Citrus Sinensis ID: 006651

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------
Protein Sequence
MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNHKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNVQS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEcEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccEEEEEEEEEcccccEEEEEEccccEEEEEEEccccccccccccEEEEEEEccccccccccccccccEEEEEEEEEEEEEcccccccEEEEEEEEcccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHcccccccccccccccccEEEcccccccHHHHccccccccccEEEEEccccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHccccccccccccccccccHHHHHHHHHccccccEEEEEHHHHHcccccHHHHHHHHHccccccccccEEcccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccEEEccccEcccccEEEcccccEEEccccccHHHHHHcccHHHHHccccccccccccEccccccccEEEEcccccccccEccccccccccccccccccccccccEEEEccccccccccccccccccHHHHHEEEEEcccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcccccccccccccccccEEEEEEEEEEEEEccccccEEEEEEEEEcccccccccccccccccccccccHHHHHEccccccccccccccccccccccccccccHHHHcccccccccccccccHcccccccEEEEEEEEcccccccHHcccccccHHHHHccccccccccccccccccccccccccccEEEEEEEcccccccccccccccHHHHHHHcccccccccccccccEEEEcccccccccccccccccccccEEEEEEcccccccEEEEEEccccEEEEEEcccHHHHHHHHHHHHHHHccccccccHHccc
Coil and Loop (DISEMBL)
menklgntrndgqgkedSLDSLGKELevsgdngldsselkSRRLVKRVNSQQTLILNVKQLFSSRssiknffcrsthgldtkipkhmvTLDERYLRRCLELIHKSASKAAQcnisvdlgsakmgfmwdDMNVAkcrtenacdsarfifecpmitgsesvvispagqwiVGSIMGSKSMINILKspllsklgkldgdgnfrrtsvndvkgsisydfmkspggfsgyspqkiEKQTwmlgnhkhgseTAHKRLasasstnstcsdqssssaststSLGVLQcmwdggnphfvfsidDRKEVFVANlsnsesgnsksmDYMYSFhwrkggqkeheicdneslLVGKMKVSISfnlcpdnskimetqftlfgsnedfgggmqTSRQAARKNKGLSKKVVDAFRTTHsfkrrtlskfggssailensswepcqnlggnddsLGAACLlenhlppnlELAAIIVKehlpenrqeevggwGMKFLKKVGIKKTVEtlktsapsasfardtggcstsmdilipagfhggprtrnggpsgiierwrsggccdcggwdlgcpltvlgtrlskkEAIYQadmhdecnsfdlfvngskqgapmlrmvnvrDDLYFIHFHSTLSALQSFSIAVASIhsqsptlrpknvqs
Flexible Loop (DISEMBL)
menklgntrndgqgkedSLDSLGKELEvsgdngldsselksrrlvkrvnsqqTLILNVKQLFSSRSSIKNFFCrsthgldtkipkhmvTLDERYLRRCLELIHKsaskaaqcnISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGkldgdgnfrrtsvndvkgsisYDFMKSPGGFSGYSPQKIEKQTWMLGNHKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANlsnsesgnsksMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAarknkglskkvvdafrtthsfkrrtlskfggsSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPenrqeevggwgMKFLKKVGIKKTVetlktsapsasfardtggCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIhsqsptlrpknvqs
Low Complexity Region (SEG)
MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINIlkspllsklgkldgdgNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNHKHGSETAHKRLasasstnstcsdqssssaststsLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILENSSWEPCQNLGGNDDSLGAACllenhlppnlelAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSggccdcggwdlgcPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNVQS
Disordered region (IsUnstruct)
**************************************************QQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDF***********************************************************LGVLQCMWDGGNPHFVFSIDDRKEVFVANL***********DYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFG****************************AFR*****************AILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETL*************GGCSTSMDILIPAGFHGGP****GGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASI**************
Disordered Region (DISOPRED)
**********************************************************************FFCRSTHG******************RCLELIHKSAS**************KMGFMWDDM*****R*ENACDSARFIFE*****************WI************************************************************************************************************VLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFH******************VGKMKVSISFNL*P***KIMETQFTLFGSNE**********************************************************************LLENHLPPNLELAAIIVK**************************************************MDILIPAGF***************ERWRSGGCCDCGGWDLGCPLTVLGTR*********************FVNG*KQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIH*************
Disordered Region (DISEMBL)
******************LDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH**********************************LGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGG****************KKVVDAFRTTHSFKRRTLSKFGGSSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASI**************
Disordered Region (DISPRO)
******************************************RLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSP*********************K******************SASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRK**********NESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSN****************************************************SW*********DDSLGAACLLENHLPPNLELAAIIVKEHLPEN*********M*****************************GCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRL*************ECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPT********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNHKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNVQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	637
225433251	642	PREDICTED: uncharacterized protein LOC10	0.992	0.984	0.611	0.0
255574909	637	conserved hypothetical protein [Ricinus	0.996	0.996	0.604	0.0
224110636	615	predicted protein [Populus trichocarpa]	0.946	0.980	0.592	0.0
147864336	597	hypothetical protein VITISV_003699 [Viti	0.935	0.998	0.584	0.0
224102229	607	predicted protein [Populus trichocarpa]	0.948	0.995	0.577	0.0
356574736	624	PREDICTED: uncharacterized protein LOC10	0.965	0.985	0.512	1e-172
449433227	634	PREDICTED: uncharacterized protein LOC10	0.940	0.944	0.470	1e-148
15226101	603	uncharacterized protein [Arabidopsis tha	0.899	0.950	0.409	1e-107
297823129	601	hypothetical protein ARALYDRAFT_902408 [	0.908	0.963	0.405	1e-107
356533808	409	PREDICTED: uncharacterized protein LOC10	0.638	0.995	0.466	2e-83

>gi|225433251|ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera] gi|296083723|emb|CBI23712.3| unnamed protein product [Vitis vinifera]

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/636 (61%), Positives = 474/636 (74%), Gaps = 4/636 (0%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           MENK  N   DGQ KED L+SLG++ E +  N LD SE KS+RL ++  S+Q +ILNVK+
Sbjct: 10  MENKFVNGPKDGQVKEDMLNSLGEDRESAQGNDLDFSESKSKRLARKGRSEQAVILNVKK 69

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
           L  SR S+K      THGL+ ++PKH+++LDERYLRRCLELIH SASKAA CNIS++L S
Sbjct: 70  L-QSRGSVK--VESFTHGLNNRMPKHIMSLDERYLRRCLELIHISASKAAPCNISLNLSS 126

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMIN 180
            KMG   D +N+ K R  N CD ++ + ECP+ TG+  VV+SPAGQW+VG++MGSKSM+ 
Sbjct: 127 LKMGIFSDTLNLPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMK 186

Query: 181 ILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH 240
           ILKSPL  + G L+ D  F  TS+ D KG++  DF+ SPGG S  SPQ + K     GNH
Sbjct: 187 ILKSPLFRQFGALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNH 246

Query: 241 KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVF 300
           ++G E  HKRL S SSTNSTCSDQS SS   + S G+LQC W GG PHFVFS+DD++EV+
Sbjct: 247 RYGPEAVHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVY 306

Query: 301 VANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIM 360
           VAN   +E  + K++D MY FH R GGQKEH+I DN++ LVGKMKVS SF LCP++SKIM
Sbjct: 307 VANQWKAELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPNDSKIM 366

Query: 361 ETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILE 420
           ET+F  FG  E++   MQTS    RKNKGLSKKVV+ FRT+HS K+RT SKFGG++AILE
Sbjct: 367 ETEFVFFGGRENYASKMQTSSSIIRKNKGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILE 426

Query: 421 NSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQE-EVGGWGMKFLK 479
           N SWE CQ+   N  +LG   LLEN LPPNLELAAI+VK+HLP  RQE EVGGWG+KFLK
Sbjct: 427 NDSWEQCQDTCNNPSALGRTNLLENDLPPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLK 486

Query: 480 KVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSG 539
           KVG+K+   +L+ S PS    R TG CSTSMDIL+PAG HGGPRTRNGGPS +IERWRSG
Sbjct: 487 KVGLKQNSASLEASLPSECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSG 546

Query: 540 GCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRD 599
           G CDCGGWD+GCPLTVL TR +K+E  +  D+ +E  SFDLF  GS+  AP+LR+VNV D
Sbjct: 547 GHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGSELSAPILRVVNVHD 606

Query: 600 DLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNV 635
            LYFIHF S LSALQSFSIAVA IH++SP LRPK V
Sbjct: 607 GLYFIHFRSMLSALQSFSIAVAIIHTRSPILRPKTV 642

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574909|ref|XP_002528361.1| conserved hypothetical protein [Ricinus communis] gi|223532229|gb|EEF34033.1| conserved hypothetical protein [Ricinus communis]

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/637 (60%), Positives = 460/637 (72%), Gaps = 2/637 (0%)

Query: 1   MENKLGNTRNDGQGKEDSLD-SLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVK 59
           ME+ L   +  G  +EDS   S   +  V GD+ L  SE +S+RLV+RVNSQ TL+   K
Sbjct: 1   MEDTLAGAKRGGHSREDSSSYSFNHDEGVLGDDELHCSESRSKRLVRRVNSQNTLVSKFK 60

Query: 60  QLFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLG 119
           QL  SRS IK  F RS   LD  IPKHMVT+DE+YLRRCLE+IH S SK    ++S++LG
Sbjct: 61  QLQRSRSYIKESFLRSIRVLDNWIPKHMVTVDEKYLRRCLEIIHVSTSKEVPRDLSLNLG 120

Query: 120 SAKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMI 179
             +MG + D ++ AK  +EN CD  RF F+CP+ +G  SVVISPAG WIVGSIMGSKSM+
Sbjct: 121 WGEMGVLSDGLSPAKIGSENTCDFTRFHFDCPLASGDGSVVISPAGHWIVGSIMGSKSMV 180

Query: 180 NILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGN 239
           NIL SPL  K G  DGD NF + S +DV GSI Y+FM SP     YS  K+ K+T + G 
Sbjct: 181 NILNSPLFRKYGAYDGDANFEKVSFSDVDGSICYNFMNSPSVLGSYSSNKLYKETPIPGK 240

Query: 240 HKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEV 299
            ++ SET ++R  S SSTNSTCSDQSSSS S + S G+LQC W+ GNPHFVFS+DD+K V
Sbjct: 241 QRYRSETLNERPVSMSSTNSTCSDQSSSSLSGTVSQGMLQCTWEDGNPHFVFSLDDQKVV 300

Query: 300 FVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKI 359
           +VANL NS+  +   +DY Y FH RKG QKE EI D ES LVGKMKVS SF+LC +NSKI
Sbjct: 301 YVANLWNSQLADDIVVDYTYLFHLRKGDQKESEIHDTESHLVGKMKVSTSFSLCQNNSKI 360

Query: 360 METQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAIL 419
           ME +F LFGSNE+    MQTS    RKNKGLSKKV + FRT+HS K+RT+S+  GSSAIL
Sbjct: 361 MEREFILFGSNENV-KRMQTSSHDLRKNKGLSKKVAEVFRTSHSMKKRTISRLTGSSAIL 419

Query: 420 ENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLK 479
           E+ SWEP Q+   N D+     LLE HLPPNLE+AAI+VKEH+PE R+E+ GGWG+ FLK
Sbjct: 420 ESCSWEPLQDTENNIDAHSGVNLLEKHLPPNLEMAAIVVKEHIPEKRREKGGGWGLNFLK 479

Query: 480 KVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSG 539
           K   K+T + +++S    S AR+TG CSTS+DILIP   HGGPRTRNGGPSG+ ERW+SG
Sbjct: 480 KSSAKQTTDLMESSQHYGSCARNTGDCSTSIDILIPVSLHGGPRTRNGGPSGLTERWKSG 539

Query: 540 GCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRD 599
           GCCDCGGWDLGCPLTVL +RLS KE   QADM  EC   DL   GS+  AP +RMVNV D
Sbjct: 540 GCCDCGGWDLGCPLTVLKSRLSNKELSPQADMQGECKLIDLITQGSENSAPQMRMVNVHD 599

Query: 600 DLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNVQ 636
            LYF+HF STLSALQSFSIAVA IHSQSPTLRP NVQ
Sbjct: 600 GLYFVHFQSTLSALQSFSIAVAFIHSQSPTLRPDNVQ 636

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110636|ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1| predicted protein [Populus trichocarpa]

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/626 (59%), Positives = 446/626 (71%), Gaps = 23/626 (3%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           M++   N + DG GKEDSL SL  + E+SGD+ LD                       KQ
Sbjct: 1   MDDTFANAQKDGLGKEDSLHSLSHDRELSGDHELD----------------------FKQ 38

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
           L  S+S IK+ F RS H LD  IPKH++T+DE+YLRRCLE IH S S+AA CN S+ L  
Sbjct: 39  LQRSKSCIKDSFLRSIHVLDNWIPKHIITIDEKYLRRCLEFIHASTSQAAPCNASMYLDW 98

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMIN 180
             MGF  D +N+AK   +N C SA F F+CP+  G+ SVVISPA QWI GSIMGSKSM+N
Sbjct: 99  GNMGFFSDGLNIAKIGNQNTCSSAGFDFDCPL-AGTGSVVISPAEQWIAGSIMGSKSMVN 157

Query: 181 ILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH 240
           ILKSPLL + G  DGD NF + + +DVKGSI YDFM SPGG S YSP K++      G+H
Sbjct: 158 ILKSPLLRRYGAYDGDANFEKVTSSDVKGSICYDFMNSPGGLSSYSPHKLDNGAQTPGSH 217

Query: 241 KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVF 300
           K+ SE+ HKR  S SSTNSTCSDQSSSS   + + G LQC W GGNPHF+FS+DD+K V+
Sbjct: 218 KYESESLHKRFVSMSSTNSTCSDQSSSSLPAAVTQGTLQCTWKGGNPHFIFSLDDQKVVY 277

Query: 301 VANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIM 360
           VAN  N  S + K+++Y+Y FH RKGGQKEH I D ES LVG+M VS SF+LCP+N +IM
Sbjct: 278 VANFYNVNSADDKALEYVYLFHSRKGGQKEHMIHDKESRLVGQMNVSTSFSLCPNNCRIM 337

Query: 361 ETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILE 420
           E +F LFG  E+  G +Q+S    RKNK LS +VV+ FRT +SFK+RT S+F GS AILE
Sbjct: 338 EREFVLFGCYENLVGELQSSSHDLRKNKRLSSRVVEVFRTNNSFKKRTNSRFDGSGAILE 397

Query: 421 NSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKK 480
           NSSWEP Q    N D+LG A LLENHLPPNLELAAI+VK HLPE R E+ GGWG+ FLK 
Sbjct: 398 NSSWEPFQEREYNMDALGGANLLENHLPPNLELAAILVKNHLPEKRPEKTGGWGLNFLKN 457

Query: 481 VGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGG 540
             + +  +T+K+S  SAS ARDTG CSTS+DILIPAG HGGPRTRNGGPS +I+RWRSGG
Sbjct: 458 TAVTQAKDTMKSSVLSASCARDTGDCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWRSGG 517

Query: 541 CCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDD 600
            CDCGGWDLGCPLTVL +R + KE    ADM  EC   +LF+ GS+ GAP LRMVNV D 
Sbjct: 518 YCDCGGWDLGCPLTVLKSRSANKEFSSSADMQGECKLINLFIQGSENGAPPLRMVNVHDG 577

Query: 601 LYFIHFHSTLSALQSFSIAVASIHSQ 626
           +Y +HF STLSALQ+FSIA+A IHSQ
Sbjct: 578 MYSVHFQSTLSALQTFSIALAFIHSQ 603

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864336|emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/636 (58%), Positives = 448/636 (70%), Gaps = 40/636 (6%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           MENK  N   DGQ KED L+SLG++ E +  N LD SE KS+R+                
Sbjct: 1   MENKFVNGLKDGQVKEDMLNSLGEDRESAQGNDLDFSESKSKRM---------------- 44

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
                                  PKH+++LDERYLRRCLELIH SASKAA CNIS++L S
Sbjct: 45  -----------------------PKHIMSLDERYLRRCLELIHISASKAAPCNISLNLSS 81

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMIN 180
            KMG   D +N+ K R  N CD ++ + ECP+ TG+  VV+SPAGQW+VG++MGSKSM+ 
Sbjct: 82  LKMGIFSDTLNLPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMK 141

Query: 181 ILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH 240
           ILKSPL  + G L+ D  F  TS+ D KG++  DF+ SPGG S  SPQ + K     GNH
Sbjct: 142 ILKSPLFRQFGALEDDVKFGGTSLIDAKGAMCTDFISSPGGLSIRSPQNLPKGNISQGNH 201

Query: 241 KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVF 300
            +G E  HKRL S SSTNSTCSDQS SS   + S G+LQC W GG PHFVFS+DD++EV+
Sbjct: 202 IYGPEAVHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVY 261

Query: 301 VANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIM 360
           VAN   +E  + K++D MY FH R GGQKEH+I DN++ LVGKMKVS SF LCP++SKIM
Sbjct: 262 VANQWKAELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPNDSKIM 321

Query: 361 ETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILE 420
           ET+F  FG  E++   MQTS    RKNKGLSKKVV+ FRT+HS K+RT SKFGG++AILE
Sbjct: 322 ETEFVFFGGRENYASKMQTSSSIIRKNKGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILE 381

Query: 421 NSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQE-EVGGWGMKFLK 479
           N SWE CQ+   N  +LG   LLEN LPPNLELAAI+VK+HLP  RQE EVGGWG+KFLK
Sbjct: 382 NDSWEQCQDTCNNPSALGRTNLLENDLPPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLK 441

Query: 480 KVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSG 539
           KVG+K+   +L+ S PS    R TG CSTSMDIL+PAG HGGPRTRNGGPS +IERWRSG
Sbjct: 442 KVGLKQNSASLEASLPSECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSG 501

Query: 540 GCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRD 599
           G CDCGGWD+GCPLTVL TR +K+E  +  D+ +E  SFDLF  GS+  AP+LR+VNV D
Sbjct: 502 GHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGSELSAPILRVVNVHD 561

Query: 600 DLYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNV 635
            LYFIHF S LSALQSFSIAVA IH++SP LRPK V
Sbjct: 562 GLYFIHFRSMLSALQSFSIAVAIIHTRSPILRPKTV 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102229|ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1| predicted protein [Populus trichocarpa]

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/635 (57%), Positives = 445/635 (70%), Gaps = 31/635 (4%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           M++   N + DGQGKEDSL SL    E+S                            VKQ
Sbjct: 1   MDDTSANAQKDGQGKEDSLHSLNHGRELS----------------------------VKQ 32

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
           L  S+S IK+ F R  H LD  IPKH+ T+DE+YLRRCLE IH S S++A CN S+ L  
Sbjct: 33  LQRSKSCIKDSFLRGIHVLDNWIPKHITTIDEKYLRRCLEFIHASTSQSAPCNASMHLDW 92

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMIN 180
             MGF  D +N+AK  +EN    ARF F+CP+  G+ +VVISPA QWIVGSIMGSKSM+N
Sbjct: 93  GNMGFFSDGLNIAKTGSENTYGLARFDFDCPL-AGTGNVVISPAEQWIVGSIMGSKSMVN 151

Query: 181 ILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH 240
           ILKSPLL + G  DGD NF + S ++VKG I ++ M SP G   YSP K++K+  + G+H
Sbjct: 152 ILKSPLLLRYGSYDGDANFEKVSSSEVKGPICFNLMNSPSGLRSYSPHKLDKEAQIPGSH 211

Query: 241 KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKEVF 300
           K GSET HKRL S SS+NSTCSDQSSSS S S + G LQC W GGNPHFVFSID++K V+
Sbjct: 212 KFGSETLHKRLISMSSSNSTCSDQSSSSPSASVTQGTLQCTWKGGNPHFVFSIDNQKLVY 271

Query: 301 VANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSKIM 360
           VANL N +S + K+++Y+Y FH RKG QKEH   D ES LVGKMKVS SF LCP NS+I 
Sbjct: 272 VANLYNVDSADDKALEYVYLFHSRKGSQKEHMNHDKESHLVGKMKVSTSFALCPKNSRIT 331

Query: 361 ETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILE 420
           + +F LFG  E++ G  Q+S    RKNKGLS +V + FRT++S KRRT S+FGGS AILE
Sbjct: 332 QREFVLFGY-ENYVGEWQSSSHDLRKNKGLSSRVAEVFRTSNSSKRRTNSRFGGSGAILE 390

Query: 421 NSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKK 480
           NSSWEP Q    N D+LG   LLENHLPPNLELAAI+VK+HLPE RQE+ GGWG+ FLKK
Sbjct: 391 NSSWEPFQERDNNIDALGGTNLLENHLPPNLELAAILVKDHLPEKRQEKAGGWGLNFLKK 450

Query: 481 VGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGG 540
           + + +  E +K+S   A  A+D+G CSTS+DILIPAG HGGPRTRNGGPS +I+RW SGG
Sbjct: 451 MAVTQ-AEDVKSSVLPACCAQDSGDCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWISGG 509

Query: 541 CCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDD 600
            CDCGGWDLGCPLTVL +R + KE   QAD   EC   DLF+ GS+ GAP + MVNV D 
Sbjct: 510 HCDCGGWDLGCPLTVLKSRSAHKEFSSQADTQGECKLVDLFIEGSENGAPPMSMVNVHDG 569

Query: 601 LYFIHFHSTLSALQSFSIAVASIHSQSPTLRPKNV 635
           LYF+HF STLSALQSFSIAVA IH+Q   +  +N+
Sbjct: 570 LYFVHFQSTLSALQSFSIAVAFIHTQKVPVSNQNM 604

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574736|ref|XP_003555501.1| PREDICTED: uncharacterized protein LOC100814338 [Glycine max]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 325/634 (51%), Positives = 420/634 (66%), Gaps = 19/634 (2%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           MEN     + +G G++DSL  L  + E+S +   DSS+ + ++L+KR NS + +++N  Q
Sbjct: 1   MENTGLWIQKEGHGRKDSLRGLLNDREISEEE--DSSKSQLKKLIKRSNSHRAIVVNAIQ 58

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
              S+  +K+ F +  HGLD +IPKH+V++DE+Y+ RCLE IH +A KAAQ NI   L +
Sbjct: 59  SQISKVFLKDLFVQRVHGLDNRIPKHVVSVDEKYIHRCLEFIHNTALKAAQFNIPESLRA 118

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISP-AG-QWIVGSIMGSKSM 178
             M  + + +N AK    NAC S  F+FECP++T +  VVIS  AG QW +G+IMGSKSM
Sbjct: 119 TNMETLSESLNTAKFFGGNACGSGHFVFECPVVTETGRVVISANAGDQWTLGTIMGSKSM 178

Query: 179 INILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLG 238
           INIL S LL + G      N  R + +D +G + YDFM SP      S  K+EK+  ++ 
Sbjct: 179 INILNSTLLQQFGASHRTDNLNRMNFSDPEGLVCYDFMDSPSDLCISSSYKLEKEKQLVR 238

Query: 239 NHKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKE 298
           +HK+G  + HKRL S SST STCSD  SS++S + S G++QC W  G PHFVFS DD+KE
Sbjct: 239 SHKYGPISVHKRLVSTSSTTSTCSDWLSSTSS-NLSQGMIQCTWKQGIPHFVFSADDQKE 297

Query: 299 VFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSK 358
           V+V  L   +S ++K++DY+Y FH  KGGQK  EI D +   VGKM VS SF LCP+N +
Sbjct: 298 VYVTKLRKVDSTDNKALDYVYEFHLNKGGQKGREIPDGDLPFVGKMHVSTSFTLCPNNCR 357

Query: 359 IMETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAI 418
           I ET+FTLF + E     M  S  A RK+KGLSKKV   F+T+ S KRRTLSKFGGSSAI
Sbjct: 358 IRETEFTLFHNIEISDKEMSASEHAHRKSKGLSKKVSKVFKTSPSSKRRTLSKFGGSSAI 417

Query: 419 LENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFL 478
            E+  WEP         +LG   LL+  +PPN+E+AA++VK HLP  + E+VGGWG+KFL
Sbjct: 418 SESCPWEPY--------ALGGTNLLDTDVPPNIEMAAVVVKNHLPCKKPEKVGGWGLKFL 469

Query: 479 KKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRS 538
            K G  +       + PS S  ++ G CSTS  ILIPAG HGGPRTRNGGPS +I+RWRS
Sbjct: 470 NKSGENQV------TLPSESCNQNNGNCSTSTSILIPAGLHGGPRTRNGGPSSLIDRWRS 523

Query: 539 GGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVR 598
           GG CDCGGWD GCPLTVL  R +K + + + D  DEC S DL   GS   +P LRMVNV 
Sbjct: 524 GGHCDCGGWDEGCPLTVLERRSNKADVMSKIDTQDECKSVDLVTQGSSDYSPTLRMVNVH 583

Query: 599 DDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRP 632
           D LY+IHFH  LSALQSFSI VA IH+QSPTL+P
Sbjct: 584 DGLYYIHFHPPLSALQSFSIVVAIIHAQSPTLQP 617

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433227|ref|XP_004134399.1| PREDICTED: uncharacterized protein LOC101209831 [Cucumis sativus] gi|449486758|ref|XP_004157393.1| PREDICTED: uncharacterized LOC101209831 [Cucumis sativus]

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/610 (47%), Positives = 390/610 (63%), Gaps = 11/610 (1%)

Query: 29  SGDNGLDSSELKSRRLVKRVNSQQTLILNVKQLFSSRSSIKNFFCRSTHGLDTKIPKHMV 88
           +GD GL    + SR L K++     L L +KQ   SRS + + F     GLD K+PK+MV
Sbjct: 31  NGDLGLSKYSI-SRGLNKKLMLPHALYLKLKQNRISRSYVHDSFFNCNIGLDYKVPKYMV 89

Query: 89  TLDERYLRRCLELIHKSASKAAQCNISVDLGSAKMGFMWDDMNVAKCRTENACDSARFIF 148
           T+DE+YLRRCLELI  SA KAA+CN S+ L S K G + + ++V K +T       RFI 
Sbjct: 90  TIDEKYLRRCLELIQTSALKAARCNESISLSSVKTGALTESLSVDKLQTRGMAHMERFII 149

Query: 149 ECPMITGSESVVISPAGQWIVGSIMGSKSMINILKSPLLSKLGKLDGDGNFRRTSVNDVK 208
            CP      + V+S    W VGSIMGSKSMINILKSPLL +LG  +   N  R  +ND+K
Sbjct: 150 TCPSAGEDSNTVLSSNKMWFVGSIMGSKSMINILKSPLLHQLGITEETSNLIRMDLNDIK 209

Query: 209 GSISYDFMKSPGGFSGYSPQKIEKQTWMLGNHKHGSETAHKRLASASSTNSTCSDQSSSS 268
           G    +FM SPG     S + ++       +H+ GS+ A++R  S  S NS CSDQSSS 
Sbjct: 210 GFTGSNFMDSPGDVDISSLKNLDNTK--PESHQDGSDAANERFFSTPSRNSLCSDQSSSG 267

Query: 269 ASTST-SLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGG 327
           +++++   G+LQ  W  G+P+F+FS+DD KEV+VA+ S   S ++ ++DY+Y F   K G
Sbjct: 268 SASTSLCQGMLQFTWKDGSPYFIFSVDDEKEVYVASSSKVTSADNNALDYVYLFCSAKSG 327

Query: 328 QKEHEICDNESLLVGKMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAARKN 387
            K+HE+ ++   +VGKM VS S+ +C +NSKI +T+F LFG  E+    +  S    +KN
Sbjct: 328 LKDHEVRNSRPCIVGKMTVSTSYGVCSNNSKIADTEFVLFGGIENSDLEISPSNTVLKKN 387

Query: 388 KGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILENSSWEPCQN-LGGNDDSLGAACLLENH 446
           K   +KV + FRT++S K R +     SS + +   WEP  + L  +DD + A       
Sbjct: 388 KVFPRKVAEVFRTSNSSKHRNIPNLNRSSVMKDFCPWEPYSDKLNSSDDLICA-----RD 442

Query: 447 LPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGC 506
           LPPNLELAAI+V++HLPE+    VGGWG+KFLK+   K+T  +L TS  +    R++G C
Sbjct: 443 LPPNLELAAIVVRDHLPEDHGSRVGGWGLKFLKQAKAKQTNNSLDTSVQADCCVRNSGKC 502

Query: 507 STSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAI 566
           STSMDILIPAG HGGPRTRNGGPS + ERW+SGG CDCGGWD+GCPLT+L  +    + +
Sbjct: 503 STSMDILIPAGLHGGPRTRNGGPSTLKERWKSGGVCDCGGWDIGCPLTILEGQSVNDDTL 562

Query: 567 YQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQ 626
            QAD   EC +F++   G +   P LRMVN+RD LYF+HF   LS+LQ FSIAVA +HS+
Sbjct: 563 RQADTQ-ECRAFNIHAKGYENSPPTLRMVNIRDGLYFVHFQPKLSSLQCFSIAVAIVHSR 621

Query: 627 SPTLRPKNVQ 636
           SP+L+P+NVQ
Sbjct: 622 SPSLKPRNVQ 631

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226101|ref|NP_180894.1| uncharacterized protein [Arabidopsis thaliana] gi|2459419|gb|AAB80654.1| hypothetical protein [Arabidopsis thaliana] gi|219291116|gb|ACL13991.1| At2g33360 [Arabidopsis thaliana] gi|330253728|gb|AEC08822.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 266/649 (40%), Positives = 370/649 (57%), Gaps = 76/649 (11%)

Query: 5   LGNTRNDGQGKEDSL-DSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNV-KQLF 62
           +G+   D Q  +  L DSL  +  +SG NGL    LKS  L+ +   Q +L+ N  K L 
Sbjct: 1   MGSVSPDAQKDDLELEDSLNIDENLSGGNGL----LKSGNLLSQKRQQCSLVSNSGKWLQ 56

Query: 63  SSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAK 122
             ++  K  F R+T   D KIP+ +V++DE+YLRRCL+LI+ SA K+A C++S++L  +K
Sbjct: 57  IVKNGPKGSFSRATSFFDNKIPRQLVSVDEKYLRRCLDLINISAFKSASCSLSLNLVGSK 116

Query: 123 MGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINIL 182
           M       ++     EN    AR +F+ P++  S S VIS A       I+G K +  +L
Sbjct: 117 MSLSSRRFDLPVIPKENV---ARLVFDLPLVDDSGSPVISRA-------IIGCKRVTYML 166

Query: 183 KSPLLSKLGKLDGDGNF--RRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQ----TWM 236
             P L  L  LDGDGN    R   N     +SYD ++           KIE++    +  
Sbjct: 167 DKPTLHSLEALDGDGNNIGTRRDHNGESELVSYDVVR-----------KIEEKNTPDSQF 215

Query: 237 LGNH--KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQ-CMWDGGNPHFVFSI 293
           L  H      +       ++ S++S+    SS S S+S S G LQ  M D   PHFVFS+
Sbjct: 216 LSYHSGNMPRKAVSLSSTNSLSSSSSEQSSSSWSPSSSVSQGTLQFTMKDNKTPHFVFSL 275

Query: 294 DDRKEVFVANLSNSESG---NSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISF 350
           DD+KE++VA+LS +  G   +  S+DY Y  H +KG   E +       LVGK+KVS  F
Sbjct: 276 DDQKEIYVASLSTTSVGSGFDRSSLDYSYLIHLKKGRGSEPQ------HLVGKLKVSTLF 329

Query: 351 NLCPDNSKIMETQFTLFGSNEDFGGGMQTS-RQAARKNKGLSKKVVDAFRTT-HSFKRRT 408
           ++   N K +E QF LF S    GG  Q    +  RKN+GL KKVVDA ++T  + ++R+
Sbjct: 330 SVSSTNEKTVERQFVLFSS----GGNPQLPCHKDIRKNRGLPKKVVDALKSTKRTSRQRS 385

Query: 409 LSKFGGSSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQE 468
           +S+F  +S+I +  SWEP Q    +D  L    LL+N LPPNLE +A++V+E  P   +E
Sbjct: 386 ISRFSRTSSIPDFCSWEPFQE---HDSDLEPISLLDNDLPPNLETSAVVVREQFPVEEEE 442

Query: 469 -----EVGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPR 523
                +VGGWGMKFLKK+ + +T +  K S             STS+D++IP G HGGPR
Sbjct: 443 EEEVEKVGGWGMKFLKKIPLARTKDASKCSK-----------HSTSIDVVIPLGIHGGPR 491

Query: 524 TRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVN 583
            RNGGPS +I+RW+SGGCCDC GWDLGCPLTVL  +  K ++        +CN F+LF  
Sbjct: 492 NRNGGPSSLIQRWKSGGCCDCSGWDLGCPLTVLKGQARKDQS------EGQCNLFELFTE 545

Query: 584 GSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRP 632
           G  QG+P LR++NVRD LYF+   + +S LQSFSIA+A IHSQS  LRP
Sbjct: 546 GLMQGSPGLRIMNVRDGLYFVQSQAKISVLQSFSIALAYIHSQSQRLRP 594

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823129|ref|XP_002879447.1| hypothetical protein ARALYDRAFT_902408 [Arabidopsis lyrata subsp. lyrata] gi|297325286|gb|EFH55706.1| hypothetical protein ARALYDRAFT_902408 [Arabidopsis lyrata subsp. lyrata]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 260/641 (40%), Positives = 366/641 (57%), Gaps = 62/641 (9%)

Query: 5   LGNTRNDGQGKEDSL-DSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNV-KQLF 62
           +G+   D Q  +  L DSL  +  +SG+NGL    LKS  L+     Q +L+ N  K L 
Sbjct: 1   MGSVTPDAQKDDPELEDSLNIDENLSGENGL----LKSVNLLSPKRQQCSLVSNSGKWLQ 56

Query: 63  SSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAK 122
             ++  K  F R+T   D KIP+ +V++DE+YLRRCL+LI+ SA K+A C++S++L  +K
Sbjct: 57  IVKNGPKGSFSRATSFFDNKIPRQLVSIDEKYLRRCLDLINISAFKSASCSLSLNLVGSK 116

Query: 123 MGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINIL 182
           M       +      EN    AR +F+ P++  S S VIS A       I+G K +  +L
Sbjct: 117 MSLSSRHFDSPVIPKENV---ARLVFDLPLVDDSGSPVISRA-------IIGCKRVTYML 166

Query: 183 KSPLLSKLGKLDGDG--NFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNH 240
             PLL  L  LDGDG  +  R   N     +S D ++            ++ Q++  GN 
Sbjct: 167 DKPLLHDLEGLDGDGMNSGTRRDHNGENELVSCDVVRK---IEEKDTPDLQFQSYQSGNM 223

Query: 241 KHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQ-CMWDGGNPHFVFSIDDRKEV 299
               +       ++ S++S+    S  S S+S S G LQ  M D   PHFVFS+DD+KE+
Sbjct: 224 PQ--KAVSLSSTNSMSSSSSEQSSSGWSPSSSVSQGTLQFIMKDNKTPHFVFSLDDQKEI 281

Query: 300 FVANLSNSESG---NSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDN 356
           +VA+L+ +  G   +  S+DY Y  H +KG   E +       LVGK+KVS  F++   N
Sbjct: 282 YVASLTTTSVGSGFDRSSLDYSYLIHLKKGRGSELQ------HLVGKLKVSTLFSVSSTN 335

Query: 357 SKIMETQFTLFGSNEDFGGGMQTS-RQAARKNKGLSKKVVDAFRTT-HSFKRRTLSKFGG 414
            K +E QF LF S    GG  Q       RKN+GL KKVVDA ++T  + ++R++S+F  
Sbjct: 336 EKTVERQFVLFSS----GGNPQLQCHNDIRKNRGLPKKVVDALKSTKRTSRQRSISRFSR 391

Query: 415 SSAILENSSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQE---EVG 471
           +S+I E  SWEP Q    +++ L    LL+N LPPNLE +A++V+E  P   +E   +VG
Sbjct: 392 TSSIPEFCSWEPFQE---HENDLEPVSLLDNDLPPNLETSAVVVREQFPVEEEEEVEKVG 448

Query: 472 GWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSG 531
           GWGMKFLKK+ + +  +  K S             STS+D++IP+G HGGPR RNGGPS 
Sbjct: 449 GWGMKFLKKMPLARAKDASKNSK-----------LSTSIDVVIPSGIHGGPRNRNGGPSS 497

Query: 532 IIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECNSFDLFVNGSKQGAPM 591
           +I+RW+SGGCCDC GWDLGCPLTVL  R  K +         +CN F+LF  G  QG+P 
Sbjct: 498 LIQRWKSGGCCDCSGWDLGCPLTVLKGRARKDQN------EGQCNLFELFTEGMMQGSPG 551

Query: 592 LRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSPTLRP 632
           LR++NVRD L+F+   + +S LQSFSIA+A IHSQS  LRP
Sbjct: 552 LRIMNVRDGLFFVQSQAKISVLQSFSIALAYIHSQSQRLRP 592

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533808|ref|XP_003535450.1| PREDICTED: uncharacterized protein LOC100802721 [Glycine max]

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 193/414 (46%), Positives = 262/414 (63%), Gaps = 7/414 (1%)

Query: 1   MENKLGNTRNDGQGKEDSLDSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNVKQ 60
           MEN     + +G+ ++DSL  L   L     +  +SS+ + ++L+KR NS + +++N  Q
Sbjct: 1   MENTCLWIQKEGRRRKDSLHGL---LNDREISEEESSKSQLKKLIKRSNSHRAIVVNAIQ 57

Query: 61  LFSSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGS 120
              S+   K+ F R  HGLD +IPKH+V++DE+Y+RRCLE IH +A KAAQ NI   L +
Sbjct: 58  SQISKVFFKDLFFRRVHGLDNRIPKHVVSVDEKYIRRCLEFIHNTALKAAQFNIPESLRA 117

Query: 121 AKMGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISP-AG-QWIVGSIMGSKSM 178
             M  + + +N  K    NAC    F+FECP+ T +  VVIS  AG QW +GSIMGSKSM
Sbjct: 118 TNMETLSESLNTVKFFGGNACGLGHFVFECPVATENGRVVISANAGDQWTLGSIMGSKSM 177

Query: 179 INILKSPLLSKLGKLDGDGNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLG 238
           INIL S LL + G      N  R + +D +G + YDFM SP      S  K+ K+  ++ 
Sbjct: 178 INILNSTLLQQFGASHRTDNLNRMNFSDPEGLVCYDFMDSPSDLCISSSHKLGKEKQLVR 237

Query: 239 NHKHGSETAHKRLASASSTNSTCSDQSSSSASTSTSLGVLQCMWDGGNPHFVFSIDDRKE 298
           +HK+GS + HKRL S SST ST SD  SS++ST +  G++QC W  G PHFVFS DD+KE
Sbjct: 238 SHKYGSISVHKRLVSTSSTTSTSSDWLSSTSSTLSQ-GMIQCSWKQGIPHFVFSADDQKE 296

Query: 299 VFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDNSK 358
           V+VA L   +S ++K++DY+Y FH  KGGQK  EI D +   VGKM VS SF LCP+N +
Sbjct: 297 VYVAKLKKVDSTDNKALDYVYEFHLNKGGQKGREIPDGDFPFVGKMHVSTSFTLCPNNCR 356

Query: 359 IMETQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKF 412
           I ET+FTLF + E     M TS  + RK+KGLS KV   F+T+ S KRRTLS++
Sbjct: 357 IRETEFTLFHNMEISDKEMSTSEHSHRKSKGLS-KVSKVFKTSPSSKRRTLSRY 409

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	637
TAIR|locus:2051109	603	AT2G33360 "AT2G33360" [Arabido	0.825	0.872	0.332	2.9e-64
TAIR|locus:2018299	401	AT1G04490 "AT1G04490" [Arabido	0.178	0.284	0.389	8e-21
TAIR|locus:2123106	694	AT4G11450 [Arabidopsis thalian	0.524	0.481	0.274	9.1e-15
TAIR|locus:2031393	528	AT1G63520 "AT1G63520" [Arabido	0.186	0.225	0.317	1.7e-12
TAIR|locus:2154553	780	AT5G59020 "AT5G59020" [Arabido	0.180	0.147	0.289	9.9e-06
TAIR|locus:2065644	467	AT2G37930 "AT2G37930" [Arabido	0.164	0.224	0.275	0.00037
TAIR|locus:2150029	744	AT5G01030 "AT5G01030" [Arabido	0.167	0.143	0.294	0.00052
TAIR|locus:2042972	839	AT2G29510 "AT2G29510" [Arabido	0.178	0.135	0.276	0.00087

TAIR|locus:2051109 AT2G33360 "AT2G33360" [Arabidopsis thaliana (taxid:3702)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 194/584 (33%), Positives = 284/584 (48%)

Query:     5 LGNTRNDGQGKEDSL-DSLGKELEVSGDNGLDSSELKSRRLVKRVNSQQTLILNV-KQLF 62
             +G+   D Q  +  L DSL  +  +SG NGL    LKS  L+ +   Q +L+ N  K L 
Sbjct:     1 MGSVSPDAQKDDLELEDSLNIDENLSGGNGL----LKSGNLLSQKRQQCSLVSNSGKWLQ 56

Query:    63 SSRSSIKNFFCRSTHGLDTKIPKHMVTLDERYLRRCLELIHKSASKAAQCNISVDLGSAK 122
               ++  K  F R+T   D KIP+ +V++DE+YLRRCL+LI+ SA K+A C++S++L  +K
Sbjct:    57 IVKNGPKGSFSRATSFFDNKIPRQLVSVDEKYLRRCLDLINISAFKSASCSLSLNLVGSK 116

Query:   123 MGFMWDDMNVAKCRTENACDSARFIFECPMITGSESVVISPAGQWIVGSIMGSKSMINIX 182
             M       ++     EN    AR +F+ P++  S S VIS A   I+G    +  M++  
Sbjct:   117 MSLSSRRFDLPVIPKENV---ARLVFDLPLVDDSGSPVISRA---IIGCKRVTY-MLDKP 169

Query:   183 XXXXXXXXXXXXXXXNFRRTSVNDVKGSISYDFMKSPGGFSGYSPQKIEKQTWMLGNHKH 242
                              RR   N     +SYD ++          +K    +  L  H  
Sbjct:   170 TLHSLEALDGDGNNIGTRRDH-NGESELVSYDVVRK-------IEEKNTPDSQFLSYHSG 221

Query:   243 GSETAHKRLXXXXXXXXXXXXXXXXXXXXXXXL--GVLQ-CMWDGGNPHFVFSIDDRKEV 299
                     L                       +  G LQ  M D   PHFVFS+DD+KE+
Sbjct:   222 NMPRKAVSLSSTNSLSSSSSEQSSSSWSPSSSVSQGTLQFTMKDNKTPHFVFSLDDQKEI 281

Query:   300 FVANLSNSESGNS---KSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDN 356
             +VA+LS +  G+     S+DY Y  H +KG   E +       LVGK+KVS  F++   N
Sbjct:   282 YVASLSTTSVGSGFDRSSLDYSYLIHLKKGRGSEPQH------LVGKLKVSTLFSVSSTN 335

Query:   357 SKIMETQFTLFGSNEDFGGGMQTS-RQAARKNKGLSKKVVDAFRTT-HSFKRRTLSKFGG 414
              K +E QF LF S    GG  Q    +  RKN+GL KKVVDA ++T  + ++R++S+F  
Sbjct:   336 EKTVERQFVLFSS----GGNPQLPCHKDIRKNRGLPKKVVDALKSTKRTSRQRSISRFSR 391

Query:   415 SSAILENSSWEPCQNLGGNDDSLGAACXXXXXXXXXXXXAAIIVKEHLPENRQEE----- 469
             +S+I +  SWEP Q    +D  L                +A++V+E  P   +EE     
Sbjct:   392 TSSIPDFCSWEPFQE---HDSDLEPISLLDNDLPPNLETSAVVVREQFPVEEEEEEEVEK 448

Query:   470 VGGWGMKFLKKVGIKKTVETLKTSAPSASFARDTGGCSTSMDILIPAGFHGGPRTRNGGP 529
             VGGWGMKFLKK+ + +T +  K S  S           TS+D++IP G HGGPR RNGGP
Sbjct:   449 VGGWGMKFLKKIPLARTKDASKCSKHS-----------TSIDVVIPLGIHGGPRNRNGGP 497

Query:   530 SGIIERWRSXXXXXXXXXXXXXPLTVLGTRLSKKEAIYQADMHD 573
             S +I+RW+S             PLTVL  +  K ++  Q ++ +
Sbjct:   498 SSLIQRWKSGGCCDCSGWDLGCPLTVLKGQARKDQSEGQCNLFE 541

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2018299 AT1G04490 "AT1G04490" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
 Identities = 51/131 (38%), Positives = 72/131 (54%)

Query:   502 DTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTRLS 561
             +T   S SM+++IP+G HGGP     GPS +IERW+S              LT+L  +  
Sbjct:   282 ETSTSSISMNVVIPSGIHGGPED---GPSSLIERWKSQGNCDCGGWDLCCSLTLLKGQPR 338

Query:   562 KKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVA 621
             K +  Y          F+LF+ GSK     L++VNV   LY + F + L++LQSF+IA+A
Sbjct:   339 KDQ--Y----------FELFIEGSKHETTGLKIVNVSGGLYLVQFEAKLTSLQSFAIALA 386

Query:   622 SIHSQSPTLRP 632
              IHS+   LRP
Sbjct:   387 FIHSEK--LRP 395

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2123106 AT4G11450 [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 9.1e-15, P = 9.1e-15
 Identities = 102/371 (27%), Positives = 166/371 (44%)

Query:   285 GNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICD--NESLLVG 342
             G P F F  D  +EV+ A    S++G++    +  +   ++       + D   ESLLV 
Sbjct:   287 GLPVFQFVSDSPEEVYAAKTWKSDNGSTWVYTFSSAGSRKRSSASVRGLTDVSKESLLVA 346

Query:   343 KMKVSISFNLCPDNSKIMETQFTLFGSNEDFGGGMQTSRQAARK-NKGLSKKVVDAFRTT 401
             +M+V+    +C +  K  +   TL  +        Q  R  + K ++ L    V+   + 
Sbjct:   347 QMQVTCK--MCSEVRKKGQDPETLMVNEFVLYDIAQARRSVSTKEDQSLPLDTVNN-ASK 403

Query:   402 HSFKR----RTLSKFGGSSAILENSSWEPCQNLGGND--DSLGAACXXXXXXXXXXXXAA 455
             +S K     R  S  G +S  ++  S +P +     D   S G               AA
Sbjct:   404 NSVKSDSEIRNNSMSGDASDTMKQRS-QPKRTSQSYDLEASNGTNPWSAANLHPDLEIAA 462

Query:   456 IIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTS----APSASFARDTGGCST--S 509
             II+++ + E R+       +K+ +  G K+ +E  KT+    +P     ++  G  +   
Sbjct:   463 IIIQDTI-EKRES------LKYRR--GDKRLME--KTNILGLSPIEEEKKELFGSRSLEK 511

Query:   510 MDILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGT-RLSKKEAIYQ 568
             + ++IP G HG P T N  PS +I+RWRS             PL VLG  R+S     + 
Sbjct:   512 LKVVIPRGNHGLPTTENSCPSPLIQRWRSGGGCDCGGWDMACPLMVLGNPRIS---CSHD 568

Query:   569 ADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQ-- 626
               + +  +   LFV G+K+  P L M  V +  Y +HFH+ LS LQ+FSI VA +H+   
Sbjct:   569 QPLVENQHPLQLFVQGAKEHIPALYMSFVEEGQYDVHFHAQLSTLQAFSICVAILHNTEV 628

Query:   627 SPTLRP-KNVQ 636
             S + R  +NVQ
Sbjct:   629 SDSYRNGENVQ 639

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2031393 AT1G63520 "AT1G63520" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 41/129 (31%), Positives = 62/129 (48%)

Query:   507 STSMDILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTRLSKKEAI 566
             S  M +++P G HG P T N  P+ I++RWRS              L VL       E I
Sbjct:   371 SREMKVIVPTGNHGLPDTENSCPTPILQRWRSGGGCDCSGWDMGCHLFVL----ESPELI 426

Query:   567 YQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQ 626
                + H   +  +LF+   K+  P + M  +R+  Y + FH+ LSALQ+FSI VA +   
Sbjct:   427 ---NNH---HGLELFIESGKEITPAMTMTCIREGHYEVKFHAKLSALQAFSICVAELQRT 480

Query:   627 SPTLRPKNV 635
               +   +N+
Sbjct:   481 EVSRGERNI 489

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010014 "meristem initiation" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2154553 AT5G59020 "AT5G59020" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
 Identities = 35/121 (28%), Positives = 63/121 (52%)

Query:   509 SMDILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTR--LSKKEAI 566
             S  +++ +G H  P+   GGPS +I+RWR+              L +L  +  LS K++ 
Sbjct:   614 SATVILQSGVHSMPQ--KGGPSSLIQRWRTGGSCDCGGWDMGCNLRILTNQHNLSYKKSA 671

Query:   567 YQADMHDECNSFDLFVNGSK-QGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHS 625
               ++     N F+LF  G + +  P L    +++ +Y + ++S+LS LQ+FSI +A   S
Sbjct:   672 -TSNSPPSSNRFELFFLGEQAEEHPFLSFKPIKEGIYSVAYNSSLSQLQAFSICMALAES 730

Query:   626 Q 626
             +
Sbjct:   731 R 731

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065644 AT2G37930 "AT2G37930" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
 Identities = 32/116 (27%), Positives = 56/116 (48%)

Query:   512 ILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTRLSKKEAIYQADM 571
             I++P+G H  P+  N  P  +I RW++              L VL    +K + +     
Sbjct:   325 IILPSGVHTLPKDGNNSPLPLINRWKTGGECDCGGWDIGCKLRVLSYNHTKTQTL----- 379

Query:   572 HDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQS 627
                 +SF LF    ++  P  +MV+  D+L+ + F S++S L++F I++A    QS
Sbjct:   380 ----SSFQLF--DQERDEPAFKMVSHGDELHSVEFGSSISLLEAFFISLAVTSHQS 429

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2150029 AT5G01030 "AT5G01030" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
 Identities = 35/119 (29%), Positives = 53/119 (44%)

Query:   505 GCSTSMD---ILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTRLS 561
             G  TS +   ++IP G H  P    G PS +I RWRS              L VL    S
Sbjct:   606 GSYTSFEETSVIIPGGVHSFPE--KGAPSPLISRWRSGGLCDCGGWDVGCKLHVL----S 659

Query:   562 KKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAV 620
              K  +++   +     FD  V+  +  +P L M  ++  +Y + F S +S LQ+F + V
Sbjct:   660 NKTVLHK--FNQSFTLFDQEVS-EQDSSPALAMTELKTGIYRVEFGSFVSPLQAFFVCV 715

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2042972 AT2G29510 "AT2G29510" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
 Identities = 34/123 (27%), Positives = 60/123 (48%)

Query:   512 ILIPAGFHGGPRTRNGGPSGIIERWRSXXXXXXXXXXXXXPLTVLGTRLSKKEAIYQADM 571
             +++P+G H  P    GGPS +I+RW+S              L +L  + +K   I  +  
Sbjct:   668 VVLPSGVHSLPH--KGGPSSLIQRWKSDGSCDCGGWDTGCNLRILTNQHNKP--INPSPT 723

Query:   572 HDECNSFDLFVNGSKQ---GAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQSP 628
               +  +F LF  G  Q     P L     R+ +Y + ++++LS LQ+FSI +A    ++P
Sbjct:   724 TSD--AFKLFFQGGVQENNNQPYLSFTTYREGVYAVEYNTSLSLLQAFSICIAVNEGRNP 781

Query:   629 TLR 631
              ++
Sbjct:   782 LIK 784

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020338001 SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (633 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	637
pfam12043	277	pfam12043, DUF3527, Domain of unknown function (DU	3e-61
pfam12043	277	pfam12043, DUF3527, Domain of unknown function (DU	3e-21

>gnl|CDD|221392 pfam12043, DUF3527, Domain of unknown function (DUF3527)

 Score =  205 bits (522), Expect = 3e-61
 Identities = 79/186 (42%), Positives = 106/186 (56%), Gaps = 13/186 (6%)

Query: 442 LLENHLPPNLELAAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTSAPSASFAR 501
           L ++ L PNLE+AAI++++   E R+      G                     S    R
Sbjct: 105 LFDSDLHPNLEIAAIVIQDPF-ERRESLTEVGGWGSKFL--------KKTPLDQSKELGR 155

Query: 502 DTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLS 561
            T   STS+  +IP+G HG PR  N GPS +I+RWRSGG CDCGGWD+GCPLTVL  +  
Sbjct: 156 YTSSESTSV--VIPSGVHGLPRKGNSGPSPLIQRWRSGGGCDCGGWDMGCPLTVLKNQAR 213

Query: 562 KKEAIYQADMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVA 621
           K +    +   +    F+LFV G K+  P L M NVR+ LY + FH++LSALQ+FSI VA
Sbjct: 214 KNK--GDSPTQESSQPFELFVQGGKEEDPALSMTNVREGLYSVEFHASLSALQAFSICVA 271

Query: 622 SIHSQS 627
            +HS+ 
Sbjct: 272 LLHSRE 277

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 120 amino acids in length. This domain has a conserved CDCGGWD sequence motif. Length = 277

>gnl|CDD|221392 pfam12043, DUF3527, Domain of unknown function (DUF3527)

 Score = 94.1 bits (234), Expect = 3e-21
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)

Query: 270 STSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQK 329
           S +    VLQ  W  G P FVFS+DD ++++VA    S S +   ++++Y+FH     +K
Sbjct: 1   SPTHLQAVLQLTWKNGIPLFVFSVDDPEDIYVATTWKSGSSDKNDLNWVYTFHSVGERKK 60

Query: 330 EHEICDNES-------LLVGKMKVSISFNLCPDNSKI-METQFTLFGSN 370
           +     N         L+VG+M+VS S +    + K+ +  +F LF S+
Sbjct: 61  KSASWLNSKDKNKCSGLIVGQMQVSSSLSSEVQDEKVSLIREFVLFDSD 109

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 120 amino acids in length. This domain has a conserved CDCGGWD sequence motif. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	637
PF12043	346	DUF3527: Domain of unknown function (DUF3527); Int	100.0
PF01167	246	Tub: Tub family; InterPro: IPR000007 Tubby, an aut	99.69
KOG2502	355	consensus Tub family proteins [General function pr	99.64
KOG2503	565	consensus Tubby superfamily protein TULP4 [General	97.03

>PF12043 DUF3527: Domain of unknown function (DUF3527); InterPro: IPR021916 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=1.1e-108  Score=848.50  Aligned_cols=333  Identities=44%  Similarity=0.775  Sum_probs=289.0

Q ss_pred             CcccceeEEEEEecCCcceEEEEeCCcceEEEEeecccCCCCCCCcceEEEEEeccCCccc---cccC---C-CCccceE
Q 006651          270 STSTSLGVLQCMWDGGNPHFVFSIDDRKEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKE---HEIC---D-NESLLVG  342 (637)
Q Consensus       270 ssS~~qglLQl~~KnG~P~FeFsld~p~eV~vA~~~k~~~~dd~~ln~vYtFHs~k~g~K~---~~~~---d-~~s~lVG  342 (637)
                      ||+++||+|||+||||+|||+|+||||++||||++||+++.++++++||||||+.++++|.   |..+   + ..++|||
T Consensus         1 S~s~~qalLq~t~KNG~P~F~Fsvd~~~~VlaAt~~k~~~~~~~~~~~vYTFhs~~e~KKks~~w~~~~~k~k~~~~iVG   80 (346)
T PF12043_consen    1 SPSHLQALLQCTWKNGLPLFEFSVDNPEEVLAATMWKSGSSDKNDLNWVYTFHSIKEVKKKSGSWINSGDKNKSSSNIVG   80 (346)
T ss_pred             CCcceeEEEEEEEeCCeEEEEEEeCCcccEEEEEEeecccccccccceEEEEEeeccccccccccccccccccCCcceEE
Confidence            5799999999999999999999999999999999999999999999999999996654442   2222   1 2448999


Q ss_pred             EEEeeeeecccCCCCce-eeeeEEEeecCCCCCCCcccchhhhhcccCcchhhhhccccccccccccccccCCCcccccC
Q 006651          343 KMKVSISFNLCPDNSKI-METQFTLFGSNEDFGGGMQTSRQAARKNKGLSKKVVDAFRTTHSFKRRTLSKFGGSSAILEN  421 (637)
Q Consensus       343 QMkVSss~sLcs~Ns~~-m~tEFVLyg~~~~~~~~~qt~s~~~rk~kgLsk~V~e~~~~~~ss~~r~~sk~~~sss~~e~  421 (637)
                      |||||+++++|+++..+ |+|||||||+++.+.. .+     ..+.+|++++|++++++++..  |++|||++++++++.
T Consensus        81 QMkVSss~~~~~~~~~~s~~~EFVLf~~~~~~~~-~s-----~~~~~~~~~~~~~~~~~s~~~--~~~s~~~~~~~~~~~  152 (346)
T PF12043_consen   81 QMKVSSSLSSEPSKQGSSMVTEFVLFGVDHARRS-QS-----SEEKKGLSKRVSEPMKASNVS--RSISRFSGSSAILED  152 (346)
T ss_pred             EEEeeeeeeecccCCcceeEEEEEEEeccccccc-cc-----cccccccccccccccccCccc--ccccccCCcchhhhh
Confidence            99999999999887776 9999999998876522 22     122379999999999997755  899999999999999


Q ss_pred             CCCccccCCCCCCCccccccccccCCCCCceeeeeeeeccCCccchh-----hccCccccccccccccccccccccCCCC
Q 006651          422 SSWEPCQNLGGNDDSLGAACLLENHLPPNLELAAIIVKEHLPENRQE-----EVGGWGMKFLKKVGIKKTVETLKTSAPS  496 (637)
Q Consensus       422 ~~~e~~q~~~~n~d~~~~~~l~~~dL~PNlElAAIVVk~~~P~~k~e-----~~Ggwglkfl~ks~~~~~~~~~k~sl~~  496 (637)
                      ++|+++++.   .|.++++||+++|||||+||||||||+  |++|++     +.||||+||+++.+..+..+.       
T Consensus       153 ~~~~~~~~~---~~~~~~~~~~~~dl~~n~ElAAiVvk~--p~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-------  220 (346)
T PF12043_consen  153 KSQEPFQNN---SDNSESVPLLENDLPPNLELAAIVVKI--PFEKRESLKYDRGGGWGLKFLSKSPDNQRCET-------  220 (346)
T ss_pred             hcccccccc---ccccccCccccccCCCCceEEEEEEec--cccccccccccccCcccchhhhcccccccccc-------
Confidence            999888664   455778899999999999999999996  555443     789999999999888885421       


Q ss_pred             CccccCCCCCccceEEEecCCCCCCCCCCCCCCcccccccccCCccCCCCCCCCcceEEecCCCCcccchhhhcccccCC
Q 006651          497 ASFARDTGGCSTSMDILIPAGFHGGPRTRNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSKKEAIYQADMHDECN  576 (637)
Q Consensus       497 ~~~~~~tg~~~~s~tVViP~G~HGlP~~~~G~PSpLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~~e~~~~a~t~~~~~  576 (637)
                         ......++.++|||||+|+||+|++++++|||||+||||||+||||||||||||+||.|+++.++....  +.+.++
T Consensus       221 ---~~~~~~~~~s~tVvlP~G~Hg~P~~g~~~PS~LI~RWrSGG~CDCGGWDmgC~L~VL~n~~~~~~~~~~--~~~~~~  295 (346)
T PF12043_consen  221 ---SLNSNSSSCSTTVVLPSGVHGLPNTGNGGPSSLIDRWRSGGSCDCGGWDMGCPLRVLSNQSQNSKKSSS--SKESSH  295 (346)
T ss_pred             ---cccCCCCCccEEEEecCCccCCCCCCCCCChHHHHHhhhCCCcCCCCcccCCCeEEeCCCCcccccccc--ccccCC
Confidence               123456778999999999999999999999999999999999999999999999999999988764433  345789


Q ss_pred             ceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhccCC
Q 006651          577 SFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQS  627 (637)
Q Consensus       577 ~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh~q~  627 (637)
                      +||||+||++++.|+|+|++|+||+|+|||+++||+|||||||||+||||+
T Consensus       296 ~feLf~QG~~~~~P~~sm~~v~~G~Y~V~F~s~lS~LQAFSiciA~lh~~~  346 (346)
T PF12043_consen  296 PFELFVQGSKEEDPAFSMVNVKEGLYSVEFHSSLSPLQAFSICIAVLHSQK  346 (346)
T ss_pred             ceeeeecccccCCCceEEEEccCCeEEEEecCcchHHHHHHHhheeeeccC
Confidence            999999999998899999999999999999999999999999999999985

This domain is found in eukaryotes. This domain is about 120 amino acids in length. This domain has a conserved CDCGGWD sequence motif.

>PF01167 Tub: Tub family; InterPro: IPR000007 Tubby, an autosomal recessive mutation, mapping to mouse chromosome 7, was recently found to be the result of a splicing defect in a novel gene with unknown function

Probab=99.69  E-value=5.9e-16  Score=154.85  Aligned_cols=108  Identities=24%  Similarity=0.355  Sum_probs=75.2

Q ss_pred             CccceEEEecCCCCCCCCC--------CCCCCcccccccccCCccCCCCCCCCcceEEecCCCCc-ccchhhh-------
Q 006651          506 CSTSMDILIPAGFHGGPRT--------RNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSK-KEAIYQA-------  569 (637)
Q Consensus       506 ~~~s~tVViP~G~HGlP~~--------~~G~PSpLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~-~e~~~~a-------  569 (637)
                      -||+|+|+||.=.-.....        .+.....++.||..+         ..-.+++|.|+.|. ++ ..++       
T Consensus       122 GPRkM~v~ip~i~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---------~~~~~~~l~~k~P~w~~-~~~~~~l~F~g  191 (246)
T PF01167_consen  122 GPRKMTVVIPSIPSSGQESGGRVPFQPLNQEKDSLLSRFQNK---------KKDELIVLKNKPPRWNE-ELQSYVLNFNG  191 (246)
T ss_dssp             SSEEEEEEEE-B-TTS-----B-----SS-CCCSHHHHHHCT----------TTSEEEEEE---EEET-TTTEEEEEETT
T ss_pred             CCcEEEEEecCCCccccccceeeeeecccccccccccccccc---------CCcceEEEecCCCcEec-cCCeEEeccCC
Confidence            4799999999833322200        011233467777664         22478999999887 43 2222       


Q ss_pred             -cccccCCceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhc
Q 006651          570 -DMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIH  624 (637)
Q Consensus       570 -~t~~~~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh  624 (637)
                       +++++.|+|+|+. ..+++..+|+|+.++++.|+|||++||||||||+||||.|+
T Consensus       192 Rv~~~SvKNFql~~-~~~~~~~~lqfGk~~~~~f~~d~~~Pls~~qAF~i~lssfd  246 (246)
T PF01167_consen  192 RVTVASVKNFQLVH-PSDPDRIVLQFGKVGKDVFTMDFRYPLSPLQAFAIALSSFD  246 (246)
T ss_dssp             SECC-BTTEEEEEB-TTBTTSESEEEEEEETTEEEEEEETT-BHHHHHHHHHHHHH
T ss_pred             eEeccccceeEEEc-cCCCCeEEEEEEEecCCEEEEEecCCCCHHHHHHHHHhcCC
Confidence             6889999999988 46678899999999999999999999999999999999885

This mutation maps to the tub gene [, ]. The mouse tubby mutation is the cause of maturity-onset obesity, insulin resistance and sensory deficits. By contrast with the rapid juvenile-onset weight gain seen in diabetes (db) and obese (ob) mice, obesity in tubby mice develops gradually, and strongly resembles the late-onset obesity observed in the human population. Excessive deposition of adipose tissue culminates in a two-fold increase of body weight. Tubby mice also suffer retinal degeneration and neurosensory hearing loss. The tripartite character of the tubby phenotype is highly similar to human obesity syndromes, such as Alstrom and Bardet-Biedl. Although these phenotypes indicate a vital role for tubby proteins, no biochemical function has yet been ascribed to any family member [], although it has been suggested that the phenotypic features of tubby mice may be the result of cellular apoptosis triggered by expression of the mutated tub gene. TUB is the founding-member of the tubby-like proteins, the TULPs. TULPs are found in multicellular organisms from both the plant and animal kingdoms. Ablation of members of this protein family cause disease phenotypes that are indicative of their importance in nervous-system function and development []. Mammalian TUB is a hydrophilic protein of ~500 residues. The N-terminal (IPR005398 from INTERPRO) portion of the protein is conserved neither in length nor sequence, but, in TUB, contains the nuclear localisation signal and may have transcriptional-activation activity. The C-terminal 250 residues are highly conserved. The C-terminal extremity contains a cysteine residue that might play an important role in the normal functioning of these proteins. The crystal structure of the C-terminal core domain from mouse tubby has been determined to 1.9A resolution. This domain is arranged as a 12-stranded, all anti-parallel, closed beta-barrel that surrounds a central alpha helix, (which is at the extreme carboxyl terminus of the protein) that forms most of the hydrophobic core. Structural analyses suggest that TULPs constitute a unique family of bipartite transcription factors [].; PDB: 3C5N_B 2FIM_A 1I7E_A 1C8Z_A 1S31_A.

>KOG2502 consensus Tub family proteins [General function prediction only]

Probab=99.64  E-value=4.7e-15  Score=154.77  Aligned_cols=108  Identities=22%  Similarity=0.356  Sum_probs=86.4

Q ss_pred             ccceEEEecCCCCCCCCCC------CCCCcccccccccCCccCCCCCCCCcceEEecCCCCc-ccchhhh--------cc
Q 006651          507 STSMDILIPAGFHGGPRTR------NGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSK-KEAIYQA--------DM  571 (637)
Q Consensus       507 ~~s~tVViP~G~HGlP~~~------~G~PSpLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~-~e~~~~a--------~t  571 (637)
                      ||+|+||+|+=--..|...      +-.| .++.||....         -=+|+||.|+.|. ++ +.+.        +|
T Consensus       229 PRrM~~im~~i~~s~~~~~v~~q~~~~~~-~~l~r~~~k~---------~e~~lvL~NK~P~wne-~~q~~~LNF~GRVT  297 (355)
T KOG2502|consen  229 PRRMTVIMPGISPSAPGGRVPVQPENDHP-SLLFRSQNKD---------KEGLLVLKNKTPRWNE-ETQSYCLNFHGRVT  297 (355)
T ss_pred             CceeEEeccCCCCCCCCCccccccccccc-chhhhccccC---------cccceEeecCCCcccc-ccceEEEecCCeEE
Confidence            8999999997332222111      1112 3899999874         3679999999998 55 3322        79


Q ss_pred             cccCCceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhccC
Q 006651          572 HDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQ  626 (637)
Q Consensus       572 ~~~~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh~q  626 (637)
                      ++++|+|||+. ....+..+|+|++|+++.|++||+-|||++|||+||++.|++.
T Consensus       298 ~ASVKNFQLv~-~~~p~~iiLQFGrV~kD~FTmDYrYPlSa~QAFaIcLSSFdtK  351 (355)
T KOG2502|consen  298 QASVKNFQLVH-ALDPEYIILQFGRVGKDVFTMDYRYPLSAFQAFAICLSSFDTK  351 (355)
T ss_pred             EeeecceEEec-cCCCCEEEEEeeeeccceeeecccCccHHHHHHHHHHHhcccc
Confidence            99999999999 4466889999999999999999999999999999999999986

>KOG2503 consensus Tubby superfamily protein TULP4 [General function prediction only]

Probab=97.03  E-value=0.00049  Score=76.16  Aligned_cols=80  Identities=20%  Similarity=0.338  Sum_probs=61.5

Q ss_pred             cCCcc--CCCCCCCCcceEEecCCCCc-ccchhhh--------cccccCCceeEEeccccCCCCeEEEEeecCceEEEEE
Q 006651          538 SGGCC--DCGGWDLGCPLTVLGTRLSK-KEAIYQA--------DMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHF  606 (637)
Q Consensus       538 SGG~C--DCGGWD~GC~L~VL~N~~~~-~e~~~~a--------~t~~~~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF  606 (637)
                      ++..|  -|-.-|  |.+-|+.|+++- || ..+.        +|+++-++||+=..|    .-+++|++++.+.|++||
T Consensus       471 s~a~c~~as~~~d--~R~~vmtnK~p~wne-~tqVyqlDfgGrVtqesakNfQIel~g----kQvmqFgRidg~aytldf  543 (565)
T KOG2503|consen  471 SQAMCSYASSVVD--ARCEVMTNKPPAWNE-HTQVYQLDFGGRVTQESAKNFQIELFG----KQVMQFGRIDGPAYTLDF  543 (565)
T ss_pred             ccchhcccccccc--ceEEEeecCCccccc-cceEEEeccCCccchhhhccceEeecc----hhhheeccccCCcccCCC
Confidence            34456  444333  667999999877 66 3332        688899999865532    357899999999999999


Q ss_pred             cCCCchhHHHHHHHhhhc
Q 006651          607 HSTLSALQSFSIAVASIH  624 (637)
Q Consensus       607 ~s~LS~LQAFSIcIA~lh  624 (637)
                      +.+.|++|||++++|-+.
T Consensus       544 qypfSa~QaFavalanvt  561 (565)
T KOG2503|consen  544 QYPFSAGQAFAVALANVT  561 (565)
T ss_pred             CCchHHHHHHHHHHhhhh
Confidence            999999999999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	637
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 1e-04
 Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 43/220 (19%)

Query: 297 KEVFVANLSNSESGNSKSMDYMYSFHWRKGGQKEHEICDNESLLVGKMKVSISFNLCPDN 356
           K     ++  S     K MD+     W          C++   ++ +M   + + + P+ 
Sbjct: 163 KTWVALDVCLSYKVQCK-MDF--KIFWLNLKN-----CNSPETVL-EMLQKLLYQIDPNW 213

Query: 357 SKIMETQFTLFGSNEDFGGGMQTSRQAARKNKGL-------SKKVVDAF----R---TTH 402
           +   +    +          ++   ++      L       + K  +AF    +   TT 
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT- 272

Query: 403 SFKRRTLSKFGGSSAILENSSWEPCQNLGGNDDSLG--AACL--LENHLPP-----NLEL 453
             + + ++ F  ++     S       L   D+        L      LP      N   
Sbjct: 273 --RFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329

Query: 454 AAIIVKEHLPENRQEEVGGWGMKFLKKVGIKKTVETLKTS 493
            +II      E+ ++ +  W     K V   K    +++S
Sbjct: 330 LSII-----AESIRDGLATW--DNWKHVNCDKLTTIIESS 362

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	637
3c5n_A	246	Tubby-related protein 1; inositol, signalling, alt	99.78
2fim_A	276	Tubby related protein 1; tubby filled-barrel, beta	99.77

>3c5n_A Tubby-related protein 1; inositol, signalling, alternative splicing, disease mutation, polymorphism, retinitis pigmentosa, sensory transduction; HET: I3P; 1.80A {Homo sapiens} PDB: 1i7e_A* 1c8z_A

Probab=99.78  E-value=4.6e-18  Score=168.86  Aligned_cols=102  Identities=20%  Similarity=0.375  Sum_probs=80.8

Q ss_pred             CccceEEEecCCCCCCCCCCCCCCc---------ccccccccCCccCCCCCCCCcceEEecCCCCc-ccchhhh------
Q 006651          506 CSTSMDILIPAGFHGGPRTRNGGPS---------GIIERWRSGGCCDCGGWDLGCPLTVLGTRLSK-KEAIYQA------  569 (637)
Q Consensus       506 ~~~s~tVViP~G~HGlP~~~~G~PS---------pLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~-~e~~~~a------  569 (637)
                      -||.|+|+||+.      +.+|++.         +|+.||...      .+|   .+++|.|+.|. ++ ..++      
T Consensus       127 gPR~m~v~iP~~------~~~~~~~~~~p~~~~~~~~~~~~~~------~~~---~~~~l~nK~P~w~e-~~~~y~LnF~  190 (246)
T 3c5n_A          127 GPRRMTVIIPGM------SAENERVPIRPRNASDGLLVRWQNK------TLE---SLIELHNKPPVWND-DSGSYTLNFQ  190 (246)
T ss_dssp             -CCCEEEEEECB------CTTSCBCCCCCSSTTSSHHHHHHHT------CCT---TEEEEEECCCEEET-TTTEEECCCT
T ss_pred             CCeEEEEEecCc------ccCCCEeeccCCCccccchhhhhcc------CCc---ceEEEeccCCcccc-cCCEEEEecC
Confidence            579999999973      2344443         456677653      122   48899999988 54 3222      


Q ss_pred             --cccccCCceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhc
Q 006651          570 --DMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIH  624 (637)
Q Consensus       570 --~t~~~~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh  624 (637)
                        +|++++|+|+|+. ..+++..+|+|++++++.|+|||+.||||||||+||||.|+
T Consensus       191 GRvt~aSvKNFqLv~-~~~~~~ivlqFGKv~~d~FtmD~~yPlS~~QAFaI~LsSfD  246 (246)
T 3c5n_A          191 GRVTQASVKNFQIVH-ADDPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFD  246 (246)
T ss_dssp             TSCCBCCTTCEEEEB-TTBTTSCSEEEEEEETTEEEEEEETTCCHHHHHHHHHHTCC
T ss_pred             CeeeccccceEEEEe-cCCCCEEEEEEEEecCCeEEEEecCCCCHHHHHHHHHHcCC
Confidence              7899999999998 45677899999999999999999999999999999999875

>2fim_A Tubby related protein 1; tubby filled-barrel, beta-barrel, filled-beta-roll, 12-stran barrel, helix-filled-barrel, retinitis pigmentosa; HET: 3DP; 1.90A {Homo sapiens} PDB: 1s31_A*

Probab=99.77  E-value=6.5e-18  Score=170.34  Aligned_cols=104  Identities=19%  Similarity=0.374  Sum_probs=80.9

Q ss_pred             CccceEEEecCCCCCCCCCCCCCCc---------ccccccccCCccCCCCCCCCcceEEecCCCCc-ccchhhh------
Q 006651          506 CSTSMDILIPAGFHGGPRTRNGGPS---------GIIERWRSGGCCDCGGWDLGCPLTVLGTRLSK-KEAIYQA------  569 (637)
Q Consensus       506 ~~~s~tVViP~G~HGlP~~~~G~PS---------pLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~-~e~~~~a------  569 (637)
                      -||.|+|+||+.      +.+|++.         +|+.||.+.      .+|   .+++|.|+.|. ++ ..++      
T Consensus       151 gPR~m~v~iP~~------~~~~~~~~~~p~~~~~~ll~~~~~~------~~~---~~~~l~nK~P~wne-~~~~y~LnF~  214 (276)
T 2fim_A          151 GPRRMTVIIPGM------SAENERVPIRPRNASDGLLVRWQNK------TLE---SLIELHNKPPVWND-DSGSYTLNFQ  214 (276)
T ss_dssp             --CCEEEEEECB------CTTSCBCCCCCSSTTCSHHHHHHHT------CCT---TEEEEEECCCEEET-TTTEEECCCT
T ss_pred             CCeEEEEEecCc------ccCCCEecccCCCcccccchhhhcc------CCc---ceEeeeccCCcccc-cCCEEEEecC
Confidence            579999999973      2344443         466777764      222   48999999988 44 3222      


Q ss_pred             --cccccCCceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhccC
Q 006651          570 --DMHDECNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQ  626 (637)
Q Consensus       570 --~t~~~~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh~q  626 (637)
                        +|++++|+|||+. ..+++..+|+|++++++.|+|||+.||||||||+||||.|++.
T Consensus       215 GRVt~aSvKNFQLv~-~~d~~~ivlQFGKv~~d~FtmD~~yPlS~~QAFaI~LsSfd~K  272 (276)
T 2fim_A          215 GRVTQASVKNFQIVH-ADDPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGK  272 (276)
T ss_dssp             TCCCSCCTTCEEEEC-TTCTTSCSEEEEEEETTEEEEEECTTCCHHHHHHHHHHTCC--
T ss_pred             CeeeccccceEEEEe-cCCCCEEEEEEeecCCCeEEEEecCCCCHHHHHHHHHHhcccc
Confidence              7899999999998 4567789999999999999999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	637
d1c8za_	265	Transcriptional factor tubby, C-terminal domain {M	99.61

>d1c8za_ d.23.1.1 (A:) Transcriptional factor tubby, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Tubby C-terminal domain-like
superfamily: Tubby C-terminal domain-like
family: Transcriptional factor tubby, C-terminal domain
domain: Transcriptional factor tubby, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=1.1e-14  Score=143.93  Aligned_cols=112  Identities=15%  Similarity=0.299  Sum_probs=83.6

Q ss_pred             CccceEEEecCCC-CCCCCC--CCCCCcccccccccCCccCCCCCCCCcceEEecCCCCc-ccc-hh------hhccccc
Q 006651          506 CSTSMDILIPAGF-HGGPRT--RNGGPSGIIERWRSGGCCDCGGWDLGCPLTVLGTRLSK-KEA-IY------QADMHDE  574 (637)
Q Consensus       506 ~~~s~tVViP~G~-HGlP~~--~~G~PSpLI~RWrSGG~CDCGGWD~GC~L~VL~N~~~~-~e~-~~------~a~t~~~  574 (637)
                      -||.|+|+||+.- .+.|..  .......++.+|+++.      +|   .+++|.|+.|. ++. ..      .-++.++
T Consensus       140 GPR~m~~~ip~~~~~~~~~~~~p~~~~~~~~~~~~~~~------~~---~~~~l~~k~P~~n~~~~~~~LnF~gRv~~~S  210 (265)
T d1c8za_         140 GPRKMSVIVPGMNMVHERVCIRPRNEHETLLARWQNKN------TE---SIIELQNKTPVWNDDTQSYVLNFHGRVTQAS  210 (265)
T ss_dssp             SCCCEEEEEECBCTTSCBCCCCCSSTTSSHHHHHHTTC------CS---SEEEEEECCCEEETTTTEEEEEETTEEEECB
T ss_pred             CCceeEEEecCCCccccccccCCCCcchhhhHHhhccC------cc---cceEEecCCCeeeccCCEEEeccCCEEeccc
Confidence            4799999999732 222211  0122337888999863      22   47889999887 431 11      1267899


Q ss_pred             CCceeEEeccccCCCCeEEEEeecCceEEEEEcCCCchhHHHHHHHhhhccCC
Q 006651          575 CNSFDLFVNGSKQGAPMLRMVNVRDDLYFIHFHSTLSALQSFSIAVASIHSQS  627 (637)
Q Consensus       575 ~~~FeLf~qG~~q~~P~Lsm~~v~dGlYsVdF~s~LS~LQAFSIcIA~lh~q~  627 (637)
                      +|+|+|+.+ .+++..+|+|+.++++.|.|||+.|||+||||+||||.|++.-
T Consensus       211 vKNFql~~~-~~~~~~~lqfgKv~~~~f~~d~~~Pls~~qaF~i~lssf~~Kl  262 (265)
T d1c8za_         211 VKNFQIIHG-NDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKL  262 (265)
T ss_dssp             TTEEEEECT-TCTTSCSEEEEEEETTEEEEEECTTCCHHHHHHHHHHHHHSSC
T ss_pred             cceEEEEeC-CCCCEEEEEEEEccCCeEEEEecCCCCHHHHHHHHHHHhcccc
Confidence            999999874 4566789999999999999999999999999999999998753