Citrus Sinensis ID: 006285

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650--

MMMDDDMENGGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLCGR

cccccHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHccccccccccHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc

cccccHHccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccHHccHccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHEHHHHHHHHHHHHHHHHHHHHEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccHHHHHHcccHcHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc

mmmdddmengglgpyqdrprtfpnmrskpyvpMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKwvlskdegppemaQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFrnttpqqeasgigrsnsaCITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLgvdtpgsmkvtdlplllvGYGFGASFVALFAQLgggiytkaaDVGADLVgkveqgipeddprnpavIADLvgdnvgdcAARGADLFESIAAEIISAMILGGTMvqrcklenpsgfilfPLVVHSFDLVISSIGILsirssrdssvkapiedpmailQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYytdykhepvralalssstghgtniiagvslglestappvLVISVSIVSAYWLgqtsglvdesgnpiggLFGTAVATMGMLSTAAYVLTMDmfgpiadnaggivemsqqpesVREITDVLDAVgnttkattKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLCGR

mmmdddmengglgpyqdrprtfpnmrSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEqgipeddprNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGIlsirssrdssvKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLwhlhlcgr

MMMDDDMENGGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRvlfvllllclgvvFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWvsvranvrvssaarrsarEALQIAVRAGGFSaivvvgmavigiaiLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFesiaaeiisaMILGGTMVQRCKLENPSGFILFPLVVHSFdlvissigilsirssrdssvKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLvisvsivsAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKgfaigsaalasfllfsaYMDEVATFAQEPFKQlakllrrllmrledsslrGLVSWSTRRSQTMLAVSQLWHLHLCGR

****************************PYVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSK*********ISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTP*****GIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGI*******PAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIR**********IEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIV*****************************FAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLC**

*****************************YVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSS***RSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLCG*

*********GGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRV********REALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIR********APIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLCGR

*******************RTFPNMRSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQLWHLHLCGR

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		652	2.2.26 [Sep-21-2011]
Q9FWR2		802	Pyrophosphate-energized m	yes	no	0.932	0.758	0.856	0.0
Q56ZN6		802	Pyrophosphate-energized m	no	no	0.932	0.758	0.856	0.0
Q2RLE0		682	K(+)-insensitive pyrophos	yes	no	0.730	0.697	0.520	1e-135
Q8RCX1		711	K(+)-insensitive pyrophos	yes	no	0.788	0.722	0.482	1e-128
Q8VRZ3		711	K(+)-insensitive pyrophos	yes	no	0.757	0.694	0.406	1e-102
Q8VRZ2		718	K(+)-insensitive pyrophos	yes	no	0.753	0.683	0.414	4e-99
Q8G1E6		718	K(+)-insensitive pyrophos	yes	no	0.75	0.681	0.409	6e-99
Q8YGH4		718	K(+)-insensitive pyrophos	yes	no	0.75	0.681	0.409	2e-98
Q8UG67		714	K(+)-insensitive pyrophos	yes	no	0.751	0.686	0.404	2e-98
O68460		702	K(+)-insensitive pyrophos	yes	no	0.703	0.653	0.408	4e-98

>sp\|Q9FWR2\|AVPX_ARATH Pyrophosphate-energized membrane proton pump 3 OS=Arabidopsis thaliana GN=AVPL2 PE=2 SV=1	Back alignment and function desciption

 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/608 (85%), Positives = 565/608 (92%)

Query: 1   MMMDDDMENGGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYI 60
           MMMD+D+E   L  Y D+PRTFP+MRSK Y P+I RIL  +N+R L VLLLL  G +FY+
Sbjct: 1   MMMDEDVEQATLVSYSDKPRTFPDMRSKTYSPLIIRILRNLNVRALSVLLLLSFGGIFYM 60

Query: 61  GASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGT 120
           GA TSPIIVFVF VCII+F+LS+YL KWVL+KDEGPPEM QISDAIRDGAEGF RTQYGT
Sbjct: 61  GARTSPIIVFVFVVCIISFMLSVYLTKWVLAKDEGPPEMVQISDAIRDGAEGFLRTQYGT 120

Query: 121 ISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWV 180
           ISKMA LLA VI CIYLFRN TPQQEASG+GR+ SA ITVAAFLLGALCSGIAGYVGMWV
Sbjct: 121 ISKMAFLLAFVILCIYLFRNLTPQQEASGLGRTMSAYITVAAFLLGALCSGIAGYVGMWV 180

Query: 181 SVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGS 240
           SVRANVRVSSAARRSAREALQIAVRAGGFSA+VVVGMAVIGIAILY+TFYVWL VD+PGS
Sbjct: 181 SVRANVRVSSAARRSAREALQIAVRAGGFSALVVVGMAVIGIAILYSTFYVWLDVDSPGS 240

Query: 241 MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVI 300
           MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTK ADVGADLVGKVE GIPEDDPRNPAVI
Sbjct: 241 MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKGADVGADLVGKVEHGIPEDDPRNPAVI 300

Query: 301 ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDL 360
           ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTM Q+CK+E+PSGFILFPLVVHSFDL
Sbjct: 301 ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQKCKIEDPSGFILFPLVVHSFDL 360

Query: 361 VISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSA 420
           VISSIGILSI+ +R++SVK+P+EDPM +LQKGYS+T++LAVLTFGASTRWLLYTEQAPSA
Sbjct: 361 VISSIGILSIKGTRNASVKSPVEDPMVVLQKGYSLTIILAVLTFGASTRWLLYTEQAPSA 420

Query: 421 WLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTA 480
           WLNF +CGLVGIITAY+FVWI++YYTDYK+EPVR LAL+SSTGHGTNIIAGVSLGLESTA
Sbjct: 421 WLNFFMCGLVGIITAYVFVWISRYYTDYKYEPVRTLALASSTGHGTNIIAGVSLGLESTA 480

Query: 481 PPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 540
            PVLVISV+I+SA+WLG TSGL+DE GNP GGLFGTAVATMGMLSTAAYVLTMDMFGPIA
Sbjct: 481 LPVLVISVAIISAFWLGNTSGLIDEKGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 540

Query: 541 DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATF 600
           DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEV+ F
Sbjct: 541 DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAF 600

Query: 601 AQEPFKQL 608
           A   FK++
Sbjct: 601 ANVSFKEV 608

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp\|Q56ZN6\|AVP2_ARATH Pyrophosphate-energized membrane proton pump 2 OS=Arabidopsis thaliana GN=AVPL1 PE=1 SV=2	Back alignment and function description

>sp\|Q2RLE0\|HPPA2_MOOTA K(+)-insensitive pyrophosphate-energized proton pump OS=Moorella thermoacetica (strain ATCC 39073) GN=hppA2 PE=3 SV=1	Back alignment and function description

>sp\|Q8RCX1\|HPPA_THETN K(+)-insensitive pyrophosphate-energized proton pump OS=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=hppA PE=3 SV=1	Back alignment and function description

>sp\|Q8VRZ3\|HPPA_RHIME K(+)-insensitive pyrophosphate-energized proton pump OS=Rhizobium meliloti (strain 1021) GN=hppA PE=3 SV=2	Back alignment and function description

>sp\|Q8VRZ2\|HPPA_OCHA4 K(+)-insensitive pyrophosphate-energized proton pump OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hppA PE=3 SV=2	Back alignment and function description

>sp\|Q8G1E6\|HPPA_BRUSU K(+)-insensitive pyrophosphate-energized proton pump OS=Brucella suis biovar 1 (strain 1330) GN=hppA PE=3 SV=1	Back alignment and function description

>sp\|Q8YGH4\|HPPA_BRUME K(+)-insensitive pyrophosphate-energized proton pump OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=hppA PE=3 SV=2	Back alignment and function description

>sp\|Q8UG67\|HPPA_AGRT5 K(+)-insensitive pyrophosphate-energized proton pump OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hppA PE=1 SV=1	Back alignment and function description

>sp\|O68460\|HPPA_RHORT K(+)-insensitive pyrophosphate-energized proton pump OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hppA PE=1 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		652
255544488		767	Pyrophosphate-energized membrane proton	0.927	0.788	0.896	0.0
297735766		800	unnamed protein product [Vitis vinifera]	0.929	0.757	0.896	0.0
359483296		895	PREDICTED: pyrophosphate-energized membr	0.929	0.677	0.896	0.0
356523476		946	PREDICTED: pyrophosphate-energized membr	0.932	0.642	0.863	0.0
449447998		801	PREDICTED: pyrophosphate-energized membr	0.929	0.756	0.884	0.0
75172888		802	RecName: Full=Pyrophosphate-energized me	0.932	0.758	0.856	0.0
334182631		851	Pyrophosphate-energized membrane proton	0.932	0.714	0.856	0.0
356521548		801	PREDICTED: pyrophosphate-energized membr	0.930	0.757	0.864	0.0
218190921		799	hypothetical protein OsI_07556 [Oryza sa	0.927	0.757	0.859	0.0
115446543		799	Os02g0537900 [Oryza sativa Japonica Grou	0.927	0.757	0.859	0.0

>gi\|255544488\|ref\|XP_002513305.1\| Pyrophosphate-energized membrane proton pump, putative [Ricinus communis] gi\|223547213\|gb\|EEF48708.1\| Pyrophosphate-energized membrane proton pump, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1082 bits (2799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/608 (89%), Positives = 581/608 (95%), Gaps = 3/608 (0%)

Query: 1   MMMDDDMENGGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRVLFVLLLLCLGVVFYI 60
           MMMDDD+E G   PYQDRPRTFPNMR+KPY P++FR+LM IN+RVLF++LLL LG +FYI
Sbjct: 1   MMMDDDVEGG---PYQDRPRTFPNMRTKPYTPIVFRVLMGINVRVLFIILLLGLGAIFYI 57

Query: 61  GASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGT 120
           GA+TSPIIVFVF++CII+F+LSIYL KWVL+KDEGPPEM QISDAIRDGAEGFFRTQYGT
Sbjct: 58  GATTSPIIVFVFTICIISFLLSIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGT 117

Query: 121 ISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWV 180
           ISKMA LLALVI CIYLFR+TTPQQEA G+GRS SA ITVAAFLLGALCSGIAGYVGMWV
Sbjct: 118 ISKMAVLLALVILCIYLFRSTTPQQEAYGLGRSTSAYITVAAFLLGALCSGIAGYVGMWV 177

Query: 181 SVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGS 240
           SVRANVRVSSAARRSAREALQIAVRAGGFSA+VVVGMAVIGIAILYA FYVWLGVDTPGS
Sbjct: 178 SVRANVRVSSAARRSAREALQIAVRAGGFSAMVVVGMAVIGIAILYAVFYVWLGVDTPGS 237

Query: 241 MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVI 300
           MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVI
Sbjct: 238 MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVI 297

Query: 301 ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDL 360
           ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTM QRCK+E+PSGFILFPLV+HSFDL
Sbjct: 298 ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVIHSFDL 357

Query: 361 VISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSA 420
           VISSIGILSIRS+RDSSVK+ +EDPMAILQKGYSVT+VLAV+TFGASTRW+L+TEQAPSA
Sbjct: 358 VISSIGILSIRSTRDSSVKSAMEDPMAILQKGYSVTIVLAVITFGASTRWMLHTEQAPSA 417

Query: 421 WLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTA 480
           W NFALCGLVGIITAY+FVWITKYYTDYKHEPVR LAL+S+TGHGTNIIAGVSLGLESTA
Sbjct: 418 WFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALASTTGHGTNIIAGVSLGLESTA 477

Query: 481 PPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 540
            PV+VIS+SIVSA+WLG TSGLVDE+G P GGLFGTAVATMGMLSTAAYVLTMDMFGPIA
Sbjct: 478 LPVIVISISIVSAFWLGHTSGLVDEAGKPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 537

Query: 541 DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATF 600
           DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATF
Sbjct: 538 DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATF 597

Query: 601 AQEPFKQL 608
           A  PF Q+
Sbjct: 598 AHVPFNQV 605

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297735766\|emb\|CBI18453.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359483296\|ref\|XP_002265811.2\| PREDICTED: pyrophosphate-energized membrane proton pump 3 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356523476\|ref\|XP_003530364.1\| PREDICTED: pyrophosphate-energized membrane proton pump 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|449447998\|ref\|XP_004141753.1\| PREDICTED: pyrophosphate-energized membrane proton pump 3-like [Cucumis sativus] gi\|449491781\|ref\|XP_004159001.1\| PREDICTED: pyrophosphate-energized membrane proton pump 3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|75172888\|sp\|Q9FWR2.1\|AVPX_ARATH RecName: Full=Pyrophosphate-energized membrane proton pump 3; AltName: Full=AVP1-like protein 2; AltName: Full=Pyrophosphate-energized inorganic pyrophosphatase 3; Short=H(+)-PPase 3 gi\|9954727\|gb\|AAG09080.1\|AC026237_1 Putative vacuolar-type H+-translocating inorganic pyrophosphatase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334182631\|ref\|NP_173122.2\| Pyrophosphate-energized membrane proton pump 3 [Arabidopsis thaliana] gi\|332191375\|gb\|AEE29496.1\| Pyrophosphate-energized membrane proton pump 3 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356521548\|ref\|XP_003529416.1\| PREDICTED: pyrophosphate-energized membrane proton pump 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|218190921\|gb\|EEC73348.1\| hypothetical protein OsI_07556 [Oryza sativa Indica Group]	Back alignment and taxonomy information

>gi|115446543|ref|NP_001047051.1| Os02g0537900 [Oryza sativa Japonica Group] gi|50251984|dbj|BAD27918.1| putative vacuolar-type H+-translocating inorganic pyrophosphatase [Oryza sativa Japonica Group] gi|50252660|dbj|BAD28829.1| putative vacuolar-type H+-translocating inorganic pyrophosphatase [Oryza sativa Japonica Group] gi|113536582|dbj|BAF08965.1| Os02g0537900 [Oryza sativa Japonica Group] gi|222623005|gb|EEE57137.1| hypothetical protein OsJ_07039 [Oryza sativa Japonica Group]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		652
TAIR\|locus:2037543		802	VP2 "vacuolar H+-pyrophosphata	0.930	0.756	0.719	1.2e-232
TIGR_CMR\|DET_0766		708	DET_0766 "V-type H(+)-transloc	0.478	0.440	0.408	1.4e-93
TAIR\|locus:2036134		770	AVP1 [Arabidopsis thaliana (ta	0.693	0.587	0.325	1.1e-57
GENEDB_PFALCIPARUM\|PF14_0541		717	PF14_0541 "V-type H(+)-translo	0.605	0.550	0.363	4.2e-56
UNIPROTKB\|Q8IKR1		717	PF14_0541 "V-type H(+)-translo	0.605	0.550	0.363	4.2e-56
TIGR_CMR\|GSU_3291		680	GSU_3291 "V-type H(+)-transloc	0.523	0.501	0.354	4.8e-56
TIGR_CMR\|DET_0784		679	DET_0784 "V-type H(+)-transloc	0.573	0.550	0.342	2.3e-52
TIGR_CMR\|CHY_0286		686	CHY_0286 "V-type H(+)-transloc	0.535	0.508	0.334	7.6e-42

TAIR\|locus:2037543 VP2 "vacuolar H+-pyrophosphatase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2244 (795.0 bits), Expect = 1.2e-232, P = 1.2e-232
 Identities = 437/607 (71%), Positives = 474/607 (78%)

Query:     1 MMMDDDMENGGLGPYQDRPRTFPNMRSKPYVPMIFRILMRINIRXXXXXXXXXXXXXFYI 60
             MMMD+D+E   L  + DRPR FPNMRSK Y P+IFRI+ ++N+R             FY+
Sbjct:     1 MMMDEDVEQASLMSFNDRPRAFPNMRSKTYSPLIFRIIRKLNVRVLSIILLFCFGAIFYM 60

Query:    61 GASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGT 120
             GASTSPIIVFVF+VCII+F+LSIYL KWVL+KDEGPPEM +ISDAIRDGAEGFFRTQY T
Sbjct:    61 GASTSPIIVFVFTVCIISFLLSIYLTKWVLAKDEGPPEMVEISDAIRDGAEGFFRTQYST 120

Query:   121 ISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWX 180
             ISKMA LLA VI CIYLFR+ TPQQEA+G+GR+ SA ITVAAFLLGALCSGIAGYVGMW 
Sbjct:   121 ISKMAILLAFVILCIYLFRSLTPQQEAAGLGRAMSAYITVAAFLLGALCSGIAGYVGMWV 180

Query:   181 XXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGS 240
                              EALQIAVRAGGFS              LY+TFYVWLGV +PGS
Sbjct:   181 SVRANVRVSSAARRSAREALQIAVRAGGFSALVVVGMAVIGIAILYSTFYVWLGVGSPGS 240

Query:   241 MKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVI 300
             M VTDLPLLLVGYGFGASFVALFAQLGGGIYTK ADVGADLVGKVEQGIPEDDPRNPAVI
Sbjct:   241 MNVTDLPLLLVGYGFGASFVALFAQLGGGIYTKGADVGADLVGKVEQGIPEDDPRNPAVI 300

Query:   301 ADLVGDNVGDCAARGADLFXXXXXXXXXXMILGGTMVQRCKLENPSGFILFPLVVHSFXX 360
             ADLVGDNVGDCAARGADLF          MILGGTM ++CK+E+PSGFILFPLVVHSF  
Sbjct:   301 ADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAKKCKIEDPSGFILFPLVVHSFDL 360

Query:   361 XXXXXXXXXXXXXXXXXXKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSA 420
                               K+P+EDPMA+LQKGYS+T++LAV+TFGASTRWLLYTEQAPSA
Sbjct:   361 IISSIGILSIKGTRDASVKSPVEDPMAVLQKGYSLTIILAVITFGASTRWLLYTEQAPSA 420

Query:   421 WLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTA 480
             W NFALCGLVGIITAYIFVWI+KYYTDYKHEPVR LAL+SSTGHGTNIIAGVSLGLESTA
Sbjct:   421 WFNFALCGLVGIITAYIFVWISKYYTDYKHEPVRTLALASSTGHGTNIIAGVSLGLESTA 480

Query:   481 PPVLXXXXXXXXAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 540
              PVL        AYWLG TSGLVDE+G P GGLFGTAVATMGMLSTAAYVLTMDMFGPIA
Sbjct:   481 LPVLTISVAIISAYWLGNTSGLVDENGIPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIA 540

Query:   541 DNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKXXXXXXXXXXXXXXXXXYMDEVATF 600
             DNAGGIVEMSQQPESVREITD+LDAVGNTTKATTK                 YMDEV+ F
Sbjct:   541 DNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAF 600

Query:   601 AQEPFKQ 607
             A   FK+
Sbjct:   601 ANVSFKE 607

GO:0004427 "inorganic diphosphatase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0009678 "hydrogen-translocating pyrophosphatase activity" evidence=IEA;IDA;TAS

GO:0015992 "proton transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TIGR_CMR\|DET_0766 DET_0766 "V-type H(+)-translocating pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TAIR\|locus:2036134 AVP1 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

GENEDB_PFALCIPARUM\|PF14_0541 PF14_0541 "V-type H(+)-translocating pyrophosphatase, putative" [Plasmodium falciparum (taxid:5833)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8IKR1 PF14_0541 "V-type H(+)-translocating pyrophosphatase, putative" [Plasmodium falciparum 3D7 (taxid:36329)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_3291 GSU_3291 "V-type H(+)-translocating pyrophosphatase" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0784 DET_0784 "V-type H(+)-translocating pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|CHY_0286 CHY_0286 "V-type H(+)-translocating pyrophosphatase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2RLE0	HPPA2_MOOTA	3, ., 6, ., 1, ., 1	0.5200	0.7300	0.6979	yes	no
Q9FWR2	AVPX_ARATH	3, ., 6, ., 1, ., 1	0.8569	0.9325	0.7581	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1.1	0.991
3rd Layer	3.6.1	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		652
PLN02277		730	PLN02277, PLN02277, H(+) -translocating inorganic	0.0
pfam03030		669	pfam03030, H_PPase, Inorganic H+ pyrophosphatase	0.0
PRK00733		666	PRK00733, hppA, membrane-bound proton-translocatin	0.0
COG3808		703	COG3808, OVP1, Inorganic pyrophosphatase [Energy p	1e-154
TIGR01104		695	TIGR01104, V_PPase, vacuolar-type H(+)-translocati	1e-135
PLN02255		765	PLN02255, PLN02255, H(+) -translocating inorganic	4e-93

>gnl\|CDD\|177916 PLN02277, PLN02277, H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

 Score = 1017 bits (2632), Expect = 0.0
 Identities = 472/536 (88%), Positives = 512/536 (95%)

Query: 73  SVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVI 132
           +VCII+ + S+YL KWVL+KDEGPPEM +ISDAIRDGAEGFFRTQYGTISKMA +LA VI
Sbjct: 1   TVCIISLLFSLYLTKWVLAKDEGPPEMVEISDAIRDGAEGFFRTQYGTISKMAVVLAFVI 60

Query: 133 FCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAA 192
             IYLFR+ TPQQEA+G+GR+ SA ITVA+FLLGALCSGIAGYVGMWVSVRANVRVSSAA
Sbjct: 61  LGIYLFRSLTPQQEAAGLGRATSAYITVASFLLGALCSGIAGYVGMWVSVRANVRVSSAA 120

Query: 193 RRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVG 252
           RRSAREALQIAVRAGGFSA+VVVGM V+G+AILYATFYVWLGVD+PG MKVTDLPLLLVG
Sbjct: 121 RRSAREALQIAVRAGGFSALVVVGMTVLGVAILYATFYVWLGVDSPGGMKVTDLPLLLVG 180

Query: 253 YGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCA 312
           YGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCA
Sbjct: 181 YGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCA 240

Query: 313 ARGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRS 372
           ARGADLFESIAAEIISAMILGGTM +RCK+E+PSGFILFPLVVHSFDLV+SSIGILSI+ 
Sbjct: 241 ARGADLFESIAAEIISAMILGGTMAKRCKIEDPSGFILFPLVVHSFDLVVSSIGILSIKG 300

Query: 373 SRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGI 432
           +RDSSVK+P+EDPMA+LQKGYSVT++LAV+TFGASTRWLLYTEQAPSAW NFALCGLVGI
Sbjct: 301 TRDSSVKSPVEDPMAVLQKGYSVTIILAVVTFGASTRWLLYTEQAPSAWFNFALCGLVGI 360

Query: 433 ITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVS 492
           ITAY FVWI++YYTDYK+EPVR LAL+S+TGHGTNIIAGVSLGLESTA PVLVISV+I+S
Sbjct: 361 ITAYAFVWISQYYTDYKYEPVRTLALASTTGHGTNIIAGVSLGLESTALPVLVISVAIIS 420

Query: 493 AYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQ 552
           AYWLG TSGLVDE+GNP GGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQ
Sbjct: 421 AYWLGNTSGLVDENGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQ 480

Query: 553 PESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQL 608
           PESVREITD+LDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEV+ FA  PFK++
Sbjct: 481 PESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAGVPFKEV 536

Length = 730

>gnl\|CDD\|217327 pfam03030, H_PPase, Inorganic H+ pyrophosphatase	Back alignment and domain information

>gnl\|CDD\|234827 PRK00733, hppA, membrane-bound proton-translocating pyrophosphatase; Validated	Back alignment and domain information

>gnl\|CDD\|226330 COG3808, OVP1, Inorganic pyrophosphatase [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|213586 TIGR01104, V_PPase, vacuolar-type H(+)-translocating pyrophosphatase	Back alignment and domain information

>gnl\|CDD\|215143 PLN02255, PLN02255, H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		652
PLN02277		730	H(+) -translocating inorganic pyrophosphatase	100.0
TIGR01104		697	V_PPase vacuolar-type H(+)-translocating pyrophosp	100.0
PLN02255		765	H(+) -translocating inorganic pyrophosphatase	100.0
PF03030		682	H_PPase: Inorganic H+ pyrophosphatase; InterPro: I	100.0
PRK00733		666	hppA membrane-bound proton-translocating pyrophosp	100.0
COG3808		703	OVP1 Inorganic pyrophosphatase [Energy production	100.0

>PLN02277 H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

Probab=100.00  E-value=7.3e-185  Score=1528.71  Aligned_cols=566  Identities=84%  Similarity=1.286  Sum_probs=505.4

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCCccccccccCCC
Q 006285           74 VCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRS  153 (652)
Q Consensus        74 ~~~~gl~~a~~l~~~V~~~~~G~~~m~~Is~aI~eGA~aFL~rqYk~i~~~~iv~a~~i~~~~~~~~~~~~~~~~g~~~~  153 (652)
                      +|+++|+||+++++||+|||+|+||||||+++|||||++||+||||+|+++.++++++|++.+.+...++++...++++.
T Consensus         2 ~~~l~l~~a~~~~~~v~~~~~G~~~M~~Ia~~I~eGA~afL~~qyk~i~~~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~   81 (730)
T PLN02277          2 VCIISLLFSLYLTKWVLAKDEGPPEMVEISDAIRDGAEGFFRTQYGTISKMAVVLAFVILGIYLFRSLTPQQEAAGLGRA   81 (730)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccch
Confidence            58999999999999999999999999999999999999999999999999999999998654433222223334456666


Q ss_pred             ccchhHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHhhcHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 006285          154 NSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWL  233 (652)
Q Consensus       154 ~~~~~taiaFl~Ga~~S~laGyiGM~vAt~ANvRtA~AA~~g~~~Al~vAfrgGsVmGl~vvgL~llgl~~l~~~~~~~~  233 (652)
                      ..+|++++||++|++||++|||+|||+|||+|+|||+|||+|+++||++|||||+||||+|+||+|+|++++|+++..++
T Consensus        82 ~~~~~~a~~Fl~Ga~~S~laG~iGM~vAt~aNvRtA~AA~~~~~~al~vAfrgGaVmGl~vvgl~Llgl~~~~~i~~~~~  161 (730)
T PLN02277         82 TSAYITVASFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSALVVVGMTVLGVAILYATFYVWL  161 (730)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999999998655


Q ss_pred             cCCCCCCCcccchhhhHhhhhhhhHHHHHHHHHhCcccccccccccccccccccCCCCCCCCCcchhccccCCCcccccc
Q 006285          234 GVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAA  313 (652)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~GfgfGaS~vALFaRvGGGIYTKAADVGADLVGKVEagIPEDDPRNPAVIADnVGDNVGD~AG  313 (652)
                      ....+...+..+.+++++||+||||++|||+||||||||||||||||||||||+||||||||||||||||||||||||||
T Consensus       162 ~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGDvAG  241 (730)
T PLN02277        162 GVDSPGGMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAA  241 (730)
T ss_pred             cccccccccchhHHHHHHhhhccHHHHHHHHHHcCceeeeccccchhhhhhhhcCCCCCCCCCchHHHHHhCCccccccc
Confidence            32111111123467899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcchHHHHHHHHHHHHHHHhhhhhhcccCCCccchhHHHHHHHHHHHHHHHHhhheeccCCCCCCCCCCChHHHHHHHH
Q 006285          314 RGADLFESIAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAPIEDPMAILQKGY  393 (652)
Q Consensus       314 mgADLFESy~~siiaamiLg~~~~~~~~~~~~~~~i~fPllv~a~gii~SiiGi~~v~~~~~~~~~~~~~~p~~aL~~g~  393 (652)
                      |||||||||++++|++|+||..++.+.++......++|||+++++||++|++|+++||.+++++.+.+++||+++||||+
T Consensus       242 mgADLFESy~~siiaamiLg~~~~~~~~~~~~~~~v~~Pl~i~~~gii~Siig~~~vr~~~~~~~~~~~~~p~~aL~~g~  321 (730)
T PLN02277        242 RGADLFESIAAEIISAMILGGTMAKRCKIEDPSGFILFPLVVHSFDLVVSSIGILSIKGTRDSSVKSPVEDPMAVLQKGY  321 (730)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhhccCcccccccchHHHHHHHHHHHHHHHHHheEeccCccccccccccHHHHHHHHH
Confidence            99999999999999999999765432222211245899999999999999999999997664434445679999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCcchhHHHHHHHHHHHHHHHHHhhhheecCCCCchhHHHHhhcCCCchhHHHHHHh
Q 006285          394 SVTVVLAVLTFGASTRWLLYTEQAPSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVS  473 (652)
Q Consensus       394 ~vs~il~~v~~~~~~~~~l~~~~~~~~~~~~f~~~l~Gl~~g~lI~~iTeYyTs~~y~PVr~IA~aS~TG~ATnII~Gla  473 (652)
                      ++|+++++++++++++|++.....+..||++|+|+++|+++|++|+++||||||++||||||||++|+||||||||+||+
T Consensus       322 ~vs~~l~~v~~~~~~~~~l~~~~~~~~~~~~f~~~~~Gl~~g~lI~~iTeYYTs~~y~PV~~IA~aS~tG~ATnII~Gla  401 (730)
T PLN02277        322 SVTIILAVVTFGASTRWLLYTEQAPSAWFNFALCGLVGIITAYAFVWISQYYTDYKYEPVRTLALASTTGHGTNIIAGVS  401 (730)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHeeeeeCCCCCCcHHHHHHHhCcChHHHHHHHHH
Confidence            99999999999999998875332333578999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcchhHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHHHHhhhhhhhhheeccccccccccchhhhccCCC
Q 006285          474 LGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQP  553 (652)
Q Consensus       474 vGm~St~~Pvl~I~vai~~sy~l~~~sg~~~~~~~~~~GlyGiAlAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~  553 (652)
                      +|||||++|+++|+++|++||+++.++++.++.+++..|+||+|+|++|||||++++|++|+||||+||||||+|||+||
T Consensus       402 ~Gm~St~~Pvl~I~~ai~~sy~l~~~~~~~~~~~~~~~GlyGialAa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~  481 (730)
T PLN02277        402 LGLESTALPVLVISVAIISAYWLGNTSGLVDENGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQP  481 (730)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHhhcceeEEeecccCcccCcccHHHHccCC
Confidence            99999999999999999999999988888777777778999999999999999999999999999999999999999999


Q ss_pred             hhHhhhchhhhhcCCcccccccchhhhhHHHHHHHHHHHHHHHhhhhccCCCcccccCCcceehhhccccCCceeeeecc
Q 006285          554 ESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTR  633 (652)
Q Consensus       554 ~eVR~~TD~LDAvGNTTkAi~KGfAIGSAaLaalaLF~ay~~~~~~~~~~~~~~v~l~~P~V~vGl~~~~~~~~~~~~~~  633 (652)
                      ||||||||+|||+||||||+|||||||||+|+||+||++|+++++......++.+||.||+|++|+|+|  +.+.+||+.
T Consensus       482 ~~VR~~TD~LDavGNTTaAi~KGfAIGSAaL~alaLF~ay~~~~~~~~~~~~~~~~l~~p~Vl~GlliG--~mlpflFsa  559 (730)
T PLN02277        482 ESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAGVPFKEVDIAIPEVFVGGLLG--SMLIFLFSA  559 (730)
T ss_pred             chhhhhccccccccCcchhhcccchhHHHHHHHHHHHHHHHHHhhhhhccccceeeCCCcHHHHHHHHH--HhHHHHHHH
Confidence            999999999999999999999999999999999999999999986432222457999999999999999  999999984


Q ss_pred             cchhHHHHHh
Q 006285          634 RSQTMLAVSQ  643 (652)
Q Consensus       634 ~~~~~~~~~~  643 (652)
                        .+|.+|.+
T Consensus       560 --l~m~AVg~  567 (730)
T PLN02277        560 --WACAAVGR  567 (730)
T ss_pred             --HHHHHHHH
Confidence              56777754

>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase	Back alignment and domain information

>PLN02255 H(+) -translocating inorganic pyrophosphatase	Back alignment and domain information

>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively)	Back alignment and domain information

>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated	Back alignment and domain information

>COG3808 OVP1 Inorganic pyrophosphatase [Energy production and conversion]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		652
4a01_A		766	Crystal Structure Of The H-Translocating Pyrophosph		2e-58
4av3_A		735	Crystal Structure Of Thermotoga Maritima Sodium Pum		1e-54

>pdb|4A01|A Chain A, Crystal Structure Of The H-Translocating Pyrophosphatase Length = 766

Back alignment and structure

Iteration: 1

Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 167/512 (32%), Positives = 247/512 (48%), Gaps = 51/512 (9%) Query: 88 WVLSKDEGPPEM------AQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFR-- 139 +++ ++EG + A+I +AI +GA F T+Y + A++IF ++L Sbjct: 57 YLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIF-LFLGSVE 115 Query: 140 --NTTPQQEASGIGRS-----NSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXX 192 +T+PQ + ++ +A + +FLLG + S ++G++GM Sbjct: 116 GFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEA 175 Query: 193 XXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVG 252 +A A R+G F ++ G D G + + G Sbjct: 176 RKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEA------ITG 229 Query: 253 YGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCA 312 YG G S +ALF ++GGGIYTKAADVGADLVGKVE+ IPEDDPRNPAVIAD VGDNVGD A Sbjct: 230 YGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIA 289 Query: 313 ARGADLFXXXXXXXXXXMILGGTMVQRCKLENPSGFILFPLVVHSFXXXXXXXXXXXXXX 372 G+DLF +++ + L + +L+PL+V S Sbjct: 290 GMGSDLFGSYAESSCAALVVAS--ISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATD 347 Query: 373 XXXXXXKAPIEDPMAILQKGYSVTVVL-----AVLTFGA-STRWLLYT---EQAPSAWLN 423 IE L+K ++ VL AV++F A T + ++ ++ +W Sbjct: 348 FFEIKAVKEIEPA---LKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQL 404 Query: 424 FALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPV 483 F LC VG+ I ++T+YYT + PV+ +A S TG TN+I G++LG +S P+ Sbjct: 405 F-LCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPI 463 Query: 484 LXXXXXXXXAYWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNA 543 ++ ++G AVA +GMLST A L +D +GPI+DNA Sbjct: 464 FAIAISIFVSF--------------TFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNA 509 Query: 544 GGIVEMSQQPESVREITDVLDAVGNTTKATTK 575 GGI EM+ +RE TD LDA GNTT A K Sbjct: 510 GGIAEMAGMSHRIRERTDALDAAGNTTAAIGK 541

PyMOL of 4a01

>pdb|4AV3|A Chain A, Crystal Structure Of Thermotoga Maritima Sodium Pumping Membrane Integral Pyrophosphatase With Metal Ions In Active Site Length = 735

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		652
4a01_A		766	Proton pyrophosphatase; hydrolase, membrane protei	0.0
4av3_A		735	K(+)-stimulated pyrophosphate-energized sodium PU;	1e-180
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07

>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata} Length = 766	Back alignment and structure

 Score =  555 bits (1431), Expect = 0.0
 Identities = 185/585 (31%), Positives = 288/585 (49%), Gaps = 49/585 (8%)

Query: 38  LMRINIRVLFVLLLLCLGVVF--YIGASTSPIIVFVFSVCIITFILSIYLCKWVLSKDEG 95
           ++      + + +   +G+ F  +     S + +                  +++ ++EG
Sbjct: 5   ILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEG 64

Query: 96  P------PEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIY--------LFRNT 141
                   + A+I +AI +GA  F  T+Y  +       A++IF             +  
Sbjct: 65  INDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQAC 124

Query: 142 TPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQ 201
           +  +  +      +A  +  +FLLG + S ++G++GM ++  AN R +  AR+   +A  
Sbjct: 125 SYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFI 184

Query: 202 IAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVA 261
            A R+G     ++    ++ + I    F ++ G D         L   + GYG G S +A
Sbjct: 185 TAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWG------GLFEAITGYGLGGSSMA 238

Query: 262 LFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFES 321
           LF ++GGGIYTKAADVGADLVGKVE+ IPEDDPRNPAVIAD VGDNVGD A  G+DLF S
Sbjct: 239 LFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGS 298

Query: 322 IAAEIISAMILGGTMVQRCKLENPSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAP 381
            A    +A+++         L +    +L+PL+V S  +++  +  L      +      
Sbjct: 299 YAESSCAALVVASISSF--GLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEI---KA 353

Query: 382 IEDPMAILQKGYSVTVVLAVLTFGASTRWLL--------YTEQAPSAWLNFALCGLVGII 433
           +++    L+K   ++ VL  +     +   L        +  Q         LC  VG+ 
Sbjct: 354 VKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLW 413

Query: 434 TAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSA 493
              I  ++T+YYT   + PV+ +A S  TG  TN+I G++LG +S   P+  I++SI  +
Sbjct: 414 AGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVS 473

Query: 494 YWLGQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQP 553
           +                  ++G AVA +GMLST A  L +D +GPI+DNAGGI EM+   
Sbjct: 474 FTF--------------AAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMS 519

Query: 554 ESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVA 598
             +RE TD LDA GNTT A  KGFAIGSAAL S  LF A++   +
Sbjct: 520 HRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAS 564

PyMOL of 4a01

>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A Length = 735	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		652
4av3_A		735	K(+)-stimulated pyrophosphate-energized sodium PU;	100.0
4a01_A		766	Proton pyrophosphatase; hydrolase, membrane protei	100.0

>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A	Back alignment and structure

Probab=100.00  E-value=2e-177  Score=1481.86  Aligned_cols=535  Identities=37%  Similarity=0.561  Sum_probs=469.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCCccc
Q 006285           66 PIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQ  145 (652)
Q Consensus        66 ~~~~~~~~~~~~gl~~a~~l~~~V~~~~~G~~~m~~Is~aI~eGA~aFL~rqYk~i~~~~iv~a~~i~~~~~~~~~~~~~  145 (652)
                      ++..+.+++++++++|++++++||+|||+|+||||||+++|||||++||+||||+|++|.+++++++++.          
T Consensus        11 ~v~~l~~~~~i~~l~~a~~~~~~v~~~~~G~~~M~eIa~~I~eGA~afL~rqyk~i~~~~vv~~~ll~~~----------   80 (735)
T 4av3_A           11 YVAALFFLIPLVALGFAAANFAAVVRKPEGTERMKEISSYIRSGADSFLAHETKAIFKVAIVIAILLMIF----------   80 (735)
T ss_dssp             CHHHHHHTHHHHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence            3455677889999999999999999999999999999999999999999999999999999999988653          


Q ss_pred             cccccCCCccchhHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHhh--cHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 006285          146 EASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARR--SAREALQIAVRAGGFSAIVVVGMAVIGIA  223 (652)
Q Consensus       146 ~~~g~~~~~~~~~taiaFl~Ga~~S~laGyiGM~vAt~ANvRtA~AA~~--g~~~Al~vAfrgGsVmGl~vvgL~llgl~  223 (652)
                               .+|+++++|++|++||++|||+|||+|||||+|||+|||+  ++++||++|||||+||||+|+||+|+|++
T Consensus        81 ---------~~~~~ai~Fl~Ga~~S~~aGyiGM~vAt~ANvRTA~AA~~s~~l~~aL~vAFrgGaVmGl~vvgl~Llgl~  151 (735)
T 4av3_A           81 ---------TTWQTGVAFLLGAVMSASAGIVGMKMATRANVRVAEAARTTKKIGPALKVAYQGGSVMGLSVGGFALLGLV  151 (735)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHhhhccchHHHHHHHHHHHHHHH
Confidence                     2588999999999999999999999999999999999984  69999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC----CC---CCCcccchhhhHhhhhhhhHHHHHHHHHhCcccccccccccccccccccCCCCCCCCC
Q 006285          224 ILYATFYVWLGVD----TP---GSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRN  296 (652)
Q Consensus       224 ~l~~~~~~~~~~~----~~---~~~~~~~~~~~l~GfgfGaS~vALFaRvGGGIYTKAADVGADLVGKVEagIPEDDPRN  296 (652)
                      ++|++|..++...    .+   ...+..+.++++.||+||||++|||+||||||||||||||||||||||+|||||||||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKaADVGADLVGKVEagIPEDDPRN  231 (735)
T 4av3_A          152 LVYLIFGKWMGQVDNLNIYTNWLGINFVPFAMTVSGYALGCSIIAMFDRVGGGVYTKAADMAADLVGKTELNLPEDDPRN  231 (735)
T ss_dssp             HHHHHTTTTTCHHHHCSCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC-----------C
T ss_pred             HHHHHHHHhcccccccccccccccccchhhhHHHhhhchhHHHHHHHHHHcCcceeccccccchhhhhhhcCCCCCCCCC
Confidence            9999875433210    00   0112234567899999999999999999999999999999999999999999999999


Q ss_pred             cchhccccCCCcccccccCcchHHHHHHHHHHHHHHHhhhhhhcc--cCC----------CccchhHHHHHHHHHHHHHH
Q 006285          297 PAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCK--LEN----------PSGFILFPLVVHSFDLVISS  364 (652)
Q Consensus       297 PAVIADnVGDNVGD~AGmgADLFESy~~siiaamiLg~~~~~~~~--~~~----------~~~~i~fPllv~a~gii~Si  364 (652)
                      ||||||||||||||||||||||||||++++|++|+|++.++....  ...          ....++|||+++++|+++|+
T Consensus       232 PAvIADNVGDNVGDvAGMgADLFESY~~sivAamvL~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~Pl~i~~~gii~Si  311 (735)
T 4av3_A          232 PATIADNVGDNVGDVAGLGADLLESFVGAIVSSIILASYMFPIYVQKIGENLVHQVPKETIQALISYPIFFALVGLGCSM  311 (735)
T ss_dssp             CTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEEEETTEEEESSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhhhcccccccccccccchHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998764311  000          01247799999999999999


Q ss_pred             HHhhheeccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC------CCcchhHHHHHHHHHHHHHHHH
Q 006285          365 IGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQ------APSAWLNFALCGLVGIITAYIF  438 (652)
Q Consensus       365 iGi~~v~~~~~~~~~~~~~~p~~aL~~g~~vs~il~~v~~~~~~~~~l~~~~------~~~~~~~~f~~~l~Gl~~g~lI  438 (652)
                      +|+++||.+++      .+||+++|+++++++.+++++++++++++++++..      ....|+++|+|+++|+++|++|
T Consensus       312 iG~~~v~~~~~------~~~~~~~l~~~~~~s~~~s~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~iGlv~g~lI  385 (735)
T 4av3_A          312 LGILYVIVKKP------SDNPQRELNISLWTSALLTVVLTAFLTYFYLKDLQGLDVLGFRFGAISPWFSAIIGIFSGILI  385 (735)
T ss_dssp             HHHHHHHHSCC------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHTCTTGGGHHHHHHHHHHHHHHHH
T ss_pred             Hhhheeeeccc------ccchhHHHhhhHHhhHHHHHHHHHHHHHHHhhhhhhcccccccccchHHHHHHHHHHHHHHHH
Confidence            99999998773      67899999999999999999999999999986532      2345678999999999999999


Q ss_pred             HhhhheecCCCCchhHHHHhhcCCCchhHHHHHHhhhhhcchhHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHH
Q 006285          439 VWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGTAV  518 (652)
Q Consensus       439 ~~iTeYyTs~~y~PVr~IA~aS~TG~ATnII~GlavGm~St~~Pvl~I~vai~~sy~l~~~sg~~~~~~~~~~GlyGiAl  518 (652)
                      +++||||||++|||||+|||+|+||||||||+||++|||||++|+++|+++|+.||+++              |+||+|+
T Consensus       386 ~~iTEYYTs~~~~PVr~IA~aS~TG~ATnII~GLavGm~St~~pvl~I~~~I~~s~~~a--------------GlyGiai  451 (735)
T 4av3_A          386 GFWAEYYTSYRYKPTQFLGKSSIEGTGMVISNGLSLGMKSVFPPTLTLVLGILFADYFA--------------GLYGVAI  451 (735)
T ss_dssp             HHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred             HHheeeecCCCCchHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998              8999999


Q ss_pred             HHHHhhhhhhhhheeccccccccccchhhhccCCChhHhhhchhhhhcCCcccccccchhhhhHHHHHHHHHHHHHHHhh
Q 006285          519 ATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVA  598 (652)
Q Consensus       519 Aa~GMLst~g~~la~DayGPIaDNAGGIaEMs~l~~eVR~~TD~LDAvGNTTkAi~KGfAIGSAaLaalaLF~ay~~~~~  598 (652)
                      ||+|||||++++|++|+||||+||||||+|||+|||||||+||+|||+||||||+|||||||||+|+||+||++|+++..
T Consensus       452 Aa~GMLst~gi~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTkAi~KGfAIGSAaL~AlaLfaay~~~~~  531 (735)
T 4av3_A          452 AALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPEVRKITDHLDAVGNTTAAIGKGFAIGSAIFAALSLFASYMFSQI  531 (735)
T ss_dssp             HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhccceEeeecccCccCCccchHHHccCChHHHHhhhccccccccccccccchhHhHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997642


Q ss_pred             hhc-----cCCCcccccCCcceehhhccccCCceeeeecccchhHHHHHh
Q 006285          599 TFA-----QEPFKQLAKLLRRLLMRLEDSSLRGLVSWSTRRSQTMLAVSQ  643 (652)
Q Consensus       599 ~~~-----~~~~~~v~l~~P~V~vGl~~~~~~~~~~~~~~~~~~~~~~~~  643 (652)
                      ...     ......+|+.||+|++|||+|  +.+.|||+.  .||.||.+
T Consensus       532 ~~~~~~~~~~~~~~~~l~~P~VlvGlliG--gmlpflFsa--ltm~AVgr  577 (735)
T 4av3_A          532 SPSDIGKPPSLVLLLNMLDARVIAGALLG--AAITYYFSG--YLISAVTK  577 (735)
T ss_dssp             CGGGSSSCGGGTSCCBTTSHHHHHHHHHH--HHHHHHHHH--HHHHHHHH
T ss_pred             hhhhhccccccceeeecccchhHHHHHHH--HHHHHHHHH--HHHHHHHH
Confidence            211     112346999999999999999  999999985  56777754

PyMOL of 4av3

>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00