Citrus Sinensis ID: 006152

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
cccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHccccEEEEHHHHHHHHHccccEEEEcccHHcccccHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHcccccEEEcc
ccccccccccEcccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccEEHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHcccEcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHcEEEEcHHHHHHccHHHHHHHHHHHHHHHHHccccEEEEEEccEEccccccccccccccccHHHHEccccccccccccccccccccEEEccccccccHHHHHEEEHcccccccccccEEEEEEHHEEEEEEEEcc
mdsrrssralidpkvrqvgfftnaplppdrtqsdppdpihstpladasspgnflspvmippprhpsssllprlphspsdafpppsptttttttslgdfsddvtaassppSAAAAAARVrgrgssvkqqgaassfpgggfevppsvkapssvpasglttvsvvklppgisenaggsvsVEVQsdralnskplkekTSKAERRAIQEAQRAAKAAAKAEgiktpaatalanakptkstrpspqrndspvVVAAsekkggdrsvekdrkkdvphprmqyddksrVQKLkkrsvvkptearNRVELFrhlpqyehgtqlpvlqskffqldtlhpaVYKVGLQylsgdicggNARCIAMLQAFQEAIRdystppaktlsrDLTAKISSYVSFlidcrplsvsMGNAIRFLKSQIAkipislsesEAKATLHSDIERFINEKIILADRVIVKHAVTkirdgdvlltyGSSSAVEMILQHAHELGKQFRVVIvdsrpkheGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASsvlsngtvcsRVGTACVAMVAYGFHIPVLVCCeaykfhervqldsicsnelgdpdsiskvpgredinhldgwdksenLQLLNLiydatpsdyVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
mdsrrssralidpkvrqvgFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLppgisenaggsvsvevqsdralnskplkektskaERRAIQEAQRAAKAAakaegiktpaatalanakptkstrpspqrndspvvvaasekkggdrsvekdrkkdvphprmqyddksrvqklkkrsvvkptearnrVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINekiiladrvIVKHAvtkirdgdvLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIppprhpsssllprlphspsDAFpppsptttttttsLGDFSDDVTaassppsaaaaaarvrgrgssvKQQGAASSFPGGGFEvppsvkapssvpasGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSkaerraiqeaqraakaaakaeGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEgklllrrlvrkglSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
***********************************************************************************************************************************************************************************************************************************************************************************************************VELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNEL*************DINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVI*
***********DPKVRQVGFF***************************************************************************************************************************************************************************************************************************************************************************************ELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
********ALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPS*************TTSLGDFSDDVT*******************************PGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPL***************************IKTPAATA********************************************HPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
********ALIDPKVRQVGFFTNA*******************************PVMIPP**HPSSSLLPRLPHSPSD****************************************************************************LTTVSVVKLP***************************************************************************************************************DDKSRVQKLKKRSVVKPT*ARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVRSACCLYFHYIIIIVIP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query658 2.2.26 [Sep-21-2011]
P41111523 Translation initiation fa yes no 0.610 0.768 0.443 2e-96
Q61749524 Translation initiation fa yes no 0.648 0.814 0.424 1e-95
Q3T058524 Translation initiation fa yes no 0.612 0.769 0.449 2e-95
Q63186524 Translation initiation fa yes no 0.612 0.769 0.437 5e-95
Q9UI10523 Translation initiation fa yes no 0.609 0.766 0.445 3e-94
Q54FM3619 Translation initiation fa yes no 0.562 0.597 0.444 2e-87
Q09924467 Probable translation init yes no 0.472 0.665 0.455 3e-80
P12754651 Translation initiation fa yes no 0.430 0.434 0.421 4e-59
Q8U4G6324 Putative translation init yes no 0.405 0.824 0.296 7e-29
Q9V281324 Putative translation init yes no 0.436 0.885 0.273 6e-28
>sp|P41111|EI2BD_RABIT Translation initiation factor eIF-2B subunit delta OS=Oryctolagus cuniculus GN=EIF2B4 PE=2 SV=2 Back     alignment and function desciption
 Score =  353 bits (907), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 197/444 (44%), Positives = 268/444 (60%), Gaps = 42/444 (9%)

Query: 197 KAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKG 256
           +AERRA QEA+RA K A K E                    P PQ + S    A     G
Sbjct: 100 RAERRAKQEAERALKQARKGE-----------------QGGPPPQASPS---TAGEAPAG 139

Query: 257 GDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEAR----NRVELFRHLPQYEHG 312
           G R  E            Q DD + +++L ++S  +    R    ++V LF HLPQY   
Sbjct: 140 GKRLTE----------HTQADDPTLLRRLVRKSERQQVPTRKDYGSKVSLFSHLPQYSRQ 189

Query: 313 TQLPVLQSKFFQL--DTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA 370
             L    +++  +    +HPA+ ++GLQY  G I G NARCIA+L+A Q+ I+DY+TPP 
Sbjct: 190 NSL----TQYMSIPSSVIHPAMVRLGLQYSQGLISGSNARCIALLRALQQVIQDYTTPPN 245

Query: 371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIE 430
           + LSRDL  K+  Y+ FL  CRPLS SM NAI+FL  +I  +  +  E EAKA L +  +
Sbjct: 246 EELSRDLVNKLKPYICFLTQCRPLSASMYNAIKFLNKEITGVSSTKREEEAKAELQAAAD 305

Query: 431 RFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRP 490
           R++ EKI+LA + I++ A  KI +GDV+L YG SS V  ILQ A   G++FRVV+VDSRP
Sbjct: 306 RYVQEKIVLAAQAILRFASKKISNGDVILVYGCSSLVSRILQEAWSEGRKFRVVVVDSRP 365

Query: 491 KHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM 550
           + EG+ +LR LVR G+  +Y  I A SY++ EV++V LGA ++L+NG+V SRVGTA +A+
Sbjct: 366 RLEGRHMLRFLVRAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLAL 425

Query: 551 VAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQ 610
           VA   ++PVLVCCE YKF ERVQ D+  SNEL DPD +    G  D   L  W    +L+
Sbjct: 426 VARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCERG--DHVALANWQSHPSLR 483

Query: 611 LLNLIYDATPSDYVSLIITDYGMV 634
           LLNL+YD TP + V L+IT+ GM+
Sbjct: 484 LLNLVYDVTPPELVDLVITELGMI 507
Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.
Oryctolagus cuniculus (taxid: 9986)
>sp|Q61749|EI2BD_MOUSE Translation initiation factor eIF-2B subunit delta OS=Mus musculus GN=Eif2b4 PE=2 SV=2 Back     alignment and function description
>sp|Q3T058|EI2BD_BOVIN Translation initiation factor eIF-2B subunit delta OS=Bos taurus GN=EIF2B4 PE=2 SV=1 Back     alignment and function description
>sp|Q63186|EI2BD_RAT Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus GN=Eif2b4 PE=2 SV=1 Back     alignment and function description
>sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2 Back     alignment and function description
>sp|Q54FM3|EI2BD_DICDI Translation initiation factor eIF-2B subunit delta OS=Dictyostelium discoideum GN=eif2b4 PE=3 SV=1 Back     alignment and function description
>sp|Q09924|EI2BD_SCHPO Probable translation initiation factor eIF-2B subunit delta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif224 PE=1 SV=1 Back     alignment and function description
>sp|P12754|EI2BD_YEAST Translation initiation factor eIF-2B subunit delta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCD2 PE=1 SV=1 Back     alignment and function description
>sp|Q8U4G6|EI2B2_PYRFU Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2 Back     alignment and function description
>sp|Q9V281|EI2B2_PYRAB Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aIF-2BII PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
225451956650 PREDICTED: translation initiation factor 0.934 0.946 0.694 0.0
224127602634 predicted protein [Populus trichocarpa] 0.927 0.962 0.701 0.0
297801756641 eukaryotic translation initiation factor 0.940 0.965 0.674 0.0
15240967642 translation initiation factor eIF-2B del 0.943 0.967 0.678 0.0
255560374638 translation initiation factor 2b, delta 0.942 0.971 0.687 0.0
356551080659 PREDICTED: translation initiation factor 0.954 0.952 0.656 0.0
255541846664 translation initiation factor 2b, delta 0.942 0.933 0.636 0.0
356567176627 PREDICTED: translation initiation factor 0.930 0.976 0.690 0.0
356573663660 PREDICTED: translation initiation factor 0.952 0.95 0.658 0.0
359490928649 PREDICTED: translation initiation factor 0.930 0.942 0.620 0.0
>gi|225451956|ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/664 (69%), Positives = 528/664 (79%), Gaps = 49/664 (7%)

Query: 1   MDSRRSSRALIDPKVRQVGFFTNAP-LPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMI 59
           MD RR +R +IDPKVRQVGFF  AP   P RTQS PP+      +AD S  GN LSPVMI
Sbjct: 1   MDPRRGARVVIDPKVRQVGFF--APGASPGRTQSGPPESSSPP-VADNSPTGNSLSPVMI 57

Query: 60  PPPRHPSSSLLPRLP-----------------HSPSDAFPPPSPTTT-TTTTSLGDFSDD 101
           PPPRH S +LL   P                 ++PS+ F   SPT +  +    G+FS+D
Sbjct: 58  PPPRHASDNLLSARPALYPPLRRPGDTIPVGSYNPSEFFHGTSPTASFYSKVGDGEFSED 117

Query: 102 VTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSV 161
                      A+ A    RG+S K    ASSFPGGGF++       ++V  S LTTVSV
Sbjct: 118 -----------ASGAGWTHRGNSGK---VASSFPGGGFDL-------TAVKPSNLTTVSV 156

Query: 162 VKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKT 221
           V +PPGIS  +GG+ S+EVQ+++  +S+ LKEKTSKAERRA+QEAQRAAKAAAKAE  K 
Sbjct: 157 VNMPPGISVKSGGA-SIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKA 215

Query: 222 P-AATALA---NAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYD 277
           P AA+ +A   NAKP K ++ S Q+ DS   V ASEKKG DR  EKDRKKDVPHPRMQ+D
Sbjct: 216 PIAASGVATSVNAKPAKVSKLSSQKKDS-ASVTASEKKGVDRPPEKDRKKDVPHPRMQFD 274

Query: 278 DKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGL 337
           DKSRV+K K+R+VV+P E RNRVELFRHLPQYE GT LP L+SKFF LD +HPAVYKVGL
Sbjct: 275 DKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGL 334

Query: 338 QYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVS 397
           QYL+GD+ GGNARCIAMLQAFQEAI+DYSTPP KTL RDLTA++SSYVSFLI+CRPLS+S
Sbjct: 335 QYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSIS 394

Query: 398 MGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDV 457
           MGNAIRFLKS+IAK+P+SLSESEAKA+L SDI RFINEKI+LAD+VIV+HAVTKIRDGDV
Sbjct: 395 MGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDV 454

Query: 458 LLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS 517
           LLTYGSSSAVEMIL +AHELGKQFRVV+VDSRPK EG+LLLRRLV KGLSCTYTHINA+S
Sbjct: 455 LLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVS 514

Query: 518 YIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSI 577
           YI+HEVTRVFLGASSVLSNGTV SRVGTACV+MVA+ F +PVLVCCEAYKF+ERVQLDSI
Sbjct: 515 YIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSI 574

Query: 578 CSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHT 637
           CSNELGDPD+ISKVPGRE+IN+LD W KSENLQLLNLIYDATPSDYVS+IITDYGMV  T
Sbjct: 575 CSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPT 634

Query: 638 LVSV 641
            V V
Sbjct: 635 SVPV 638

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224127602|ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297801756|ref|XP_002868762.1| eukaryotic translation initiation factor 2B family protein [Arabidopsis lyrata subsp. lyrata] gi|297314598|gb|EFH45021.1| eukaryotic translation initiation factor 2B family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15240967|ref|NP_198680.1| translation initiation factor eIF-2B delta subunit [Arabidopsis thaliana] gi|10176832|dbj|BAB10154.1| unnamed protein product [Arabidopsis thaliana] gi|17064894|gb|AAL32601.1| Unknown protein [Arabidopsis thaliana] gi|31711742|gb|AAP68227.1| At5g38640 [Arabidopsis thaliana] gi|332006961|gb|AED94344.1| translation initiation factor eIF-2B delta subunit [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255560374|ref|XP_002521202.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] gi|223539567|gb|EEF41154.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356551080|ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|255541846|ref|XP_002511987.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] gi|223549167|gb|EEF50656.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356567176|ref|XP_003551797.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|356573663|ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|359490928|ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
TAIR|locus:2159868642 AT5G38640 "AT5G38640" [Arabido 0.762 0.781 0.679 2.4e-192
TAIR|locus:2028501666 AT1G48970 "AT1G48970" [Arabido 0.768 0.759 0.553 1.3e-154
UNIPROTKB|Q2QM52607 LOC_Os12g42260 "Initiation fac 0.721 0.782 0.616 1.7e-154
TAIR|locus:2051779333 AT2G44070 "AT2G44070" [Arabido 0.477 0.942 0.749 4.4e-123
ZFIN|ZDB-GENE-030131-955541 eif2b4 "eukaryotic translation 0.632 0.768 0.455 1.4e-89
UNIPROTKB|A8JGW6434 EIF2B "Eukaryotic initiation f 0.519 0.788 0.504 8e-89
UNIPROTKB|F1NDW0503 EIF2B4 "Uncharacterized protei 0.562 0.735 0.481 1.3e-86
UNIPROTKB|F1PAD0525 EIF2B4 "Uncharacterized protei 0.562 0.704 0.459 5.1e-83
UNIPROTKB|E2R8W5546 EIF2B4 "Uncharacterized protei 0.562 0.677 0.459 8.3e-83
UNIPROTKB|P41111523 EIF2B4 "Translation initiation 0.621 0.782 0.433 2e-81
TAIR|locus:2159868 AT5G38640 "AT5G38640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1728 (613.3 bits), Expect = 2.4e-192, Sum P(2) = 2.4e-192
 Identities = 350/515 (67%), Positives = 400/515 (77%)

Query:   131 ASSFPGGGFEXXXXXXXXXXXXXXGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKP 190
             ASS PG G +              GLTTVSVV +PPG+SE A G   +EVQSD+    KP
Sbjct:   125 ASSLPGIGMDSMAAAKSSSVPAS-GLTTVSVVTMPPGLSEKASG---MEVQSDQ---KKP 177

Query:   191 LKEKTSXXXXXXXXXXXXXXXXXXXXXGIKT-P---AATALANAKPTKSTRPSPQRNDSP 246
             LKEKT+                     G K  P   A+ A  + K  K  + + Q+ND  
Sbjct:   178 LKEKTTKAERRAIQEAQRAAKAAAKADGGKVAPVSSASVASTSVKAAKPAKATSQKNDVA 237

Query:   247 VVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHL 306
             V   A+EKKGG    EKDRKKD PHPRMQYDD+SRV K K+R+VVK TEA+NRVELFRHL
Sbjct:   238 VATGAAEKKGGPS--EKDRKKDAPHPRMQYDDESRVVKAKRRAVVKQTEAKNRVELFRHL 295

Query:   307 PQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYS 366
             PQYEHGTQLP L++KFFQLD +HPAVYKVGLQYLSGDI GGNARCIAMLQAFQE ++DYS
Sbjct:   296 PQYEHGTQLPDLETKFFQLDPMHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEVVKDYS 355

Query:   367 TPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLH 426
             TPP K+L+RD+TAKISSYVSFLI+CRPLS+SMGNAIRF+K++IAK+PI+LSESEAKATL 
Sbjct:   356 TPPEKSLNRDMTAKISSYVSFLIECRPLSISMGNAIRFVKNRIAKLPITLSESEAKATLQ 415

Query:   427 SDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIV 486
             SDIERFINEKII+AD VIVKHAVTKIRDGDVLLTYGS +AVEM++ HAHEL K+FRV++V
Sbjct:   416 SDIERFINEKIIVADTVIVKHAVTKIRDGDVLLTYGSPTAVEMVILHAHELRKKFRVLVV 475

Query:   487 DSRPKHEXXXXXXXXXXXXXSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTA 546
             DSRPK E             +CTYTHINAISYI+HEVT+VFLGASSVLSNGTV SRVGTA
Sbjct:   476 DSRPKLEGQLLLRRLIKRGINCTYTHINAISYIMHEVTKVFLGASSVLSNGTVYSRVGTA 535

Query:   547 CVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKS 606
             CVAMVA  F +PVLVCCEAYKFHERVQLDSICSNELGDP++IS+V GREDIN+LDG   +
Sbjct:   536 CVAMVANAFRVPVLVCCEAYKFHERVQLDSICSNELGDPNAISEVHGREDINYLDGLTNN 595

Query:   607 ENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSV 641
              NLQ LNL+YDATPSDY+S+IITDYGMV  T V V
Sbjct:   596 ANLQFLNLMYDATPSDYISMIITDYGMVPPTSVPV 630
GO:0003743 "translation initiation factor activity" evidence=ISS;IBA
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA
GO:0005525 "GTP binding" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA
GO:0006413 "translational initiation" evidence=ISS
GO:0044237 "cellular metabolic process" evidence=IEA
GO:0045947 "negative regulation of translational initiation" evidence=IBA
GO:0050790 "regulation of catalytic activity" evidence=IBA
TAIR|locus:2028501 AT1G48970 "AT1G48970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QM52 LOC_Os12g42260 "Initiation factor 2 subunit family protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2051779 AT2G44070 "AT2G44070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-955 eif2b4 "eukaryotic translation initiation factor 2B, subunit 4 delta" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A8JGW6 EIF2B "Eukaryotic initiation factor" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDW0 EIF2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAD0 EIF2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8W5 EIF2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P41111 EIF2B4 "Translation initiation factor eIF-2B subunit delta" [Oryctolagus cuniculus (taxid:9986)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_1230028
hypothetical protein (634 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.0022009302
hypothetical protein (343 aa)
    ••• 0.829
estExt_fgenesh4_pm.C_LG_VIII0284
hypothetical protein (343 aa)
    ••• 0.828
eugene3.00030772
hypothetical protein (464 aa)
    ••• 0.819
estExt_Genewise1_v1.C_290097
hypothetical protein (465 aa)
    ••• 0.818
estExt_fgenesh4_pm.C_LG_XIII0470
SubName- Full=Putative uncharacterized protein; (271 aa)
    ••  0.806
fgenesh4_pg.C_scaffold_1866000002
annotation not avaliable (150 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
pfam01008281 pfam01008, IF-2B, Initiation factor 2 subunit fami 9e-84
COG1184301 COG1184, GCD2, Translation initiation factor 2B su 7e-66
PRK08535310 PRK08535, PRK08535, translation initiation factor 3e-36
TIGR00511301 TIGR00511, ribulose_e2b2, ribose-1,5-bisphosphate 4e-33
TIGR00524303 TIGR00524, eIF-2B_rel, eIF-2B alpha/beta/delta-rel 3e-25
PRK08335275 PRK08335, PRK08335, translation initiation factor 4e-18
COG0182346 COG0182, COG0182, Predicted translation initiation 2e-12
PRK05772363 PRK05772, PRK05772, translation initiation factor 5e-11
TIGR00512331 TIGR00512, salvage_mtnA, S-methyl-5-thioribose-1-p 5e-11
PRK06372253 PRK06372, PRK06372, translation initiation factor 8e-11
PRK06371329 PRK06371, PRK06371, translation initiation factor 6e-09
PRK06036339 PRK06036, PRK06036, translation initiation factor 1e-08
PRK05720344 PRK05720, mtnA, methylthioribose-1-phosphate isome 7e-08
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 3e-06
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 1e-05
PRK07003830 PRK07003, PRK07003, DNA polymerase III subunits ga 3e-05
PRK12323700 PRK12323, PRK12323, DNA polymerase III subunits ga 0.001
PRK07003830 PRK07003, PRK07003, DNA polymerase III subunits ga 0.004
>gnl|CDD|216240 pfam01008, IF-2B, Initiation factor 2 subunit family Back     alignment and domain information 
 Score =  264 bits (677), Expect = 9e-84
 Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 13/289 (4%)

Query: 346 GGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFL 405
           G  A  IA L+     I+D  TP       +L  ++ S + FLI  RP +VS+GNAI  L
Sbjct: 4   GSPAIAIAALEGLLLVIQDARTPT----VAELKEQLRSAIEFLISARPTAVSLGNAIDRL 59

Query: 406 KSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSS 465
              I+++  S    EAK +L    + FI+E I  A R I   A   I+DGD +LT+ +S 
Sbjct: 60  LRIISELHSSSDVEEAKESLIEAADEFIDE-IEEARRKIGAIAAELIKDGDTILTHCNSG 118

Query: 466 AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTR 525
            V  +L+ AH+ GK+FRV++ +SRP+ +G+L  + LV+ G+  T    +A+ Y++ EV +
Sbjct: 119 TVLGVLRAAHKEGKRFRVIVTESRPRLQGRLTAKELVQAGIPVTLITDSAVGYVMQEVDK 178

Query: 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDP 585
           V +GA  +L+NG + +++GT  +A++A   ++P  V  E YKF  R  LD     E  DP
Sbjct: 179 VIVGADRILANGGIANKIGTYQLALLAKAHNVPFYVVAETYKFDPRFPLDEDIFIEERDP 238

Query: 586 DSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMV 634
           + +        I         ENL++ N  +D TP + ++LIIT+ G++
Sbjct: 239 EEV-LYRTGVRIA-------PENLKVRNPAFDYTPPELITLIITEVGVL 279

This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes, initiation factor 2B subunits 1 and 2 from archaebacteria and some proteins of unknown function from prokaryotes. Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. Members of this family have also been characterized as 5-methylthioribose- 1-phosphate isomerases, an enzyme of the methionine salvage pathway. The crystal structure of Ypr118w, a non-essential, low-copy number gene product from Saccharomyces cerevisiae, reveals a dimeric protein with two domains and a putative active site cleft. Length = 281
>gnl|CDD|224105 COG1184, GCD2, Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|236282 PRK08535, PRK08535, translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>gnl|CDD|188057 TIGR00511, ribulose_e2b2, ribose-1,5-bisphosphate isomerase, e2b2 family Back     alignment and domain information
>gnl|CDD|233008 TIGR00524, eIF-2B_rel, eIF-2B alpha/beta/delta-related uncharacterized proteins Back     alignment and domain information
>gnl|CDD|169387 PRK08335, PRK08335, translation initiation factor IF-2B subunit alpha; Validated Back     alignment and domain information
>gnl|CDD|223260 COG0182, COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|168237 PRK05772, PRK05772, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|233003 TIGR00512, salvage_mtnA, S-methyl-5-thioribose-1-phosphate isomerase Back     alignment and domain information
>gnl|CDD|235788 PRK06372, PRK06372, translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>gnl|CDD|180547 PRK06371, PRK06371, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|180362 PRK06036, PRK06036, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|235578 PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 658
KOG1467556 consensus Translation initiation factor 2B, delta 100.0
TIGR00512331 salvage_mtnA S-methyl-5-thioribose-1-phosphate iso 100.0
PRK05720344 mtnA methylthioribose-1-phosphate isomerase; Revie 100.0
PRK08535310 translation initiation factor IF-2B subunit delta; 100.0
COG0182346 Predicted translation initiation factor 2B subunit 100.0
PRK06036339 translation initiation factor IF-2B subunit alpha; 100.0
PRK05772363 translation initiation factor IF-2B subunit alpha; 100.0
TIGR00511301 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e 100.0
PRK08334356 translation initiation factor IF-2B subunit beta; 100.0
PRK06371329 translation initiation factor IF-2B subunit alpha; 100.0
TIGR00524303 eIF-2B_rel eIF-2B alpha/beta/delta-related unchara 100.0
COG1184301 GCD2 Translation initiation factor 2B subunit, eIF 100.0
PF01008282 IF-2B: Initiation factor 2 subunit family; InterPr 100.0
PRK08335275 translation initiation factor IF-2B subunit alpha; 100.0
KOG1468354 consensus Predicted translation initiation factor 100.0
KOG1466313 consensus Translation initiation factor 2B, alpha 100.0
KOG1465353 consensus Translation initiation factor 2B, beta s 100.0
PRK06372253 translation initiation factor IF-2B subunit delta; 100.0
PRK00702220 ribose-5-phosphate isomerase A; Provisional 97.53
TIGR00021218 rpiA ribose 5-phosphate isomerase. This model desc 97.35
PRK13509251 transcriptional repressor UlaR; Provisional 97.24
PRK10434256 srlR DNA-bindng transcriptional repressor SrlR; Pr 97.24
PF00455161 DeoRC: DeoR C terminal sensor domain; InterPro: IP 97.17
cd01398213 RPI_A RPI_A: Ribose 5-phosphate isomerase type A ( 97.13
PRK09802269 DNA-binding transcriptional regulator AgaR; Provis 97.08
PRK10906252 DNA-binding transcriptional repressor GlpR; Provis 97.03
COG1349253 GlpR Transcriptional regulators of sugar metabolis 96.61
PRK10411240 DNA-binding transcriptional activator FucR; Provis 96.48
PRK10681252 DNA-binding transcriptional repressor DeoR; Provis 96.11
PLN02384264 ribose-5-phosphate isomerase 95.08
PRK13978228 ribose-5-phosphate isomerase A; Provisional 94.04
KOG0259 447 consensus Tyrosine aminotransferase [Amino acid tr 90.68
COG2057225 AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, 89.24
COG0120227 RpiA Ribose 5-phosphate isomerase [Carbohydrate tr 88.76
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 85.92
COG0426388 FpaA Uncharacterized flavoproteins [Energy product 82.71
PRK04311 464 selenocysteine synthase; Provisional 80.8
TIGR01437363 selA_rel uncharacterized pyridoxal phosphate-depen 80.64
PF01073280 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso 80.52
cd00293130 USP_Like Usp: Universal stress protein family. The 80.31
TIGR00474 454 selA seryl-tRNA(sec) selenium transferase. In bact 80.09
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=8.8e-108  Score=873.39  Aligned_cols=528  Identities=51%  Similarity=0.794  Sum_probs=434.4

Q ss_pred             CCCCCCCcccccCCCC-CCCCCCCCCCC---CCCCCCCCCCCCCCccccccCCCCCCccccCCCCCcchhhhhhhccCCC
Q 006152           48 SSPGNFLSPVMIPPPR-HPSSSLLPRLP---HSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGS  123 (658)
Q Consensus        48 ~~~~~~~~~v~~p~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (658)
                      ++.+|+++|+|||++| |.+|.+...+-   ..+.....+..+ .       +.+.  ++...++..+. .         
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~kk~~k~~~~ep~~~-~-------~~~~--~p~~~t~s~~~-~---------   74 (556)
T KOG1467|consen   15 DKLKELPEPANNPVARLGTIDQVKSERNAKKVAKQAAKEPAQG-E-------DKNA--EPKDLTASAKQ-A---------   74 (556)
T ss_pred             chhhhccccccCccccccchHHHHHHHHHhhcCccccccccCC-C-------cccc--Ccccccccccc-c---------
Confidence            4899999999999999 88888876441   001111111110 0       1111  11111111111 1         


Q ss_pred             cccccccccCCCCCCCCCCCCcCCCCCCCCCCCeeeeeecCCCCCcCCCCCCcceeeccccccCCCcchhhccHHHHHHH
Q 006152          124 SVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAI  203 (658)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kaerra~  203 (658)
                         ...+..++|.||+|+|...+++   .+                    .++..+.+....+..+..+.+.|+||||+.
T Consensus        75 ---~~~~~~s~~~~~~e~t~a~~a~---~~--------------------a~~s~~~~p~~~~~~ka~~~~~t~a~~~a~  128 (556)
T KOG1467|consen   75 ---RVAVKASLPKGGAELTVANKAA---AA--------------------AGSSATQSPKKEKPPKAGLAVPTRAERKAI  128 (556)
T ss_pred             ---ccchhhcccCCcceecccccch---hh--------------------hccccccCCcccCCcccccccccHHHHhhH
Confidence               1456789999999999773222   11                    111223333444556778889999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCcchhhcccCCCCCCCCCCC-CCCCCCccccccccCCCCCcccccccCCCCCCCcccCcHHHH
Q 006152          204 QEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSP-QRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRV  282 (658)
Q Consensus       204 qe~qraakaa~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~dd~~~~  282 (658)
                      ||++||+|+|+|++++..........+.+..+...|. .|+..+      ...+..-+.   ++.++++|.+|+++..+.
T Consensus       129 ~Ea~~a~K~a~kg~~~~~a~~~~~~kA~~s~a~~~P~~~k~~~p------~~t~~~~~~---~~~~~~~pq~q~kt~~~~  199 (556)
T KOG1467|consen  129 QEAKRAAKTAEKGEGARKAQVIERAKANASTAPAIPAVKKNALP------VTTSVDQAL---KRRAVQNPQNQAKTLASA  199 (556)
T ss_pred             HHHHHHHHHhhhcccccccccccccccCcccccCCCcccccccc------ccccccchH---Hhhcccchhhhhhhhccc
Confidence            9999999999999976421111111111111111122 222211      111111111   577889999999888766


Q ss_pred             HHhhhccccccccccCcccccccCCCceecccCcchhhhhhcccchhHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 006152          283 QKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAI  362 (658)
Q Consensus       283 ~k~~~~~~~~~~~~~~~v~lf~hLP~~~~~~~~~~~e~~~~ai~~mhPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI  362 (658)
                      . +.|+.|+.+     ++.||+||||+.+..      ..|..+..|||||++||+||+.|+|+|+|+|||+||.+|+++|
T Consensus       200 ~-~~rk~V~~~-----~v~lf~hL~q~~~~t------t~f~~~~~IHPAv~~Lglq~a~~kI~GsnaRCIa~L~afqevi  267 (556)
T KOG1467|consen  200 S-ASRKAVASQ-----KVSLFTHLPQYDRAT------TQFIFLDSIHPAVLRLGLQYALGKISGSNARCIAMLQAFQEVI  267 (556)
T ss_pred             C-ccccccccc-----eehhhhhhhHhhccc------ccccccccccHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHH
Confidence            5 777777755     899999999999864      2355666799999999999999999999999999999999999


Q ss_pred             HhcCCCCCcchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152          363 RDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADR  442 (658)
Q Consensus       363 ~dy~~p~~~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~  442 (658)
                      +||++|++++|+|+|+.+|+.+++||.+|||++++|||||||||+.|+.++.+..+.|+|+.|+++|++||+|+|..|++
T Consensus       268 ~Dy~TP~~ktlsrdLt~~i~~qv~~L~~cRPLs~SmgNAiRflK~eI~~L~~s~~e~eaKe~L~~~I~~~i~eki~~A~q  347 (556)
T KOG1467|consen  268 KDYTTPPEKTLSRDLTAAISPQVSFLTQCRPLSISMGNAIRFLKNEISKLPISLSESEAKEELQSDIDRFIAEKIILADQ  347 (556)
T ss_pred             HhccCCCccccchhhHhhhhhHHHHHhhcCCccchhhHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCcEEEEcchHHHHHhhh
Q 006152          443 VIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHE  522 (658)
Q Consensus       443 ~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vT~I~DsAv~~~M~~  522 (658)
                      .|++++.++|+|||+|||||+|++|+.+|++||+.|++|+|+|+||||.+||++|++.|.+.||+|||+++++++|+|.+
T Consensus       348 aI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syim~e  427 (556)
T KOG1467|consen  348 AISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYIMLE  427 (556)
T ss_pred             HHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCcccccccCCccccccCCC
Q 006152          523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDG  602 (658)
Q Consensus       523 Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~~g~~~~~~l~~  602 (658)
                      |++|||||++|++||.|++|+||+++||+|++|||||+||||+|||++|+++|++++||++||+++..++|+.+.+.|.+
T Consensus       428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yKF~eRvQlDsi~~NEL~dpn~l~~v~g~~~~~~L~~  507 (556)
T KOG1467|consen  428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYKFHERVQLDSIVSNELGDPNALQEVRGREDKVALAG  507 (556)
T ss_pred             cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhhhhhhhhhhhhhhcccCChhhhhhccCcchhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999777788999


Q ss_pred             ccCCCCceeccceeeecCCCCccEEEeCCCCcCCCcchHH
Q 006152          603 WDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSVR  642 (658)
Q Consensus       603 ~~~~~~l~v~Np~FDvTPpeLIT~IITE~Gii~PssVpv~  642 (658)
                      |....++.++|++||+||||||++||||+|+++|++||++
T Consensus       508 wqn~~~L~~lnl~YD~TPpelIs~vVTe~g~lp~TSVPvi  547 (556)
T KOG1467|consen  508 WQNNANLKFLNLMYDVTPPELISAVVTELGMLPPTSVPVI  547 (556)
T ss_pred             cccccccchhheeeccCcHHHHHHHHhhccccCCccchHH
Confidence            9999999999999999999999999999999999999987

>TIGR00512 salvage_mtnA S-methyl-5-thioribose-1-phosphate isomerase Back     alignment and domain information
>PRK05720 mtnA methylthioribose-1-phosphate isomerase; Reviewed Back     alignment and domain information
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06036 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family Back     alignment and domain information
>PRK08334 translation initiation factor IF-2B subunit beta; Validated Back     alignment and domain information
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins Back     alignment and domain information
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit Back     alignment and domain information
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated Back     alignment and domain information
>KOG1468 consensus Predicted translation initiation factor related to eIF-2B alpha/beta/delta subunits (CIG2/IDI2) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1466 consensus Translation initiation factor 2B, alpha subunit (eIF-2Balpha/GCN3) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>PRK00702 ribose-5-phosphate isomerase A; Provisional Back     alignment and domain information
>TIGR00021 rpiA ribose 5-phosphate isomerase Back     alignment and domain information
>PRK13509 transcriptional repressor UlaR; Provisional Back     alignment and domain information
>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional Back     alignment and domain information
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism Back     alignment and domain information
>cd01398 RPI_A RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway Back     alignment and domain information
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional Back     alignment and domain information
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional Back     alignment and domain information
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10411 DNA-binding transcriptional activator FucR; Provisional Back     alignment and domain information
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional Back     alignment and domain information
>PLN02384 ribose-5-phosphate isomerase Back     alignment and domain information
>PRK13978 ribose-5-phosphate isomerase A; Provisional Back     alignment and domain information
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>COG2057 AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism] Back     alignment and domain information
>COG0120 RpiA Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PRK04311 selenocysteine synthase; Provisional Back     alignment and domain information
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme Back     alignment and domain information
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>TIGR00474 selA seryl-tRNA(sec) selenium transferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
3vm6_A338 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 5e-25
3a11_A338 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 1e-24
3a9c_E322 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 2e-23
3a9c_F323 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 2e-23
3a9c_A321 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 2e-23
3a9c_B326 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 3e-22
1vb5_A276 Crystal Structure Analysis Of The Pyrococcus Horiko 2e-12
1t5o_A351 Crystal Structure Of The Translation Initiation Fac 9e-09
3ecs_A315 Crystal Structure Of Human Eif2b Alpha Length = 315 2e-08
2yrf_A374 Crystal Structure Of 5-Methylthioribose 1-Phosphate 2e-07
1t9k_A347 X-ray Crystal Structure Of Aif-2b Alpha Subunit-rel 6e-06
>pdb|3VM6|A Chain A, Crystal Structure Of Ribose-1,5-Bisphosphate Isomerase From Thermococcus Kodakarensis Kod1 In Complex With Alpha-D-Ribose-1,5- Bisphosphate Length = 338 Back     alignment and structure 
Iteration: 1

 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 376 DLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSE--SEAKATLHSDIERFI 433
           +   ++      L + RP +VS+ NA+R++  +  KI  S      + +  + +  + FI
Sbjct: 63  EFWKEMKQAAKILFETRPTAVSLPNALRYVMHR-GKIAYSSGADLEQLRFVIINAAKEFI 121
Query: 434 NEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHE 493
           +      +R I +    +I DGDV++T+  S A   +++ A E GK  +V++ ++RPK +
Sbjct: 122 HNSEKALER-IGEFGAKRIEDGDVIMTHSHSKAAISVMKTAWEQGKDIKVIVTETRPKWQ 180
Query: 494 XXXXXXXXXXXXXSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAY 553
                           Y   +A  + +    +V +GA S+  NG V +++GTA +A+ A 
Sbjct: 181 GKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAK 240
Query: 554 GFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLN 613
              +  ++  E YKFH    L  +   E+ DP  +  +P  E    L  W K  N+++ N
Sbjct: 241 EHRVWTMIAAETYKFHPETMLGQLVEIEMRDPTEV--IPEDE----LKTWPK--NIEVWN 292
Query: 614 LIYDATPSDYVSLIITDYGMV 634
             +D TP +YV +IIT+ G++
Sbjct: 293 PAFDVTPPEYVDVIITERGII 313
>pdb|3A11|A Chain A, Crystal Structure Of Ribose-1,5-Bisphosphate Isomerase From Thermococcus Kodakaraensis Kod1 Length = 338 Back     alignment and structure
>pdb|1VB5|A Chain A, Crystal Structure Analysis Of The Pyrococcus Horikoshii Ot3 Translation Initiation Factor Eif-2b Length = 276 Back     alignment and structure
>pdb|1T5O|A Chain A, Crystal Structure Of The Translation Initiation Factor Eif-2b, Subunit Delta, From A. Fulgidus Length = 351 Back     alignment and structure
>pdb|3ECS|A Chain A, Crystal Structure Of Human Eif2b Alpha Length = 315 Back     alignment and structure
>pdb|2YRF|A Chain A, Crystal Structure Of 5-Methylthioribose 1-Phosphate Isomerase From Bacillus Subtilis Complexed With Sulfate Ion Length = 374 Back     alignment and structure
>pdb|1T9K|A Chain A, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related Translation Initiation Factor [thermotoga Maritima] Length = 347 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
3ecs_A315 Translation initiation factor EIF-2B subunit alpha 7e-82
1vb5_A276 Translation initiation factor EIF-2B; 2.20A {Pyroc 1e-32
3a11_A338 Translation initiation factor EIF-2B, delta subun; 3e-29
2yvk_A374 Methylthioribose-1-phosphate isomerase; methionine 1e-16
1t9k_A347 Probable methylthioribose-1-phosphate isomerase; s 2e-16
1t5o_A351 EIF2BD, translation initiation factor EIF2B, subun 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
2a0u_A383 Initiation factor 2B; SGPP, structural genomics, P 6e-12
1w2w_B191 5-methylthioribose-1-phosphate isomerase; EIF2B, m 3e-04
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens} Length = 315 Back     alignment and structure
 Score =  260 bits (666), Expect = 7e-82
 Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 15/293 (5%)

Query: 349 ARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQ 408
           A  +A ++   E ++       + L  +LT+ I +          ++VS G  +      
Sbjct: 21  ASAVAAIRTLLEFLKRDKGETIQGLRANLTSAIETLCGV---DSSVAVSSGGELFLRFIS 77

Query: 409 IAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVE 468
           +A +  S   S+ K  +    E F+  +I L+   I     T I+DG  +LT+  S  V 
Sbjct: 78  LASLEYS-DYSKCKKIMIERGELFL-RRISLSRNKIADLCHTFIKDGATILTHAYSRVVL 135

Query: 469 MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528
            +L+ A    K+F V + +S+P   GK + + L    +  T     A+ YI+ +   V +
Sbjct: 136 RVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIV 195

Query: 529 GASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSI 588
           GA  V+ NG + +++GT  +A+ A   + P  V  E++KF     L     N+   PD  
Sbjct: 196 GAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPL-----NQQDVPDKF 250

Query: 589 SKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMVSHTLVSV 641
                +   + L      ++L+  +   D T    ++L+ TD G+++ + VS 
Sbjct: 251 -----KYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSD 298
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5 Length = 276 Back     alignment and structure
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A* Length = 338 Back     alignment and structure
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A* Length = 374 Back     alignment and structure
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5 Length = 347 Back     alignment and structure
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5 Length = 351 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5 Length = 383 Back     alignment and structure
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Length = 191 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
2a0u_A383 Initiation factor 2B; SGPP, structural genomics, P 100.0
2yvk_A374 Methylthioribose-1-phosphate isomerase; methionine 100.0
3a11_A338 Translation initiation factor EIF-2B, delta subun; 100.0
1t9k_A347 Probable methylthioribose-1-phosphate isomerase; s 100.0
1t5o_A351 EIF2BD, translation initiation factor EIF2B, subun 100.0
3ecs_A315 Translation initiation factor EIF-2B subunit alpha 100.0
1vb5_A276 Translation initiation factor EIF-2B; 2.20A {Pyroc 100.0
1w2w_B191 5-methylthioribose-1-phosphate isomerase; EIF2B, m 100.0
1w2w_A211 5-methylthioribose-1-phosphate isomerase; EIF2B, m 99.89
1uj6_A227 Ribose 5-phosphate isomerase; enzyme-inhibitor com 98.08
2f8m_A244 Ribose 5-phosphate isomerase; structural genomics, 97.86
1lk5_A229 D-ribose-5-phosphate isomerase; alpha/beta structu 97.76
1m0s_A219 Ribose-5-phosphate isomerase A; D-ribose 5-phospha 97.72
3kwm_A224 Ribose-5-phosphate isomerase A; structural genomic 97.44
3hhe_A255 Ribose-5-phosphate isomerase A; niaid, ssgcid, dec 97.4
1xtz_A264 Ribose-5-phosphate isomerase; yeast; 2.10A {Saccha 97.4
1o8b_A219 Ribose 5-phosphate isomerase; RPIA, PSI, protein S 97.28
3l7o_A225 Ribose-5-phosphate isomerase A; RPIA; 1.70A {Strep 97.15
2pjm_A226 Ribose-5-phosphate isomerase A; 3D-structure, stru 97.11
3uw1_A239 Ribose-5-phosphate isomerase A; ssgcid, seattle st 96.24
4gmk_A228 Ribose-5-phosphate isomerase A; D-ribose-5-phospha 91.42
3ixq_A226 Ribose-5-phosphate isomerase A; structural genomic 88.07
2hj0_A519 Putative citrate lyase, ALFA subunit; alpha beta p 80.03
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5 Back     alignment and structure
Probab=100.00  E-value=1.6e-71  Score=597.16  Aligned_cols=316  Identities=20%  Similarity=0.290  Sum_probs=286.5

Q ss_pred             cCccccc--ccCCCceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHhcCCCCC
Q 006152          297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA  370 (658)
Q Consensus       297 ~~~v~lf--~hLP~~~~~~~~~~~e~~~~ai~~m----hPAI~~LG~q~~~~~I~Gs~araiaml~A~k~vI~dy~~p~~  370 (658)
                      .+.|.||  +.||+++.|+.|.++++++.+|+.|    +|+|   |           .++|++|+++++++.....|.  
T Consensus        25 ~~~l~ildq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGApaI---g-----------iaaa~~l~l~~~~~~~~~~~~--   88 (383)
T 2a0u_A           25 PGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAI---A-----------VSAALGIAVATQRKAANGELK--   88 (383)
T ss_dssp             TTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHH---H-----------HHHHHHHHHHHHHHHHHSSCC--
T ss_pred             CCEEEEEecCCCCCceEEEEcCCHHHHHHHHHhCCCCCcHHH---H-----------HHHHHHHHHHHHhhcccccCC--
Confidence            3479999  9999999999999999999999999    6999   4           488999999999987653331  


Q ss_pred             cchHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006152          371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVT  450 (658)
Q Consensus       371 ~~~~r~L~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~  450 (658)
                        ...+|.+.|+..+++|.++|||++||+|++++|++.+.....+.+.+++|+.+++.+++|++|.+ .+++.|+++|++
T Consensus        89 --~~~~l~~~l~~~~~~L~~aRPtavnL~na~~r~~~~i~~~~~~~~~~~~k~~l~~~a~~i~~e~~-~~~~~I~~~g~~  165 (383)
T 2a0u_A           89 --SGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDV-AFNEGIMRHGAA  165 (383)
T ss_dssp             --CHHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence              35789999999999999999999999999999999987643334678999999999999999965 699999999999


Q ss_pred             hcc--------CCCEEEeeCCh--------HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHH-HHHHHHhCCCcEEEEcc
Q 006152          451 KIR--------DGDVLLTYGSS--------SAVEMILQHAHELGKQFRVVIVDSRPKHEGKL-LLRRLVRKGLSCTYTHI  513 (658)
Q Consensus       451 ~I~--------dgdvILT~g~S--------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~-La~eL~~~GI~vT~I~D  513 (658)
                      +|.        +|++|||||||        .++.++|+.|+++|++|+|||+||||++||.+ ++|+|.+.||+||||+|
T Consensus       166 ~I~~~~~~~~~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~D  245 (383)
T 2a0u_A          166 HILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICD  245 (383)
T ss_dssp             HHHHHHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECG
T ss_pred             HhhhhccccCCCCCEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCccchHHHHHHHHHHcCCCEEEEeh
Confidence            999        99999999987        46669999999999999999999999999986 56999999999999999


Q ss_pred             hHHHHHhhh--ccEEEEcceeEecCCCeecccchHHHHHHHhhCCCCeEeecccccccccccCCcccccccCCccccccc
Q 006152          514 NAISYIIHE--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGDPDSISKV  591 (658)
Q Consensus       514 sAv~~~M~~--Vd~VlvGAdaV~aNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~~ds~~~nElrdp~Ev~~~  591 (658)
                      ||++|+|++  ||+||||||+|++||+++||+|||++|++||+||||||||||+|||++.++.|..+++|+|+|+|++.+
T Consensus       246 sa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g~~i~iEer~~~Ev~~~  325 (383)
T 2a0u_A          246 GAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTN  325 (383)
T ss_dssp             GGHHHHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBC
T ss_pred             hHHHHHhhcCCCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEeCCcceecCcCCCccccccccCCHHHhccc
Confidence            999999998  999999999999999999999999999999999999999999999999999998899999999999987


Q ss_pred             C--CccccccCCCccCCCC--ceeccceeeecCCCCcc-EEEeCCCCcCCCcc
Q 006152          592 P--GREDINHLDGWDKSEN--LQLLNLIYDATPSDYVS-LIITDYGMVSHTLV  639 (658)
Q Consensus       592 ~--g~~~~~~l~~~~~~~~--l~v~Np~FDvTPpeLIT-~IITE~Gii~PssV  639 (658)
                      +  |..        ..+++  ++++||+|||||++||| +||||.|+++|+.+
T Consensus       326 ~~~g~~--------~a~~~~~v~v~NPaFDvTP~~lIt~~iITE~Gv~~p~~~  370 (383)
T 2a0u_A          326 LVTKQR--------VVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAAS  370 (383)
T ss_dssp             TTTCCB--------CSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSS
T ss_pred             ccCCce--------ecCCCCceeeecccccccChHHCCcEEEccCCccCCccc
Confidence            3  432        24566  99999999999999999 99999999988765
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A* Back     alignment and structure
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A* Back     alignment and structure
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5 Back     alignment and structure
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5 Back     alignment and structure
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens} Back     alignment and structure
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5 Back     alignment and structure
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Back     alignment and structure
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Back     alignment and structure
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A* Back     alignment and structure
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum} Back     alignment and structure
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A* Back     alignment and structure
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1 Back     alignment and structure
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp} Back     alignment and structure
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae} Back     alignment and structure
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A* Back     alignment and structure
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans} Back     alignment and structure
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A* Back     alignment and structure
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius} Back     alignment and structure
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii} Back     alignment and structure
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 658
d1vb5a_274 c.124.1.5 (A:) Putative eIF-2B subunit 2-like prot 7e-47
d2a0ua1374 c.124.1.5 (A:10-383) Initiation factor 2b {Leishma 9e-45
g1w2w.1402 c.124.1.5 (A:,B:) Putative methylthioribose-1-phos 9e-40
d1t9ka_340 c.124.1.5 (A:) Probable methylthioribose-1-phospha 3e-33
d1t5oa_340 c.124.1.5 (A:) Putative eIF-2B delta-subunit {Arch 7e-32
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]} Length = 274 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: IF2B-like
domain: Putative eIF-2B subunit 2-like protein PH0440
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  164 bits (417), Expect = 7e-47
 Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 32/248 (12%)

Query: 388 LIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKH 447
           ++   P   S+ N  RF+             +  +  L S    F+   +  A R +   
Sbjct: 54  VVKVNPSMASLYNLARFI-----------PVTNRRDILKSRALEFLRR-MEEAKRELASI 101

Query: 448 AVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLS 507
               I DGDV++T+  SS V  I++ A E  K+F+V++ +S P +EG  L R L   G+ 
Sbjct: 102 GAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIE 161

Query: 508 CTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567
                   +     E +   +GA  +  +G V ++ GT  +A+  +   IP  V  E YK
Sbjct: 162 FEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYK 221

Query: 568 FHERVQLDSICSNELGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLI 627
           FH  ++   +   E            R+ I          N+++ N+++D TP  YV  I
Sbjct: 222 FHPTLKSGDVMLME------------RDLIR--------GNVRIRNVLFDVTPWKYVRGI 261

Query: 628 ITDYGMVS 635
           IT+ G+V 
Sbjct: 262 ITELGIVI 269
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} Length = 374 Back     information, alignment and structure
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]} Length = 340 Back     information, alignment and structure
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
g1w2w.1402 Putative methylthioribose-1-phosphate isomerase Yp 100.0
d2a0ua1374 Initiation factor 2b {Leishmania major [TaxId: 566 100.0
d1t9ka_340 Probable methylthioribose-1-phosphate isomerase TM 100.0
d1t5oa_340 Putative eIF-2B delta-subunit {Archaeon Archaeoglo 100.0
d1vb5a_274 Putative eIF-2B subunit 2-like protein PH0440 {Pyr 100.0
d1m0sa1147 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.84
d1uj4a1151 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.68
d1lk5a1149 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.42
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1m0sa1 c.124.1.4 (A:1-126,A:199-219) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1uj4a1 c.124.1.4 (A:3-131,A:206-227) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lk5a1 c.124.1.4 (A:1-130,A:211-229) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure