Citrus Sinensis ID: 006309

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-
Protein Sequence
MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHccccHHHHHccccHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccHHHHHHcccccccccHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHcccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEEEEHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHccccccEHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
melvpfsddpdkksssttppwqdmfrsasirkpsatsnsqaplpeshapppsqanstapgqkttcsgdPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWseplqlglteTVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLknngprhsrsgFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFsttnvdstmSAVSSfrsksfgrtpfssyFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHveesnyaerlgvkkwmeendvpgmvdRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKhfviappagsseqskaltslspYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITsesggvteqvmgmlpiskparIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALfpifpfwfATIPAAVQLLLESRYIVAISLSVIHLVLLdygtceiqedipgyspyltglsiiggmtlfPSALELLVIgdliagsnygptdnyschctkgfvc
Flexible Loop (DISEMBL)
melvpfsddpdkksssttppwqdmfrSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKlknngprhsrsgfSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVssfrsksfgrtpfssyftRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISikshveesnyaerlgvkkwmeendvpgmvDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSkaltslspytqklmslrnrvtkrewKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Low Complexity Region (SEG)
MELVPFsddpdkksssttppWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEvffkvflkklkNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Disordered region (IsUnstruct)
*********************************************************************QVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNG****RSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIA*********************LMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFV*
Disordered Region (DISOPRED)
**LV*****************************************************************QVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Disordered Region (DISEMBL)
******************PPWQDMFRSASI***********************************SGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Disordered Region (DISPRO)
****************************************************************CSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNG***SRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKGFVC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	651	2.2.26 [Sep-21-2011]
B1AZA5	876	Transmembrane protein 245	yes	no	0.270	0.200	0.340	5e-13
Q9H330	911	Transmembrane protein 245	yes	no	0.270	0.193	0.335	5e-13
D3ZXD8	876	Transmembrane protein 245	yes	no	0.270	0.200	0.335	6e-13
E1BD52	868	Transmembrane protein 245	yes	no	0.331	0.248	0.304	5e-12

>sp|B1AZA5|TM245_MOUSE Transmembrane protein 245 OS=Mus musculus GN=Tmem245 PE=1 SV=1

 Score = 77.0 bits (188), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 452 SGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQVMGMLPISKPARIRCV--EVIDNA 507
           SG A + NFV  L+IFL  L+YL++S  E     + V+ + P+S+P     +  + ++ A
Sbjct: 645 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEA 703

Query: 508 ISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQL 567
           I GV  A++++A F G  TWL    F I+ +++ + LA I    P    ++A +PA + L
Sbjct: 704 IRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDL 763

Query: 568 LL-ESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS-PYLTGLSIIGGMTLFPSALELLV 625
            L +     AI L V HL+   +    I  DI G   PYLTGL++ GG       LE  +
Sbjct: 764 WLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAI 821

Query: 626 IGDLI 630
           IG ++
Sbjct: 822 IGPIL 826

Mus musculus (taxid: 10090)

>sp|Q9H330|TM245_HUMAN Transmembrane protein 245 OS=Homo sapiens GN=TMEM245 PE=1 SV=2

 Score = 76.6 bits (187), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 452 SGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQVMGMLPISKPARIRCV--EVIDNA 507
           SG A + NFV  L+IFL  L+YL++S  E     + V+ + P+S+P     +  + ++ A
Sbjct: 648 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEA 706

Query: 508 ISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQL 567
           I GV  A++++A F G  TWL    F I+ +++ + LA I    P    ++A +PA + L
Sbjct: 707 IRGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDL 766

Query: 568 LL-ESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS-PYLTGLSIIGGMTLFPSALELLV 625
            L +     AI L + HL+   +    I  DI G   PYLTGL++ GG       LE  +
Sbjct: 767 WLTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAI 824

Query: 626 IGDLI 630
           IG ++
Sbjct: 825 IGPIL 829

Homo sapiens (taxid: 9606)

>sp|D3ZXD8|TM245_RAT Transmembrane protein 245 OS=Rattus norvegicus GN=Tmem245 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 452 SGAAEVFNFVSQLMIFLWVLYYLITS--ESGGVTEQVMGMLPISKPARIRCV--EVIDNA 507
           SG A + NFV  L+IFL  L+YL++S  E     + V+ + P+S+P     +  + ++ A
Sbjct: 645 SGTA-LLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEA 703

Query: 508 ISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQL 567
           I GV  A++++A F G  TWL    F I+ +++ + LA I    P    ++A +PA + L
Sbjct: 704 IRGVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDL 763

Query: 568 LL-ESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYS-PYLTGLSIIGGMTLFPSALELLV 625
            L +     A+ L V HL+   +    I  DI G   PYLTGL++ GG       LE  +
Sbjct: 764 WLTQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAI 821

Query: 626 IGDLI 630
           IG ++
Sbjct: 822 IGPIL 826

Rattus norvegicus (taxid: 10116)

>sp|E1BD52|TM245_BOVIN Transmembrane protein 245 OS=Bos taurus GN=TMEM245 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 17/233 (7%)

Query: 412 QKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLST-----GYLIISGAAEVFNFVSQLMI 466
           Q    F ++ I     +      V+  +  L+ ST       L  SG A + NFV  L+I
Sbjct: 603 QDIASFVHENIETFLSILESLWVVMSRNVSLLFSTITTLLTILFYSGTA-LLNFVLSLII 661

Query: 467 FLWVLYYLITS--ESGGVTEQVMGMLPISKPARIRCV--EVIDNAIS---GVLLATVEIA 519
           FL  L+YL++S  E     + V+ + P+S+P     +  + ++ AI    GV  A++++A
Sbjct: 662 FLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRHSRGVFDASLKMA 721

Query: 520 FFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLL-ESRYIVAIS 578
            F G  TWL    F I+ +++ + LA I    P    ++A +PA + L L +     AI 
Sbjct: 722 GFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAIL 781

Query: 579 LSVIHLVLLDYGTCEIQEDIPGYS-PYLTGLSIIGGMTLFPSALELLVIGDLI 630
           L V HL+   +    I  DI G   PYLTGL++ GG   +   LE  +IG ++
Sbjct: 782 LLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGA--YYLGLEGAIIGPIL 832

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	651
255563592	651	conserved hypothetical protein [Ricinus	0.963	0.963	0.743	0.0
224061256	654	predicted protein [Populus trichocarpa]	0.980	0.975	0.720	0.0
297793067	648	hypothetical protein ARALYDRAFT_918735 [	0.953	0.958	0.686	0.0
18423808	648	uncharacterized protein [Arabidopsis tha	0.952	0.956	0.697	0.0
9758216	678	unnamed protein product [Arabidopsis tha	0.952	0.914	0.694	0.0
449463370	656	PREDICTED: uncharacterized protein LOC10	0.949	0.942	0.686	0.0
449517707	656	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.949	0.942	0.681	0.0
359494329	657	PREDICTED: uncharacterized protein LOC10	0.993	0.984	0.675	0.0
297788190	608	hypothetical protein ARALYDRAFT_921013 [	0.927	0.993	0.672	0.0
356566382	661	PREDICTED: uncharacterized protein LOC10	0.967	0.953	0.672	0.0

>gi|255563592|ref|XP_002522798.1| conserved hypothetical protein [Ricinus communis] gi|223538036|gb|EEF39649.1| conserved hypothetical protein [Ricinus communis]

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/631 (74%), Positives = 537/631 (85%), Gaps = 4/631 (0%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
           MELVP++D P  K  STT PWQDMFRSAS  KP  T++     P S +  P+ +NS  P 
Sbjct: 1   MELVPYTD-PKSKPESTTLPWQDMFRSASFNKP--TTSHPPKPPPSSSSKPNSSNSNNPD 57

Query: 61  QKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQ 120
           +KTT SGDPQVRLALYIA+AHAGLAFT+FILYF+ KLLQ+Y+RPIQWA+L SIPLRGIQ+
Sbjct: 58  RKTTLSGDPQVRLALYIAMAHAGLAFTIFILYFVCKLLQEYLRPIQWAVLCSIPLRGIQE 117

Query: 121 ALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR-SG 179
            LVAFW EPL LGLTETVLAVPVAIFK FVGTLVDIKEV  +VFLKK K +GPR +R SG
Sbjct: 118 TLVAFWKEPLALGLTETVLAVPVAIFKAFVGTLVDIKEVLLRVFLKKAKTSGPRRNRRSG 177

Query: 180 FSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTP 239
           FSKLVRWLVSF VFVIAYE IG +GSLVIL LGF+ S+   DST SAVSSFR+ SF R+ 
Sbjct: 178 FSKLVRWLVSFGVFVIAYERIGGMGSLVILGLGFMCSSKTADSTFSAVSSFRTNSFRRSA 237

Query: 240 FSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNY 299
             ++FTR I +RL+T+VAIGLIV M+V FLAG+IFFSYKIGVEGKDAVIS+KSHVEESNY
Sbjct: 238 IGAFFTRGISRRLKTMVAIGLIVAMIVGFLAGLIFFSYKIGVEGKDAVISLKSHVEESNY 297

Query: 300 AERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAG 359
           AER+G+KKWMEENDVPGMVD+YTTT YETVS+Q+DSLAMQYNMTE VTGIKHFVI+ PA 
Sbjct: 298 AERIGIKKWMEENDVPGMVDKYTTTVYETVSDQIDSLAMQYNMTELVTGIKHFVISTPAN 357

Query: 360 SSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAY 419
           SS+QS AL S SPYT+KL+SLR +V+ R+W +IY+E+DAIFREL+ITREDLV+KAK FA 
Sbjct: 358 SSQQSSALMSPSPYTEKLLSLRTKVSNRQWGEIYSELDAIFRELIITREDLVEKAKGFAL 417

Query: 420 QGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSES 479
           +G++VSQRVFA SASVLG  AKLM S G  IISGAAEVFNFVSQ M+F WVLYYLITSES
Sbjct: 418 RGMDVSQRVFASSASVLGGGAKLMFSVGNSIISGAAEVFNFVSQSMVFFWVLYYLITSES 477

Query: 480 GGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLY 539
           GGVTEQVM MLPI K A  RCVEV+DNAISGVLLAT EIAFFQGCLTWLLFR +KIHFLY
Sbjct: 478 GGVTEQVMQMLPIPKSASTRCVEVLDNAISGVLLATAEIAFFQGCLTWLLFRLYKIHFLY 537

Query: 540 MSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIP 599
           +ST LAFIS LFPIFP WFAT+PA +QL +ESRYI+AI+LS+IH+VL+DYG  EI+EDIP
Sbjct: 538 VSTVLAFISPLFPIFPSWFATLPATLQLAIESRYIMAITLSIIHVVLMDYGASEIKEDIP 597

Query: 600 GYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           GYS YLT LSI+GGMTLFPSA+E  ++G LI
Sbjct: 598 GYSEYLTALSILGGMTLFPSAVEGAIMGPLI 628

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061256|ref|XP_002300393.1| predicted protein [Populus trichocarpa] gi|222847651|gb|EEE85198.1| predicted protein [Populus trichocarpa]

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/645 (72%), Positives = 533/645 (82%), Gaps = 7/645 (1%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPES---HAPPPSQANST 57
           MELVP++D P+ K  S   PWQDMFRSAS RKPS T    +P   +   HAP     ++ 
Sbjct: 1   MELVPYTD-PNSKQDSL--PWQDMFRSASYRKPSTTPPPPSPPQPNAPPHAPNDHHHHNN 57

Query: 58  APGQKT-TCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLR 116
                T + SGDPQVRLALYIA+AHAGLAF +FILYF+ KLLQ Y+RPIQWAIL SIPLR
Sbjct: 58  KTSASTFSASGDPQVRLALYIAMAHAGLAFAIFILYFVCKLLQAYLRPIQWAILCSIPLR 117

Query: 117 GIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHS 176
           GIQQ LVAFW+EPLQLGLTETVLAVPV+IF VFVGTLVDIKEV  +VFLKK K +  R  
Sbjct: 118 GIQQTLVAFWTEPLQLGLTETVLAVPVSIFTVFVGTLVDIKEVCLRVFLKKSKGDSSRRH 177

Query: 177 RSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFG 236
           RSGFSKL+RWL+SF VFVI+YE IG +GSL+ILA GFL ST  V+ST S VSS R+ SF 
Sbjct: 178 RSGFSKLLRWLLSFGVFVISYERIGGLGSLLILASGFLCSTKTVNSTFSTVSSLRNYSFR 237

Query: 237 RTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEE 296
           R+  + +FTR +LKRL+TIVAIGLIVGM+V  LAG+IFFSYKI VEGKDAVIS+KSHVEE
Sbjct: 238 RSSITPFFTRGVLKRLKTIVAIGLIVGMIVGSLAGLIFFSYKIAVEGKDAVISLKSHVEE 297

Query: 297 SNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAP 356
           SNYAE+LG+K+WM+ENDVPGMVD+YTTTFYETVS+Q+DSLAMQYNMTEFVTGI+HFVI+P
Sbjct: 298 SNYAEKLGIKQWMDENDVPGMVDKYTTTFYETVSDQIDSLAMQYNMTEFVTGIRHFVISP 357

Query: 357 PAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKE 416
           PA +S+QS AL S SPYT+K++SLR +V  +EW +IYTE+DAIFREL+ TREDLV+KAK 
Sbjct: 358 PANTSQQSVALMSPSPYTEKMLSLRKKVRNQEWGEIYTELDAIFRELIFTREDLVEKAKG 417

Query: 417 FAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLIT 476
           +A QG+ VSQRVFA SASVLG  AKLMLS G  IISGAAEVFNFVSQ +IF WVLYYLIT
Sbjct: 418 YAVQGMEVSQRVFASSASVLGGGAKLMLSIGNSIISGAAEVFNFVSQSVIFFWVLYYLIT 477

Query: 477 SESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH 536
           SESGGVT QVMGMLPI KPARIRCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + IH
Sbjct: 478 SESGGVTNQVMGMLPIPKPARIRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLYDIH 537

Query: 537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQE 596
           FLY+ST LA  S LFPIFP  FATIPAAVQL++E RYI+A+SLS+IH+VL+DYG  EIQE
Sbjct: 538 FLYVSTILAIFSPLFPIFPPMFATIPAAVQLVMEGRYILAVSLSIIHIVLMDYGATEIQE 597

Query: 597 DIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNY 641
           DIPGY+ YLTGLSIIGGMTLFPSA+E  ++G LI     G  D Y
Sbjct: 598 DIPGYNEYLTGLSIIGGMTLFPSAIEGAIMGPLITTVVIGLKDLY 642

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297793067|ref|XP_002864418.1| hypothetical protein ARALYDRAFT_918735 [Arabidopsis lyrata subsp. lyrata] gi|297310253|gb|EFH40677.1| hypothetical protein ARALYDRAFT_918735 [Arabidopsis lyrata subsp. lyrata]

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/634 (68%), Positives = 516/634 (81%), Gaps = 13/634 (2%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
           MELVP+ D   K S  T   WQ+MFRSAS RKP    +S +       P     + ++ G
Sbjct: 1   MELVPY-DSETKSSIPTNLAWQEMFRSASSRKPQDPPSSSS-----SPPRKPSGDGSSSG 54

Query: 61  QKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQ 120
           + +  + D Q RLA+YIA+AHAGL F + +LYF+ KLLQ+Y+RPIQWAIL SIPLRGIQ+
Sbjct: 55  KTSLSTADSQARLAMYIAMAHAGLVFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQE 114

Query: 121 ALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR--- 177
            LV FWSEPL+LGLTE VLAVPV++F VF+G++VDIK + F+VFL++ K   P+ +R   
Sbjct: 115 TLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNLCFRVFLRRSK---PKRTRKKN 171

Query: 178 -SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFG 236
            +GFSKLVRWLVSF VFVIAYE IG +GSLVIL+LGFLFS+ NVDS++SAVSS RS SF 
Sbjct: 172 GTGFSKLVRWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSFR 231

Query: 237 RTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEE 296
           R+ F++YFTR I+KRL TIVAIGLIV M+V  L G+IFFSYKIGVEGKDAV S+KSHVEE
Sbjct: 232 RSHFTAYFTRGIMKRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEE 291

Query: 297 SNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAP 356
           SNYAE++G+K+WM+ENDVPGMVD YTT FYETVSEQ+DSLAMQYNMTE VTGIKHFVI  
Sbjct: 292 SNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGH 351

Query: 357 PAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKE 416
           P  +S  S AL + SPYT+KLMSLR RV  REW QIY+EVD IFREL+ITREDLV+KAK 
Sbjct: 352 PQNTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAKG 411

Query: 417 FAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLIT 476
           FA +G++VSQRVF+ SASV+G  AK + S G LIISGAAE FNF+SQLM+F+WVLY LIT
Sbjct: 412 FAVKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMVFIWVLYILIT 471

Query: 477 SESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH 536
           SESGGVTEQVM MLPI+  AR RCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + IH
Sbjct: 472 SESGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIH 531

Query: 537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQE 596
           FLYMST LAFISAL PIFP+WFATIPAA+QL+LE RYI+A++LSV HLVL++YG  EIQ+
Sbjct: 532 FLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIIAVTLSVTHLVLMEYGASEIQD 591

Query: 597 DIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           DIPG + Y+TGLSIIGG+TLFPSALE  ++G LI
Sbjct: 592 DIPGSNAYITGLSIIGGVTLFPSALEGAIMGPLI 625

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423808|ref|NP_568833.1| uncharacterized protein [Arabidopsis thaliana] gi|16648987|gb|AAL24345.1| Unknown protein [Arabidopsis thaliana] gi|28059051|gb|AAO29982.1| Unknown protein [Arabidopsis thaliana] gi|332009320|gb|AED96703.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/635 (69%), Positives = 516/635 (81%), Gaps = 15/635 (2%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
           MELVP+ D   K S  T   WQ+MFRSAS RKP      Q P   S + PP + +     
Sbjct: 1   MELVPY-DSETKSSIPTNLAWQEMFRSASSRKP------QDPPSSSSSSPPRKPSGDGSS 53

Query: 61  QKTTCSG-DPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQ 119
            KT+ S  D Q RLA+YIA+AHAGLAF + +LYF+ KLLQ+Y+RPIQWAIL SIPLRGIQ
Sbjct: 54  SKTSLSTVDSQARLAMYIAMAHAGLAFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQ 113

Query: 120 QALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR-- 177
           + LV FWSEPL+LGLTE VLAVPV++F VF+G++VDIK V F+VFL++ K   P+ +R  
Sbjct: 114 ETLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSK---PKRTRKK 170

Query: 178 --SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSF 235
             +GFSKLV+WLVSF VFVIAYE IG +GSLVIL+LGFLFS+ NVDS++SAVSS RS SF
Sbjct: 171 NDTGFSKLVKWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSF 230

Query: 236 GRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVE 295
            R+ F++YFTR I+ RL TIVAIGLIV M+V  L G+IFFSYKIGVEGKDAV S+KSHVE
Sbjct: 231 RRSHFTAYFTRGIMTRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVE 290

Query: 296 ESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIA 355
           ESNYAE++G+K+WM+ENDVPGMVD YTT FYETVSEQ+DSLAMQYNMTE VTGIKHFVI 
Sbjct: 291 ESNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIG 350

Query: 356 PPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAK 415
            P  +S  S AL + SPYT+KLMSLR RV  REW QIY+EVD IFREL+ITREDLV+KAK
Sbjct: 351 HPQNTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAK 410

Query: 416 EFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLI 475
            FA +G++VSQRVF+ SASV+G  AK + S G LIISGAAE FNF+SQLMIF+WVLY LI
Sbjct: 411 GFAVKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILI 470

Query: 476 TSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKI 535
           TSESGGVTEQVM MLPI+  AR RCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + I
Sbjct: 471 TSESGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNI 530

Query: 536 HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQ 595
           HFLYMST LAFISAL PIFP+WFATIPAA+QL+LE RYIVA+ LSV HLVL++YG  EIQ
Sbjct: 531 HFLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIVAVILSVTHLVLMEYGASEIQ 590

Query: 596 EDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           +DIPG + YLTGLSIIGG+TLFPSALE  ++G LI
Sbjct: 591 DDIPGSNAYLTGLSIIGGVTLFPSALEGAIMGPLI 625

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758216|dbj|BAB08661.1| unnamed protein product [Arabidopsis thaliana]

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/635 (69%), Positives = 515/635 (81%), Gaps = 15/635 (2%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
           MELVP+ D   K S  T   WQ+MFRSAS RKP      Q P   S + PP + +     
Sbjct: 1   MELVPY-DSETKSSIPTNLAWQEMFRSASSRKP------QDPPSSSSSSPPRKPSGDGSS 53

Query: 61  QKTTCSG-DPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQ 119
            KT+ S  D Q RLA+YIA+AHAGLAF + +LYF+ KLLQ+Y+RPIQWAIL SIPLRGIQ
Sbjct: 54  SKTSLSTVDSQARLAMYIAMAHAGLAFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQ 113

Query: 120 QALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR-- 177
           + LV FWSEPL+LGLTE VLAVPV++F VF+G++VDIK V F+VFL++ K   P+ +R  
Sbjct: 114 ETLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSK---PKRTRKK 170

Query: 178 --SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSF 235
             +GFSKLV+WLVSF VFVIAYE IG +GSLVIL+LGFLFS+ NVDS++SAVSS RS SF
Sbjct: 171 NDTGFSKLVKWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSF 230

Query: 236 GRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVE 295
            R+ F++YFTR I+ RL TIVAIGLIV M+V  L G+IFFSYKIGVEGKDAV S+KSHVE
Sbjct: 231 RRSHFTAYFTRGIMTRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVE 290

Query: 296 ESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIA 355
           ESNYAE++G+K+WM+ENDVPGMVD YTT FYETVSEQ+DSLAMQYNMTE VTGIKHFVI 
Sbjct: 291 ESNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIG 350

Query: 356 PPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAK 415
            P  +S  S AL + SPYT+KLMSLR RV  REW QIY+EVD IFREL+ITREDLV+KAK
Sbjct: 351 HPQNTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAK 410

Query: 416 EFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLI 475
            FA +G++VSQRVF+ SASV+G  AK + S G LIISGAAE FNF+SQLMIF+WVLY LI
Sbjct: 411 GFAVKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILI 470

Query: 476 TSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKI 535
           TSESGGVTEQVM MLPI+  AR RCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + I
Sbjct: 471 TSESGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNI 530

Query: 536 HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQ 595
           HFLYMST LAFISAL PIFP+WFATIPAA+QL+LE RYIVA+ LSV HLVL++YG  EIQ
Sbjct: 531 HFLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIVAVILSVTHLVLMEYGASEIQ 590

Query: 596 EDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           +DIPG + YLTGLSIIGG+TLFPSALE+  + D +
Sbjct: 591 DDIPGSNAYLTGLSIIGGVTLFPSALEVRKLKDWV 625

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463370|ref|XP_004149407.1| PREDICTED: uncharacterized protein LOC101216912 [Cucumis sativus]

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/634 (68%), Positives = 514/634 (81%), Gaps = 16/634 (2%)

Query: 1   MELVPFSD---DPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANST 57
           MELVP+SD   + +  S+S++PPWQDMFRS S+RKPS       P  +S   P S +NS+
Sbjct: 1   MELVPYSDPSSNSNSNSNSSSPPWQDMFRSGSVRKPSPD-----PQNQSSKLPQSDSNSS 55

Query: 58  APGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRG 117
                   SGDPQVRLALYIA+AHAGLAFT+  LY + ++L+ Y+RP+QWA+L SIPLRG
Sbjct: 56  -------FSGDPQVRLALYIAMAHAGLAFTILTLYAVGRILEAYLRPLQWAVLCSIPLRG 108

Query: 118 IQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR 177
           IQQ L  FWSEPLQLGLTET+LA+PVA+FKVFVGTLV  +EV F+V L++ K+   R ++
Sbjct: 109 IQQTLEGFWSEPLQLGLTETLLAIPVAVFKVFVGTLVQFREVCFRVVLRRKKSGHVRRNQ 168

Query: 178 SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGR 237
           S FSKL+RWLVSF +F++AYE  G +GS+ +L LGFLFS+ +VD T   VSSFRS SF R
Sbjct: 169 SVFSKLLRWLVSFWIFILAYENFGVIGSVSLLGLGFLFSSKSVDPTRYNVSSFRSLSFRR 228

Query: 238 TPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEES 297
           T  S++FT+ +LKRL+TIVAIGLIV M+VVFLAG +FFSYKIGVEGKDA+IS+K HVEES
Sbjct: 229 TAVSAFFTKGLLKRLKTIVAIGLIVAMIVVFLAGSVFFSYKIGVEGKDAMISLKLHVEES 288

Query: 298 NYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPP 357
           NYAER+GVKKWMEEND+PGM+D YT+ FYE V EQ+DS AMQYNMTEFVTGIKH  ++  
Sbjct: 289 NYAERIGVKKWMEENDLPGMIDSYTSQFYEAVLEQIDSYAMQYNMTEFVTGIKHLALSSS 348

Query: 358 -AGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKE 416
            A SS  S +L + SPYTQKLMSLRN V+ +EW QIYTE+DAI REL+ITREDLV+KAK 
Sbjct: 349 RANSSGASTSLITPSPYTQKLMSLRNSVSNKEWGQIYTELDAIIRELIITREDLVEKAKG 408

Query: 417 FAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLIT 476
            A QG+++SQRVFA S SVLG SAKLMLS G  IISGAAEVFNFVSQ M+F WVLYYLIT
Sbjct: 409 LAVQGMDISQRVFASSVSVLGGSAKLMLSIGRSIISGAAEVFNFVSQSMVFFWVLYYLIT 468

Query: 477 SESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH 536
           SESGGVTEQVM MLPI   ARIRCVEV+D+AISGVLLAT EIA +QGCLTWLL R F+IH
Sbjct: 469 SESGGVTEQVMHMLPIEDSARIRCVEVLDHAISGVLLATAEIAIYQGCLTWLLLRLFEIH 528

Query: 537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQE 596
           FLY+ST LAF+S LFPIFP WFATIPAA+QLLLE RY+VAI L++IHL L+DYG  EIQE
Sbjct: 529 FLYVSTVLAFLSPLFPIFPSWFATIPAALQLLLEGRYVVAICLAIIHLALMDYGISEIQE 588

Query: 597 DIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           DIPG+S YL GLSIIGGMTLF SALE  ++G LI
Sbjct: 589 DIPGHSEYLMGLSIIGGMTLFSSALEGAIMGPLI 622

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517707|ref|XP_004165886.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224576 [Cucumis sativus]

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/634 (68%), Positives = 512/634 (80%), Gaps = 16/634 (2%)

Query: 1   MELVPFSD---DPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANST 57
           MELVP+SD   + +  S+S++PPWQDMFRS S+RKPS       P  +S   P S +NS+
Sbjct: 1   MELVPYSDPSSNSNSNSNSSSPPWQDMFRSGSVRKPSPD-----PQNQSSKLPQSDSNSS 55

Query: 58  APGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRG 117
                   SGDPQVRLALYIA+AHAGLAFT+  LY + ++L+ Y+RP+QWA+L SIPLRG
Sbjct: 56  -------FSGDPQVRLALYIAMAHAGLAFTILTLYAVGRILEAYLRPLQWAVLCSIPLRG 108

Query: 118 IQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR 177
           IQQ L  FWSEPLQLGLTET+LA+PVA+ + FVGTLV  +EV F+V L++ K+   R ++
Sbjct: 109 IQQTLEGFWSEPLQLGLTETLLAIPVAVLRXFVGTLVQFREVCFRVVLRRKKSGHVRRNQ 168

Query: 178 SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGR 237
           S FSKL+RWLVSF +F++AYE  G +GS+ +L LGFLFS+ +VD T   VSSFRS SF R
Sbjct: 169 SVFSKLLRWLVSFWIFILAYENFGVIGSVSLLGLGFLFSSKSVDPTRYNVSSFRSLSFRR 228

Query: 238 TPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEES 297
           T  S++FT+ +LKRL+TIVAIGLIV M+VVFLAG +FFSYKIGVEGKDA+IS+K HVEES
Sbjct: 229 TAVSAFFTKGLLKRLKTIVAIGLIVAMIVVFLAGSVFFSYKIGVEGKDAMISLKLHVEES 288

Query: 298 NYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPP 357
           NYAER+GVKKWMEEND+PGM+D YT+ FYE V EQ+DS AMQYNMTEFVTGIKH  ++  
Sbjct: 289 NYAERIGVKKWMEENDLPGMIDSYTSQFYEAVLEQIDSYAMQYNMTEFVTGIKHLALSSS 348

Query: 358 -AGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKE 416
            A SS  S +L + SPYTQKLMSLRN V+ +EW QIYTE+DAI REL+ITREDLV+KAK 
Sbjct: 349 RANSSGASTSLITPSPYTQKLMSLRNSVSNKEWGQIYTELDAIIRELIITREDLVEKAKG 408

Query: 417 FAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLIT 476
            A QG+++SQRVFA S SVLG SAKLMLS G  IISGAAEVFNFVSQ M+F WVLYYLIT
Sbjct: 409 LAVQGMDISQRVFASSVSVLGGSAKLMLSIGRSIISGAAEVFNFVSQSMVFFWVLYYLIT 468

Query: 477 SESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH 536
           SESGGVTEQVM MLPI   ARIRCVEV+D+AISGVLLAT EIA +QGCLTWLL R F+IH
Sbjct: 469 SESGGVTEQVMHMLPIEDSARIRCVEVLDHAISGVLLATAEIAIYQGCLTWLLLRLFEIH 528

Query: 537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQE 596
           FLY+ST LAF+S LFPIFP WFATIPAA+QLLLE RY+VAI L++IHL L+DYG  EIQE
Sbjct: 529 FLYVSTVLAFLSPLFPIFPSWFATIPAALQLLLEGRYVVAICLAIIHLALMDYGISEIQE 588

Query: 597 DIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
           DIPG+S YL GLSIIGGMTLF SALE  ++G LI
Sbjct: 589 DIPGHSEYLMGLSIIGGMTLFSSALEGAIMGPLI 622

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494329|ref|XP_002267547.2| PREDICTED: uncharacterized protein LOC100265288 [Vitis vinifera]

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/651 (67%), Positives = 510/651 (78%), Gaps = 4/651 (0%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKP--SATSNSQAPLPESHAPPPSQANSTA 58
           MELVP+SD       ST P WQDMFRSASIRKP  S  +++  P   +  P P    + +
Sbjct: 1   MELVPYSDPNSSSDPSTLP-WQDMFRSASIRKPDPSPQNHAPPPPAHASPPAPPPDPAAS 59

Query: 59  PGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGI 118
              + + +GD QVRLA+YIA+AHAGLA T+FILY + KLL+ Y+RPIQWA+L SIPLRGI
Sbjct: 60  SPDQRSLTGDSQVRLAIYIAMAHAGLALTIFILYAVGKLLEAYLRPIQWAVLCSIPLRGI 119

Query: 119 QQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRS 178
           QQ LV FWSEPL LGLTETVLAVPVAIF+VFVGTLV+I++V  +V   K K    R +RS
Sbjct: 120 QQTLVGFWSEPLSLGLTETVLAVPVAIFRVFVGTLVEIRDVCLRVLRGKPKTEELRRNRS 179

Query: 179 GFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRT 238
           GFSKLVRWLVSF +FVI YE+IG VGS  +L L  +F + NVDSTMS VSS RS SF R+
Sbjct: 180 GFSKLVRWLVSFWLFVILYESIGGVGSFTLLGLCLMFGSRNVDSTMSKVSSLRSVSFRRS 239

Query: 239 PFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESN 298
             S++FTR ILK+L+TIVAIGLI GM+V FL GI+FFSYKIGVEGKDAVIS+KSHVEESN
Sbjct: 240 EISAFFTRGILKKLKTIVAIGLIFGMIVGFLVGIMFFSYKIGVEGKDAVISVKSHVEESN 299

Query: 299 YAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIA-PP 357
           YAER+GVKKWME+NDV GMVDRY+  FYETV EQ+D LAMQYNMTEFV GIKHFV+  PP
Sbjct: 300 YAERIGVKKWMEDNDVTGMVDRYSNKFYETVWEQIDGLAMQYNMTEFVVGIKHFVVTQPP 359

Query: 358 AGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEF 417
           A SSEQS AL + SPY +K +SLRNRV+K+EW QIYTE+DAIFREL+ITR DL +KAK F
Sbjct: 360 ANSSEQSTALVAPSPYAEKFLSLRNRVSKKEWGQIYTELDAIFRELLITRADLAEKAKGF 419

Query: 418 AYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITS 477
           A QG++V+QR+F    SVLG   K M+S G  IISGAAEVFNFVSQ  +F WVLYYLITS
Sbjct: 420 AVQGMDVAQRLFDSYKSVLGGGMKFMVSIGESIISGAAEVFNFVSQSAVFFWVLYYLITS 479

Query: 478 ESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHF 537
           ESGGVTEQ M ++P+ K  R RCV V+DNAISGVLLAT EIAFFQGCLTWLLFR + IHF
Sbjct: 480 ESGGVTEQAMSLIPMPKLYRDRCVAVLDNAISGVLLATAEIAFFQGCLTWLLFRLYSIHF 539

Query: 538 LYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQED 597
           LYMST LA IS L PIFP W ATIPA +QL+LESRYI+AI+LSVIHL L++YG  EIQED
Sbjct: 540 LYMSTILAIISPLLPIFPSWVATIPATIQLVLESRYILAITLSVIHLALMEYGASEIQED 599

Query: 598 IPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCTKG 648
           IPGYS YLTGLSIIGGMTLFPSALE  ++G LI     G  + Y+     G
Sbjct: 600 IPGYSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIGLKELYTEFVLDG 650

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297788190|ref|XP_002862244.1| hypothetical protein ARALYDRAFT_921013 [Arabidopsis lyrata subsp. lyrata] gi|297307548|gb|EFH38502.1| hypothetical protein ARALYDRAFT_921013 [Arabidopsis lyrata subsp. lyrata]

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/632 (67%), Positives = 503/632 (79%), Gaps = 28/632 (4%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPG 60
           MELVP+ D   K S  T   WQ+MFRSAS RKP    +S +       P     + ++ G
Sbjct: 1   MELVPY-DSETKSSIPTNLAWQEMFRSASSRKPQDPPSSSS-----SPPRKPSGDGSSSG 54

Query: 61  QKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQ 120
           + +  + D Q RLA+YIA+AHAGL F + +LYF+ KLLQ+Y+RPIQWAIL SIPLRGIQ+
Sbjct: 55  KTSLSTADSQARLAMYIAMAHAGLVFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQE 114

Query: 121 ALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSR--- 177
            LV FWSEPL+LGLTE VLAVPV++F VF+G++VDIK + F+VFL++ K   P+ +R   
Sbjct: 115 TLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNLCFRVFLRRSK---PKRTRKKN 171

Query: 178 -SGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFG 236
            +GFSKLVRWLVSF VFVIAYE IG +GSLVIL+LGFLFS+ NVDS++SAVSS R     
Sbjct: 172 GTGFSKLVRWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLR----- 226

Query: 237 RTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEE 296
                     RI+KRL TIVAIGLIV M+V  L G+IFFSYKIGVEGKDAV S+KSHVEE
Sbjct: 227 ----------RIMKRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEE 276

Query: 297 SNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAP 356
           SNYAE++G+K+WM+ENDVPGMVD YTT FYETVSEQ+DSLAMQYNMTE VTGIKHFVI  
Sbjct: 277 SNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGH 336

Query: 357 PAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKE 416
           P  +S  S AL + SPYT+KLMSLR RV  REW QIY+EVD IFREL+ITREDLV+KAK 
Sbjct: 337 PQNTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAKG 396

Query: 417 FAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLIT 476
           FA +G++VSQRVF+ SASV+G  AK + S G LIISGAAE FNF+SQLM+F+WVLY LIT
Sbjct: 397 FAVKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMVFIWVLYILIT 456

Query: 477 SESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH 536
           SESGGVTEQVM MLPI+  AR RCVEV+D AISGVLLAT EIAFFQGCLTWLLFR + IH
Sbjct: 457 SESGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIH 516

Query: 537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQE 596
           FLYMST LAFISAL PIFP+WFATIPAA+QL+LE RYI+A++LSV HLVL++YG  EIQ+
Sbjct: 517 FLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIIAVTLSVTHLVLMEYGASEIQD 576

Query: 597 DIPGYSPYLTGLSIIGGMTLFPSALELLVIGD 628
           DIPG + Y+TGLSIIGG+TLFPSALE+  + D
Sbjct: 577 DIPGSNAYITGLSIIGGVTLFPSALEVRKLND 608

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566382|ref|XP_003551411.1| PREDICTED: uncharacterized protein LOC100775952 [Glycine max]

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/657 (67%), Positives = 506/657 (77%), Gaps = 27/657 (4%)

Query: 1   MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQAN----- 55
           MELVP+SD      SSTTP WQDMFRSAS R PS+T       P  HAPP          
Sbjct: 1   MELVPYSD-----PSSTTPAWQDMFRSASARHPSST-------PPPHAPPSQSHAPSPSP 48

Query: 56  --------STAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQW 107
                      P  K T SGDPQVRLALYIA+AHAGLAF +FILY   KLL+ Y+RP+QW
Sbjct: 49  HAPPNPPSDADPDGKNTFSGDPQVRLALYIAMAHAGLAFAIFILYTFSKLLEQYLRPLQW 108

Query: 108 AILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKK 167
           A+L SIPLRGIQQ LV FWSEPL+LGLTETVLAVPVA+F+ FVGTLV+I+E  F+V L+K
Sbjct: 109 AVLCSIPLRGIQQTLVKFWSEPLRLGLTETVLAVPVAVFRAFVGTLVEIREASFRVILRK 168

Query: 168 LK--NNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMS 225
            K   N P   RSGFSKL+R LVSF +F IAYE +G  G+L +L LGFLFS+ NVDSTM 
Sbjct: 169 PKPQQNRPSRKRSGFSKLLRLLVSFGIFTIAYERLGGFGALSLLGLGFLFSSNNVDSTMH 228

Query: 226 AVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKD 285
            +SS+RS SF R+  S++FTR IL++L+ IVAIGLIV M+V FL+G+IFFSYKIGVEGKD
Sbjct: 229 TLSSYRSLSFRRSAISAFFTRGILRKLKIIVAIGLIVCMIVGFLSGVIFFSYKIGVEGKD 288

Query: 286 AVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEF 345
           AVIS+K HVEE+NYAER+GVKKWM+ENDV GMVD YTT  YETVS+Q+D LA+QYNMTEF
Sbjct: 289 AVISLKLHVEENNYAERIGVKKWMDENDVAGMVDSYTTKIYETVSDQIDGLALQYNMTEF 348

Query: 346 VTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVI 405
           VTGIKHFVI+ P   S  SK L + SPY +K +SL+ RV  REW QIY EVD+I RELVI
Sbjct: 349 VTGIKHFVISNPVNYSAPSKVLMTPSPYAEKFLSLKTRVRNREWSQIYAEVDSILRELVI 408

Query: 406 TREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLM 465
           TREDLV+KAK FA++G++VSQR+F  S +VLGSS K M S    IISGAAEVFNFVSQ M
Sbjct: 409 TREDLVEKAKGFAFKGMDVSQRIFTSSRTVLGSSTKFMFSIANSIISGAAEVFNFVSQSM 468

Query: 466 IFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCL 525
           +F+WVLYYLITSESGGVTEQVM MLPIS   R RCVEV+D AISGVLLAT EIAFFQGCL
Sbjct: 469 VFIWVLYYLITSESGGVTEQVMCMLPISNSTRDRCVEVLDKAISGVLLATAEIAFFQGCL 528

Query: 526 TWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLV 585
           TWLLFR  KIHFLYMST LAFIS L PIFP W ATIPAA+QL+LE RYI+AI LS+IHL 
Sbjct: 529 TWLLFRLNKIHFLYMSTVLAFISPLLPIFPSWLATIPAALQLVLEGRYIMAIVLSIIHLF 588

Query: 586 LLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYS 642
           L+DYG  EI ED+PG S YLTGLSIIGGMTLFPSALE  ++G LI        D Y+
Sbjct: 589 LMDYGASEILEDVPGNSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVMIALKDLYA 645

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	651
COG0628	355	COG0628, yhhT, Predicted permease, member of the P	2e-06
pfam01594	327	pfam01594, UPF0118, Domain of unknown function DUF	2e-05

>gnl|CDD|223701 COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]

 Score = 49.9 bits (120), Expect = 2e-06
 Identities = 32/165 (19%), Positives = 76/165 (46%), Gaps = 2/165 (1%)

Query: 423 NVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGV 482
            + +R+     ++L +   ++ S    ++S  + + + +  L++ L +L++L+  +   +
Sbjct: 120 LLGERLPVSVDALLSALLSILQSILGSLLSLLSSLLSLIVSLLLVLVLLFFLL-LDGERL 178

Query: 483 TEQVMGMLPISKPARIRCV-EVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMS 541
             +++ +LP     R R +   ++  +SG L   V +A   G LT +      + +  + 
Sbjct: 179 RRKLIKLLPRKLRKRARRILSEVNATLSGYLRGQVLVALIVGILTGIGLLILGVPYALLL 238

Query: 542 TTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVL 586
             LA + +L P        IPA +  LL+     A+ + ++ LV+
Sbjct: 239 GLLAGLLSLIPYIGPVIGLIPAVIIALLQGGPWGALLVLIVFLVI 283

Length = 355

>gnl|CDD|216594 pfam01594, UPF0118, Domain of unknown function DUF20

 Score = 46.4 bits (111), Expect = 2e-05
 Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 450 IISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIR-CVEVIDNAI 508
           ++S  A +   + QL++ L + ++ +      + + ++  LP     R+   +  I++ +
Sbjct: 133 LLSLLASLPGLLLQLILVLVLTFFFLLDGER-LRQGIISFLPKRYRERVDAILREINDTL 191

Query: 509 SGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLL 568
            G LL  V +A   G LT++      + +  +   L  ++ L P        IP A+  L
Sbjct: 192 GGYLLGQVIVALIIGVLTFIGLLILGVPYALLLALLVGLANLIPYIGPVIILIPIAIYAL 251

Query: 569 L 569
           L
Sbjct: 252 L 252

This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution. Length = 327

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	651
KOG2365	808	consensus Uncharacterized membrane protein [Functi	100.0
PRK10983	368	putative inner membrane protein; Provisional	99.96
PF01594	327	UPF0118: Domain of unknown function DUF20; InterPr	99.96
TIGR02872	341	spore_ytvI sporulation integral membrane protein Y	99.95
COG0628	355	yhhT Predicted permease, member of the PurR regulo	99.95
PRK12287	344	tqsA pheromone autoinducer 2 transporter; Reviewed	99.91
KOG2365	808	consensus Uncharacterized membrane protein [Functi	98.06
PF01594	327	UPF0118: Domain of unknown function DUF20; InterPr	89.99
PF04306	140	DUF456: Protein of unknown function (DUF456); Inte	82.9
COG0628	355	yhhT Predicted permease, member of the PurR regulo	81.85
PF10136	643	SpecificRecomb: Site-specific recombinase; InterPr	81.08

>KOG2365 consensus Uncharacterized membrane protein [Function unknown]

Probab=100.00  E-value=1.1e-104  Score=860.40  Aligned_cols=621  Identities=48%  Similarity=0.743  Sum_probs=558.1

Q ss_pred             CCcCCCCCCCCCCCCCCCCchhHhhhhhccCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCcc-ccCCc
Q 006309            1 MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLP----------ESHAPPPSQANSTAPGQKTT-CSGDP   69 (651)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~   69 (651)
                      |||+||. ++.++..+..+.|++||||++.|+|..-     |.-          ++-++||.++..-+.++.+. +..|.
T Consensus        64 t~L~Pfk-s~~~~~~~hwL~~l~~~~s~~~~~~~~l-----P~~~~s~isEkiyttfasp~r~~~~~g~~~l~~Ls~~~s  137 (808)
T KOG2365|consen   64 TELVPFK-SETKSSIPHWLAWLEMFRSASSRKPQDL-----PSSSSSSISEKIYTTFASPPRKPSGDGSSSLTSLSTVDS  137 (808)
T ss_pred             ceeecch-hhhhhhhHHHHHHHHHhcchhhhccccC-----CcccchhHHHHHhhhhcCCCCCeeeecccceeeeeechh
Confidence            6899999 8999999999999999999999999872     222          22223444443334444555 78899


Q ss_pred             chHHHHHHHHHhhHHHHHHHHH--HHHHHHHHhhhhhHH--HHHH----h---hcchhhHHHHHHHhcccccccchhhhh
Q 006309           70 QVRLALYIALAHAGLAFTLFIL--YFIFKLLQDYIRPIQ--WAIL----L---SIPLRGIQQALVAFWSEPLQLGLTETV  138 (651)
Q Consensus        70 ~~~~~~~~~m~h~gl~~~~~~l--~~~~~ll~~~~r~~q--wa~l----~---s~~lr~~q~~lv~~~~~~l~~g~~~~~  138 (651)
                      |+|++.|+||||+|++.+|+++  |.+++|+++|+||+|  |+++    |   |+|++.+|.++++||..|+|.|.++.+
T Consensus       138 ~~~~~~~~~~a~~~l~~~i~~far~wV~~L~~~Y~~~i~yvwn~~nkkl~RsfSiP~wii~~~~~~~~~gplR~gvf~Vv  217 (808)
T KOG2365|consen  138 QARLAMYIAMAHAGLAFAICVFARYWVGKLLQEYLRPIQYVWNILNKKLCRSFSIPLWIIQETLVDFWSGPLRLGVFEVV  217 (808)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhchhhhhHHhhcCccHHHHHHHHHHHhccchhcchhhhh
Confidence            9999999999999999999999  999999999999999  9999    9   999999999999999999999999999


Q ss_pred             hhchhhhhhhhcchhhhh--------HHHHHHHHHhh------ccC---CCCCC-CCchhhHHHH-----------HHHH
Q 006309          139 LAVPVAIFKVFVGTLVDI--------KEVFFKVFLKK------LKN---NGPRH-SRSGFSKLVR-----------WLVS  189 (651)
Q Consensus       139 ~~~~~~~~~~~~~~~~d~--------~~~~~~~~~~~------~~~---~~~~~-~~~~~~~~~~-----------wl~~  189 (651)
                      +|+|..++..+.|+..|.        ...++|..+|+      |+|   ++.|+ ..-||+|++.           |+++
T Consensus       218 ~av~~~~~~~~ig~~~~seellekenss~~~~~s~~pPnvekv~~pakek~t~~~~~lg~~~l~~tstvdeaiTgDwl~~  297 (808)
T KOG2365|consen  218 LAVPVSVFNVFIGSIVDSEELLEKENSSVCFRVSLRPPNVEKVSKPAKEKRTRKKNDLGFSKLVKTSTVDEAITGDWLVS  297 (808)
T ss_pred             hhHhhHHHHhhhcCcCcHHHHHhhhccccccccccCCCCcccCCCCCCcCCCCCCcccccccccccchhhhhccCcEEEe
Confidence            999999999999999999        44567888888      455   22222 5679999999           9999


Q ss_pred             HHHHHHHHHhhh-hhhhHHHHHHHHHhhccccccccccccccccc----------CcCC------------------CCc
Q 006309          190 FAVFVIAYETIG-AVGSLVILALGFLFSTTNVDSTMSAVSSFRSK----------SFGR------------------TPF  240 (651)
Q Consensus       190 ~~~f~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~------------------~~~  240 (651)
                      |+||+++|+++| ..+++.++.++|+++.+++++..+++++.|.+          ++++                  +++
T Consensus       298 ~~v~~ia~~~I~r~~g~l~LL~~pf~~~~~~~~~~~~gV~~~~~nfldstWqkmssf~~~~~~a~~~~pi~~~~k~L~~i  377 (808)
T KOG2365|consen  298 FGVFVIAYERIGRGIGSLVLLSLPFLFSSKNVDSSLSGVSSLRSNFLDSTWQKMSSFRRSHFTAYFTRPIMTRLKTLVAI  377 (808)
T ss_pred             ehHHHHHHHHHHcccceEEEeecchheehhhhHHHHHhHHHHHHhhhhhhHHhhhHHHHhheeeeecccHHHHHHHHHhh
Confidence            999999999999 89999999999999999999999999988877          3333                  348


Q ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHhhhccccccccccchhhhhhcccCCcchhhhh
Q 006309          241 SSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDR  320 (651)
Q Consensus       241 ~~~~~~~L~~~ld~vvSi~lIl~liv~~l~~svFl~~qi~~E~~~avi~l~s~v~n~t~~~~pel~~WLpendv~~~vds  320 (651)
                      |+++-++|++++|++.|+++|+++.+|+.+...|+++|+|+|.+|. +++++|++|++-.++||+.+|.||.        
T Consensus       378 d~~v~~~lhd~~Dvl~S~~I~fll~ig~~~~~~~~~~k~H~E~vh~-~e~tsn~~n~~~~~~p~~~d~~~~~--------  448 (808)
T KOG2365|consen  378 DLIVLMILHDGSDVLLSGVIFFLLKIGVEGKDAVYSLKSHVEEVHY-AEKTSNKQNMDENDVPGMVDMYTTK--------  448 (808)
T ss_pred             chhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH-HHHhhhhccCCcccchhHhhhhhHH--------
Confidence            9999999999999999999999999999999999999999999995 7999999999999999988888875        


Q ss_pred             HHHHHHHHHHHHHHhhhhhhceeeeecccccccccCCCCCcccchh---hc--ccchhhHhhhhhccccchhhhhhHHHH
Q 006309          321 YTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKA---LT--SLSPYTQKLMSLRNRVTKREWKQIYTE  395 (651)
Q Consensus       321 ~~~~~Y~~v~e~id~la~qyn~te~~~~v~~~~~~~~~~~~~~~~~---l~--~~~~~~~~l~~~~~~~~~~~w~~~~~~  395 (651)
                         +.||.+.|++|++||||||||+.+++||++.+++.|++..++|   +|  .||.|.+++.++   +.+++|+++|.+
T Consensus       449 ---~e~~~~~~~~~~~ayqygrtwl~~~i~~~~~~k~~na~~~e~qvl~~~d~ly~~w~~~n~~f---v~~~~~~~~~v~  522 (808)
T KOG2365|consen  449 ---FEYETVSEQIDSLAYQYGRTWLVTGIKHFVIGKPQNATSTESQVLITPDPLYEKWMSLNTRF---VKNREWSQIYVE  522 (808)
T ss_pred             ---HHHHHHHHHHHHHHHHhhhHHHHhhhHHHhcCCCCccccchHhHhhcccHHHHHHHHhccch---hhccccceeeeE
Confidence               2388899999999999999999999999999988885555554   44  356666554443   689999999999


Q ss_pred             HHHHHHHhhhcHHHHHHHHHHHhhhhhhhHHHHHhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006309          396 VDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLI  475 (651)
Q Consensus       396 vd~~~~~~~~~~~~l~~~~k~~~~~~~~v~~sI~~S~~svl~~~~sll~s~~s~ils~g~~v~nfli~liIfl~~LFYLL  475 (651)
                      .+-.+++.+++++|+++++|||+.++|+|+||++.+..+.+++.+++++|++++++++|++++||+++++||++++||++
T Consensus       523 ~q~~~~~di~~~~dlv~~vken~~t~m~I~qsv~~~~a~nVs~~~~~v~sL~~Ii~s~g~~llNfi~~liIFLt~lyyLL  602 (808)
T KOG2365|consen  523 VQVIFREDIITREDLVEKVKENAVTGMDISQSVFSSSASNVSGGAKFVFSLGNIIISGGAELLNFISQLIIFLTVLYYLL  602 (808)
T ss_pred             eeehhhHhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998888888999999999999999999999999999999999999999


Q ss_pred             hcCcch--HHHHHH--hhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHhhc
Q 006309          476 TSESGG--VTEQVM--GMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALF  551 (651)
Q Consensus       476 sd~~~~--l~~~v~--~llP~~~~~~~rl~~~i~~aI~gV~~g~l~iAl~qGilT~Igf~IfGvp~a~llg~LaailslI  551 (651)
                      ++++++  .++++.  +++|.....++++.+.++.+|+|||.+++|||.|||++||+.|++||++++|+++++|++++.+
T Consensus       603 Sss~~~~~plqWa~~l~~l~~~~~Ssn~i~~~~e~AI~GVf~aSakmA~FyGlyTwl~h~lf~inivf~pS~lA~I~aa~  682 (808)
T KOG2365|consen  603 SSSSGGVTPLQWAQVLNMLPINASSSNRIVEVLELAISGVFLASAKMAFFYGLYTWLLHRLFNINIVFMPSVLAFISAAL  682 (808)
T ss_pred             cccCCCeeehhhhhhcccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceEEeehhHHHHHHhhC
Confidence            997665  445554  5667666788999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHH-HhcchhHHHHHHHHHHhhhhccccccccCCCCCChHHHHHHHHHhhccccccccchhhHHHH
Q 006309          552 PIFPFWFATIPAAVQLL-LESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI  630 (651)
Q Consensus       552 Pi~Gt~iV~IPaal~Ll-~qG~~~~AI~L~i~~~l~~~~idn~I~~~i~GiHP~Lt~LsIiGGl~~F~~Gl~GlIlGPLI  630 (651)
                      |++|+|++.||+++.++ ++|+..+|+++.+.|++++.+.|..||.+++|.|||+|+|||+||+|++  |++|+|+||++
T Consensus       683 Pi~p~y~aaIpa~l~LwLv~G~g~~Avil~V~hl~p~~f~ds~iy~dI~GshpYlTGLAIiGG~y~l--gl~gaiiGpii  760 (808)
T KOG2365|consen  683 PIFPYYFAAIPAALQLWLVEGRGIVAVILSVTHLVPMEFGDSEIYDDIPGSHPYLTGLAIIGGVYLL--GLVGAIIGPII  760 (808)
T ss_pred             cccchHHHHHHHHHHHHhhcCcchhhHHHHHHHhhHHHhhhhhhhhcCCCCCcceeeehhhccchhh--hhhhhhhhhhH
Confidence            99999999999999996 5999999999999999999999999999999999999999999999999  99999999999


Q ss_pred             HHHHHHHHHhhhcc
Q 006309          631 AGSNYGPTDNYSCH  644 (651)
Q Consensus       631 l~ll~~L~~iy~~~  644 (651)
                      +|+++++.++|-.+
T Consensus       761 lc~~~v~snIyl~~  774 (808)
T KOG2365|consen  761 LCFVMVFSNIYLLQ  774 (808)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999776

>PRK10983 putative inner membrane protein; Provisional

Probab=99.96  E-value=2.8e-26  Score=245.96  Aligned_cols=185  Identities=18%  Similarity=0.156  Sum_probs=162.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhh-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006309          455 AEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGM-LPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFF  533 (651)
Q Consensus       455 ~~v~nfli~liIfl~~LFYLLsd~~~~l~~~v~~l-lP~~~~~~~rl~~~i~~aI~gV~~g~l~iAl~qGilT~Igf~If  533 (651)
                      .++.+++++++++++.+||++.|+ +++.+++.++ .|..++..+++.+.+.+++++++.|++.+|++||++++++|+++
T Consensus       158 ~~~~~~~~~l~l~l~~~ff~l~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~~l~a~i~gvl~~ig~~i~  236 (368)
T PRK10983        158 AHIGRFMMHCALMLLFSALLYWRG-EQVALGIRHFATRLAGKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAIS  236 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334567778888888999999995 8888888876 46666667788999999999999999999999999999999999


Q ss_pred             cCChhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhccccccccCC----CCCChHHHHHH
Q 006309          534 KIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDI----PGYSPYLTGLS  609 (651)
Q Consensus       534 Gvp~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~~l~~~~idn~I~~~i----~GiHP~Lt~Ls  609 (651)
                      |+|++.++|+++++.++ |.+||+++|+|++++++.+|+...++.+++++. +.+.+||.++|.+    .++||.+++++
T Consensus       237 gvp~a~llg~l~~~~~i-~~~G~~~~~ip~~~~~~~~g~~~~~~~~~~~~~-vv~~idnil~P~l~g~~~~l~~~~il~~  314 (368)
T PRK10983        237 GVPYATLLTVLMILSCL-VQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSC-VVGTLDNVIRPMLIRMGADLPMILILSG  314 (368)
T ss_pred             cCCHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhCChHHHHHHHHHHH-HHHHhhheeeeeeecCCCCCCHHHHHHH
Confidence            99999999999988876 789999999999999999999888888777764 4566677777655    45899999999


Q ss_pred             HHHhhccccccccchhhHHHHHHHHHHHHHhhhcc
Q 006309          610 IIGGMTLFPSALELLVIGDLIAGSNYGPTDNYSCH  644 (651)
Q Consensus       610 IiGGl~~F~~Gl~GlIlGPLIl~ll~~L~~iy~~~  644 (651)
                      ++||..+|  |+.|+++||+++++++++++.|+++
T Consensus       315 ~~~G~~~f--G~~G~~lgp~i~a~~~~l~~~~~~~  347 (368)
T PRK10983        315 VIGGLIAF--GMIGLFIGPVVLAVSYRLFSAWVHE  347 (368)
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999  9999999999999999999999865

>PF01594 UPF0118: Domain of unknown function DUF20; InterPro: IPR002549 This is a family of hypothetical proteins

Probab=99.96  E-value=3.3e-27  Score=244.66  Aligned_cols=192  Identities=24%  Similarity=0.352  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006309          448 YLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISK-PARIRCVEVIDNAISGVLLATVEIAFFQGCLT  526 (651)
Q Consensus       448 s~ils~g~~v~nfli~liIfl~~LFYLLsd~~~~l~~~v~~llP~~~-~~~~rl~~~i~~aI~gV~~g~l~iAl~qGilT  526 (651)
                      +.+.+...++++++.+++++++.+||++.|+ +++.+++.+.+|.+. +..+++.+++++.+++++.+|+.+++++|+.+
T Consensus       131 ~~~~~~~~~~~~~l~~~~i~l~~~~~~l~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  209 (327)
T PF01594_consen  131 SSLSSFISSIFSFLFNFFIFLIFLFFFLLDG-EKLRRFLIRLLPPRNRERFEEILRKIDQSLSAYLKGQLILALIQGVLT  209 (327)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445556667888899999999999999995 899999999999884 35577999999999999999999999999999


Q ss_pred             HHHHHHhcCChhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHHHhh----hhccccccccCCCCCC
Q 006309          527 WLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVL----LDYGTCEIQEDIPGYS  602 (651)
Q Consensus       527 ~Igf~IfGvp~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~~l~----~~~idn~I~~~i~GiH  602 (651)
                      +++|+++|+|+++++|++++++++||++|+.++++|++++.+.+|+...++..++...+.    .++++|++.++..++|
T Consensus       210 ~i~~~~~gi~~~~l~~~l~~i~~~IP~iG~~i~~ip~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~il~P~i~g~~~~i~  289 (327)
T PF01594_consen  210 FIGFSIFGIPYALLLGVLAFILSFIPYIGPIIVLIPAAIYALLQGGPWAALIVLIVFIVIQQLEDNILRPKIMGRSLGIH  289 (327)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcccccchhhhcccCCC
Confidence            999999999999999999999999999999999999999999999966677666555444    4555556666667799


Q ss_pred             hHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHhhh
Q 006309          603 PYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTDNYS  642 (651)
Q Consensus       603 P~Lt~LsIiGGl~~F~~Gl~GlIlGPLIl~ll~~L~~iy~  642 (651)
                      |+++++++++|..+|  |+.|+++||+++++...++|.||
T Consensus       290 p~~~l~~~~~g~~~f--G~~G~il~~pi~~~~~~~~~~~~  327 (327)
T PF01594_consen  290 PLLILLAVIIGGYLF--GFIGLILAPPILAVIKAIFEEYR  327 (327)
T ss_pred             HHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999  99999999999999999999996

A number of the sequence records state they are transmembrane proteins or putative permeases. It is not clear what source suggested that these proteins might be permeases and this information should be treated with caution.

>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI

Probab=99.95  E-value=4.4e-26  Score=236.87  Aligned_cols=192  Identities=18%  Similarity=0.230  Sum_probs=165.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006309          445 STGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPAR-IRCVEVIDNAISGVLLATVEIAFFQG  523 (651)
Q Consensus       445 s~~s~ils~g~~v~nfli~liIfl~~LFYLLsd~~~~l~~~v~~llP~~~~~~-~rl~~~i~~aI~gV~~g~l~iAl~qG  523 (651)
                      ++.+.+.+...++.+++++++++++.+||++.|+ +++.+++.++.|.+++.+ .++.+++++.++++++|++.+|+++|
T Consensus       142 ~~~~~l~~~~~~~~~~~~~~~~~~i~~ff~l~d~-~~~~~~~~~l~p~~~~~~~~~i~~~i~~~~~~y~~~~~~~~~i~g  220 (341)
T TIGR02872       142 NLITSIPSFIASIPNFLIVLLFTLIATFFISKDL-PRLKSKLFSILPERTSQKLKNIFSELKKAAFGFLKAQLILVLITF  220 (341)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334444555566788888888889999999995 889999999999776544 56899999999999999999999999


Q ss_pred             HHHHHHHHHhcCChhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHHHh---hhhccccccccCCCC
Q 006309          524 CLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLV---LLDYGTCEIQEDIPG  600 (651)
Q Consensus       524 ilT~Igf~IfGvp~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~~l---~~~~idn~I~~~i~G  600 (651)
                      +.++++++++|+|+++++|++++++++||++||+++++|++++.+.+|++..++.+.+++.+   ..++++|++.++..+
T Consensus       221 ~~~~i~~~~~gvp~a~~~~~l~~~~~~IP~vG~~i~~ip~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~P~i~g~~~~  300 (341)
T TIGR02872       221 VIVLIGLLIIGVDYALTLALIIGIVDILPILGPGAVLVPWALYLFITGNYAMGIGLLILYLVVLILRQILEPKVVSSSIG  300 (341)
T ss_pred             HHHHHHHHHHcCchHHHHHHHHHHHHhhhhcCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhHhhHHhhccCC
Confidence            99999999999999999999999999999999999999999999999988777766555543   345566666677778


Q ss_pred             CChHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHH
Q 006309          601 YSPYLTGLSIIGGMTLFPSALELLVIGDLIAGSNYGPTD  639 (651)
Q Consensus       601 iHP~Lt~LsIiGGl~~F~~Gl~GlIlGPLIl~ll~~L~~  639 (651)
                      +||.++++|+++|...|  |+.|+++||++++++.++++
T Consensus       301 l~p~~vl~~~l~g~~~~--G~~G~~l~~~~~~~~~~~~~  337 (341)
T TIGR02872       301 LHPLATLISMYIGLKLF--GFLGLIFGPVIVVLFKALIE  337 (341)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999  99999999999999776654

Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E. Second, mutation leads to a sporulation defect. Third, it if found in exactly those genomes whose bacteria are capable of sporulation, except for being absent in Clostridium acetobutylicum ATCC824. This protein has extensive hydrophobic regions and is likely an integral membrane protein.

>COG0628 yhhT Predicted permease, member of the PurR regulon [General function prediction only]

Probab=99.95  E-value=2.9e-26  Score=243.02  Aligned_cols=187  Identities=20%  Similarity=0.304  Sum_probs=162.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 006309          457 VFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPAR-IRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKI  535 (651)
Q Consensus       457 v~nfli~liIfl~~LFYLLsd~~~~l~~~v~~llP~~~~~~-~rl~~~i~~aI~gV~~g~l~iAl~qGilT~Igf~IfGv  535 (651)
                      +.+.+++++++++.+||+++|+ +++.+++.+.+|.+.+.+ ++..++++++++++++||..+|+++|+.++++|+++|+
T Consensus       154 ~~~~~~~~~l~~~~~ff~L~d~-~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~y~~gq~i~al~~gi~~~igl~ilgv  232 (355)
T COG0628         154 LLSLIVSLLLVLVLLFFLLLDG-ERLRRKLIKLLPRKLRKRARRILSEVNATLSGYLRGQVLVALIVGILTGIGLLILGV  232 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCH-HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            4677778888888999999995 999999999999876533 56789999999999999999999999999999999999


Q ss_pred             ChhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhcccc----ccccCCCCCChHHHHHHHH
Q 006309          536 HFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTC----EIQEDIPGYSPYLTGLSII  611 (651)
Q Consensus       536 p~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~~l~~~~idn----~I~~~i~GiHP~Lt~LsIi  611 (651)
                      ||++++|++++++++||++|++++++|++++.+.+++...++..++...++.+..||    ++.++..++||+.+++|++
T Consensus       233 p~alllgil~g~~~lIP~iG~~i~~ip~~i~al~~~~~~~~l~~~~~~~vi~~i~~n~l~P~l~g~~~~l~p~~ilisll  312 (355)
T COG0628         233 PYALLLGLLAGLLSLIPYIGPVIGLIPAVIIALLQGGPWGALLVLIVFLVIQQIEGNILRPKLMGKRLGLHPLVILLSLL  312 (355)
T ss_pred             cHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcceeccccccccCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999844555554444444444555    4455556799999999999


Q ss_pred             HhhccccccccchhhHHHHHHHHHHHHHhhhcccc
Q 006309          612 GGMTLFPSALELLVIGDLIAGSNYGPTDNYSCHCT  646 (651)
Q Consensus       612 GGl~~F~~Gl~GlIlGPLIl~ll~~L~~iy~~~~~  646 (651)
                      +|..+|  |+.|+++||++.+++.++++.|.++..
T Consensus       313 ~g~~l~--G~~G~ila~pl~~~~k~~~~~~~~~~~  345 (355)
T COG0628         313 GGGSLF--GFVGLILAPPLAAVLKVLLRAWLEEEL  345 (355)
T ss_pred             HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999  999999999999999999999988543

>PRK12287 tqsA pheromone autoinducer 2 transporter; Reviewed

Probab=99.91  E-value=1.7e-22  Score=214.39  Aligned_cols=183  Identities=16%  Similarity=0.180  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCcchHHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 006309          457 VFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIH  536 (651)
Q Consensus       457 v~nfli~liIfl~~LFYLLsd~~~~l~~~v~~llP~~~~~~~rl~~~i~~aI~gV~~g~l~iAl~qGilT~Igf~IfGvp  536 (651)
                      +.+++.+++++++.+||++.|. +++.+++.+.+|.+++ ..+..++.++.++++++|+..+|+++|+.++++++++|+|
T Consensus       144 ~~~~~~~~~~~li~~ff~l~d~-~~~~~~~~~~~p~~~~-~~~~l~~~~~~~~~Y~~g~~i~~~i~gv~~~i~l~ilgv~  221 (344)
T PRK12287        144 LSNAMSSIFLLLLTVVFMLLEV-PQLPGKFQQMMARPVE-GMAAIQRALDSVSHYLVLKTAISIITGLVAWAMLAALDVR  221 (344)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHHHcCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4555666667777889999995 8899999999997764 3456788888999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHH----HhhhhccccccccCCCCCChHHHHHHHHH
Q 006309          537 FLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIH----LVLLDYGTCEIQEDIPGYSPYLTGLSIIG  612 (651)
Q Consensus       537 ~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~----~l~~~~idn~I~~~i~GiHP~Lt~LsIiG  612 (651)
                      |++++|++++++++||++||.++++|++++.+.+++...|+..++..    .+..++++|++.++..++||..+++|++.
T Consensus       222 ~alllgil~glln~IPyiG~~i~~ip~~l~~~~~~~~~~al~v~i~~~iiq~i~~nvi~P~i~g~~v~l~P~~vllsil~  301 (344)
T PRK12287        222 FAFVWGLLAFALNYIPNIGSVLAAIPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIF  301 (344)
T ss_pred             hHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhcchhhhhhhccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999998887776677655444    44456677777778888999999999999


Q ss_pred             hhccccccccchhhHHHHHHHHHHHHHhhhc
Q 006309          613 GMTLFPSALELLVIGDLIAGSNYGPTDNYSC  643 (651)
Q Consensus       613 Gl~~F~~Gl~GlIlGPLIl~ll~~L~~iy~~  643 (651)
                      |...+  |+.|+++++++.+++..+.+.+..
T Consensus       302 gg~l~--G~~G~ilavPl~~iik~~~~~~~~  330 (344)
T PRK12287        302 WGWLL--GPVGMLLSVPLTIIVKIALEQTAG  330 (344)
T ss_pred             HHHHH--HHhHHHHHHHHHHHHHHHHhcCCC
Confidence            99899  999999999999999999988875

>KOG2365 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.06  E-value=4.6e-05  Score=86.01  Aligned_cols=209  Identities=34%  Similarity=0.398  Sum_probs=126.6

Q ss_pred             HHHHHHHhhhHHHHHHHHHHHHH--HH---HHHHHHHHHHhhhhhhHHHHhhhccccccccccchhhhhhcccCCcchhh
Q 006309          244 FTRRILKRLETIVAIGLIVGMMV--VF---LAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMV  318 (651)
Q Consensus       244 ~~~~L~~~ld~vvSi~lIl~liv--~~---l~~svFl~~qi~~E~~~avi~l~s~v~n~t~~~~pel~~WLpendv~~~v  318 (651)
                      +++-|+..+++++++-.++.+++  +.   +.+.+|+-++++.|+++++-.++.|++..+|+|.-+-++|++|||+++++
T Consensus       363 ~~~pi~~~~k~L~~id~~v~~~lhd~~Dvl~S~~I~fll~ig~~~~~~~~~~k~H~E~vh~~e~tsn~~n~~~~~~p~~~  442 (808)
T KOG2365|consen  363 FTRPIMTRLKTLVAIDLIVLMILHDGSDVLLSGVIFFLLKIGVEGKDAVYSLKSHVEEVHYAEKTSNKQNMDENDVPGMV  442 (808)
T ss_pred             ecccHHHHHHHHHhhchhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhccCCcccchhHh
Confidence            44557778999999999999999  66   88899999999999999999999999999999988889999999999998


Q ss_pred             hhHHHHHHHHHHH---HHHhhhhhhceeeeecccccccccCCCCCcccchhhcccchhhHhhhhhccccchhhhhhHHHH
Q 006309          319 DRYTTTFYETVSE---QVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTE  395 (651)
Q Consensus       319 ds~~~~~Y~~v~e---~id~la~qyn~te~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~w~~~~~~  395 (651)
                      |-     |++-.|   .+|+-+.+...-. -+-+-|-++....++.+..+       ..|+ +      .-.-|+.+|..
T Consensus       443 d~-----~~~~~e~~~~~~~~~~~ayqyg-rtwl~~~i~~~~~~k~~na~-------~~e~-q------vl~~~d~ly~~  502 (808)
T KOG2365|consen  443 DM-----YTTKFEYETVSEQIDSLAYQYG-RTWLVTGIKHFVIGKPQNAT-------STES-Q------VLITPDPLYEK  502 (808)
T ss_pred             hh-----hhHHHHHHHHHHHHHHHHHHhh-hHHHHhhhHHHhcCCCCccc-------cchH-h------HhhcccHHHHH
Confidence            54     454433   1222221111100 00000000000000111100       0000 0      00122222222


Q ss_pred             HHHHH------HHh--------hhcHHHHHHHHHHHhh---hhhhhHHHHHhhhhHhhhhhHHHHHHHHHHHHHHHHHHH
Q 006309          396 VDAIF------REL--------VITREDLVQKAKEFAY---QGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVF  458 (651)
Q Consensus       396 vd~~~------~~~--------~~~~~~l~~~~k~~~~---~~~~v~~sI~~S~~svl~~~~sll~s~~s~ils~g~~v~  458 (651)
                      ..+..      ++.        ..-++|+..+ +|-+.   ++++...+|.+|+|+++..|.++.++..   .+.+.-++
T Consensus       503 w~~~n~~fv~~~~~~~~~v~~q~~~~~di~~~-~dlv~~vken~~t~m~I~qsv~~~~a~nVs~~~~~v---~sL~~Ii~  578 (808)
T KOG2365|consen  503 WMSLNTRFVKNREWSQIYVEVQVIFREDIITR-EDLVEKVKENAVTGMDISQSVFSSSASNVSGGAKFV---FSLGNIII  578 (808)
T ss_pred             HHHhccchhhccccceeeeEeeehhhHhhhhH-HHHHHHHHHhHHHHHHHHHHHHHHHhhhhhhHHHHH---HHHHHHHH
Confidence            11111      111        2456688877 65544   9999999999999999999999988774   44444444


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 006309          459 NFVSQLMIFLWVLYYLIT  476 (651)
Q Consensus       459 nfli~liIfl~~LFYLLs  476 (651)
                      .+...++=|+.-+--|++
T Consensus       579 s~g~~llNfi~~liIFLt  596 (808)
T KOG2365|consen  579 SGGAELLNFISQLIIFLT  596 (808)
T ss_pred             HhhHHHHHHHHHHHHHHH
Confidence            444444444444433443

>PF01594 UPF0118: Domain of unknown function DUF20; InterPro: IPR002549 This is a family of hypothetical proteins

Probab=89.99  E-value=14  Score=38.74  Aligned_cols=28  Identities=18%  Similarity=0.539  Sum_probs=13.5

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHhhcchh
Q 006309           89 FILYFIFKLLQDYIRPIQWAILLSIPLR  116 (651)
Q Consensus        89 ~~l~~~~~ll~~~~r~~qwa~l~s~~lr  116 (651)
                      ++++..+..+++++.|+-||+.++..++
T Consensus         9 l~~~~~~~~~~~~~~p~~~a~~la~~~~   36 (327)
T PF01594_consen    9 LLLFLFLWFISPFLLPFVLALVLAYLLN   36 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334444444455555555554444433

A number of the sequence records state they are transmembrane proteins or putative permeases. It is not clear what source suggested that these proteins might be permeases and this information should be treated with caution.

>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins

Probab=82.90  E-value=2.9  Score=40.17  Aligned_cols=86  Identities=12%  Similarity=-0.019  Sum_probs=50.8

Q ss_pred             hcccc-hhhHHHHHHHHHHHHhcchhHHHHHHHHH---Hhhhhccc---cccccCCCCCChHHHH---HHHHHhhccccc
Q 006309          550 LFPIF-PFWFATIPAAVQLLLESRYIVAISLSVIH---LVLLDYGT---CEIQEDIPGYSPYLTG---LSIIGGMTLFPS  619 (651)
Q Consensus       550 lIPi~-Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~---~l~~~~id---n~I~~~i~GiHP~Lt~---LsIiGGl~~F~~  619 (651)
                      ++|.+ |+.+++.-..+|.+.+|....+..+++..   .+.....|   +....+..|.+-.-+.   ++.+.|...+  
T Consensus         2 v~P~lPG~~l~~~g~l~~~~~~g~~~~~~~~l~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~ga~iG~IvG~f~~--   79 (140)
T PF04306_consen    2 VVPVLPGTPLIWLGILLYAFFTGFSEFGWWFLAILAVLALLGEVLDYLAGAYGAKRFGASRWGIWGAIIGGIVGFFVL--   79 (140)
T ss_pred             eeccCChHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh--
Confidence            56777 67777888888888877542222222111   11223333   4444455566655544   4555555555  


Q ss_pred             cccchhhHHHHHHHHHHH
Q 006309          620 ALELLVIGDLIAGSNYGP  637 (651)
Q Consensus       620 Gl~GlIlGPLIl~ll~~L  637 (651)
                      +..|+++||.+-+++..+
T Consensus        80 ~p~G~iiG~~~Ga~l~El   97 (140)
T PF04306_consen   80 PPLGLIIGPFLGAFLGEL   97 (140)
T ss_pred             hHHHHHHHHHHHHHHHHH
Confidence            778999999998885544

>COG0628 yhhT Predicted permease, member of the PurR regulon [General function prediction only]

Probab=81.85  E-value=81  Score=34.10  Aligned_cols=37  Identities=16%  Similarity=0.351  Sum_probs=25.4

Q ss_pred             hHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006309          242 SYFTRRILKR-LETIVAIGLIVGMMVVFLAGIIFFSYK  278 (651)
Q Consensus       242 ~~~~~~L~~~-ld~vvSi~lIl~liv~~l~~svFl~~q  278 (651)
                      ..+.++++|+ .+-..++.++++++++.+....++..-
T Consensus        51 ~p~~~~L~k~~~~r~~a~~~~~ll~~~ii~~~~~~~~p   88 (355)
T COG0628          51 NPLVRRLEKRGIPRLLAVLLVLLLILLLIVLLGLLVIP   88 (355)
T ss_pred             HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445566666 677778888888877777777666654

>PF10136 SpecificRecomb: Site-specific recombinase; InterPro: IPR011385 This group represents a site-specific recombinase Gcr

Probab=81.08  E-value=1.3e+02  Score=36.02  Aligned_cols=138  Identities=14%  Similarity=0.206  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCcchH-----HHHHHhhCCCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Q 006309          453 GAAEVFNFVSQLMIFLWVLYYLITSESGGV-----TEQVMGMLPISKPARIRCVEVIDNAISG---VLLATVEIAFFQGC  524 (651)
Q Consensus       453 ~g~~v~nfli~liIfl~~LFYLLsd~~~~l-----~~~v~~llP~~~~~~~rl~~~i~~aI~g---V~~g~l~iAl~qGi  524 (651)
                      +...-+|+.+++++.-+.=|=+-++ ++-+     -..+.+.  .+.+..+++.+.+-+.+++   -+.|++.+++-..+
T Consensus       360 ~~~~slNYa~gFvlI~llhfTvATK-QPAMTAaalA~~l~~~--~~~~~~~~la~lv~~l~RSQ~aAv~GNv~va~pvA~  436 (643)
T PF10136_consen  360 GFLASLNYALGFVLIHLLHFTVATK-QPAMTAAALAAALEEN--GKSANLEKLADLVADLIRSQFAAVLGNVLVAFPVAL  436 (643)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcC-ChHhhHHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            4444578888877554433333333 3432     2333333  2222335566666666553   45677777765554


Q ss_pred             -HHHHHHHHhcCChhHHHHHHHHHHhhcccchhhHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhccccc-cccCCC---
Q 006309          525 -LTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCE-IQEDIP---  599 (651)
Q Consensus       525 -lT~Igf~IfGvp~a~llg~LaailslIPi~Gt~iV~IPaal~Ll~qG~~~~AI~L~i~~~l~~~~idn~-I~~~i~---  599 (651)
                       +.|....++|-|..=---.-..+-++=|+ |+.+.+--           +.|++|++-++ +.++.||. .|.++.   
T Consensus       437 li~~~~~~~~g~pll~~~kA~~~L~sl~p~-s~al~~AA-----------iaGV~LF~Sgl-IaG~~dN~~~y~rl~~rl  503 (643)
T PF10136_consen  437 LIAWGYAQLFGQPLLSPEKAAYLLHSLDPF-SPALLYAA-----------IAGVWLFLSGL-IAGYFDNWFVYNRLPERL  503 (643)
T ss_pred             HHHHHHHHHcCCCCCCHHHHHHHHHhcCcc-ccHHHHHH-----------HHHHHHHHHHH-HHhhHHHHHHHhCHHHHH
Confidence             45666688999987767777888899998 76554331           14555555554 45666774 455543   


Q ss_pred             CCChHHH
Q 006309          600 GYSPYLT  606 (651)
Q Consensus       600 GiHP~Lt  606 (651)
                      ..||.+.
T Consensus       504 ~~hp~L~  510 (643)
T PF10136_consen  504 RHHPRLK  510 (643)
T ss_pred             HhChHHH
Confidence            3677665

Please see the following relevant reference: [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	651
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.4 bits (148), Expect = 7e-10
 Identities = 78/569 (13%), Positives = 149/569 (26%), Gaps = 215/569 (37%)

Query: 89  FILYFIFKLLQDYIRPI----QWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVA 144
           F+  F  K +QD  + I    +   ++      +   L  FW          T+L+    
Sbjct: 29  FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA-VSGTLRLFW----------TLLSKQEE 77

Query: 145 IFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVG 204
           + + FV  +              L+ N              +L+S     I  E      
Sbjct: 78  MVQKFVEEV--------------LRINYK------------FLMS----PIKTEQRQPSM 107

Query: 205 SLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRT-PFSSYFTRRI---------LKRLET 254
                                     R + +     F+ Y   R+         L  L  
Sbjct: 108 M------------------TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR- 148

Query: 255 IVAIGLIV-GMMVVFLAGIIFFSYKIGVEGKD--AVISIKSHVEESNYAERLGVKKWMEE 311
             A  +++ G+      G           GK   A+    S+  +        +  W+  
Sbjct: 149 -PAKNVLIDGV-----LGS----------GKTWVALDVCLSYKVQCKMD--FKI-FWLN- 188

Query: 312 NDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSL- 370
                 +    +   ETV E +  L   Y +    T                   L  L 
Sbjct: 189 ------LKNCNSP--ETVLEMLQKL--LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 371 --SPYTQKLMSLRNRVTKREW-KQIYTEVDAIF----RELVITREDLVQKAKEFAYQGIN 423
              PY   L+ L N V       +     +A F    + L+ TR                
Sbjct: 239 KSKPYENCLLVLLN-V----QNAKA---WNA-FNLSCKILLTTRF-------------KQ 276

Query: 424 VSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVT 483
           V+  + A              +T ++ +   +                      E   + 
Sbjct: 277 VTDFLSAA-------------TTTHISLDHHSMTLT----------------PDEVKSLL 307

Query: 484 EQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLY--MS 541
            + +   P   P  +          +   L+ +  +   G  TW     +K H     ++
Sbjct: 308 LKYLDCRPQDLPREVL-------TTNPRRLSIIAESIRDGLATW---DNWK-HVNCDKLT 356

Query: 542 TTL-AFISALFP-----------IFP------------FWFATIPAAVQLLLESRYIVAI 577
           T + + ++ L P           +FP             WF  I + V +++    +   
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK--LHKY 414

Query: 578 SL---------SVIHLVLLDYGTCEIQED 597
           SL           I  + L+    +++ +
Sbjct: 415 SLVEKQPKESTISIPSIYLEL-KVKLENE 442

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 58/346 (16%), Positives = 99/346 (28%), Gaps = 96/346 (27%)

Query: 305 VKKWMEENDVPGMVDRYTTTFYETVSEQV-----DSLAMQYNMTEFVTGIKHFVIAPPAG 359
           +   +   D      R   T      E V     + L + Y           F+++P   
Sbjct: 51  IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK----------FLMSPIKT 100

Query: 360 SSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAY 419
              Q       S  T+  +  R+R        +Y +   +F +  ++R     K ++   
Sbjct: 101 EQRQP------SMMTRMYIEQRDR--------LYNDNQ-VFAKYNVSRLQPYLKLRQALL 145

Query: 420 QGINVSQRVF----AGSA-SVLGSSAKLMLSTGYLIISGAAEVF--NF-----VSQLMIF 467
           + +  ++ V      GS  + +         +  +      ++F  N         ++  
Sbjct: 146 E-LRPAKNVLIDGVLGSGKTWVALDV---CLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 468 LWVLYYLITSESGGVTEQVMGMLPISKP-----ARIR----------CVEVIDNAISGVL 512
           L  L Y I       T +      I        A +R          C+ V+ N    V 
Sbjct: 202 LQKLLYQIDPNW---TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN----VQ 254

Query: 513 LATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESR 572
            A    AF   C   L  RF ++     + T   IS           T      LL   +
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL---TPDEVKSLL--LK 309

Query: 573 YIVAISLSVIHLVLLDYGTCEIQEDIP----GYSPYLTGLSIIGGM 614
           Y+                 C  Q D+P      +P    LSII   
Sbjct: 310 YL----------------DCRPQ-DLPREVLTTNPRR--LSIIAES 336

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00