Citrus Sinensis ID: 006553

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-
MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccEEEccccccccccccEEEEEcccccccccccccccccEEEEEccccccccccccccHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHcccccccccEEEEEEcccEEccccccccccccccHHHHHHcccccccccccEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccc
ccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccEEEccccccccccHHHHHHHHccEEccccccccccHHccccccccEEccccccccccccEEEEEEccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEEcccccccccEEccccccHHHHHHccccccccccHHHcccccccccHHHHHHHHHHHHHccccccccccccEEEEEcccEEEEEcccEEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcc
MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYrlvnfprgggrrrAWIGIFMAEFFLSLFWIISQSVRwnvkhnlpskerlslryeeklpgvdilvctadpileppamkqyEDMKIQIESATEKGSISEELRSQHKGFlewdhkvskqnhQPIVQIIIdgrdtnavdnegcqlptlvymarekrpecphnfkaGAMNALIRVSSeisngpiilnldcdmyaNDADAIREALCFFMdekrgheiafvqhpqcfdiisendlyghynLVENQVELAGlggydaamycgtacfhrrdslsgakysydcrninearnkdkrSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQcrgwksmhynperpaflglapvtldnSLVQIKRWSEGLFQIFFSKycpfiygygkiklGARMGYCNyllwaplslptlfyvivppvcllhgislfpkvtslwfipfaYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLrrdkgclpfsVMLKSVVFASLACLMPL
MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRninearnkdkrsvdeLEKASkvlascsyekdtqwGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPrgggrrrAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMlnllsligglinTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
**********LAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILE********************************GFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNI*******************VLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACL***
*EPLF**KKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDEL******************GREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITA*********RYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNK********EKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
**PLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoo
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MEPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSKERLSLRYEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYSYDxxxxxxxxxxxxxxxxxxxxxSKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query641 2.2.26 [Sep-21-2011]
Q651X6728 Cellulose synthase-like p yes no 0.814 0.717 0.521 1e-167
Q651X7737 Cellulose synthase-like p yes no 0.823 0.716 0.508 1e-164
Q8VZK9729 Cellulose synthase-like p yes no 0.806 0.709 0.508 1e-151
Q0DXZ1745 Cellulose synthase-like p no no 0.829 0.714 0.475 1e-147
Q570S7760 Cellulose synthase-like p no no 0.781 0.659 0.372 9e-95
Q8VYR4722 Cellulose synthase-like p no no 0.773 0.686 0.357 2e-93
Q0WVN5751 Cellulose synthase-like p no no 0.783 0.668 0.369 4e-92
Q9SWW61026 Cellulose synthase A cata no no 0.833 0.520 0.297 3e-74
Q69P511055 Cellulose synthase A cata no no 0.837 0.509 0.297 1e-72
A2Z1C81055 Cellulose synthase A cata N/A no 0.837 0.509 0.297 1e-72
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  590 bits (1520), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 278/533 (52%), Positives = 388/533 (72%), Gaps = 11/533 (2%)

Query: 114 YEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDNEG 173
           YE+M+ +I+SA   G I EE++ +HKGF EW+ +++ +NHQPIVQ++IDG+  NAVD++G
Sbjct: 201 YEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAVDDDG 260

Query: 174 CQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREA 233
             LPTLVYMAREK P+  HNFKAGA+NALIRVS+ IS+ P+ILN+DCDMY+N++D+IR+A
Sbjct: 261 NVLPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNNSDSIRDA 320

Query: 234 LCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACF 293
           LCFF+DE+  H+I FVQ+PQ ++ +++N++YG+   V N VE+ GL      +Y GT CF
Sbjct: 321 LCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLYIGTGCF 380

Query: 294 HRRDSLSGAKYSYD-----CRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMG 348
           HRR+ L G K+S D      R I E   +   ++DE+E+ +K LA+C+YE  TQWG E+G
Sbjct: 381 HRREILCGKKFSKDYKEDWGRGIKE---RGHENIDEIEEKAKSLATCTYELRTQWGNEIG 437

Query: 349 LVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFF 408
           + YG  VEDV+TGL I CRGW+S++  P+R AF+G+AP TL  +++Q KRWSEG F IF 
Sbjct: 438 VKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFL 497

Query: 409 SKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWF 468
           SK+  F++G+GKI L  +MGYC Y LWA  SLPT++YV++P + L+ G  LFP++ S W 
Sbjct: 498 SKHNTFLFGHGKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWA 557

Query: 469 IPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQT 528
            PF YVF  KT+YS+YE++  G TLK WWN QRM +++R T++ +GF D I + LGLS+ 
Sbjct: 558 TPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKM 617

Query: 529 AFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFGAL 588
           +F ITAKV   D  KRYEQEI+EFGSSS  F IIAT+A+LN + L+ GL   +    G  
Sbjct: 618 SFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGLSKIM---AGVW 674

Query: 589 QNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL 641
              + Q+ILCGL+++ ++PIYEA+F+R+DKG +P  V L S+ F  LA L+P+
Sbjct: 675 NVFLPQVILCGLIVITNIPIYEAMFVRKDKGRIPLPVTLASIGFVMLAFLLPI 727
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query641
71493366740 cellulose synthase-like protein CslE [Ni 0.820 0.710 0.663 0.0
255563556606 cellulose synthase, putative [Ricinus co 0.823 0.871 0.651 0.0
296089938675 unnamed protein product [Vitis vinifera] 0.825 0.783 0.613 0.0
225461955736 PREDICTED: cellulose synthase-like prote 0.825 0.718 0.613 0.0
449516826 757 PREDICTED: LOW QUALITY PROTEIN: cellulos 0.823 0.697 0.610 0.0
356553499736 PREDICTED: cellulose synthase-like prote 0.822 0.716 0.607 0.0
449462387731 PREDICTED: cellulose synthase-like prote 0.811 0.711 0.613 0.0
147773093718 hypothetical protein VITISV_036212 [Viti 0.795 0.710 0.586 0.0
225469932735 PREDICTED: cellulose synthase-like prote 0.893 0.779 0.535 1e-179
359496765735 PREDICTED: cellulose synthase-like prote 0.893 0.779 0.533 1e-178
>gi|71493366|gb|AAZ32787.1| cellulose synthase-like protein CslE [Nicotiana tabacum] Back     alignment and taxonomy information
 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/535 (66%), Positives = 442/535 (82%), Gaps = 9/535 (1%)

Query: 112 KQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVDN 171
           K YEDMK +IE+A E GSI  E+++QHKGF EW+ KV+K +H  IVQI+IDGR+ N  D 
Sbjct: 209 KLYEDMKTRIEAAIESGSIPCEIKAQHKGFSEWNSKVTKHDHHSIVQILIDGRNHNMADV 268

Query: 172 EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIR 231
           +G +LPTLVYM+REK+P+CPHNFKAG+MN+LIRVSS+ISN PIILNLDCDMY+ND DAIR
Sbjct: 269 DGNRLPTLVYMSREKKPKCPHNFKAGSMNSLIRVSSQISNAPIILNLDCDMYSNDPDAIR 328

Query: 232 EALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTA 291
           E+LCFFMDEK+GHEIAFVQ+PQ ++  ++ND+YG+   V +++ELAGLGGY AA+YCGT 
Sbjct: 329 ESLCFFMDEKKGHEIAFVQYPQRYNNATKNDIYGNVARVTHEIELAGLGGYGAALYCGTG 388

Query: 292 CFHRRDSLSGAKYSYDCRNINEARNKDK----RSVDELEKASKVLASCSYEKDTQWGREM 347
           CFHRR+SL G K S +   + E  NK++    ++V+ELE+ASKV+A+CSYE+ TQWG++M
Sbjct: 389 CFHRRESLCGRKVSEEYTTV-EWNNKEEKCTYKTVEELEEASKVVANCSYEEGTQWGKQM 447

Query: 348 GLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIF 407
           GL+YG  VED++TGLTIQCRGWKS++YNP +PAFLG+AP  LD +LVQ KRWSEGLFQIF
Sbjct: 448 GLIYGCPVEDIITGLTIQCRGWKSVYYNPSKPAFLGVAPTILDVALVQHKRWSEGLFQIF 507

Query: 408 FSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLW 467
            SKYCPFIYG+GKIK  A+MGYC YLLWAP+S+PTLFYV VP +CLLHG+SLFP+V+SLW
Sbjct: 508 LSKYCPFIYGHGKIKFAAQMGYCIYLLWAPVSVPTLFYVSVPSLCLLHGVSLFPEVSSLW 567

Query: 468 FIPFAYV-FTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLS 526
           F+PFAYV FT K VYS+ E+MSCG T KSWWN QRM +IRR TA+FF F D +I+QLGLS
Sbjct: 568 FLPFAYVLFTAKFVYSLAEAMSCGDTPKSWWNLQRMWMIRRTTAYFFAFIDSVIKQLGLS 627

Query: 527 QTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLEFG 586
           QTAFA+T KVV +DV +RYEQEIMEFGSSS MFTI ATLA+LNL+S I G+     L   
Sbjct: 628 QTAFALTTKVVDDDVQRRYEQEIMEFGSSSAMFTITATLALLNLISFIWGIKK---LALD 684

Query: 587 ALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLACLMPL 641
            + N + Q+ILCGL++LV+VP+YEALF R DKG  P SV+L+SVV  S+ACL+P+
Sbjct: 685 GVVNTVPQVILCGLIVLVNVPVYEALFFRSDKGSFPSSVLLRSVVLVSIACLLPI 739

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255563556|ref|XP_002522780.1| cellulose synthase, putative [Ricinus communis] gi|223538018|gb|EEF39631.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296089938|emb|CBI39757.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461955|ref|XP_002266273.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449516826|ref|XP_004165447.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase-like protein E6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356553499|ref|XP_003545093.1| PREDICTED: cellulose synthase-like protein E6-like [Glycine max] Back     alignment and taxonomy information
>gi|449462387|ref|XP_004148922.1| PREDICTED: cellulose synthase-like protein E6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147773093|emb|CAN62860.1| hypothetical protein VITISV_036212 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225469932|ref|XP_002274290.1| PREDICTED: cellulose synthase-like protein E6-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359496765|ref|XP_003635328.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query641
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.804 0.707 0.507 2.8e-165
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.783 0.660 0.361 9.9e-95
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.851 0.756 0.336 1e-92
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.858 0.732 0.352 3e-91
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.475 0.297 0.294 5.8e-78
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.293 0.176 0.438 2e-77
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.482 0.294 0.291 2.3e-76
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.491 0.294 0.292 6.2e-76
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.560 0.364 0.278 1.3e-75
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.478 0.283 0.287 1.9e-75
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1392 (495.1 bits), Expect = 2.8e-165, Sum P(2) = 2.8e-165
 Identities = 268/528 (50%), Positives = 354/528 (67%)

Query:   112 KQYEDMKIQIESATEKGSISEELRSQH-KGFLEWDHKVSKQNHQPIVQIIIDGRDTNAVD 170
             K Y +M  +IE+A   G I EE R ++  GF +WD   +++NH  I+Q+++DGR+ N + 
Sbjct:   206 KLYREMAARIETAARLGRIPEEARVKYGDGFSQWDADATRRNHGTILQVLVDGREGNTI- 264

Query:   171 NEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAI 230
                  +PTLVY++REKRP+  HNFKAGAMNAL+RVSS+I+ G IILNLDCDMYAN++ + 
Sbjct:   265 ----AIPTLVYLSREKRPQHHHNFKAGAMNALLRVSSKITCGKIILNLDCDMYANNSKST 320

Query:   231 REALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGT 290
             R+ALC  +DEK G EIAFVQ PQCFD ++ NDLYG    V   VE  GL G    +Y GT
Sbjct:   321 RDALCILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGT 380

Query:   291 ACFHRRDSLSGAKYSYDCRNINEARNKDKRSVDELE-KASKVLASCSYEKDTQWGREMGL 349
              CFHRRD + G KY  +     E   + +R  + LE +  K LASC+YE++TQWG+EMG+
Sbjct:   381 GCFHRRDVICGRKYGEE-----EEEEESERIHENLEPEMIKALASCTYEENTQWGKEMGV 435

Query:   350 VYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLFQIFFS 409
              YG  VEDV+TGLTIQCRGWKS + NPE+ AFLG+AP  L   LVQ +RWSEG FQI  S
Sbjct:   436 KYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLS 495

Query:   410 KYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFI 469
             KY P  YG GKI LG  +GYC Y LWAP SLP L Y ++  +CL  GI LFPKV+S WFI
Sbjct:   496 KYSPVWYGKGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFI 555

Query:   470 PFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTA 529
             PF YV    T YS+ E + CG T + WWN QRM + RR ++F FGF D I + LG+S++A
Sbjct:   556 PFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESA 615

Query:   530 FAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMXXXXXXXXXXXXTIFLEFGALQ 589
             F ITAKV  E+  +RY++E+MEFG  S MF ++ TL M             +  + G L+
Sbjct:   616 FVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDGGDLK 675

Query:   590 NLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASLAC 637
              +  Q ++ G++++++ P+Y+ + LR+DKG +P SV +KSVV A  AC
Sbjct:   676 TMGMQFVITGVLVVINWPLYKGMLLRQDKGKMPMSVTVKSVVLALSAC 723
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0009832 "plant-type cell wall biogenesis" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZK9CSLE1_ARATH2, ., 4, ., 1, ., -0.50850.80650.7091yesno
Q651X7CSLE1_ORYSJ2, ., 4, ., 1, ., -0.50840.82370.7164yesno
Q651X6CSLE6_ORYSJ2, ., 4, ., 1, ., -0.52150.81430.7170yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00010946001
SubName- Full=Chromosome undetermined scaffold_296, whole genome shotgun sequence; (746 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query641
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-153
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 4e-90
PLN021891040 PLN02189, PLN02189, cellulose synthase 4e-81
PLN024361094 PLN02436, PLN02436, cellulose synthase A 1e-80
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 3e-75
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 6e-48
PLN02195977 PLN02195, PLN02195, cellulose synthase A 5e-45
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 1e-42
PLN024001085 PLN02400, PLN02400, cellulose synthase 1e-42
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 3e-40
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 3e-40
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 4e-40
PLN02195977 PLN02195, PLN02195, cellulose synthase A 6e-40
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 5e-37
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 2e-22
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-20
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-14
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 3e-08
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 6e-07
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 5e-06
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 3e-05
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 3e-05
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 3e-05
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 4e-05
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 1e-04
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 7e-04
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  458 bits (1179), Expect = e-153
 Identities = 210/529 (39%), Positives = 307/529 (58%), Gaps = 15/529 (2%)

Query: 114 YEDMKIQIESATEKGSISEEL---RSQHKGFLEWDHKVSKQNHQPIVQIIID-GRDTNAV 169
           YE MK+++E+  E+G +S +      + + F  W  K ++Q+H  ++Q++++ G+D    
Sbjct: 200 YESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK--- 256

Query: 170 DNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADA 229
           D  G  +P L+Y++REK    PH+FKAGA+N L+RVS+ ++N PIIL LDCDMY+ND   
Sbjct: 257 DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQT 316

Query: 230 IREALCFFMDEKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCG 289
              ALC+ +D     ++ +VQ PQ F  I++ND+Y        Q+ + G+ G     Y G
Sbjct: 317 PLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVG 376

Query: 290 TACFHRRDSLSGAKYSYDCRNINEAR-----NKDKRSVDELEKASKVLASCSYEKDTQWG 344
           T CF RR    G   S     I E       +K  +S + L  A  V A C+YE  T WG
Sbjct: 377 TGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHV-AGCNYENQTNWG 435

Query: 345 REMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQIKRWSEGLF 404
            +MG  YG  VED  TG  +QC GWKS+  NP+RPAFLG +P+ L + L Q KRWS GL 
Sbjct: 436 SKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLL 495

Query: 405 QIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVT 464
           ++ FSKY P  +G   I L   +GY +Y  W   S+P   Y  +P + LL+G+S+FPK +
Sbjct: 496 EVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKAS 555

Query: 465 SLWFIPFAYVFTTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLG 524
             WF  + ++F       + + +  G T++ WWN QRM +IR  ++F FG  + +++ LG
Sbjct: 556 DPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLG 615

Query: 525 LSQTAFAITAKVVTEDVLKRYEQEIMEFGSSSVMFTIIATLAMLNLLSLIGGLINTIFLE 584
           +S   F +T+KVV E+  KRYEQ I EFG SS MF  + T A++NL+S + G+   IF +
Sbjct: 616 ISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQ-IFRQ 674

Query: 585 FGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFA 633
              L+ L  Q+ L G  ++   PIYEA+ LR D G LP  + L S+V A
Sbjct: 675 -RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLA 722

Length = 734
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 641
PLN02893734 Cellulose synthase-like protein 100.0
PLN021891040 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN024361094 cellulose synthase A 100.0
PLN024001085 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN022481135 cellulose synthase-like protein 100.0
PLN02190756 cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 100.0
PRK11204420 N-glycosyltransferase; Provisional 100.0
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 100.0
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 100.0
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.98
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.96
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.96
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.96
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.96
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.95
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.94
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.94
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.93
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.92
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.92
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.91
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.91
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.89
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.89
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.83
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.82
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.81
cd06438183 EpsO_like EpsO protein participates in the methano 99.76
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.71
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.68
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.65
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.63
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.62
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.62
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.6
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.57
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.57
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.56
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.55
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.55
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.53
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.5
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.49
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.48
PRK10073328 putative glycosyl transferase; Provisional 99.47
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.46
PRK10063248 putative glycosyl transferase; Provisional 99.44
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.41
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.4
PRK10018279 putative glycosyl transferase; Provisional 99.35
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.34
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.31
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.23
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.21
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.2
COG1216305 Predicted glycosyltransferases [General function p 99.13
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.09
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 99.06
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.89
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.73
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 98.55
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.47
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 98.43
KOG2977323 consensus Glycosyltransferase [General function pr 97.96
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.48
KOG3737603 consensus Predicted polypeptide N-acetylgalactosam 96.93
KOG3736578 consensus Polypeptide N-acetylgalactosaminyltransf 96.16
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 94.15
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 93.71
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 93.45
KOG3738559 consensus Predicted polypeptide N-acetylgalactosam 93.27
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 85.33
PRK14503393 mannosyl-3-phosphoglycerate synthase; Provisional 81.17
TIGR02460381 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase 80.38
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=8.3e-147  Score=1234.21  Aligned_cols=631  Identities=36%  Similarity=0.683  Sum_probs=585.3

Q ss_pred             CCcchhhhhhcccchHhHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHhHhhceeccCCcch
Q 006553            2 EPLFETKKELAKAKFFHRVYAATVFVGICLILNYRLVNFPRGGGRRRAWIGIFMAEFFLSLFWIISQSVRWNVKHNLPSK   81 (641)
Q Consensus         2 ~pl~~~~~~~~~~~~~~R~~~~~~~~~~~~~l~~R~~~l~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~   81 (641)
                      +||||+++  .+++.+||+++++++++|+++++||+++++.++. .|.|+++++||+||+|+|+++|+.||+|++|.+++
T Consensus        12 ~pL~~~~~--~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~~-~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~~~   88 (734)
T PLN02893         12 PPLHTCHP--MRRTIANRVFAVVYSCAILALLYHHVIALLHSTT-TLITLLLLLADIVLAFMWATTQAFRMCPVHRRVFI   88 (734)
T ss_pred             CCceeeee--cCCchHHHHHHHHHHHHHHHHHHHHhcccccccc-hHHHHHHHHHHHHHHHHHHHccCccccccccccCH
Confidence            68999999  9998889999999999999999999999887753 68999999999999999999999999999999999


Q ss_pred             hhhhhhc-cCCCCceEEEEecCCCCCCChhh-------------------------------------------------
Q 006553           82 ERLSLRY-EEKLPGVDILVCTADPILEPPAM-------------------------------------------------  111 (641)
Q Consensus        82 ~~l~~~~-~~~~P~VdV~Ipt~nE~~e~p~~-------------------------------------------------  111 (641)
                      |||+++. ++++|.|||||||+||.+|||++                                                 
T Consensus        89 ~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFC  168 (734)
T PLN02893         89 EHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFC  168 (734)
T ss_pred             HHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccc
Confidence            9998654 35799999999999999999998                                                 


Q ss_pred             -----------------------------hhhHHHHHHHHHHHhcCCCcHHHH---hhccCccccccccccCCCcceEEE
Q 006553          112 -----------------------------KQYEDMKIQIESATEKGSISEELR---SQHKGFLEWDHKVSKQNHQPIVQI  159 (641)
Q Consensus       112 -----------------------------~~y~~~~~~I~~a~~~~~~p~~~~---~~~~~~~~w~~~~~~~~h~~~I~V  159 (641)
                                                   +||||+|++|+++.+.++.|++..   ...++|..|+++.+++||+.+|+|
T Consensus       169 rk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV  248 (734)
T PLN02893        169 KKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQV  248 (734)
T ss_pred             cccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeee
Confidence                                         999999999999998899997742   234668999999999999999999


Q ss_pred             EecCCChhHHhhhcCCCCcEEEEEccCCCCCCCCChHHHHHHHHHhcccCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006553          160 IIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMD  239 (641)
Q Consensus       160 ldD~~~~~~~~~~~~~~p~v~yv~R~krp~~~~~~KAGaLN~~l~~s~~~t~g~~ililDAD~~~~~p~~L~~~v~~f~d  239 (641)
                      +.|++++.  +..+.++|+++|++|||||+++||+||||||+++|+|+.+||||||+|+||||++|+|++++++||||+|
T Consensus       249 ~l~~~~~~--d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~D  326 (734)
T PLN02893        249 LLESGKDK--DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLD  326 (734)
T ss_pred             eccCCCcc--chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcC
Confidence            99987664  4456779999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             ccCCceEEEEecCcccccCCcccccccchhhHHHHHHHhhhhcCCceecccceeEehhhhcCcccc--cccccccccccc
Q 006553          240 EKRGHEIAFVQHPQCFDIISENDLYGHYNLVENQVELAGLGGYDAAMYCGTACFHRRDSLSGAKYS--YDCRNINEARNK  317 (641)
Q Consensus       240 ~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~~~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~~~~~~~  317 (641)
                      |+.++++|+||+||+|+|.++||+|++++++||+++++|+||++|++||||||+|||+||+|....  .++.++++.++.
T Consensus       327 p~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~  406 (734)
T PLN02893        327 PSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHL  406 (734)
T ss_pred             CCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccc
Confidence            988999999999999999999999999999999999999999999999999999999999986431  122222222211


Q ss_pred             --cccchHHHHHhhhhhhccccccCCCccccccccCCCccchHHHHHHHHHcCCeEEEeCCCCCcccccCCCCHHHHHHH
Q 006553          318 --DKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFLGLAPVTLDNSLVQ  395 (641)
Q Consensus       318 --~~~~~~~ig~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Q  395 (641)
                        .+...+++.++|++|++|+||++|.||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.++++|
T Consensus       407 ~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q  486 (734)
T PLN02893        407 VDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQ  486 (734)
T ss_pred             cccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHH
Confidence              223456788899999999999999999999999999999999999999999999999988888999999999999999


Q ss_pred             HhhhccchhhHHhhcccccccccCCCCcchhhhhhhhhhhhhhHHHHHHHHHhhhHHHhhCCccccccchhhHHHHHHHH
Q 006553          396 IKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPTLFYVIVPPVCLLHGISLFPKVTSLWFIPFAYVF  475 (641)
Q Consensus       396 r~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~l~~g~~~~~~~~~~~~~~~~~~~  475 (641)
                      |+||++|++|++++|+||+++|.++|++.||++|++.++||+.++|+++|+++|++||++|++++|+.+.+|+++|++++
T Consensus       487 ~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~  566 (734)
T PLN02893        487 QKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLF  566 (734)
T ss_pred             HHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHH
Confidence            99999999999999999999776889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCcchhhhhhhhHHHHHhhHHHHHHHHHHHHHHhcCCCCCeeeCCCCcchhhhhhhhhhhhccccc
Q 006553          476 TTKTVYSIYESMSCGYTLKSWWNFQRMQIIRRATAFFFGFADVIIEQLGLSQTAFAITAKVVTEDVLKRYEQEIMEFGSS  555 (641)
Q Consensus       476 ~~~~~~~l~~~~~~G~s~~~ww~~q~~w~i~~~~~~~~~~~~~~~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~  555 (641)
                      +++++++++|++++|.++++|||+||+|+|.++++++++++++++|.+|+++.+|+||+|+.+++++++|++|.|+|+.+
T Consensus       567 ~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~  646 (734)
T PLN02893        567 LGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVS  646 (734)
T ss_pred             HHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999998888889999999999888


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCccceehhhHHHHHHHH
Q 006553          556 SVMFTIIATLAMLNLLSLIGGLINTIFLEFGALQNLISQIILCGLMILVSVPIYEALFLRRDKGCLPFSVMLKSVVFASL  635 (641)
Q Consensus       556 ~~l~~p~~~l~~l~l~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~~l~~r~~~~~~p~~v~~~s~~~a~~  635 (641)
                      +|+++|+++++++|++|+++|+++++.+  +.++++++|++|++|+|++++||++|+++|+|||++|++++++|+++|.+
T Consensus       647 spl~ip~ttl~llNl~a~v~Gi~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~  724 (734)
T PLN02893        647 SPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWA  724 (734)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHH
Confidence            9999999999999999999999998875  45889999999999999999999999999999999999999999999998


Q ss_pred             hhcc
Q 006553          636 ACLM  639 (641)
Q Consensus       636 ~~~~  639 (641)
                      +|++
T Consensus       725 ~~~~  728 (734)
T PLN02893        725 LYLA  728 (734)
T ss_pred             HHHH
Confidence            8864

>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query641
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 8e-12
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 147/378 (38%), Gaps = 80/378 (21%)
Query: 90  EKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVS 149
           E+LP VDILV         P+  +  DM     +A +       LR+     L  D    
Sbjct: 137 EELPTVDILV---------PSYNEPADMLSVTLAAAKNMIYPARLRTV---VLCDDGGTD 184
Query: 150 KQNHQPIVQIIIDGRDTNAVDNEGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEI 209
           ++   P  ++    ++      + C+   +VY  RE+      + KAG M+A +    E 
Sbjct: 185 QRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAAL----ER 236
Query: 210 SNGPIILNLDCDMYANDADAIREALCFFMDEKRGHEIAFVQHPQCF---DIISENDLYGH 266
             G +++  D D +    D +   + +F+++    ++  VQ P  F   D I  N   G 
Sbjct: 237 LKGELVVVFDAD-HVPSRDFLARTVGYFVEDP---DLFLVQTPHFFINPDPIQRNLALGD 292
Query: 267 YNLVENQVELA----GLGGYDAAMYCGTACFHRRDSLSGAKYSYDCRNINEARNKDKRSV 322
               EN++       GL  +  A +CG+A   RR                       R++
Sbjct: 293 RCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRR-----------------------RAL 329
Query: 323 DELEKASKVLASCSYEKDTQWGREMGLVYGYAVEDVVTGLTIQCRGWKSMHYNPERPAFL 382
           DE         +  +  +T              ED  T L I  RGWKS++ +  R    
Sbjct: 330 DE---------AGGFAGET------------ITEDAETALEIHSRGWKSLYID--RAMIA 366
Query: 383 GLAPVTLDNSLVQIKRWSEGLFQIFFSKYCPFIYGYGKIKLGARMGYCNYLLWAPLSLPT 442
           GL P T  + + Q  RW+ G+ Q+   K   F  G G   +  R+ Y N + +    L  
Sbjct: 367 GLQPETFASFIQQRGRWATGMMQMLLLKNPLFRRGLG---IAQRLCYLNSMSFWFFPLVR 423
Query: 443 LFYVIVPPVCLLHGISLF 460
           + +++ P + L  GI +F
Sbjct: 424 MMFLVAPLIYLFFGIEIF 441
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query641
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.89
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.69
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.32
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 98.48
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 94.54
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 84.77
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.2e-22  Score=150.44  Aligned_cols=202  Identities=14%  Similarity=0.064  Sum_probs=132.8

Q ss_pred             CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHH
Q ss_conf             04999932899825899999802565699999999999507886888731158643344334578845279876289916
Q 006553           88 YEEKLPGVDILVCTADPILEPPAMKQYEDMKIQIESATEKGSISEELRSQHKGFLEWDHKVSKQNHQPIVQIIIDGRDTN  167 (641)
Q Consensus        88 ~~~~~P~VdV~I~t~nE~~e~~~~~~y~~~~~~I~~a~~~~~~p~~~~~~~~~f~~w~~~~~~~~h~~~I~VldD~~~~~  167 (641)
                      ++++.|.|+|+||||||..+.        +.++|+++++ +++|.                    ...+|.|+||+++|+
T Consensus        17 ~~~~~P~vSIIIp~yNe~~~~--------l~~~l~Si~~-qt~~~--------------------~~~EIIvVDdgS~d~   67 (328)
T d1xhba2          17 YPDNLPTTSVVIVFHNEAWST--------LLRTVHSVIN-RSPRH--------------------MIEEIVLVDDASERD   67 (328)
T ss_dssp             CCSCCCCEEEEEEESSCCHHH--------HHHHHHHHHH-SSCGG--------------------GEEEEEEEECSCCCG
T ss_pred             CCCCCCCEEEEEECCCCCHHH--------HHHHHHHHHH-CCCCC--------------------CCEEEEEEECCCCHH
T ss_conf             899999889999226781799--------9999999996-47777--------------------972999997999703


Q ss_pred             HH----HH-HCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             88----63-05889948999905799999998089999999861567899889995699888966899999998653359
Q 006553          168 AV----DN-EGCQLPTLVYMAREKRPECPHNFKAGAMNALIRVSSEISNGPIILNLDCDMYANDADAIREALCFFMDEKR  242 (641)
Q Consensus       168 ~~----~~-~~~~~p~l~Yi~R~~rp~~~~~~KAGaLN~~l~~s~~~t~~~~ililDaD~~~~~p~~L~~~v~~f~d~~~  242 (641)
                      ..    +. .....+.+++++.++     ..|.++|.|.|++.    ++||+|+.+|+|.++ +|++|.+++..|.+.+ 
T Consensus        68 ~~~~~l~~~~~~~~~~i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~-~p~~l~~l~~~~~~~~-  136 (328)
T d1xhba2          68 FLKRPLESYVKKLKVPVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHDR-  136 (328)
T ss_dssp             GGTHHHHHHHHSSSSCEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHCT-
T ss_pred             HHHHHHHHHHHHCCCCEEEEEECC-----CCCCHHHHHHHHHH----HHCCEEEECCCCCCC-CHHHHHHHHHHHHCCC-
T ss_conf             579999999985689709997324-----43216887899986----311002201765566-7369999999996389-


Q ss_pred             CCEEEEEECCCCCCCCC-------CCCCCCC-------C-HHHHHHHHHHHHHHC----CCCEECCCCEEEEHHHHCCCC
Q ss_conf             96299991674112378-------6632222-------0-246788898864205----980000343448536421764
Q 006553          243 GHEIAFVQHPQCFDIIS-------ENDLYGH-------Y-NLVENQVELAGLGGY----DAAMYCGTACFHRRDSLSGAK  303 (641)
Q Consensus       243 ~~~va~VQ~pq~f~n~~-------~~d~~~~-------~-~~~~~~~~~~g~d~~----~~~~~~Gtg~~~RR~aL~~~~  303 (641)
                        . +.|..+....+.+       .....+.       . ...............    ..+..+|+++++||+++.+  
T Consensus       137 --~-~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~--  211 (328)
T d1xhba2         137 --R-TVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQE--  211 (328)
T ss_dssp             --T-EEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHH--
T ss_pred             --C-EEEECCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCEEEEEEHHHHHH--
T ss_conf             --7-47741044661676022157753334433122322245624543202345566632341322111322999998--


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEECC
Q ss_conf             665321100001223103689999611110244445787662013458875---6529999999985985997199
Q 006553          304 YSYDCRNINEARNKDKRSVDELEKASKVLASCSYEKDTQWGREMGLVYGYA---VEDVVTGLTIQCRGWKSMHYNP  376 (641)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~ig~~a~~v~~c~Ye~~t~wG~~~G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~  376 (641)
                                           +|                     ||+++-.   .||+++++|+..+||++.|.+.
T Consensus       212 ---------------------vG---------------------gfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~  245 (328)
T d1xhba2         212 ---------------------IG---------------------TYDAGMDIWGGENLEISFRIWQCGGTLEIVTC  245 (328)
T ss_dssp             ---------------------TT---------------------SCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE
T ss_pred             ---------------------HC---------------------CCCCCCCCCCCHHHHHHHHHHHHCCEEEEECC
T ss_conf             ---------------------18---------------------99987767675699999999980991999377
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure