcccccccccEEEccccccccccccccccEEEccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHccccccccccEEEEEEEEEEccccHHHHHHHHHHHccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccccccccccccEEEEEEcccccccccccccccEEEEEcccccHHHHHHHHHHccccccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHcccHHHHHHccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHcccccccEccccccccccccEEccccEEEEcccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEcccccccEEEEEcccccccccccccccEEEccccEEEEEccccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccHccEEEEEEEEEEcccccccccccHHHHHHHHHHHcccccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEEccccccEHcccccEEEcccEEEEEEEcccccccEEEEcccEEEEccccHHHHHHHHHHHHHcccccccccccHHHccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHEEEHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MPWTTAISLFLLLLTttnsasvpgldtfltrqsqidphssndsfTSLQSSLKsslsaatpppipSLINSLlslslpisihirlvgptssfppstsssLLHSYLSAaqsssrfhvispsattsshslaishsphfdisvspslASHLSQTLDSLLastpsslrspllsipyssiDEIVKQDFEKEKHVNGIYIYLLNLGskaknyaysyspgesspgftkclgsiwtgkERYVWIdlgagpvdygpalsgdgvlpkgefhplaafhgrpksQKALLADLASLVWSAYQVLvvpslripvyfeNSLIVQFIHIYglegadssgldwKSIERTFMDeandngllvgdqslnfrtykvnfadcsvcSFAISKSInsytsrflfdnYTMIVSEYLDSKKLHQIMSELAEEFRRvagipeedsgrvlpvyvfdldsnslllLDRFHQSVAFRDMVIAVRtrnsqtvsdyscngrhvfthtrelerPLVGSILqsmwgvspthLLWSsmhnntlvdytwsigqtpfgpfseisslsfvQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASlvcfkdppvpwasiSMSAVVFLALSYVYTKRDQLFRNKRKQF
Flexible Loop (DISEMBL)
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYspgesspgftKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGipeedsgrvLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRtrnsqtvsdyscnGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHggerrllkqnRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF
Low Complexity Region (SEG)
MPWttaislflllltttNSASVPGLDTFLTRQSQIDPHSSNDsftslqsslksslsAATpppipslinsllslslpisihiRLVGptssfppstsssllhsylsaaqsssRFHVISPSATTSSHSLAISHSPHFDISVSPSLASHLSQTLDsllastpsslrspllsipyssIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFdldsnslllldRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF
Disordered region (IsUnstruct)
**WTTAISLFLLLLTTTNSASVPGLDTFL************************************LINSLLSLSLPISIHIRLVG********************************************************************************LSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQL********
Disordered Region (DISOPRED)
**WTTAISLFLLLLTTTNSASVPGLDTFLTRQSQ****S*NDSFTSL****************************PISIHIRLVGPTSSF*********HSYLSAAQSSSRFHVISP********LAISHSPHFDISVSPSL***********************LSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAY***********TKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEA***********LNFRTYKVNFADCSVCSFAIS*********FLFDNYTMIVSEYLDSKKLHQIMS*****************GRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRT****************FTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGG********RYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFR******
Disordered Region (DISEMBL)
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQI************************PPPIPSLINSLLSLSLPISIHIRLVGPT***********LHSYLSAAQSSSRFHVI***********AISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF
Disordered Region (DISPRO)
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPH*SN*S**SLQSSLKSSLS********SLINSLLSLSLPISIHIRLVGPTSSFPPSTS*SL*HSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKR***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	673
224141353	672	predicted protein [Populus trichocarpa]	0.968	0.970	0.744	0.0
225452708	673	PREDICTED: uncharacterized protein LOC10	0.962	0.962	0.727	0.0
449459516	672	PREDICTED: uncharacterized protein LOC10	0.973	0.974	0.685	0.0
15228470	687	uncharacterized protein [Arabidopsis tha	0.959	0.940	0.676	0.0
255552864	617	conserved hypothetical protein [Ricinus	0.711	0.776	0.814	0.0
356573460	686	PREDICTED: uncharacterized protein LOC10	0.977	0.959	0.630	0.0
147866284	615	hypothetical protein VITISV_042444 [Viti	0.876	0.959	0.652	0.0
223945159	671	unknown [Zea mays] gi|413954412|gb|AFW87	0.970	0.973	0.549	0.0
242093430	673	hypothetical protein SORBIDRAFT_10g02284	0.937	0.937	0.567	0.0
226507406	671	uncharacterized protein LOC100279525 pre	0.970	0.973	0.548	0.0

>gi|224141353|ref|XP_002324037.1| predicted protein [Populus trichocarpa] gi|222867039|gb|EEF04170.1| predicted protein [Populus trichocarpa]

 Score =  961 bits (2485), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/662 (74%), Positives = 578/662 (87%), Gaps = 10/662 (1%)

Query: 15  TTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPP-IPSLINSLLSL 73
           T T  + +PGLDTFL+ +S +DP S+NDSF SL SSLK SLS ++P P IPSLI+SLLSL
Sbjct: 18  TITTPSPIPGLDTFLSHRSTVDPSSTNDSFPSLPSSLKKSLSLSSPHPHIPSLISSLLSL 77

Query: 74  SLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPH 133
           +LP+S+HIRLVG +     S SSSLL ++LS A  S  FHVI    TT SH L+I HSPH
Sbjct: 78  TLPLSLHIRLVGSSFP---SDSSSLLQTFLSTAHISDHFHVI----TTDSHRLSIKHSPH 130

Query: 134 FDIS-VSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYI 192
            ++S    +L+S LS+ L S ++ + SSLRSPLLSIPY+++D I+KQDF++EK V G+Y+
Sbjct: 131 LEVSHAGSTLSSRLSEALKSSISESTSSLRSPLLSIPYNTVDRIIKQDFDREKPVQGVYV 190

Query: 193 YLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGV 252
           YL+NLGS++KNYAYSYS G+SSPGFTKCLG+IWTGKERY+WIDL AGPVDYGPA+SGDGV
Sbjct: 191 YLINLGSQSKNYAYSYSEGDSSPGFTKCLGTIWTGKERYLWIDLSAGPVDYGPAISGDGV 250

Query: 253 LPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIY 312
           LP+GEFHPL A HGRPKS KALLADLASL+W+AYQVL+VPSLRIPV+F+NSLIV+FIHIY
Sbjct: 251 LPRGEFHPLTAMHGRPKSHKALLADLASLIWNAYQVLLVPSLRIPVHFQNSLIVEFIHIY 310

Query: 313 GL-EGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSIN 371
           G   G D SGLDWK IE+TFMDEAN+ GLL+ +Q+L FR Y+VN+  CS+CSFAIS+SIN
Sbjct: 311 GSGSGKDLSGLDWKEIEKTFMDEANEGGLLLRNQNLAFRKYEVNYDQCSICSFAISRSIN 370

Query: 372 SYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSN 431
           SYTSRFLFDNYT+IVSEYLDSK+LHQI+S+ AEEFRR+AG PEED  RVLPVYVFDLD N
Sbjct: 371 SYTSRFLFDNYTLIVSEYLDSKRLHQILSDSAEEFRRMAGTPEEDFSRVLPVYVFDLDYN 430

Query: 432 SLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWG 491
           +LL+LDR+HQSVAFRDMVIAVRT+ +QTVSDYSCNGRH+FTHTR LERPLVGSILQSMWG
Sbjct: 431 TLLMLDRYHQSVAFRDMVIAVRTKTTQTVSDYSCNGRHMFTHTRVLERPLVGSILQSMWG 490

Query: 492 VSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISS 551
           VSPTHL WS  HNNTLVDYTWS+GQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISS
Sbjct: 491 VSPTHLSWSPRHNNTLVDYTWSVGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISS 550

Query: 552 AVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSD 611
            +DVLESI AHGG+R+LLKQN+++ F+QRWNLFKYKLDKA++A+SH DF+MALYYLRSSD
Sbjct: 551 VIDVLESIIAHGGDRKLLKQNQHVQFIQRWNLFKYKLDKAISAMSHKDFDMALYYLRSSD 610

Query: 612 HDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRK 671
           HD+Y +HSLV+HA+QELEASLVCFKDPP PW S+SMSAVVF AL YVY+KR+ LFRNKRK
Sbjct: 611 HDMYAIHSLVYHASQELEASLVCFKDPPFPWGSVSMSAVVFFALVYVYSKRESLFRNKRK 670

Query: 672 QF 673
           QF
Sbjct: 671 QF 672

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452708|ref|XP_002277137.1| PREDICTED: uncharacterized protein LOC100249048 [Vitis vinifera]

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/656 (72%), Positives = 559/656 (85%), Gaps = 8/656 (1%)

Query: 19  SASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPIS 78
           S+ + GLD+FL++QS++DP ++NDSF SL S L+ +L +AT       + S L LSL +S
Sbjct: 25  SSPILGLDSFLSQQSRLDPQATNDSFLSLPSHLRKTLFSATTHH--RHLISSLQLSLSVS 82

Query: 79  IHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISV 138
           +H+ LVGP  SFP S + SLL S+LSA  SS  FHVISP +T   H     HS H D+S+
Sbjct: 83  LHVILVGP--SFP-SDAPSLLSSFLSAVSSSDHFHVISPFSTDHRH--LTKHSLHLDVSL 137

Query: 139 SPSLAS-HLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNL 197
           SP   S  +S  L S +++TP+SLRS L+SIPY+++D I++Q FEKEK    +YIYLLNL
Sbjct: 138 SPPSLSSQVSDALRSQISNTPNSLRSSLISIPYAAVDNIIRQHFEKEKPHQEVYIYLLNL 197

Query: 198 GSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGE 257
           G ++K+YAY+Y  GESSP FTKC GS+WTGK+RY+W+DL AGPVDYGPALSGDGVLP+GE
Sbjct: 198 GPQSKSYAYNYGSGESSPAFTKCFGSLWTGKDRYLWVDLAAGPVDYGPALSGDGVLPRGE 257

Query: 258 FHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGA 317
           FHPLA+ HGRPKSQKALLAD ASLV+SAYQVLVVPSLRIPV FENSLIVQFIH++G    
Sbjct: 258 FHPLASLHGRPKSQKALLADFASLVYSAYQVLVVPSLRIPVPFENSLIVQFIHVHGDLNM 317

Query: 318 DSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRF 377
           DS+GLDW+SIERTFMDE ND GLL+GDQSL F+TY++ +ADC++CSFAIS+S NSYTSRF
Sbjct: 318 DSNGLDWQSIERTFMDEVNDGGLLLGDQSLRFKTYELRYADCAICSFAISRSTNSYTSRF 377

Query: 378 LFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLD 437
           LFDNYT+IVSEYLDSK+LHQI+S+ AEEFRR A IPEED GRVLPVYVFDLD N+LLLLD
Sbjct: 378 LFDNYTLIVSEYLDSKRLHQILSDSAEEFRRFANIPEEDFGRVLPVYVFDLDHNALLLLD 437

Query: 438 RFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHL 497
           R+HQSVAF+DMVIAVRTRN+QTVSDYSCNGRH+FT TRELERPLVGSILQSMWGVSPTHL
Sbjct: 438 RYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHMFTQTRELERPLVGSILQSMWGVSPTHL 497

Query: 498 LWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLE 557
            WS  HN+TLVDYTWS+GQTPFGPFSE  SLSFVQKDAARRN+LLTSLNYS++SA+DVLE
Sbjct: 498 SWSPRHNSTLVDYTWSVGQTPFGPFSETLSLSFVQKDAARRNILLTSLNYSLTSAIDVLE 557

Query: 558 SIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTM 617
           SIAAHGGER LLK NR+++FVQRWNLFKYKLDKAV++LSH DFEMALY+LRSSDHDLY +
Sbjct: 558 SIAAHGGERNLLKHNRHVEFVQRWNLFKYKLDKAVSSLSHFDFEMALYFLRSSDHDLYAI 617

Query: 618 HSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF 673
           HSLV+HA+QE+EASLVCFKDPP PWAS S S VV  AL YVYTKRD+LFRNKRKQF
Sbjct: 618 HSLVYHASQEMEASLVCFKDPPFPWASFSGSVVVVFALFYVYTKRDKLFRNKRKQF 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459516|ref|XP_004147492.1| PREDICTED: uncharacterized protein LOC101211026 [Cucumis sativus] gi|449518541|ref|XP_004166300.1| PREDICTED: uncharacterized protein LOC101228283 [Cucumis sativus]

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/668 (68%), Positives = 555/668 (83%), Gaps = 13/668 (1%)

Query: 9   LFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLIN 68
           LFL ++ T  SA + GLD+FL +QS+ DPH+SND+F SL SSLK SLS ++ PP      
Sbjct: 15  LFLFIIATATSAPILGLDSFLAQQSRFDPHASNDTFLSLSSSLKKSLSLSSSPPPLIPSF 74

Query: 69  SLLSLSLPISI--HIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSL 126
               LSL +S   H+RLVG      PS SS  L S+LSA+  S  FHVI+P   +  H L
Sbjct: 75  ISSLLSLSLSFSLHVRLVGDF----PSDSSIHLSSFLSASLPSDHFHVIAP-FDSYQHRL 129

Query: 127 AISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKH 186
           AI HS H D+S +PSLASHLS+ L S +++T SSLRS LL++PY S+D ++K+DFEKEK 
Sbjct: 130 AIKHSLHLDVSHAPSLASHLSEILKSEISNTASSLRSSLLAVPYESVDRVIKKDFEKEKS 189

Query: 187 VNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPA 246
             G+YIYLLNLG ++K YAY+Y  G+SSPGFTKCLGSIW+G ERY+W+DLGAGPVDYGP+
Sbjct: 190 GEGVYIYLLNLGPQSKPYAYTYGHGDSSPGFTKCLGSIWSGGERYLWVDLGAGPVDYGPS 249

Query: 247 LSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIV 306
           LSGDGVLP+GEFHPLA  HGRPKSQKALLADLASLVWSAYQV +VPS+RIPV FE+SL+V
Sbjct: 250 LSGDGVLPRGEFHPLATLHGRPKSQKALLADLASLVWSAYQVHLVPSMRIPVPFESSLVV 309

Query: 307 QFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAI 366
           QFIH+YG E +D   LDWKSIERT      D G+L+G+QSL+F+ Y V++A C +C+FAI
Sbjct: 310 QFIHVYGSESSDGGDLDWKSIERTL----RDGGMLLGEQSLSFKHYSVSYAKCPICAFAI 365

Query: 367 SKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDS-GRVLPVYV 425
           S+S NSYTSRFLFDNYT+IV+EYLDSK+LHQI+S+ AEEFRR AG PEE+   RV+PVYV
Sbjct: 366 SRSTNSYTSRFLFDNYTLIVNEYLDSKRLHQILSDSAEEFRR-AGFPEEEEMARVIPVYV 424

Query: 426 FDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSI 485
           FDL+ N++LLLDR+HQSVAF DMVIAVRT+N+QTVSDYSCNGRHVFTHTR+LERPLVGSI
Sbjct: 425 FDLNLNTILLLDRYHQSVAFTDMVIAVRTKNTQTVSDYSCNGRHVFTHTRDLERPLVGSI 484

Query: 486 LQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSL 545
           LQSMWGVSPTHL WSS HN+T+VDY+WSIGQTPFGPFSE+SSLSFVQKDAARRNV+LT+L
Sbjct: 485 LQSMWGVSPTHLAWSSRHNDTIVDYSWSIGQTPFGPFSEVSSLSFVQKDAARRNVILTAL 544

Query: 546 NYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALY 605
           N SI+SA+DVL S+AAHGG+R LLK  +  +F+QRWNLFKYKLDKA++ +SH DFEMALY
Sbjct: 545 NSSITSAIDVLNSVAAHGGDRSLLKPKQRTEFIQRWNLFKYKLDKAMSVMSHFDFEMALY 604

Query: 606 YLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQL 665
           Y+RSSDHDLYT+HS+V++A+QELE SLVCFKDPP PW S+S+S ++F A  YVYTKRD++
Sbjct: 605 YIRSSDHDLYTLHSIVYNASQELEGSLVCFKDPPFPWGSVSVSVLLFFAFLYVYTKRDRI 664

Query: 666 FRNKRKQF 673
           F+NKRKQF
Sbjct: 665 FKNKRKQF 672

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228470|ref|NP_189514.1| uncharacterized protein [Arabidopsis thaliana] gi|11994779|dbj|BAB03169.1| unnamed protein product [Arabidopsis thaliana] gi|332643962|gb|AEE77483.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/656 (67%), Positives = 548/656 (83%), Gaps = 10/656 (1%)

Query: 24  GLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPISIHIRL 83
           GLDTFLT Q ++DP SSNDSFTSL SSLK SLS+++        + L      I +++R 
Sbjct: 36  GLDTFLTNQYRLDPKSSNDSFTSLSSSLKRSLSSSSIHFSSLSKSLLSLSIS-IPLNVRF 94

Query: 84  VGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSS-HSLAISHSPHFDISVSP-S 141
           +G   SFP S+++S L  ++SAA ++  FHVISPS  +S+ H L ISHS H D S+SP S
Sbjct: 95  IG--DSFP-SSAASTLSEFISAAVTNDNFHVISPSPDSSTNHKLVISHSLHLDASLSPQS 151

Query: 142 LASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNG-IYIYLLNLGSK 200
           L++ L  TL +L++ST SSLRS LLSI Y+ IDEI+KQ++EKEKH +G +YIYL++LGS+
Sbjct: 152 LSTRLDSTLKTLISSTTSSLRSNLLSIQYNPIDEIIKQEYEKEKHGDGGVYIYLISLGSQ 211

Query: 201 AKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHP 260
           AK YAYSYS G+SS GFTKCLGSIWTGK+RY+WIDL AGPVDYGPALSGDGVLP+GEFHP
Sbjct: 212 AKPYAYSYSHGDSSAGFTKCLGSIWTGKDRYLWIDLSAGPVDYGPALSGDGVLPRGEFHP 271

Query: 261 LAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGADSS 320
           LAA HGRPKS+KALLADLASLV++AYQVL+VPSLRIPVYFE++L+VQFIH+YG E  DSS
Sbjct: 272 LAALHGRPKSEKALLADLASLVYNAYQVLIVPSLRIPVYFEDTLVVQFIHVYGSEVKDSS 331

Query: 321 GLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFD 380
           GLD + ++RTFMDEA   GLL+G+Q L+F++Y VN+ +CS+CSFA+S+ +NSYTSRFLFD
Sbjct: 332 GLDLEFVKRTFMDEAESGGLLLGEQKLSFKSYSVNYRECSICSFAVSRGMNSYTSRFLFD 391

Query: 381 NYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDS---GRVLPVYVFDLDSNSLLLLD 437
           NYT+IVSEYLDSK +H+ +++ AEE RRVAGI EE+     RVLPVYVFDLD N+ LLLD
Sbjct: 392 NYTLIVSEYLDSKHMHRALTDSAEELRRVAGIVEEEGNEFARVLPVYVFDLDINTPLLLD 451

Query: 438 RFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHL 497
           R+HQSVAFRDMVIAVRTR +QTVSDY+CNGRHVF HTR+LERPLVGSILQSMWGVS THL
Sbjct: 452 RYHQSVAFRDMVIAVRTRGTQTVSDYTCNGRHVFVHTRDLERPLVGSILQSMWGVSSTHL 511

Query: 498 LWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLE 557
            WS  HN TLVDYTWSIGQTPFGPFS+ISSLSFVQKDAA+RNV+LTSLN +I+SA+DV++
Sbjct: 512 TWSPRHNTTLVDYTWSIGQTPFGPFSDISSLSFVQKDAAKRNVILTSLNTTITSAIDVID 571

Query: 558 SIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTM 617
           S  A+GG+  L KQNR+ +F+QRWNL +YKLDK V+ALSH +FEMAL+YLRS+ HDLY++
Sbjct: 572 SAVAYGGDVILRKQNRHSEFMQRWNLMQYKLDKTVSALSHNEFEMALFYLRSASHDLYSV 631

Query: 618 HSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF 673
           HS+V+ A+Q +EASL CFKDPP PW ++S+S    +A+ YV++KRD+LFRNKRKQF
Sbjct: 632 HSVVYLASQRVEASLNCFKDPPFPWGTVSVSGFGLMAVGYVFSKRDRLFRNKRKQF 687

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552864|ref|XP_002517475.1| conserved hypothetical protein [Ricinus communis] gi|223543486|gb|EEF45017.1| conserved hypothetical protein [Ricinus communis]

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/480 (81%), Positives = 450/480 (93%), Gaps = 1/480 (0%)

Query: 194 LLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVL 253
           LL  G+++KNYAYSY+PG+SSPGFTKCLG+IWTGKERY+WIDL AGPVDYGPALSGDGVL
Sbjct: 139 LLPCGAQSKNYAYSYTPGDSSPGFTKCLGTIWTGKERYLWIDLSAGPVDYGPALSGDGVL 198

Query: 254 PKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYG 313
           P+GEFHPLAA HGRPKSQKALLADL+SL+WSAYQVL+VPSLRIPV+FE SLIV+FIH+YG
Sbjct: 199 PRGEFHPLAAMHGRPKSQKALLADLSSLIWSAYQVLLVPSLRIPVHFETSLIVEFIHVYG 258

Query: 314 LEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSY 373
            E +++ GLDWK+IE+ F DEA + GLL+GDQSL FR Y ++FADC +CSFA+S+SINSY
Sbjct: 259 SE-SNTGGLDWKAIEKNFRDEAGEEGLLLGDQSLVFRNYAIHFADCPICSFAVSRSINSY 317

Query: 374 TSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSL 433
           TSRFLFDNYT+IVSEY+DSKKLHQI+SE AEEFRR+AGIPEED GRVLPVYVFDLD N+L
Sbjct: 318 TSRFLFDNYTLIVSEYVDSKKLHQILSESAEEFRRMAGIPEEDFGRVLPVYVFDLDYNTL 377

Query: 434 LLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVS 493
           LLLDR+HQSVAFRDMVIAVRT+ +QTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVS
Sbjct: 378 LLLDRYHQSVAFRDMVIAVRTKTTQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVS 437

Query: 494 PTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAV 553
           PTHL WSS HNNTLVDYTWS+GQTPFGPFSE SSLSFVQKDAARRNVLLTSLNYSI+SA+
Sbjct: 438 PTHLSWSSRHNNTLVDYTWSVGQTPFGPFSETSSLSFVQKDAARRNVLLTSLNYSITSAI 497

Query: 554 DVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHD 613
           DVLESIAAHGG+R+LLKQ+++++F+QRWNLFKYKLDKAV+A+SH+DFEMALYY+RSSDHD
Sbjct: 498 DVLESIAAHGGDRKLLKQSQHVEFIQRWNLFKYKLDKAVSAMSHLDFEMALYYMRSSDHD 557

Query: 614 LYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF 673
           LY +HSLV+HA+Q+LEASL+CFKDPP PW S+S+SA+ F AL YV+ KRD+LFRNKRKQF
Sbjct: 558 LYAIHSLVYHASQDLEASLLCFKDPPFPWGSVSISAIGFFALFYVFAKRDKLFRNKRKQF 617

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573460|ref|XP_003554877.1| PREDICTED: uncharacterized protein LOC100818221 [Glycine max]

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/688 (63%), Positives = 536/688 (77%), Gaps = 30/688 (4%)

Query: 4   TTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPI 63
           T  +  FLLL T  ++A + GLD+FLT QS+IDP +SNDSF SL SS+K+ LS +     
Sbjct: 11  TLPVLAFLLLSTAISAAPIIGLDSFLTHQSRIDPQASNDSFLSLPSSIKTPLSHSL---- 66

Query: 64  PSLINSLLSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSS----RFHVISPSA 119
                S  SL          +     FP S + SLL ++LSAA ++     R H +    
Sbjct: 67  ---DFSSNSLLSLSLPISLSLHLLGDFP-SDTPSLLSAFLSAATTTHHPLPRHHPLRLPP 122

Query: 120 TTSSHSLAISHSPHFDISVSP------SLASHLSQTLDSLLASTPSSLRSPLLSIPYSSI 173
           ++ + SL+ + S    I  SP      SL + LSQTL S L STPSSLRSPLL+IP+SSI
Sbjct: 123 SSPTPSLSPTLS----IFSSPPSQTLTSLTNSLSQTLTSHLHSTPSSLRSPLLTIPHSSI 178

Query: 174 DEIVKQDFEKEK---HVNGIYIYLLNL----GSKAKNYAYSYSPGESSPGFTKCLGSIWT 226
           D+I++  F  +    + N +++YLLNL     S +K YAYSYSPG+SS   TKC G+ +T
Sbjct: 179 DQIIQNHFITQNPNPNPNQVHLYLLNLPPASSSNSKAYAYSYSPGDSSAAVTKCSGTFFT 238

Query: 227 GKERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAY 286
              RY WIDL AGPVDYGPA+SGDGV+P+GEFHPLAA HGRPKS KA  ADLASLVWSAY
Sbjct: 239 SSHRYFWIDLRAGPVDYGPAISGDGVIPRGEFHPLAALHGRPKSNKAFAADLASLVWSAY 298

Query: 287 QVLVVPSLRIPVYFENSLIVQFIHIYGL-EGADSSGLDWKSIERTFMDEANDNGLLVGDQ 345
            V + PSLRI V FE SL++QFIHI+G  +  D +GLDWKSIE++F  E+  +GLL+GDQ
Sbjct: 299 HVFLAPSLRISVPFEKSLVIQFIHIHGGNDNKDLAGLDWKSIEKSFRFESKSSGLLLGDQ 358

Query: 346 SLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEE 405
           SL+FR +++ +++CS+CSFAIS+SINSYTSRFLFDNYT+IVSEYLDSK+LHQI+S+  +E
Sbjct: 359 SLSFRQHEIRYSECSICSFAISRSINSYTSRFLFDNYTLIVSEYLDSKRLHQILSDSGDE 418

Query: 406 FRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSC 465
            R++AG+ EED GRV+PVYVFDLD  SLLLLDR+HQSVAF+DMVIAVRTRN+QTVSDYSC
Sbjct: 419 LRKLAGVLEEDFGRVVPVYVFDLDYTSLLLLDRYHQSVAFKDMVIAVRTRNTQTVSDYSC 478

Query: 466 NGRHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEI 525
           NGRHVFT TRELERP+VGSILQSMWGVSPTHL WS  HN TLVDYTWS+GQTPFGPFSE+
Sbjct: 479 NGRHVFTQTRELERPIVGSILQSMWGVSPTHLNWSPQHNETLVDYTWSMGQTPFGPFSEM 538

Query: 526 SSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFK 585
            SLSFVQKDAARRNVLLTSLNYSI+SA+DVL+S+  HGG + LLKQ ++++FVQRWNLFK
Sbjct: 539 LSLSFVQKDAARRNVLLTSLNYSITSAIDVLQSVETHGGAKNLLKQKQHVEFVQRWNLFK 598

Query: 586 YKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASI 645
           YKL+KA++ALSH+DFEMAL+YLRSSDHDLY +HS+V+HA+QE+EASLVCF+DPP PW S+
Sbjct: 599 YKLNKAMSALSHLDFEMALFYLRSSDHDLYAIHSIVYHASQEIEASLVCFRDPPFPWGSV 658

Query: 646 SMSAVVFLALSYVYTKRDQLFRNKRKQF 673
            +SA  FL++SY+Y +RD+LFRNKRKQF
Sbjct: 659 LLSASAFLSVSYIYARRDKLFRNKRKQF 686

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866284|emb|CAN79924.1| hypothetical protein VITISV_042444 [Vitis vinifera]

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/656 (65%), Positives = 503/656 (76%), Gaps = 66/656 (10%)

Query: 19  SASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINSLLSLSLPIS 78
           S+ + GLD+FL++QS++DP ++NDSF SL S L  +L + T       + S L LSL +S
Sbjct: 25  SSPILGLDSFLSQQSRLDPQATNDSFLSLPSHLXKTLFSXTTHH--RHLISSLQLSLSVS 82

Query: 79  IHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDISV 138
           +H+ LVGP  SFP S + SLL S+LSA  SS  FHVISP +T   H     HS H D+S+
Sbjct: 83  LHVILVGP--SFP-SDAPSLLSSFLSAVSSSDHFHVISPFSTDHRH--LTKHSLHLDVSL 137

Query: 139 SPSLAS-HLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQDFEKEKHVNGIYIYLLNL 197
           SP   S  +S  L S +++TP+SLRS L+SIPY+++D I++Q FEKEK    +YIYLLNL
Sbjct: 138 SPPSLSSQVSDALRSQISNTPNSLRSSLISIPYAAVDNIIRQHFEKEKPHQEVYIYLLNL 197

Query: 198 GSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLPKGE 257
           G ++K+YAY+Y  GESSP FTKC GS+WTGK+RY+W+DL AGPVDYGPALSGDGVLP+GE
Sbjct: 198 GPQSKSYAYNYGSGESSPAFTKCFGSLWTGKDRYLWVDLAAGPVDYGPALSGDGVLPRGE 257

Query: 258 FHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGLEGA 317
           FHPLA+ HGRPKSQKALLAD ASLV+SAYQ     SLR   Y                  
Sbjct: 258 FHPLASLHGRPKSQKALLADFASLVYSAYQ-----SLRFKTY------------------ 294

Query: 318 DSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRF 377
                                              ++ +ADC++CSFAIS+S NSYTSRF
Sbjct: 295 -----------------------------------ELRYADCAICSFAISRSTNSYTSRF 319

Query: 378 LFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFDLDSNSLLLLD 437
           LFDNYT+IVSEYLDSK+LHQI+S+ AEEFRR A IPEED GRVLPVYVFDLD N+LLLLD
Sbjct: 320 LFDNYTLIVSEYLDSKRLHQILSDSAEEFRRFANIPEEDFGRVLPVYVFDLDHNALLLLD 379

Query: 438 RFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHL 497
           R+HQSVAF+DMVIAVRTRN+QTVSDYSCNGRH+FT TRELERPLVGSILQSMWGVSPTHL
Sbjct: 380 RYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHMFTQTRELERPLVGSILQSMWGVSPTHL 439

Query: 498 LWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLE 557
            WS  HN+TLVDYTWS+GQTPFGPFSE  SLSFVQKDAARRN+LLTSLNYS++SA+DVLE
Sbjct: 440 SWSPRHNSTLVDYTWSVGQTPFGPFSETLSLSFVQKDAARRNILLTSLNYSLTSAIDVLE 499

Query: 558 SIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTM 617
           SIAA GGER LLK NR+++FVQRWNLFKYKLDKAV++LSH DFEMALY+LRSSDHDLY +
Sbjct: 500 SIAAXGGERNLLKHNRHVEFVQRWNLFKYKLDKAVSSLSHFDFEMALYFLRSSDHDLYAI 559

Query: 618 HSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRKQF 673
           HSLV+HA+QE+EASLVCFKDPP PWAS S S VV  AL YVYTKRD+LFRNKRKQF
Sbjct: 560 HSLVYHASQEMEASLVCFKDPPFPWASFSGSVVVVFALFYVYTKRDKLFRNKRKQF 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223945159|gb|ACN26663.1| unknown [Zea mays] gi|413954412|gb|AFW87061.1| hypothetical protein ZEAMMB73_887138 [Zea mays]

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/686 (54%), Positives = 505/686 (73%), Gaps = 33/686 (4%)

Query: 2   PWTTAISLFLL--LLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAAT 59
           P  T I  FLL  L     + +  GLD F    +  DP + ND+F +L ++L+ +LSA T
Sbjct: 5   PPQTLILFFLLASLAPAVTAVAFSGLDAFFASAAARDPSAGNDTFAALPAALRRALSART 64

Query: 60  PPPIPSLINSL-LSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPS 118
                SL+ S  L+LS  + +H+RL G  SSFP S+  SL  S ++AA SS++F      
Sbjct: 65  -----SLLPSFFLNLSATVPVHVRLAG--SSFPASSGRSL-PSLVNAAVSSAQF-----L 111

Query: 119 ATTSSHSLAISHSPHFDIS---VSPSLASHLSQTLDSLLASTPSSLRSPLLS-IPYSSID 174
           ++   H LA+SH+ H D++    +  LAS     + + L  +P+   +  LS +PYS +D
Sbjct: 112 SSRRPHRLAVSHTLHLDVTGPVAASKLASKAGAAVRAHLDKSPAPFHNNALSGVPYSLVD 171

Query: 175 EIVKQDFEK---EKHVNGIYIYLLNLGSKAKNYAY---SYSPGESSPGFTKCLGSIWTGK 228
           ++V +D+           +YIYLL+LG +++ YAY   S     SSPG+++CLG +W GK
Sbjct: 172 DLVAEDYRALAGSGPAEAVYIYLLDLGKQSRQYAYTAASSGTDASSPGYSRCLGPVWAGK 231

Query: 229 ERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQV 288
            RY+WIDLGAGPV+YGPALSGDGVLP+GEFHPLA  HGRPKS+KALLADLASLV SAY+ 
Sbjct: 232 NRYIWIDLGAGPVNYGPALSGDGVLPRGEFHPLATLHGRPKSEKALLADLASLVLSAYKS 291

Query: 289 LVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLN 348
           L+VPSLRIPV++ENSL+++FIHI+G +  +  GLD++ IE++      D  L  G QSL 
Sbjct: 292 LLVPSLRIPVHYENSLLIRFIHIHG-DRKEEEGLDFRVIEQSI----RDGDLPYGGQSLK 346

Query: 349 FRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRR 408
           F  + V +++C +CSFA+++S NS+TSRFLF+NYT+IV+EYLDSK+L Q++S+ ++E  R
Sbjct: 347 FDLHTVKYSECPICSFAVARSTNSFTSRFLFENYTLIVNEYLDSKRLRQVLSDSSDEIHR 406

Query: 409 VAGIPEE-DSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNG 467
           +AG+ E  +  +V+PVYVFDLD + LL LDR+HQ+VAF DMV+AVRTR+SQTVSDY+CNG
Sbjct: 407 LAGVHENYEHDKVVPVYVFDLDYDKLLPLDRYHQAVAFGDMVVAVRTRSSQTVSDYTCNG 466

Query: 468 RHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISS 527
           RHV T TR LER ++GS+LQSMWGVSPTHL WS  H+ T+VDYTWS G TPFGPFSE  S
Sbjct: 467 RHVLTMTRNLERAIIGSLLQSMWGVSPTHLSWSPEHHATVVDYTWSTGHTPFGPFSETKS 526

Query: 528 LSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYK 587
           LSFVQKDAARRNVLLT+LNY+I+S +DVLES+ AHGGE ++L++ R+++F+QRWNL  YK
Sbjct: 527 LSFVQKDAARRNVLLTTLNYTITSTIDVLESMVAHGGE-KILRKKRHVEFIQRWNLLTYK 585

Query: 588 LDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISM 647
           L+K V+A+S +D++ A+YYLRSSDHDLY +HSLV+ A+QELEASLVCFKDPP PW S+SM
Sbjct: 586 LEKVVSAMSRLDYDKAMYYLRSSDHDLYEIHSLVYQASQELEASLVCFKDPPFPWVSVSM 645

Query: 648 SAVVFLALSYVYTKRDQLFRNKRKQF 673
           S +      Y+Y+KRD+LFR+KRKQF
Sbjct: 646 SGLFVFGFFYMYSKRDKLFRSKRKQF 671

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242093430|ref|XP_002437205.1| hypothetical protein SORBIDRAFT_10g022840 [Sorghum bicolor] gi|241915428|gb|EER88572.1| hypothetical protein SORBIDRAFT_10g022840 [Sorghum bicolor]

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/663 (56%), Positives = 497/663 (74%), Gaps = 32/663 (4%)

Query: 24  GLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATPPPIPSLINS-LLSLSLPISIHIR 82
           GLD FL+  +  DP   ND+F +L ++L+ +LSA T     SL+ S LL+LS  + +H+R
Sbjct: 30  GLDAFLSSAAARDPSGGNDTFAALPAALRRALSART-----SLLPSFLLNLSATVPVHVR 84

Query: 83  LVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAISHSPHFDIS---VS 139
           L G  SSFP S+  SL  S ++AA SS+ F      ++   H LA+SH+ H D++    +
Sbjct: 85  LAG--SSFPASSGRSL-PSLVNAAVSSAHF-----LSSRRPHRLAVSHTLHLDVTGPVAA 136

Query: 140 PSLASHLSQTLDSLLASTPSSLRSPLLS-IPYSSIDEIVKQDFEK---EKHVNGIYIYLL 195
             LAS     + + L  +P+      LS +PYS +D++V +D+           +YIYLL
Sbjct: 137 SKLASSAGAAVRAHLDKSPAPFHHNALSAVPYSLVDDLVAEDYRALAGSGPAEAVYIYLL 196

Query: 196 NLGSKAKNYAYSYSPGESS---PGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGV 252
           +LG + + YAY+ +   +    PG+++CLG +W GK+RY+WIDLGAGPV+YGPALSGDGV
Sbjct: 197 DLGKQPRQYAYTAASSGADASSPGYSRCLGPVWAGKDRYIWIDLGAGPVNYGPALSGDGV 256

Query: 253 LPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIY 312
           LP+GEFHPLA  HGRPKS+KALLADLASLV SAY+ L+VPSLRIPV++ENSL+++FIHI+
Sbjct: 257 LPRGEFHPLATLHGRPKSEKALLADLASLVLSAYKSLLVPSLRIPVHYENSLLIRFIHIH 316

Query: 313 G-LEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSIN 371
           G L+ AD  GLD+  IE++         L  G QSL F  + V +++C +CSFAI++S N
Sbjct: 317 GDLKEAD--GLDFGVIEQSI----RYGDLPYGGQSLKFDMHTVKYSECPICSFAIARSTN 370

Query: 372 SYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEE-DSGRVLPVYVFDLDS 430
           S+T+RFLF+NYT+IVSEYLDSK+L Q++S+ A+E  R+AG+ E  +  +V+PV+VFDLD 
Sbjct: 371 SFTARFLFENYTLIVSEYLDSKRLRQVLSDSADEIHRLAGVHENYEHDKVVPVFVFDLDY 430

Query: 431 NSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMW 490
           + LL LDR+HQ+VAF DMV+AVRTR+SQTVSDY+CNGRHV T TR LERP++GS+LQSMW
Sbjct: 431 DKLLPLDRYHQAVAFGDMVVAVRTRSSQTVSDYTCNGRHVLTMTRNLERPIIGSVLQSMW 490

Query: 491 GVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSIS 550
           GVSPTHL WS  HN T+VDYTWS G TPFGPFSE  SLSFVQKDAARRNVLLT+LNY+I+
Sbjct: 491 GVSPTHLSWSPEHNATVVDYTWSTGHTPFGPFSETKSLSFVQKDAARRNVLLTTLNYTIT 550

Query: 551 SAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSS 610
           S +D+LES+AAHGGE+ LL++ R+++F QRWNL  YKL+K ++A+S +D++ ALY+LRSS
Sbjct: 551 STIDILESMAAHGGEKILLRKKRHVEFNQRWNLLTYKLEKVISAMSRLDYDKALYFLRSS 610

Query: 611 DHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKR 670
           DHDLY +HSLV+ A+QELEASLVCFKDPP PW S+SMS V      YVY+KRD+LFR+KR
Sbjct: 611 DHDLYEIHSLVYQASQELEASLVCFKDPPFPWVSVSMSGVFVFGFFYVYSKRDKLFRSKR 670

Query: 671 KQF 673
           KQF
Sbjct: 671 KQF 673

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226507406|ref|NP_001145995.1| uncharacterized protein LOC100279525 precursor [Zea mays] gi|219885253|gb|ACL53001.1| unknown [Zea mays]

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/686 (54%), Positives = 504/686 (73%), Gaps = 33/686 (4%)

Query: 2   PWTTAISLFLL--LLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAAT 59
           P  T I  FLL  L     + +  GLD F    +  DP + ND+F +L ++L+ +L A T
Sbjct: 5   PPQTLILFFLLASLAPAVTAVAFSGLDAFFASAAARDPSAGNDTFAALPAALRRALPART 64

Query: 60  PPPIPSLINSL-LSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPS 118
                SL+ S  L+LS  + +H+RL G  SSFP S+  SL  S ++AA SS++F      
Sbjct: 65  -----SLLPSFFLNLSATVPVHVRLAG--SSFPASSGRSL-PSLVNAAVSSAQF-----L 111

Query: 119 ATTSSHSLAISHSPHFDIS---VSPSLASHLSQTLDSLLASTPSSLRSPLLS-IPYSSID 174
           ++   H LA+SH+ H D++    +  LAS     + + L  +P+   +  LS +PYS +D
Sbjct: 112 SSRRPHRLAVSHTLHLDVTGPVAASKLASKAGAAVRAHLDKSPAPFHNNALSGVPYSLVD 171

Query: 175 EIVKQDFEK---EKHVNGIYIYLLNLGSKAKNYAY---SYSPGESSPGFTKCLGSIWTGK 228
           ++V +D+           +YIYLL+LG +++ YAY   S     SSPG+++CLG +W GK
Sbjct: 172 DLVAEDYRALAGSGPAEAVYIYLLDLGKQSRQYAYTAASSGTDASSPGYSRCLGPVWAGK 231

Query: 229 ERYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQV 288
            RY+WIDLGAGPV+YGPALSGDGVLP+GEFHPLA  HGRPKS+KALLADLASLV SAY+ 
Sbjct: 232 NRYIWIDLGAGPVNYGPALSGDGVLPRGEFHPLATLHGRPKSEKALLADLASLVLSAYKS 291

Query: 289 LVVPSLRIPVYFENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLN 348
           L+VPSLRIPV++ENSL+++FIHI+G +  +  GLD++ IE++      D  L  G QSL 
Sbjct: 292 LLVPSLRIPVHYENSLLIRFIHIHG-DRKEEEGLDFRVIEQSI----RDGDLPYGGQSLK 346

Query: 349 FRTYKVNFADCSVCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRR 408
           F  + V +++C +CSFA+++S NS+TSRFLF+NYT+IV+EYLDSK+L Q++S+ ++E  R
Sbjct: 347 FDLHTVKYSECPICSFAVARSTNSFTSRFLFENYTLIVNEYLDSKRLRQVLSDSSDEIHR 406

Query: 409 VAGIPEE-DSGRVLPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNG 467
           +AG+ E  +  +V+PVYVFDLD + LL LDR+HQ+VAF DMV+AVRTR+SQTVSDY+CNG
Sbjct: 407 LAGVHENYEHDKVVPVYVFDLDYDKLLPLDRYHQAVAFGDMVVAVRTRSSQTVSDYTCNG 466

Query: 468 RHVFTHTRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISS 527
           RHV T TR LER ++GS+LQSMWGVSPTHL WS  H+ T+VDYTWS G TPFGPFSE  S
Sbjct: 467 RHVLTMTRNLERAIIGSLLQSMWGVSPTHLSWSPEHHATVVDYTWSTGHTPFGPFSETKS 526

Query: 528 LSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYK 587
           LSFVQKDAARRNVLLT+LNY+I+S +DVLES+ AHGGE ++L++ R+++F+QRWNL  YK
Sbjct: 527 LSFVQKDAARRNVLLTTLNYTITSTIDVLESMVAHGGE-KILRKKRHVEFIQRWNLLTYK 585

Query: 588 LDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISM 647
           L+K V+A+S +D++ A+YYLRSSDHDLY +HSLV+ A+QELEASLVCFKDPP PW S+SM
Sbjct: 586 LEKVVSAMSRLDYDKAMYYLRSSDHDLYEIHSLVYQASQELEASLVCFKDPPFPWVSVSM 645

Query: 648 SAVVFLALSYVYTKRDQLFRNKRKQF 673
           S +      Y+Y+KRD+LFR+KRKQF
Sbjct: 646 SGLFVFGFFYMYSKRDKLFRSKRKQF 671

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	673
TAIR|locus:2098423	687	AT3G28720 "AT3G28720" [Arabido	0.968	0.949	0.607	3.2e-216
DICTYBASE|DDB_G0279945	641	DDB_G0279945 [Dictyostelium di	0.695	0.730	0.235	2.5e-27
TAIR|locus:2155846	945	AT5G58100 [Arabidopsis thalian	0.463	0.330	0.230	1.8e-19
DICTYBASE|DDB_G0285083	1020	DDB_G0285083 [Dictyostelium di	0.202	0.133	0.210	1.9e-07

TAIR|locus:2098423 AT3G28720 "AT3G28720" [Arabidopsis thaliana (taxid:3702)]

 Score = 2089 (740.4 bits), Expect = 3.2e-216, P = 3.2e-216
 Identities = 402/662 (60%), Positives = 492/662 (74%)

Query:    18 NSASVPGLDTFLTRQSQIDPHSSNDXXXXXXXXXXXXXXAATXXXXXXXXXXXXXXXXXX 77
             +S  +PGLDTFLT Q ++DP SSND              +++                  
Sbjct:    30 SSPPIPGLDTFLTNQYRLDPKSSNDSFTSLSSSLKRSLSSSSIHFSSLSKSLLSLSISIP 89

Query:    78 XXXXRLVGXXXXXXXXXXXXXXXXXXXXXXXXXRFHVISPSATTSS-HSLAISHSPHFDI 136
                 R +G                          FHVISPS  +S+ H L ISHS H D 
Sbjct:    90 LNV-RFIGDSFPSSAASTLSEFISAAVTND---NFHVISPSPDSSTNHKLVISHSLHLDA 145

Query:   137 SVSP-SLASHLSQTLDXXXXXXXXXXXXXXXXXXXXXIDEIVKQDFEKEKHVNG-IYIYL 194
             S+SP SL++ L  TL                      IDEI+KQ++EKEKH +G +YIYL
Sbjct:   146 SLSPQSLSTRLDSTLKTLISSTTSSLRSNLLSIQYNPIDEIIKQEYEKEKHGDGGVYIYL 205

Query:   195 LNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLP 254
             ++LGS+AK YAYSYS G+SS GFTKCLGSIWTGK+RY+WIDL AGPVDYGPALSGDGVLP
Sbjct:   206 ISLGSQAKPYAYSYSHGDSSAGFTKCLGSIWTGKDRYLWIDLSAGPVDYGPALSGDGVLP 265

Query:   255 KGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGL 314
             +GEFHPLAA HGRPKS+KALLADLASLV++AYQVL+VPSLRIPVYFE++L+VQFIH+YG 
Sbjct:   266 RGEFHPLAALHGRPKSEKALLADLASLVYNAYQVLIVPSLRIPVYFEDTLVVQFIHVYGS 325

Query:   315 EGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYT 374
             E  DSSGLD + ++RTFMDEA   GLL+G+Q L+F++Y VN+ +CS+CSFA+S+ +NSYT
Sbjct:   326 EVKDSSGLDLEFVKRTFMDEAESGGLLLGEQKLSFKSYSVNYRECSICSFAVSRGMNSYT 385

Query:   375 SRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSG---RVLPVYVFXXXXX 431
             SRFLFDNYT+IVSEYLDSK +H+ +++ AEE RRVAGI EE+     RVLPVYVF     
Sbjct:   386 SRFLFDNYTLIVSEYLDSKHMHRALTDSAEELRRVAGIVEEEGNEFARVLPVYVFDLDIN 445

Query:   432 XXXXXXRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWG 491
                   R+HQSVAFRDMVIAVRTR +QTVSDY+CNGRHVF HTR+LERPLVGSILQSMWG
Sbjct:   446 TPLLLDRYHQSVAFRDMVIAVRTRGTQTVSDYTCNGRHVFVHTRDLERPLVGSILQSMWG 505

Query:   492 VSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISS 551
             VS THL WS  HN TLVDYTWSIGQTPFGPFS+ISSLSFVQKDAA+RNV+LTSLN +I+S
Sbjct:   506 VSSTHLTWSPRHNTTLVDYTWSIGQTPFGPFSDISSLSFVQKDAAKRNVILTSLNTTITS 565

Query:   552 AVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSD 611
             A+DV++S  A+GG+  L KQNR+ +F+QRWNL +YKLDK V+ALSH +FEMAL+YLRS+ 
Sbjct:   566 AIDVIDSAVAYGGDVILRKQNRHSEFMQRWNLMQYKLDKTVSALSHNEFEMALFYLRSAS 625

Query:   612 HDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRK 671
             HDLY++HS+V+ A+Q +EASL CFKDPP PW ++S+S    +A+ YV++KRD+LFRNKRK
Sbjct:   626 HDLYSVHSVVYLASQRVEASLNCFKDPPFPWGTVSVSGFGLMAVGYVFSKRDRLFRNKRK 685

Query:   672 QF 673
             QF
Sbjct:   686 QF 687

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0279945 DDB_G0279945 [Dictyostelium discoideum (taxid:44689)]

 Score = 333 (122.3 bits), Expect = 2.5e-27, P = 2.5e-27
 Identities = 126/536 (23%), Positives = 247/536 (46%)

Query:   173 IDEIVKQDFEKEKHVNGIYIYLLN-LGSKAKNYA-YSYSPGESSP-------GFTK---- 219
             +D I+ QD++++ H++ + +Y++N +  +  +   Y+YS   S+        G       
Sbjct:   132 VDNIIAQDYKQQNHISYV-VYIINTIYDREDSIEKYTYSQLNSTTINTLHRDGINVVDHL 190

Query:   220 CLGSIWTGKE--------------RYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFH 265
             C   +W  K               RYVWID+GA    YGP   G G++   +  P    H
Sbjct:   191 CNVKLWQSKSESPNNPNNSNDGSGRYVWIDIGAETCTYGPQTKGTGLISNQQL-P----H 245

Query:   266 GRPKSQKALLADLASLVWSAYQVLVVPSL-RIP-----VYFENSLIVQFIHIYG-LEGAD 318
                +  K L  D+++  +   + L+ P +  IP     +  E  LI+   H+ G LE ++
Sbjct:   246 TNSRFTKKLY-DISTFFYHTIRQLISPPIYEIPEKYGWIDLEIQLIMIHDHLVGQLEVSE 304

Query:   319 SSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFL 378
                 DW+SI+    ++  +   L+ +Q + F   +V+  +    +     S+ ++ S  +
Sbjct:   305 Q--FDWESIK----EQLGEKMPLLPNQRITFSKREVSLLNNLYAAQIKQSSLKTHHS--V 356

Query:   379 FDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFXXXXXXXXXXXR 438
                      ++LDSK+LH       ++F  +    ++ S  ++P+++F           R
Sbjct:   357 LKG----TQQFLDSKELHHWFKVHIQKF--IPSYLDDSSKTIIPIFLFDISYKELLLLDR 410

Query:   439 FHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLL 498
             ++Q+V+F DMVI ++T++     DY C+ + +  +  +  +P++ S+L ++WGV    L+
Sbjct:   411 YYQAVSFPDMVIGIQTQSGLMKIDYQCD-KQLGINPMDATKPILQSLLMTIWGVGSNSLV 469

Query:   499 WSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLES 558
              +        ++ W+IG  P   F+ +  LSF Q D+A RN L     + I S++D L+S
Sbjct:   470 VNENSKQIENNFIWNIGYNPSNMFTNLKDLSFSQTDSAIRNYLY----FDIISSIDSLKS 525

Query:   559 IAAHGGERRLLKQNRY-LD--FVQRWNLFKYKLDKAVTAL-SHMDF-EMALYYLRSSD-H 612
             I  H G+    ++  + +D   V+  + F   ++  +T + S++   + +  Y R +   
Sbjct:   526 IMDHIGDDETWEEFTHSIDNPSVRSIDSFFKSINSTITQINSNLQLHQYSKAYDRINQLS 585

Query:   613 DL-YTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVY-TKRDQLF 666
             DL   + S++H       + L C K   +    IS+S    + + ++Y   R  LF
Sbjct:   586 DLAMNISSVIHKIHSSKHSYLECEKSTFLLSEFISISFTTIIVIYFLYKVLRKSLF 641

GO:0031154 "culmination involved in sorocarp development" evidence=IMP

GO:0044351 "macropinocytosis" evidence=RCA

TAIR|locus:2155846 AT5G58100 [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
 Identities = 76/330 (23%), Positives = 140/330 (42%)

Query:   264 FHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVY--FEN-SLIVQFIHIYGLEGADSS 320
             F     ++   LA L + +W + + ++ PS+    +  +E  S  + FI    +      
Sbjct:   538 FQNYTVARDTFLAHLGATLWGSMRHIISPSVADGAFHHYEKISFQLVFITQEKVRQIKQL 597

Query:   321 GLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFD 380
              +D K++    MD  +   LL+  Q   F  + +  ++    + A S +  +     L  
Sbjct:   598 PVDLKAL----MDGLSS--LLLPSQKPLFSQHMLTLSEDPALAMAFSVARRAAAVPLLLV 651

Query:   381 N--YTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFXXXXXXXXXXXR 438
             N  Y   V  YLDS  L   +  + +      G     S   L + +F           +
Sbjct:   652 NGTYRKTVRSYLDSSILQYQLQRVNDHTSLKGG--HAHSRSTLEIPIFWLISGDPLLIDK 709

Query:   439 FHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLL 498
              +Q+ A  +MV+ V++  S   S   CNGR +    R   +  + S+ + + G+ P HL+
Sbjct:   710 HYQAKALSNMVVVVQSEASSWESHLQCNGRSLLWDLRSPVKAAMASVAEHLAGLLPLHLV 769

Query:   499 WSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLES 558
             +S  H + + D+TWS+G  PF   S+   LS  Q D   R+ ++T+L  SI +    +  
Sbjct:   770 YSVAHESAIEDWTWSVGCNPFSVTSQGWLLSQFQSDTIARSYMITALEESIQAVNSGIHL 829

Query:   559 IAAHGGERRLLK--QNRYLDFVQRWNLFKY 586
             +      ++  K  Q+R  + +   N +KY
Sbjct:   830 LRLERTNKKTFKLFQSRERELM---NKYKY 856

GO:0005739 "mitochondrion" evidence=ISM

GO:0010584 "pollen exine formation" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0285083 DDB_G0285083 [Dictyostelium discoideum (taxid:44689)]

 Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 29/138 (21%), Positives = 63/138 (45%)

Query:   414 EEDSGRVLPVYVFXXXXXXXXXXXRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTH 473
             +E+  + +P+++F           + HQ+ +  +MVIA++T    + S ++ N   +  +
Sbjct:   752 KENQVKYIPIFLFSISTNNSILIDKTHQAKSLSNMVIAIQTNVFSSNSTFTVNDNQLKYY 811

Query:   474 TRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSF--V 531
                    ++ +   ++ G+   H+ +S  H     ++ WS+G +P    +      F   
Sbjct:   812 PINPLSSILSATALNLGGLVGNHISYSEAHGAATSNWHWSVGDSPTSKTTTYPFTHFNEF 871

Query:   532 QKDAARRNVLLTSLNYSI 549
             Q+D   RN + +SL  SI
Sbjct:   872 QRDTIFRNYIASSLERSI 889

GO:0030587 "sorocarp development" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00170333 hypothetical protein (673 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	673
PF09577	232	Spore_YpjB: Sporulation protein YpjB (SpoYpjB); In	86.54
TIGR02878	233	spore_ypjB sporulation protein YpjB. Members of th	81.46

>PF09577 Spore_YpjB: Sporulation protein YpjB (SpoYpjB); InterPro: IPR014231 Proteins in thie entry, typified by YpjB, are restricted to a subset of the endospore-forming bacteria which includes Bacillus species, but not species

Probab=86.54  E-value=3.1  Score=43.52  Aligned_cols=129  Identities=17%  Similarity=0.303  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchhcccchhHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHhccc---chhhH
Q 005854          541 LLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSDH---DLYTM  617 (673)
Q Consensus       541 i~t~Ld~SI~sai~~L~s~~~~~~~~~ll~~~~~~e~~~r~n~v~~kl~r~~sa~s~ldf~~Al~~l~~a~~---d~~a~  617 (673)
                      +-...+.+|...++.|+.....|+. +.++ ..-.+|.+.|..+.=.+.-....-..-+.+.-+.|+....-   +-...
T Consensus        95 LW~~~e~~i~~~~~~mk~a~~~~~~-~~f~-~~~n~f~~~y~~I~Psl~I~~~~~~v~~v~s~i~yl~~~~~~~~~~~~~  172 (232)
T PF09577_consen   95 LWLQYEKPIMEDFQRMKQAAQKGDK-EAFR-ASLNEFLSHYELIRPSLTIDRPPEQVQRVDSHISYLERLRFQQLDQKEV  172 (232)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCH-HHHH-HHHHHHHHHHHHhcchhhccCCHHHHHHHHHHHHHHHHhhhcccChHHH
Confidence            4556677777888888877776654 2234 44567777777664222111111001111111333333211   11112


Q ss_pred             hHHHHHhhHhhhhcccccc----ccCCCcchhhhHHHHHHHHHHhhhchhhHhhhhhc
Q 005854          618 HSLVHHATQELEASLVCFK----DPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRK  671 (673)
Q Consensus       618 ~~~~~~a~~~lea~l~C~~----d~~~~w~~v~~~~v~~~~~~~~~~~~~~~~~~~~~  671 (673)
                      ..-..+..+.+...+.-.+    ||++-|.+++++++.+++|.||=+|.=|==+.|||
T Consensus       173 ~~~l~~le~~l~~lF~~~k~d~~dpsl~Wv~l~iG~iIi~tLtYvGwRKYrgek~~~k  230 (232)
T PF09577_consen  173 QEALEQLEEDLQKLFDGVKEDEADPSLIWVMLSIGGIIIATLTYVGWRKYRGEKEKRK  230 (232)
T ss_pred             HHHHHHHHHHHHHHhCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            2222333333333332222    68999999999999999999998877666566665

In Bacillus subtilis, ypjB was found to be part of the sigma-E regulon []. Sigma-E is a sporulation sigma factor that regulates expression in the mother cell compartment. Null mutants of ypjB show a sporulation defect, but this gene is not, however, a part of the endospore formation minimal gene set.

>TIGR02878 spore_ypjB sporulation protein YpjB

Probab=81.46  E-value=5.3  Score=41.94  Aligned_cols=119  Identities=22%  Similarity=0.329  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchhcccchhHHHHHHHHHHH------------HHHHHHHHHhccCCHHHH-----
Q 005854          541 LLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFK------------YKLDKAVTALSHMDFEMA-----  603 (673)
Q Consensus       541 i~t~Ld~SI~sai~~L~s~~~~~~~~~ll~~~~~~e~~~r~n~v~------------~kl~r~~sa~s~ldf~~A-----  603 (673)
                      +-...+.+|-.+++.|+.....|+. ..|+ ..-++|++.|..+.            .+.+..++.+.+++|...     
T Consensus        96 LW~~~e~~im~~f~~mk~a~~~~~~-~~f~-~~ln~Fl~~Y~~I~PSl~Idl~~~~~q~v~~~i~~l~~~r~~~~~~~~~  173 (233)
T TIGR02878        96 LWGSLEKPVMEAFTELEKAAQKEDS-QAFQ-EKLNEFLSLYDLIYPSLTIDVPEDQVQRVDSHLSYLENFRFQQRSEDEK  173 (233)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCH-HHHH-HHHHHHHHHhhhcccceeeecCHHHHHHHHHHHHHHHhhhhhccChHHH
Confidence            3445566666777777766655554 3344 45678888888764            344555555556655532     


Q ss_pred             HHHHHhcccchhhHhHHHHHhhHhhhhccccccccCCCcchhhhHHHHHHHHHHhhhchhhHhhhhhc
Q 005854          604 LYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRK  671 (673)
Q Consensus       604 l~~l~~a~~d~~a~~~~~~~a~~~lea~l~C~~d~~~~w~~v~~~~v~~~~~~~~~~~~~~~~~~~~~  671 (673)
                      +.-|+.++.|+.   .+|..+.+.       --||.+=|.+++..++.|+.|-||=+|.=|==+.|||
T Consensus       174 ~~~L~~~~~dl~---~lF~~vkkD-------~aDPSLiWvmistGg~IvltLTYVGwRKYkgEKek~k  231 (233)
T TIGR02878       174 EEQLSLMRGDLK---ALFDGVKED-------EADPSLLWVMISTGGIIVATLTYVGWRKYKGEKEKVK  231 (233)
T ss_pred             HHHHHHHHHHHH---HHHcccccC-------CCCcHHHHHHHHhhHHHHHHHhhhhhhhhhhHhhhhc
Confidence            555666666644   222222111       2268899999999999999999998887666555555

Members of this protein, YpjB, family are restricted to a subset of endospore-forming bacteria, including Bacillus species but not CLostridium or some others. In Bacillus subtilis, ypjB was found to be part of the sigma-E regulon, where sigma-E is a sporulation sigma factor that regulates expression in the mother cell compartment. Null mutants of ypjB show a sporulation defect. This protein family is not, however, a part of the endospore formation minimal gene set.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	673
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 2e-08
 Identities = 86/619 (13%), Positives = 154/619 (24%), Gaps = 202/619 (32%)

Query: 130 HSPHFDISVSP------SLASHLSQTL--DSLLASTPSSLRSPLLSIPYSSIDEIVKQDF 181
           H  H D            + S        +          +S L       ID I+    
Sbjct: 3   HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK---EEIDHIIMSKD 59

Query: 182 EKEKHVNGIYIYLLNLGSKA----------KNYAYSYS--------PGESSPGFTKCLGS 223
                   ++  LL+   +            NY +  S        P   +  + +    
Sbjct: 60  AVSG-TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 224 IWTGKERY----VW--------------IDLGAGPVDYGPALSGDG-------VLPKGEF 258
           ++   + +    V               +      +  G    G G       V    + 
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL--GSGKTWVALDVCLSYKV 176

Query: 259 HPLAAFH------GRPKSQKALLADLASL---VWSAYQVLVVPSLRIPVYFENSLIVQFI 309
                F           S + +L  L  L   +   +      S  I +           
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH-------- 228

Query: 310 HIYGLEGADSSGLDWKS-IERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAIS- 367
                          ++ + R    +  +N LLV     N +  K         +F +S 
Sbjct: 229 -------------SIQAELRRLLKSKPYENCLLVLL---NVQNAKA------WNAFNLSC 266

Query: 368 KSINSYTSR------FLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVL 421
           K +   T+R      FL    T  +S    S  L     E+     +      +D    L
Sbjct: 267 KIL--LTTRFKQVTDFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCRPQD----L 318

Query: 422 PVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHV----FTHTRE- 476
           P    ++ + +   L            +IA   R+     D     +HV     T   E 
Sbjct: 319 PR---EVLTTNPRRLS-----------IIAESIRDGLATWDNW---KHVNCDKLTTIIES 361

Query: 477 -LERPLVGSILQSMW--------GVS-PTHLL---WSSMHNNTLVDYTWSIGQTPFGPFS 523
            L   L  +  + M+            PT LL   W  +           I        +
Sbjct: 362 SLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV-----------IKSDVMVVVN 409

Query: 524 EISSLSFVQKDAARRNVLLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNL 583
           ++   S V+K      + + S+   +   ++     A H   R ++            +L
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLE--NEYALH---RSIVDHYNIPKTFDSDDL 464

Query: 584 FKYKLDKAVTALSHMDFEMALYYLRSSDHDLYTMHSLVHHATQ-ELEASLVCFKDPPVPW 642
               LD+                        Y    + HH    E    +  F+      
Sbjct: 465 IPPYLDQ------------------------YFYSHIGHHLKNIEHPERMTLFRM----- 495

Query: 643 ASISMSAVVFLALSYVYTK 661
                   VFL   ++  K
Sbjct: 496 --------VFLDFRFLEQK 506

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-04
 Identities = 52/345 (15%), Positives = 92/345 (26%), Gaps = 99/345 (28%)

Query: 72  SLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSATTSSHSLAIS-- 129
            LS   + HI L   + +  P    SLL  YL             P    +++   +S  
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD------LPREVLTTNPRRLSII 333

Query: 130 ---------HSPHFDISVSPSLASHLSQTLDSLLASTPSSLRS--PLLSIPYSSIDEIVK 178
                       ++       L + +  +L+ L    P+  R     LS+          
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVL---EPAEYRKMFDRLSV---------- 380

Query: 179 QDFEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGA 238
             F    H+                      P       T  L  IW    +   + +  
Sbjct: 381 --FPPSAHI----------------------P-------TILLSLIWFDVIKSDVMVVVN 409

Query: 239 GPVDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADL-ASLVWSAYQVLVV--PSLR 295
               Y   +      PK     + + +   K +      L  S+V   Y +         
Sbjct: 410 KLHKYS-LVEKQ---PKESTISIPSIYLELKVKLENEYALHRSIV-DHYNIPKTFDSDDL 464

Query: 296 IPVYFENSLIVQFI--HIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYK 353
           IP Y +       I  H+  +E  +            F+D               F   K
Sbjct: 465 IPPYLDQ-YFYSHIGHHLKNIEHPE----RMTLFRMVFLD-------------FRFLEQK 506

Query: 354 VNFADCSVCSFAISKS----INSYTSRFLFDN---YTMIVSEYLD 391
           +     +  +     +    +  Y   ++ DN   Y  +V+  LD
Sbjct: 507 IRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILD 550

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00