Citrus Sinensis ID: 006718

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630----
Protein Sequence
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETESFECTKKAVSSPTKNRVVEEGILRMGL
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccEEcccccEEEEEEccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccHHHHHHHcccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cEEEccEEccccccHHHHHcHcccEEEEccccEEEEEccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHcHEEEEcccccccccccEEEEEccccccHHHEcHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHHHHHHcHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEcccccccccccEEEEcccccccccccccccEEccccccccccEHHHHHEEccc
Coil and Loop (DISEMBL)
mvvnnsvfcstpELVEEELATmeglnvektegieeikheefrENVSRVETFGESieekgresssssdfltsettgheeqshssseessspplgwpvqkaeaqdsssvdgnekIEKSRLDLekkgstlpdVEMMKERFAKLLLgedmsgcgngVSTALAISNAITNLCATLFGqlwrleplpleKKAMWRREMEWFLCVSDHIveltpswqtfpdgsklevmtcrprsdlyinlpalrKLDNMLLEILDsfentefwyvdqgilaseadgsTSFRRALQRQEekwwlpvprvplgglhentRKQLQHKRDCTNQILKAAMAINSItladmevpesyfeslpkngrvsLGDLIYRYissdqfspeYLLECLDLSSEHQATEIANRVEAAMYVWRKrtnskpansttrsssksswGLVKEFVVDTEKRELLADRAESLLLCLKQwfpglpqttldmskiqynKDVGKSILESYSRVLESLAFNIVAriddllyvddltkhsdsfspmskggmiahksisipysvpfsstpyksafatptlspalvspakgdispfrtsskipqrgmgVKKALTDYLSIEnkgkdysnsideADSTLNIIreaspsqtetesfectkkavssptknrvvEEGILRMGL
Flexible Loop (DISEMBL)
mvvnnsvfcstpelVEEELAtmeglnvektegieeikheefrenvsrvetfgesieekgresssssdfLTSETTgheeqshssseessspplGWPVQKAeaqdsssvdgnekieksrldlekkgstlpdvemMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELtpswqtfpdgsklevmtcrpRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQrqeekwwlpvprvplGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRkrtnskpansttrsssksswglvKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKgdispfrtsskipqrgmgVKKALTDYLSIenkgkdysnsiDEADSTLNIIREaspsqtetesfectkkavssptknrvveegilrmgl
Low Complexity Region (SEG)
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGREsssssDFLtsettgheeqshssseesssPPLGWPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANsttrssskssWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETESFECTKKAVSSPTKNRVVEEGILRMGL
Disordered region (IsUnstruct)
***************************************************************************************************************************************RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEAD****FRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWR*******************WGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTK*****************SISIPYSVPF***************************************************************************************************************
Disordered Region (DISOPRED)
*******FCSTPELVE**********************************************************************************************************************ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLE**AMWRREMEWFLCVSDHIVELTPSWQTF*DGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQ***********************WWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWR***************************VDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDL***************************************************************************TDYLSIE**************************************************EGILRMGL
Disordered Region (DISEMBL)
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVE***************************************************************IEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRT*****************GLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREA**********************NRVVEEGILRMGL
Disordered Region (DISPRO)
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEF**NVSR******************************************************************************TLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQG********************EKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTN*******************KEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKH************************************T*TL*P*********************RGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREAS**********CTKKAVSSPTKNRVVEEGILRMGL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETESFECTKKAVSSPTKNRVVEEGILRMGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	634	2.2.26 [Sep-21-2011]
Q93ZY2	548	Rop guanine nucleotide ex	no	no	0.664	0.768	0.589	1e-143
Q9LQ89	485	Rop guanine nucleotide ex	no	no	0.649	0.849	0.537	1e-122
Q9LV40	523	Rho guanine nucleotide ex	no	no	0.547	0.663	0.523	1e-111

>sp|Q93ZY2|ROGF1_ARATH Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2

 Score =  509 bits (1311), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/434 (58%), Positives = 319/434 (73%), Gaps = 13/434 (2%)

Query: 119 DLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLE 178
           D ++  + L ++EMMKERFAKLLLGEDMSG G GV TALAISNAITNL AT+FG+LWRLE
Sbjct: 80  DDKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLE 139

Query: 179 PLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRK 238
           PL  +KKAMWRRE+EW LCVSD IVEL PS Q FP G   E+M  RPRSDLY NLPAL+K
Sbjct: 140 PLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKK 199

Query: 239 LDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHE 298
           LD ML+++LD+F +TEFWY D+GI+  + D  +    A  RQE+KWWLP P+VP  GL E
Sbjct: 200 LDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSE 259

Query: 299 NTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSD 358
             RK+LQ  RD  NQILKAA+AINS  LA+ME+P+ Y E+LPK+G+  LG++IY+Y++++
Sbjct: 260 EARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTAN 319

Query: 359 QFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSW-GLVKE 417
           +FSPE LL+CLDLSSEHQ  EIANR+EAA++VWR++   +  +        SSW G VK 
Sbjct: 320 KFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRR--HKKQAKLKLSSWGGKVKG 377

Query: 418 FVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESL 477
            V D E+ + L  RAE+LL  L+  FPGLPQTTLDM+KIQYNKDVG+SILESYSRV+ES+
Sbjct: 378 LVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESM 437

Query: 478 AFNIVARIDDLLYVDDLTKHS----DSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFA 533
           AFNI ARIDD+LYVDD  + S    +S S  S  G+   K+ S+       S+P+ S FA
Sbjct: 438 AFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAFSV------QSSPHGSPFA 491

Query: 534 TPTLSPALVSPAKG 547
           TP LS A  SP + 
Sbjct: 492 TPALSVASRSPRRA 505

Acts as an activator of Rop GTPases by exchanging GDP with GTP. Stimulates Rop1 to control polarized pollen tube growth.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ89|ROGF2_ARATH Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana GN=ROPGEF2 PE=1 SV=2

 Score =  439 bits (1128), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/439 (53%), Positives = 309/439 (70%), Gaps = 27/439 (6%)

Query: 71  SETTG---HEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVD-------GNEKIEKSRLDL 120
           SET+G    ++   +SS  + + P  WPV   E+ +S+S +        + +IE     L
Sbjct: 50  SETSGGGFSDQIDETSSFCTEASPSDWPVL-TESNNSASSNFPTVFDLKHNQIETDE-HL 107

Query: 121 EKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPL 180
             +  + P++E MKERF+KLLLGEDMSG G GV TA+ ISNAITNL AT+FGQ  RLEPL
Sbjct: 108 AVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPL 167

Query: 181 PLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLD 240
            +E+K  W+REM   L V D+I E  P  Q   +G+ +EVM  RPR+D+YINLPALRKLD
Sbjct: 168 EIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLD 227

Query: 241 NMLLEILDSFENTEFWYVDQGILA--SEADGSTSFRRAL-QRQEEKWWLPVPRVPLGGLH 297
           +ML+E LDSF+ TEFWY ++G L+  S    + SFR+ + QR+EEKWWLP+P VPL GL 
Sbjct: 228 SMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLS 287

Query: 298 ENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYI-S 356
           E  RKQL+ KR+ TNQI KAAMAINS  L +M++P+SY  +LPK+G+ S GD IYR++ S
Sbjct: 288 EKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTS 347

Query: 357 SDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVK 416
           S +FSPE LL+ L + SEH+A ++A+RVEA+MY WR++           ++SKSSW +VK
Sbjct: 348 SGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRK--------ACLNNSKSSWNMVK 399

Query: 417 EFVVDTE---KRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRV 473
           + +  TE   K  +LA+RAESLL CLKQ +P L QT+LD+ KI  NKDVGK++LESYSRV
Sbjct: 400 DLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRV 459

Query: 474 LESLAFNIVARIDDLLYVD 492
           LE LAFNIVA IDD+LYVD
Sbjct: 460 LEGLAFNIVAWIDDVLYVD 478

Acts as an activator of Rop GTPases by exchanging GDP with GTP.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV40|ROGF8_ARATH Rho guanine nucleotide exchange factor 8 OS=Arabidopsis thaliana GN=ROPGEF8 PE=1 SV=1

 Score =  403 bits (1036), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/367 (52%), Positives = 267/367 (72%), Gaps = 20/367 (5%)

Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
           D+EMMK+RFAKLLLGEDMSG G GVS+ALA+SNAITNL A++FG+  +L+P+P +++A W
Sbjct: 85  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARW 144

Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
           ++E++W L V+DHIVE  PS QT  DG   E+M  R R DL +N+PALRKLD ML++ LD
Sbjct: 145 KKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLD 204

Query: 249 SFE-NTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
           +F  + EFWYV +       D     +    R  +KWWLP  +VP GGL E +R+ L  +
Sbjct: 205 NFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQ 257

Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
           +D   Q+ KAAMAIN+  L++ME+PESY +SLPKNGR SLGD IY+ I+ + F PE  L 
Sbjct: 258 KDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLA 317

Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKREL 427
            LD+S+EH+  ++ NR+EA++ +W+++ ++K         +KSSWG      V  EKREL
Sbjct: 318 MLDMSTEHKVLDLKNRIEASVVIWKRKLHTK--------DTKSSWG----SAVSLEKREL 365

Query: 428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
             +RAE++L+ LKQ FPGLPQ++LD+SKIQ+NKDVG+++LESYSR+LESLA+ +++RI+D
Sbjct: 366 FEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIED 425

Query: 488 LLYVDDL 494
           +LY D L
Sbjct: 426 VLYTDTL 432

Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop GTPases by exchanging GDP with GTP. Active as homodimer.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	634
255586972	673	Rop guanine nucleotide exchange factor,	0.888	0.836	0.772	0.0
359482068	701	PREDICTED: rop guanine nucleotide exchan	0.982	0.888	0.724	0.0
297740287	1231	unnamed protein product [Vitis vinifera]	0.946	0.487	0.729	0.0
449460361	598	PREDICTED: rop guanine nucleotide exchan	0.932	0.988	0.707	0.0
449485047	598	PREDICTED: rop guanine nucleotide exchan	0.932	0.988	0.709	0.0
356520923	640	PREDICTED: rop guanine nucleotide exchan	0.949	0.940	0.698	0.0
224140321	503	predicted protein [Populus trichocarpa]	0.774	0.976	0.788	0.0
224090819	448	predicted protein [Populus trichocarpa]	0.703	0.995	0.850	0.0
332688637	577	RopGEF7a [Medicago truncatula]	0.865	0.951	0.712	0.0
357505757	695	Rop guanine nucleotide exchange factor [	0.867	0.791	0.694	0.0

>gi|255586972|ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis] gi|223525876|gb|EEF28299.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/579 (77%), Positives = 491/579 (84%), Gaps = 16/579 (2%)

Query: 1   MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGR 60
           MV+NNSVF    E  E+E A MEG  +EK   + E   E   E+V  V+TFG  IE KGR
Sbjct: 81  MVINNSVF----EFPEKENAAMEGF-IEKNSDVIEGIDERSGESVDEVQTFGHLIEVKGR 135

Query: 61  ESSSSSDFLTSETTGHEEQSHSSSEESSSPPL---GWPVQK--AEAQDSSSVDG----NE 111
           ESSSSSDFLTSETTGHEEQSHSSSEE     L   GWP+ K   E  D +S +G     +
Sbjct: 136 ESSSSSDFLTSETTGHEEQSHSSSEEEELSSLPSLGWPLNKDEEEVHDCASTNGVCDDGK 195

Query: 112 KIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLF 171
           K+      LEK+ S++ ++EMMKERF+KLLLGEDMSGCGNGV TALAISNAITNLCATLF
Sbjct: 196 KLHLVDRKLEKQASSISEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLF 255

Query: 172 GQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYI 231
           GQLWRLEPLP EKKAMWRREMEWFLCVSDHIVEL PSWQTFPDGSKLEVMTCRPRSDLY+
Sbjct: 256 GQLWRLEPLPPEKKAMWRREMEWFLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYV 315

Query: 232 NLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRV 291
           NLPALRKLDNMLLEILDSF+NTEFWYVDQGILASEADGS+SFRRALQRQEEKWWLPVPRV
Sbjct: 316 NLPALRKLDNMLLEILDSFDNTEFWYVDQGILASEADGSSSFRRALQRQEEKWWLPVPRV 375

Query: 292 PLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLI 351
           P  GLHEN+RK+LQHKRDCTNQ+LKAAMAINSITLADMEVPE+Y E LPKNG+ SLGDLI
Sbjct: 376 PPCGLHENSRKELQHKRDCTNQMLKAAMAINSITLADMEVPETYLEGLPKNGKASLGDLI 435

Query: 352 YRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSS 411
           YRYISSDQF PE LL+CLDLSSEHQA E+ANRVEAA YVWRKRTNSKPAN+TTRS S+SS
Sbjct: 436 YRYISSDQFLPECLLDCLDLSSEHQAIELANRVEAATYVWRKRTNSKPANNTTRSGSRSS 495

Query: 412 WGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYS 471
           W LVKE + D +KR+LLADRAESLLLCLKQ FPGLPQTTLDMSKIQYNKDVGKSILESYS
Sbjct: 496 WELVKELMTDADKRDLLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYS 555

Query: 472 RVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSA 531
           RVLESLAFNIVARIDDLLYVDDLTKHSD FS +SK  +IAHKS++IPYSVP +STPYK+A
Sbjct: 556 RVLESLAFNIVARIDDLLYVDDLTKHSDQFSSISKVSVIAHKSVTIPYSVPVTSTPYKTA 615

Query: 532 FATPTLSPA-LVSPAKGDISPFRTSSKIP-QRGMGVKKA 568
           + TP+ SP  L+SP KGD SP  TS+K+  QRG+GVKK 
Sbjct: 616 YTTPSFSPGHLISPVKGDRSPISTSNKMSQQRGLGVKKC 654

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482068|ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis vinifera]

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/631 (72%), Positives = 517/631 (81%), Gaps = 8/631 (1%)

Query: 1   MVVNNSVFCSTPELVEEELATMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGR 60
           MVVNNSVFC +P  VE     MEG  +EK E +EE +   F ++   +ETFG  +EE+GR
Sbjct: 73  MVVNNSVFCDSPGFVEGA-TEMEGF-IEKGEKVEE-RENGFGDSGGGIETFGSLLEEEGR 129

Query: 61  ESSSSSDFLTSETTGHEEQSHSSSEESSSP-PLGWPVQKAEAQDSSSV---DGNEKIEKS 116
           E SSSSD LTSE T +EEQSHSSSEESSSP PL W VQK E+  S S    DG EK    
Sbjct: 130 ECSSSSDSLTSEATANEEQSHSSSEESSSPLPLDWSVQKQESSHSLSSGDPDGAEKPHSD 189

Query: 117 RLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWR 176
            + LEK+GST+ D+EMMKERF+KLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWR
Sbjct: 190 EMKLEKQGSTISDIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWR 249

Query: 177 LEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPAL 236
           LEPLP EKKAMWRREMEW LCVSDHIVEL PSWQTFPDGSKLEVMTCRPRSDLYINLPAL
Sbjct: 250 LEPLPAEKKAMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPAL 309

Query: 237 RKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGL 296
           RKLDNMLLE+LDSFE+TEFWYVDQGILA + DGS+SFRR LQRQEEKWWLPVPRVP GGL
Sbjct: 310 RKLDNMLLEVLDSFEDTEFWYVDQGILAPDTDGSSSFRRPLQRQEEKWWLPVPRVPPGGL 369

Query: 297 HENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYIS 356
           HEN+RKQLQHKRDCTNQILKAAMAINS  LA+ME+PESY E LPKNG+ SLGDLI+RY++
Sbjct: 370 HENSRKQLQHKRDCTNQILKAAMAINSTALAEMEIPESYLEVLPKNGKSSLGDLIHRYVT 429

Query: 357 SDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVK 416
           SDQFSPEYLL CLDLSSEHQA EIANRVEA++YVWR++TNSKP ++T+RS+S+SSW +VK
Sbjct: 430 SDQFSPEYLLACLDLSSEHQALEIANRVEASVYVWRRKTNSKPISNTSRSTSRSSWEIVK 489

Query: 417 EFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLES 476
           + +VD +KRELLA+RAESLL C+KQ FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLES
Sbjct: 490 DLMVDADKRELLAERAESLLHCMKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLES 549

Query: 477 LAFNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPT 536
           LA NIVARIDD+LYVDDLTKHSD    +SK G++AHK +SIPYSVP  +TPYK+AF TP+
Sbjct: 550 LASNIVARIDDVLYVDDLTKHSDQLLSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPS 609

Query: 537 LSPA-LVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNI 595
            SP  LVSPA GD SPF     +  RG GVKK LTDYLSI+ K +     I+  +S  N 
Sbjct: 610 FSPGQLVSPANGDRSPFINDCNLLHRGFGVKKVLTDYLSIDTKERGCGKPIEGLESISNT 669

Query: 596 IREASPSQTETESFECTKKAVSSPTKNRVVE 626
           +++AS  QT +E FE  K+ VSS     VVE
Sbjct: 670 VQDASAHQTGSEFFERRKEGVSSLRHGSVVE 700

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740287|emb|CBI30469.3| unnamed protein product [Vitis vinifera]

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/606 (72%), Positives = 501/606 (82%), Gaps = 6/606 (0%)

Query: 26   NVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQSHSSSE 85
            N +K E +EE +   F ++   +ETFG  +EE+GRE SSSSD LTSE T +EEQSHSSSE
Sbjct: 626  NDKKGEKVEE-RENGFGDSGGGIETFGSLLEEEGRECSSSSDSLTSEATANEEQSHSSSE 684

Query: 86   ESSSP-PLGWPVQKAEAQDSSSV---DGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLL 141
            ESSSP PL W VQK E+  S S    DG EK     + LEK+GST+ D+EMMKERF+KLL
Sbjct: 685  ESSSPLPLDWSVQKQESSHSLSSGDPDGAEKPHSDEMKLEKQGSTISDIEMMKERFSKLL 744

Query: 142  LGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDH 201
            LGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPLP EKKAMWRREMEW LCVSDH
Sbjct: 745  LGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPAEKKAMWRREMEWLLCVSDH 804

Query: 202  IVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQG 261
            IVEL PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLE+LDSFE+TEFWYVDQG
Sbjct: 805  IVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEVLDSFEDTEFWYVDQG 864

Query: 262  ILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAI 321
            ILA + DGS+SFRR LQRQEEKWWLPVPRVP GGLHEN+RKQLQHKRDCTNQILKAAMAI
Sbjct: 865  ILAPDTDGSSSFRRPLQRQEEKWWLPVPRVPPGGLHENSRKQLQHKRDCTNQILKAAMAI 924

Query: 322  NSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIA 381
            NS  LA+ME+PESY E LPKNG+ SLGDLI+RY++SDQFSPEYLL CLDLSSEHQA EIA
Sbjct: 925  NSTALAEMEIPESYLEVLPKNGKSSLGDLIHRYVTSDQFSPEYLLACLDLSSEHQALEIA 984

Query: 382  NRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLLCLKQ 441
            NRVEA++YVWR++TNSKP ++T+RS+S+SSW +VK+ +VD +KRELLA+RAESLL C+KQ
Sbjct: 985  NRVEASVYVWRRKTNSKPISNTSRSTSRSSWEIVKDLMVDADKRELLAERAESLLHCMKQ 1044

Query: 442  WFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSF 501
             FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA NIVARIDD+LYVDDLTKHSD  
Sbjct: 1045 RFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLASNIVARIDDVLYVDDLTKHSDQL 1104

Query: 502  SPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA-LVSPAKGDISPFRTSSKIPQ 560
              +SK G++AHK +SIPYSVP  +TPYK+AF TP+ SP  LVSPA GD SPF     +  
Sbjct: 1105 LSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPSFSPGQLVSPANGDRSPFINDCNLLH 1164

Query: 561  RGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETESFECTKKAVSSPT 620
            RG GVKK LTDYLSI+ K +     I+  +S  N +++AS  QT +E FE  K+ VSS  
Sbjct: 1165 RGFGVKKVLTDYLSIDTKERGCGKPIEGLESISNTVQDASAHQTGSEFFERRKEGVSSLR 1224

Query: 621  KNRVVE 626
               VVE
Sbjct: 1225 HGSVVE 1230

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460361|ref|XP_004147914.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis sativus]

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/613 (70%), Positives = 492/613 (80%), Gaps = 22/613 (3%)

Query: 22  MEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQSH 81
           ME   +EK++ I  I  E         ET G  IEE GRESSSSSDFLTSETTG EE SH
Sbjct: 1   MEESLIEKSQTIGHIVLEN--------ETLGHLIEEHGRESSSSSDFLTSETTGLEEHSH 52

Query: 82  SSSEESSSPPLGWP-VQKAEAQDSSSVDGNEKIEKSRLD---LEKKGSTLPDVEMMKERF 137
           S SE+SS P       +KAEA D    +G    +K+ +D   LEKK S+  ++EMMKERF
Sbjct: 53  SGSEDSSPPSSSSWSTRKAEAPDCIKANGVVNGDKNHVDNRKLEKKVSSSSEIEMMKERF 112

Query: 138 AKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLC 197
           +KLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPLP EKK MWRREM+W LC
Sbjct: 113 SKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPSEKKLMWRREMDWLLC 172

Query: 198 VSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWY 257
           VSDHIVELTP+WQTFPDGSKLEVMTCRPRSDLY+NLPALRKLDNMLLEILDSFE+ EFWY
Sbjct: 173 VSDHIVELTPTWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFEDCEFWY 232

Query: 258 VDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKA 317
           VDQGILA E DGS+S  R LQRQEEKWWLPVPRVP GGL EN+R+QLQHKR+ TNQILKA
Sbjct: 233 VDQGILAPETDGSSSLERMLQRQEEKWWLPVPRVPPGGLQENSRRQLQHKRESTNQILKA 292

Query: 318 AMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQA 377
           AMAINS TLAD+E+PE Y E+LPKNGR  LGDLIYRYISSD FSPE LL+CL++SSEHQA
Sbjct: 293 AMAINSTTLADLEIPEPYLEALPKNGRACLGDLIYRYISSDHFSPECLLDCLEMSSEHQA 352

Query: 378 TEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLL 437
           TEIANRVEA++YVWRKRTNSKPA +TT+ SSKSSW +VKE +VD+EKRELLA+RAE+LLL
Sbjct: 353 TEIANRVEASIYVWRKRTNSKPATNTTKQSSKSSWEMVKELMVDSEKRELLAERAETLLL 412

Query: 438 CLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKH 497
           CLKQ FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFN+VARIDDLLYVDDLTKH
Sbjct: 413 CLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKH 472

Query: 498 SD-SFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA-LVSPAKGDISPFRTS 555
           SD   S +SK G+I+HK+  + + VP S TPYK+ FATP+ SPA   SPAKG+ SPF   
Sbjct: 473 SDHQLSSISKLGVISHKNSPLHFPVPISGTPYKTPFATPSFSPAQTASPAKGERSPFIPG 532

Query: 556 SKIPQRGMGVKKALTDYLSIENK-GKDYSNSIDEADSTLNIIREASPSQTETESFECTKK 614
           +KIPQRG GVKK LTDYLS+E + GK+ SN I++A+   N       S+ E ++ +    
Sbjct: 533 TKIPQRGFGVKKVLTDYLSVEARGGKELSNKIEKAEPITN-------SKLERQASQYRGG 585

Query: 615 AVSSPTKNRVVEE 627
             SSP +  VVEE
Sbjct: 586 VASSPRQRSVVEE 598

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449485047|ref|XP_004157057.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis sativus]

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/613 (70%), Positives = 493/613 (80%), Gaps = 22/613 (3%)

Query: 22  MEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQSH 81
           ME   +EK++ I  I  E         ET G  IEE GRESSSSSDFLTSETTG EE SH
Sbjct: 1   MEESLIEKSQTIGHIVLEN--------ETLGHLIEEHGRESSSSSDFLTSETTGLEEHSH 52

Query: 82  SSSEESSSPPLGWP-VQKAEAQDSSSVDGNEKIEKSRLD---LEKKGSTLPDVEMMKERF 137
           S SE+SSSP       +KAEA D    +G    +K+ +D   LEKK S+  ++EMMKERF
Sbjct: 53  SGSEDSSSPSSSSWSTRKAEAPDCIKANGVVNGDKNHVDNRKLEKKVSSSSEIEMMKERF 112

Query: 138 AKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLC 197
           +KLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPLP EKK MWRREM+W LC
Sbjct: 113 SKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPSEKKLMWRREMDWLLC 172

Query: 198 VSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWY 257
           VSDHIVELTP+WQTFPDGSKLEVMTCRPRSDLY+NLPALRKLDNMLLEILDSFE+ EFWY
Sbjct: 173 VSDHIVELTPTWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFEDCEFWY 232

Query: 258 VDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKA 317
           VDQGILA E DGS+S  R LQRQEEKWWLPVPRVP GGL EN+R+QLQHKR+ TNQILKA
Sbjct: 233 VDQGILAPETDGSSSLERMLQRQEEKWWLPVPRVPPGGLQENSRRQLQHKRESTNQILKA 292

Query: 318 AMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQA 377
           AMAINS TLAD+E+PE Y E+LPKNGR  LGDLIYRYISSD FSPE LL+CL++SSEHQA
Sbjct: 293 AMAINSTTLADLEIPEPYLEALPKNGRACLGDLIYRYISSDHFSPECLLDCLEMSSEHQA 352

Query: 378 TEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLL 437
           TEIANRVEA++YVWRKRTNSKPA +TT+ SSKSSW +VKE +VD+EKRELLA+RAE+LLL
Sbjct: 353 TEIANRVEASIYVWRKRTNSKPATNTTKQSSKSSWEMVKELMVDSEKRELLAERAETLLL 412

Query: 438 CLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKH 497
           CLKQ FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFN+VARIDDLLYVDDLTKH
Sbjct: 413 CLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKH 472

Query: 498 SD-SFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA-LVSPAKGDISPFRTS 555
           SD   S +SK G+I+HK+  + + VP S TPYK+ FATP+ SPA   SPAKG+ SPF   
Sbjct: 473 SDHQLSSISKLGVISHKNSPLHFPVPISGTPYKTPFATPSFSPAQTASPAKGERSPFIPG 532

Query: 556 SKIPQRGMGVKKALTDYLSIENK-GKDYSNSIDEADSTLNIIREASPSQTETESFECTKK 614
           +KIPQRG GVKK LTDYLS+E + GK+ SN I++A+   N       S+ E ++ +    
Sbjct: 533 TKIPQRGFGVKKVLTDYLSVEARGGKELSNKIEKAEPITN-------SKLERQASQYRGG 585

Query: 615 AVSSPTKNRVVEE 627
             SSP +  VVEE
Sbjct: 586 VASSPRQRSVVEE 598

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520923|ref|XP_003529109.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine max]

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/613 (69%), Positives = 501/613 (81%), Gaps = 11/613 (1%)

Query: 20  ATMEGLNV--EKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHE 77
           A MEGL++  + TE +EE    +  EN S+ ETF + IEEKGRESS SS+FL+SETT  E
Sbjct: 26  AAMEGLSLAEKSTEAVEE--SNKGIENGSKRETFADLIEEKGRESSFSSEFLSSETTHGE 83

Query: 78  EQSHSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRL-----DLEKKGSTLPDVEM 132
               S+ + SSSP +GWPVQ+  A D +S  G+E  EK  L     + EK+ S LP+VEM
Sbjct: 84  HSRSSTEDSSSSPSVGWPVQEIAASDCASPHGSEDGEKKHLVLENKEFEKRVSALPEVEM 143

Query: 133 MKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREM 192
           MKERFAKLLLGEDMSGCGNGV+TALAISNAITNLCATLFGQLWRLEPL  EKKAMWRRE+
Sbjct: 144 MKERFAKLLLGEDMSGCGNGVTTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREI 203

Query: 193 EWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFEN 252
           EWFL VSDHIVELTP+WQTFPDGSKLEVMTCRPRSDLY+NLPALRKLDNMLLEILDSF N
Sbjct: 204 EWFLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVN 263

Query: 253 TEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTN 312
           TEFWY+DQG+LA +ADG +SFR+ALQRQEEKWWLPVPRVP  GL+EN+RKQLQHKRD TN
Sbjct: 264 TEFWYIDQGVLAPDADGPSSFRQALQRQEEKWWLPVPRVPPCGLNENSRKQLQHKRDSTN 323

Query: 313 QILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLS 372
           QILKAAMAINSITLA+M++PESY ESLPKN RVSLGD+IYRYI+SD FSPE LL CLDLS
Sbjct: 324 QILKAAMAINSITLAEMDIPESYLESLPKNARVSLGDVIYRYITSDHFSPECLLACLDLS 383

Query: 373 SEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRA 432
           SEHQA EIANR EA+MY+WRKRTNSKPA+ + RSSS++SW +VK+ +VD +KR+L A+RA
Sbjct: 384 SEHQAIEIANRAEASMYIWRKRTNSKPASISARSSSRTSWEMVKDLMVDADKRDLFAERA 443

Query: 433 ESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVD 492
           ESLLL LKQ FPGLPQT LDMSKIQYNKD+GK+ILESYSRVLESLAFN+VARIDD+LYVD
Sbjct: 444 ESLLLSLKQRFPGLPQTALDMSKIQYNKDIGKAILESYSRVLESLAFNMVARIDDVLYVD 503

Query: 493 DLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA--LVSPAKGDIS 550
           DLTK+ D  S +SK G++ HKSIS+P+SVP   TPYKSAF TPTLSPA  + SPAK   S
Sbjct: 504 DLTKNLDKISSLSKVGVVTHKSISVPHSVPIPGTPYKSAFGTPTLSPAHGISSPAKLGKS 563

Query: 551 PFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETESFE 610
           P    S +PQRG G+KK+LTD+LSI+ KGK+  +SI++     N + E +  +T+ ES +
Sbjct: 564 PLINDSSLPQRGSGIKKSLTDFLSIDPKGKESGSSIEKQVPESNTLDEVTTCETDVESSD 623

Query: 611 CTKKAVSSPTKNR 623
           CT+   S    +R
Sbjct: 624 CTEGGASPSILDR 636

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140321|ref|XP_002323531.1| predicted protein [Populus trichocarpa] gi|222868161|gb|EEF05292.1| predicted protein [Populus trichocarpa]

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/496 (78%), Positives = 434/496 (87%), Gaps = 5/496 (1%)

Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
           + EMMKERF+KLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPL  EKKAMW
Sbjct: 7   ETEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLAPEKKAMW 66

Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
           RREMEWFLCVSDH+VEL PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD
Sbjct: 67  RREMEWFLCVSDHVVELMPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 126

Query: 249 SFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKR 308
           SF+NTEFWY+DQGILA +ADGS SFRR LQRQEEKWWLPVPRVP GGLHEN+RKQLQHKR
Sbjct: 127 SFDNTEFWYIDQGILAPDADGSASFRRTLQRQEEKWWLPVPRVPPGGLHENSRKQLQHKR 186

Query: 309 DCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLEC 368
           D TNQILKAAMAINSIT++DME+PESY ++LPKNG+ SLGDLIYR ISSDQF PE LL+C
Sbjct: 187 DSTNQILKAAMAINSITISDMEIPESYMDALPKNGKASLGDLIYRCISSDQFYPECLLDC 246

Query: 369 LDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELL 428
           LDLSSE  A E+ANRVEA++Y+WRK+TNSKP NST RSSSKSSW L+KE ++D +KR+LL
Sbjct: 247 LDLSSELLAIELANRVEASIYMWRKKTNSKPVNSTNRSSSKSSWELMKELMIDVDKRDLL 306

Query: 429 ADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 488
           ADRAESLLLCLKQ FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL
Sbjct: 307 ADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 366

Query: 489 LYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA-LVSPAKG 547
           LYVDDLTKHSD FS +SK  +IAHKS++IPYSVP S++PYK+AF TP+ SP   +SP KG
Sbjct: 367 LYVDDLTKHSDHFSSISKVSVIAHKSVTIPYSVPASNSPYKTAFTTPSFSPGQRISPVKG 426

Query: 548 DISPFRTSSKIPQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETE 607
           D SPF TS KIPQ G+GVKK LTDYLSI+ KG+D   +I+  D   N+IR    SQ   E
Sbjct: 427 DRSPFMTSGKIPQHGLGVKKVLTDYLSIDTKGRDGGITIEGTD---NVIRNTPASQIGIE 483

Query: 608 SFECTKKAVSSPTKNR 623
           SF    + +S+P +NR
Sbjct: 484 SFGSILETISTP-ENR 498

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090819|ref|XP_002309095.1| predicted protein [Populus trichocarpa] gi|222855071|gb|EEE92618.1| predicted protein [Populus trichocarpa]

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/448 (85%), Positives = 411/448 (91%), Gaps = 2/448 (0%)

Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
           + EMMKERF+KLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPLPLEKKAMW
Sbjct: 1   ETEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 60

Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
           RREMEW LCVSDHIVEL PSWQTFPDGSKLEVMTC PRSDLYINLPALRKLDNMLLEILD
Sbjct: 61  RREMEWLLCVSDHIVELMPSWQTFPDGSKLEVMTCGPRSDLYINLPALRKLDNMLLEILD 120

Query: 249 SFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKR 308
           SF+NTEFWYVDQGILA + DGS SFRR LQRQEEKWWLPVP+VP GGLHEN+RK+LQHKR
Sbjct: 121 SFDNTEFWYVDQGILAPDTDGSASFRRTLQRQEEKWWLPVPQVPPGGLHENSRKKLQHKR 180

Query: 309 DCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLEC 368
           D TNQILKAAMAINSITLA+ME+PESY E+LPKNG+ SLGDLIYRYISSDQF PE LL+C
Sbjct: 181 DSTNQILKAAMAINSITLAEMEIPESYLEALPKNGKASLGDLIYRYISSDQFYPECLLDC 240

Query: 369 LDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELL 428
           LDLSSEHQA E+ANRVEA++Y+WRKRTN KPA+ST RSSSKSSW LVKE ++D +KRELL
Sbjct: 241 LDLSSEHQAIELANRVEASIYIWRKRTNYKPASSTNRSSSKSSWELVKELMIDADKRELL 300

Query: 429 ADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 488
           ADRAESLLLCLKQ FPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL
Sbjct: 301 ADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 360

Query: 489 LYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA--LVSPAK 546
           LYVDDLTKHSD FS +SK  +IAHKS++IPYSVP S+TPYK+AF TP+ SP    +SPAK
Sbjct: 361 LYVDDLTKHSDHFSSISKVSVIAHKSVTIPYSVPVSNTPYKTAFNTPSFSPGQQRISPAK 420

Query: 547 GDISPFRTSSKIPQRGMGVKKALTDYLS 574
           GD SPF TS KIPQRG+GVKK LT+YLS
Sbjct: 421 GDRSPFMTSGKIPQRGLGVKKVLTEYLS 448

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|332688637|gb|AEE89671.1| RopGEF7a [Medicago truncatula]

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/567 (71%), Positives = 467/567 (82%), Gaps = 18/567 (3%)

Query: 22  MEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQS- 80
           MEGL++         K+EE    V + ETF + IEEKG ESSSSS+FL+SE  G+EE S 
Sbjct: 1   MEGLSLAD-------KNEE--NGVGKRETFCDLIEEKGCESSSSSEFLSSENVGNEEHSM 51

Query: 81  --HSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRL---DLEKKGSTLPDVEMMKE 135
              +  + SSSP LGW V++    D  SV  +E  +K  L   +  K+ S L ++EMMKE
Sbjct: 52  SSSTEVDSSSSPSLGWNVKEISESDCISVHDSEDGKKKHLVEKEFVKQVSALSEIEMMKE 111

Query: 136 RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWF 195
           RFAKLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPL  EKKAMWRREMEWF
Sbjct: 112 RFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWF 171

Query: 196 LCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEF 255
           L VSDHIVELTP+WQTFPDGSKLEVMTCRPRSDLY+NLPALRKLDNMLLEI DSF +TEF
Sbjct: 172 LSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDTEF 231

Query: 256 WYVDQGILASEADGS-TSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQI 314
           WYVDQG++A +A  S +SFR+ALQRQEEKWWLPVPRVP  GLHE +RKQLQHKRDCT+QI
Sbjct: 232 WYVDQGVIAPDAGTSPSSFRQALQRQEEKWWLPVPRVPPCGLHEKSRKQLQHKRDCTSQI 291

Query: 315 LKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSE 374
           LKAAMAINSITLA+M++PESY ESLPKN R+SLGD+I+RYI+SD FSPE LL CLDLSSE
Sbjct: 292 LKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHRYITSDHFSPECLLACLDLSSE 351

Query: 375 HQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAES 434
           HQA EIANR EA+MY+WRK+TNSKPA+ + RSSS++SW +VK+ +VD +KREL A+RAE+
Sbjct: 352 HQAIEIANRAEASMYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMVDADKRELFAERAET 411

Query: 435 LLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDL 494
           LLL LKQ FPGLPQT LDMSKIQYNKDVGK+ILESYSRVLESLAFN+V+RIDD+LYVDDL
Sbjct: 412 LLLTLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVSRIDDVLYVDDL 471

Query: 495 TKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPA-LVSPAKGDISP-F 552
           TK+SD FS  SK G+I  KSIS+PYSVP  +TPYKSAF TPT SPA  +SP+KG  SP  
Sbjct: 472 TKNSDQFSSHSKVGVITRKSISVPYSVPVPTTPYKSAFGTPTRSPAHAISPSKGGKSPLL 531

Query: 553 RTSSKIPQRGMGVKKALTDYLSIENKG 579
              +K PQRG+GVKK+LTD+LSI+ KG
Sbjct: 532 NNGNKTPQRGVGVKKSLTDFLSIDAKG 558

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505757|ref|XP_003623167.1| Rop guanine nucleotide exchange factor [Medicago truncatula] gi|355498182|gb|AES79385.1| Rop guanine nucleotide exchange factor [Medicago truncatula]

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/583 (69%), Positives = 468/583 (80%), Gaps = 33/583 (5%)

Query: 21  TMEGLNVEKTEGIEEIKHEEFRENVSRVETFGESIEEKGRESSSSSDFLTSETTGHEEQS 80
           TMEGL++         K+EE    V + ETF + IEEKG ESSSSS+FL+SE  G+EE S
Sbjct: 79  TMEGLSLAD-------KNEE--NGVGKRETFCDLIEEKGCESSSSSEFLSSENVGNEEHS 129

Query: 81  ---HSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEKSRL---DLEKKGSTLPDVEMMK 134
               +  + SSSP LGW V++    D  SV  +E  +K  L   +  K+ S L ++EMMK
Sbjct: 130 MSSSTEVDSSSSPSLGWNVKEISESDCISVHDSEDGKKKHLVEKEFVKQVSALSEIEMMK 189

Query: 135 ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEW 194
           ERFAKLLLGEDMSGCGNGV TALAISNAITNLCATLFGQLWRLEPL  EKKAMWRREMEW
Sbjct: 190 ERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEW 249

Query: 195 FLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTE 254
           FL VSDHIVELTP+WQTFPDGSKLEVMTCRPRSDLY+NLPALRKLDNMLLEI DSF +TE
Sbjct: 250 FLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDTE 309

Query: 255 FWYVDQGILASEADGS-TSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQ 313
           FWYVDQG++A +A  S +SFR+ALQRQEEKWWLPVPRVP  GLHE +RKQLQHKRDCT+Q
Sbjct: 310 FWYVDQGVIAPDAGTSPSSFRQALQRQEEKWWLPVPRVPPCGLHEKSRKQLQHKRDCTSQ 369

Query: 314 ILKAAMAINSITLADMEVPESYFESLPKN---------------GRVSLGDLIYRYISSD 358
           ILKAAMAINSITLA+M++PESY ESLPKN                R+SLGD+I+RYI+SD
Sbjct: 370 ILKAAMAINSITLAEMDIPESYLESLPKNKYNNGKIADLTFFQNARISLGDVIHRYITSD 429

Query: 359 QFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEF 418
            FSPE LL CLDLSSEHQA EIANR EA+MY+WRK+TNSKPA+ + RSSS++SW +VK+ 
Sbjct: 430 HFSPECLLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPASVSGRSSSRTSWEMVKDL 489

Query: 419 VVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLA 478
           +VD +KREL A+RAE+LLL LKQ FPGLPQT LDMSKIQYNKDVGK+ILESYSRVLESLA
Sbjct: 490 MVDADKRELFAERAETLLLTLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLA 549

Query: 479 FNIVARIDDLLYVDDLTKHSDSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLS 538
           FN+V+RIDD+LYVDDLTK+SD FS  SK G+I  KSIS+PYSVP  +TPYKSAF TPT S
Sbjct: 550 FNMVSRIDDVLYVDDLTKNSDQFSSHSKVGVITRKSISVPYSVPVPTTPYKSAFGTPTRS 609

Query: 539 PA-LVSPAKGDISP-FRTSSKIPQRGMGVKKALTDYLSIENKG 579
           PA  +SP+KG  SP     +K PQRG+GVKK+LTD+LSI+ KG
Sbjct: 610 PAHAISPSKGGKSPLLNNGNKTPQRGVGVKKSLTDFLSIDAKG 652

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	634
TAIR|locus:2185153	546	ROPGEF7 "ROP (rho of plants) g	0.705	0.818	0.718	4e-170
TAIR|locus:2153684	611	ROPGEF5 "ROP (rho of plants) g	0.840	0.872	0.590	1.9e-163
TAIR|locus:2121828	548	ROPGEF1 "ROP (rho of plants) g	0.662	0.766	0.586	2.2e-128
TAIR|locus:2078976	579	ROPGEF6 "ROP (rho of plants) g	0.736	0.806	0.547	1.4e-126
TAIR|locus:2126071	473	ROPGEF3 "ROP (rho of plants) g	0.623	0.835	0.563	8.2e-115
TAIR|locus:2198220	485	ROPGEF2 "ROP (rho of plants) g	0.613	0.802	0.544	8.1e-108
TAIR|locus:2050699	463	ROPGEF4 "ROP (rho of plants) g	0.591	0.809	0.502	5.6e-100
TAIR|locus:2180781	493	ROPGEF10 "ROP (rho of plants)	0.553	0.711	0.495	5.7e-91
TAIR|locus:2093467	576	ROPGEF13 "ROP (rho of plants)	0.586	0.645	0.465	3.6e-89
TAIR|locus:2028701	576	ROPGEF14 "ROP (rho of plants)	0.577	0.635	0.429	7.6e-80

TAIR|locus:2185153 ROPGEF7 "ROP (rho of plants) guanine nucleotide exchange factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1654 (587.3 bits), Expect = 4.0e-170, P = 4.0e-170
 Identities = 340/473 (71%), Positives = 378/473 (79%)

Query:   106 SVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITN 165
             ++DG +K  K R D     S + +VEMMKERF+KLLLGEDMSG GNGV TALAISNAITN
Sbjct:    54 NIDGEKK--KIRSD-----SRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITN 106

Query:   166 LCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRP 225
             LCATLFGQLWRLEPLP EKK MWRREMEW LCVSDHIVE+TP+WQTFPDG+KLE+MTCRP
Sbjct:   107 LCATLFGQLWRLEPLPTEKKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLEIMTCRP 166

Query:   226 RSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASE--ADGSTSFRRALQRQEEK 283
             RSDLY+NLPALRKLDNMLLEILDSFE TEFWYVDQGI+A E  ADGS+SFR++ QRQE+K
Sbjct:   167 RSDLYVNLPALRKLDNMLLEILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDK 226

Query:   284 WWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNG 343
             WWLPVPRV  GGL EN+RKQLQHKRDCTNQILKAAMAINSITLADME+PESY ESLP+ G
Sbjct:   227 WWLPVPRVSPGGLQENSRKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKG 286

Query:   344 RVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXX 403
             R  LGDLIYRYISSDQFSPE LL+CLDLSSEHQA EIANRVE+++Y+W KRTNSKPA   
Sbjct:   287 RSCLGDLIYRYISSDQFSPECLLDCLDLSSEHQAIEIANRVESSIYLWHKRTNSKPATNT 346

Query:   404 XXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVG 463
                     W +VKE +VD +K EL+ADRAESLLL LKQ FPGLPQT LDMSKIQYNKD+G
Sbjct:   347 KTS-----WEMVKELMVDADKLELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNKDIG 401

Query:   464 KSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSFSPMSKG--GMIAHKSISIPYSV 521
             KSILESYSRVLESLAFNIVARIDDLL+VDDLT+HS    P + G  G  A KSI++P S 
Sbjct:   402 KSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIPTTLGNNGNDAPKSIAVPVSN 461

Query:   522 PFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIPQRGMGVKKALTDYLS 574
                +TP  S       S   V P     SP R   KIP     VK+ LT Y++
Sbjct:   462 --YTTPSYSPSKQELRSSITVPP-----SPSRF--KIPHSS-SVKRVLTAYVT 504

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2153684 ROPGEF5 "ROP (rho of plants) guanine nucleotide exchange factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1591 (565.1 bits), Expect = 1.9e-163, P = 1.9e-163
 Identities = 329/557 (59%), Positives = 400/557 (71%)

Query:    90 PP---LGWPVQKAEAQDSSSVDGNEKIEKSRLD----LEKKGSTLPDVEMMKERFAKLLL 142
             PP   LGWP++KA  + +S    N   +K  L      + K     DVEMMKERFAKLLL
Sbjct:    56 PPSQILGWPIRKASFRKNSKESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLL 115

Query:   143 GEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHI 202
             GEDMSG G GV TALAISNAITNLCAT+FGQLWRLEPL  EKK MWRREMEW L VSDHI
Sbjct:   116 GEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHI 175

Query:   203 VELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGI 262
             VELTPS QT+PDG+K EVMTCRPR DL+INLPALRKLDNMLL+IL SF+ TEFWYVDQGI
Sbjct:   176 VELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDILASFKKTEFWYVDQGI 235

Query:   263 LASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAIN 322
             +ASE DGS SFRR +QRQEEKWWLPVPR+   GL E  R +L HKR+C  QILKAAMAIN
Sbjct:   236 VASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAIN 295

Query:   323 SITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIAN 382
             S+ L +M+VP+SY E+LPKNGR  LGD+IYRY++SD+FS E LL+CLDLSSEH A +IAN
Sbjct:   296 SLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIAN 355

Query:   383 RVEAAMYVWRKRTNSKPA--NXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLK 440
             RVEA++YVWR+R  +K    N          W +VKE +   +KR LL +R+E+LL CLK
Sbjct:   356 RVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLK 415

Query:   441 QWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDS 500
             Q FP L QT+LD+SKIQ+NKD+GKSILESYSR LESLA NI+ARIDDLLYVDDLTK SD 
Sbjct:   416 QRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDD 475

Query:   501 FSPMSK---GGMIAHKSI-SIPYSVPFSSTPYKSAFAT-PTLSPALVSPAKGDI-SPF-- 552
              + +S      +IAHK +  +PY +  S TPY+++F+T P  SP+++SP KG+  +P+  
Sbjct:   476 NNLLSSPAVSSIIAHKKVVPLPYLISASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSS 535

Query:   553 RTSSKI-----PQRGMGVKKALTDYLSIENKGKDYSNSIDEADSTLNIIREASPSQTETE 607
             + ++KI     P RG GV++ L +YL +E+K K   N  D AD+   +I + S    E +
Sbjct:   536 KDTNKIIEKGLPSRGYGVRRVLNNYLGMESKLKICVNPSDNADTA--VINQISKDVEEEK 593

Query:   608 SFECTKKAVSSPTKNRV 624
                 T      P K  V
Sbjct:   594 KRNSTSVHQKGPPKYTV 610

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2121828 ROPGEF1 "ROP (rho of plants) guanine nucleotide exchange factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
 Identities = 254/433 (58%), Positives = 317/433 (73%)

Query:   119 DLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLE 178
             D ++  + L ++EMMKERFAKLLLGEDMSG G GV TALAISNAITNL AT+FG+LWRLE
Sbjct:    80 DDKQPDNDLSEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLE 139

Query:   179 PLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRK 238
             PL  +KKAMWRRE+EW LCVSD IVEL PS Q FP G   E+M  RPRSDLY NLPAL+K
Sbjct:   140 PLAPQKKAMWRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKK 199

Query:   239 LDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHE 298
             LD ML+++LD+F +TEFWY D+GI+  + D  +    A  RQE+KWWLP P+VP  GL E
Sbjct:   200 LDAMLIDMLDAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSE 259

Query:   299 NTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSD 358
               RK+LQ  RD  NQILKAA+AINS  LA+ME+P+ Y E+LPK+G+  LG++IY+Y++++
Sbjct:   260 EARKKLQQCRDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTAN 319

Query:   359 QFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWG-LVKE 417
             +FSPE LL+CLDLSSEHQ  EIANR+EAA++VWR++   +  +          WG  VK 
Sbjct:   320 KFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRR--HKKQAKLKLSSWGGKVKG 377

Query:   418 FVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESL 477
              V D E+ + L  RAE+LL  L+  FPGLPQTTLDM+KIQYNKDVG+SILESYSRV+ES+
Sbjct:   378 LVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESM 437

Query:   478 AFNIVARIDDLLYVDDLTKHS----DSFSPMSKGGMIAHKSISIPYSVPFSSTPYKSAFA 533
             AFNI ARIDD+LYVDD  + S    +S S  S  G+   K+ S+       S+P+ S FA
Sbjct:   438 AFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAFSV------QSSPHGSPFA 491

Query:   534 TPTLSPALVSPAK 546
             TP LS A  SP +
Sbjct:   492 TPALSVASRSPRR 504

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0009860 "pollen tube growth" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

TAIR|locus:2078976 ROPGEF6 "ROP (rho of plants) guanine nucleotide exchange factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
 Identities = 280/511 (54%), Positives = 352/511 (68%)

Query:    92 LGWPVQKAEAQDSSSVDGNEKIEKSRLD---LEKKGSTLPDVEMMKERFAKLLLGEDMSG 148
             LGWP+ +   + SS     +K   +++D    ++ G+   ++E++KER AKLLLGEDMSG
Sbjct:    69 LGWPLGQGSWRKSSGK--MKKKTPTKIDDFGFKRVGTETSEIELLKERMAKLLLGEDMSG 126

Query:   149 CGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPS 208
              G GV  ALAISNAITNL A + GQ WRLEP+P EKK MWRRE+E  L VSDHIVEL PS
Sbjct:   127 SGEGVCPALAISNAITNLYAAILGQQWRLEPIPSEKKLMWRREIEVLLSVSDHIVELVPS 186

Query:   209 WQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEAD 268
             +Q FP+G+K+EVM CRPRSDL+  LPALRKLDNML+EILDSF  TEFWYVDQGI+A+E+ 
Sbjct:   187 FQNFPNGNKIEVMNCRPRSDLFTCLPALRKLDNMLIEILDSFGETEFWYVDQGIVAAESA 246

Query:   269 GSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLAD 328
              S SFR       +KWWLP+PRVP  GL E TRK+L H R+ TNQILKA M+INSI LA+
Sbjct:   247 RSNSFRE----DGDKWWLPLPRVPSDGLTEQTRKKLDHTREFTNQILKACMSINSIALAE 302

Query:   329 MEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLECLDLSSEHQATEIANRVEAAM 388
             MEVP+SY E+LPKNGR  LGD +YR I+SD FS ++LLE +DLSSE    E+ANRVEA+M
Sbjct:   303 MEVPQSYLEALPKNGRSCLGDFLYRNITSDNFSADHLLESIDLSSELAVVEMANRVEASM 362

Query:   389 YVWRKRTNSKPANXXXXXXXXXXWGL-VKEFVV---DTEKRELLADRAESLLLCLKQWFP 444
             YVWR+R +S+             WG+ VKE ++   D +KRE+ A+RAESLL+ LKQ FP
Sbjct:   363 YVWRRRAHSRHL-ISLYRSTSTRWGMIVKEMMMHQTDGDKREIFAERAESLLIRLKQRFP 421

Query:   445 GLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKH------- 497
             GL QT LD SKIQYNKDVGKSILESYSRVLESLA++I  RI+++L++DD++K        
Sbjct:   422 GLRQTALDTSKIQYNKDVGKSILESYSRVLESLAYSIGVRIEEVLFMDDISKDDGDGDDD 481

Query:   498 --SDSFSPMSK----GGMIA-HKSISIP--YSVPFSSTPYKSAFATP--TLSPALVSPAK 546
               SD    +SK    GG  +  + +S P  +SV FS T      +TP  TLS +  +P+ 
Sbjct:   482 SCSDKLRLLSKEAASGGSGSLREKLSAPSLFSVSFSGT------STPYRTLSFSASTPS- 534

Query:   547 GDISPFRTSSKIPQRGMGVKKALTDYLSIEN 577
                SP    S I   G G ++A   +LS  N
Sbjct:   535 --YSPMPLISPI-NGGRGGERA--PFLSGRN 560

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2126071 ROPGEF3 "ROP (rho of plants) guanine nucleotide exchange factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
 Identities = 236/419 (56%), Positives = 307/419 (73%)

Query:    91 PLGWPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCG 150
             P  WPV   E++ S  + G E      L +++     P++E MKERFAKLLLGEDMSG G
Sbjct:    69 PCNWPVL-TESKSSKCLSGLEMQSNECLVVQEISE--PELETMKERFAKLLLGEDMSGSG 125

Query:   151 NGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQ 210
              GV TA+ ISNAITNL AT+FGQ  RLEPL  EK+A+W+REM   L V D+IVE  P  Q
Sbjct:   126 KGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALWKREMNCLLSVCDYIVEFIPRCQ 185

Query:   211 TFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASE-ADG 269
                +G+ +EVM  RPR+D+YINLPALRKLD+ML+E LDSF+NTEFWY ++G L+ + A  
Sbjct:   186 NLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQNTEFWYAEEGSLSMKSARS 245

Query:   270 ST-SFRRAL-QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLA 327
             ST SFR+ + QR+EEKWWLPVP VP  GL +  RKQL++KR+ TNQI KAAMAINS  L+
Sbjct:   246 STGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARKQLKNKRESTNQIHKAAMAINSSILS 305

Query:   328 DMEVPESYFESLPKNGRVSLGDLIYRYIS-SDQFSPEYLLECLDLSSEHQATEIANRVEA 386
             +ME+P+SY  +LPK G+ S+GD IYRY+S S +F PE LL+CL++SSEH+A ++A+RVEA
Sbjct:   306 EMEIPDSYMTTLPKCGKSSVGDSIYRYMSGSGRFFPEQLLDCLNISSEHEAVQLADRVEA 365

Query:   387 AMYVWRKRT---NSKPANXXXXXXXXXXWGLVKEFVVDTEKRE---LLADRAESLLLCLK 440
             +MY WR+++   NSK +           W +VK+ +  TE+ +   ++A+RAE+LL CLK
Sbjct:   366 SMYTWRRKSCLSNSKNS-----------WNMVKDLMSTTERTDKNYVMAERAETLLFCLK 414

Query:   441 QWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
             Q +P L QT+LD+ KIQYNKDVGK++LESYSRVLE LAFNIVA IDD+LYVD   + S+
Sbjct:   415 QRYPELSQTSLDICKIQYNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2198220 ROPGEF2 "ROP (rho of plants) guanine nucleotide exchange factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
 Identities = 228/419 (54%), Positives = 297/419 (70%)

Query:    91 PLGWPVQKAEAQDSSSVD-------GNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLG 143
             P  WPV   E+ +S+S +        + +IE     L  +  + P++E MKERF+KLLLG
Sbjct:    73 PSDWPVL-TESNNSASSNFPTVFDLKHNQIETDE-HLAVQEISEPELETMKERFSKLLLG 130

Query:   144 EDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIV 203
             EDMSG G GV TA+ ISNAITNL AT+FGQ  RLEPL +E+K  W+REM   L V D+I 
Sbjct:   131 EDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIF 190

Query:   204 ELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGIL 263
             E  P  Q   +G+ +EVM  RPR+D+YINLPALRKLD+ML+E LDSF+ TEFWY ++G L
Sbjct:   191 EFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSL 250

Query:   264 ASEADGST--SFRRAL-QRQEEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMA 320
             + ++  S   SFR+ + QR+EEKWWLP+P VPL GL E  RKQL+ KR+ TNQI KAAMA
Sbjct:   251 SMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMA 310

Query:   321 INSITLADMEVPESYFESLPKNGRVSLGDLIYRYI-SSDQFSPEYLLECLDLSSEHQATE 379
             INS  L +M++P+SY  +LPK+G+ S GD IYR++ SS +FSPE LL+ L + SEH+A +
Sbjct:   311 INSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQ 370

Query:   380 IANRVEAAMYVWRKRT---NSKPANXXXXXXXXXXWGLVKEFVVDTEKRE---LLADRAE 433
             +A+RVEA+MY WR++    NSK +           W +VK+ +  TE+ +   +LA+RAE
Sbjct:   371 LADRVEASMYTWRRKACLNNSKSS-----------WNMVKDLMSITERSDKNYVLAERAE 419

Query:   434 SLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVD 492
             SLL CLKQ +P L QT+LD+ KI  NKDVGK++LESYSRVLE LAFNIVA IDD+LYVD
Sbjct:   420 SLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVD 478

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2050699 ROPGEF4 "ROP (rho of plants) guanine nucleotide exchange factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 202/402 (50%), Positives = 285/402 (70%)

Query:   108 DGNEKIEKSRLDLEKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLC 167
             DG+E  E S +D  +      ++EMM+ERFAKLLLGEDMSG G GV TA+ +SN+ITNL 
Sbjct:    78 DGDE--EDSDIDSAEDA----ELEMMRERFAKLLLGEDMSGSGKGVCTAVTVSNSITNLY 131

Query:   168 ATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRS 227
             AT+FGQ  RL+PL  EKK +W+REM  F+ + D+IVE+ P  ++   G+ +E+   + RS
Sbjct:   132 ATVFGQSLRLQPLSTEKKDLWKREMNCFMSICDYIVEVIP--RSL--GTNVEITETKLRS 187

Query:   228 DLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADG----STSFRRAL-QRQEE 282
             D+ ++LPALRKLDNML+EILDSF   EFWYV++G  +  + G    S +FR+ + QR++E
Sbjct:   188 DILMSLPALRKLDNMLMEILDSFTENEFWYVERGSSSMNSGGGGRDSGTFRKVVVQRKDE 247

Query:   283 KWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKN 342
             KWWLPVP VP  GL E  RK L+HKRDC +QI KAA+AIN  TL DM++P+SY  +LPK+
Sbjct:   248 KWWLPVPCVPAEGLSEEERKHLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKS 307

Query:   343 GRVSLGDLIYRYI-SSDQFSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPAN 401
             G+ S+GD+IY+ + ++++F P+ LL+ L ++SEH+A E+A++VEA++  WR++T      
Sbjct:   308 GKASVGDVIYKQLCTAEKFYPDQLLDILKITSEHEALELADKVEASLVTWRRKTGG---- 363

Query:   402 XXXXXXXXXXWGLVKEFVVDTE----KRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQ 457
                       W ++K+   D +    K  +LA RA SLL CLKQ +P L QT+LD+ KIQ
Sbjct:   364 ---LTHSKSSWDMMKDISGDADRGNDKNHILAARARSLLFCLKQRYPELSQTSLDICKIQ 420

Query:   458 YNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
             +N+DVGK++LESYSRVLE LA+N+V+ IDD+LYVD   ++ D
Sbjct:   421 FNRDVGKAVLESYSRVLEGLAYNVVSWIDDVLYVDRTVRNRD 462

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0009531 "secondary cell wall" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=IMP

TAIR|locus:2180781 ROPGEF10 "ROP (rho of plants) guanine nucleotide exchange factor 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
 Identities = 183/369 (49%), Positives = 258/369 (69%)

Query:   129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
             D+E+MKERFAKLLLGEDMSG G G ++ALA+SNAIT L  ++FG+  +L+P+  E K  W
Sbjct:    44 DMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKENW 103

Query:   189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
             R+EM W L V DHIV+  PS Q   +G   E+M  + R DL  N+PALRKLD++LLE LD
Sbjct:   104 RKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVTKQRDDLLTNIPALRKLDSVLLETLD 163

Query:   249 SFENT-EFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
             +F++  +FWYV + +   +AD +  +RR     +E WWLPV +VP  GL E +R+ LQ++
Sbjct:   164 NFKDQKDFWYVPRDM--EDADHNGDWRR-----DENWWLPVVKVPTDGLSEESRRWLQNQ 216

Query:   308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
             +D   Q+LKAA AIN+  L++M VPE+Y +SLPKNG+ SLGD +Y+ I+ + F P+Y + 
Sbjct:   217 KDSVAQVLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSITEESFDPDYFVS 276

Query:   368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKREL 427
              LDLS+EH+  ++ NR+EA+M +W+++   K  +          WG      V  EKREL
Sbjct:   277 FLDLSTEHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQ------WGST----VSLEKREL 326

Query:   428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
                RAE++L+ LKQ FPG+PQ++L++SKI+ NKDVG++ILESYSRVLESLA  I++RI+D
Sbjct:   327 FEVRAETILVMLKQQFPGIPQSSLEVSKIKNNKDVGQAILESYSRVLESLASKIMSRIED 386

Query:   488 LLYVDDLTK 496
             +L  D L +
Sbjct:   387 VLEADRLVQ 395

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2093467 ROPGEF13 "ROP (rho of plants) guanine nucleotide exchange factor 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 186/400 (46%), Positives = 269/400 (67%)

Query:   110 NEKIEKSRLDLEKKG--------STLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISN 161
             NEK  + ++ L  +G        + + ++E MK++FAKLLLGEDMSG   GVS+ALA+SN
Sbjct:   101 NEKFTRDQVILRFRGLQAKSCYFAYVTELEQMKDKFAKLLLGEDMSGGSKGVSSALALSN 160

Query:   162 AITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVM 221
             AITNL A+ FG++ RLE +  +KK  WRRE+ W L V+DHIVE +P+ QT  DGS +EVM
Sbjct:   161 AITNLAASAFGEIRRLEAISEDKKERWRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVM 220

Query:   222 TCRPRSDLYINLPALRKLDNMLLEILDSFENT-EFWYVDQGILASEADGSTSFRRALQRQ 280
             T + R+DL  N+P+L+KLD MLL+ LD F++  EF+YV  G   SE   ST       R 
Sbjct:   221 TTKQRTDLVSNIPSLKKLDEMLLDCLDKFKDQDEFYYVTPGSPESENSNST-------RN 273

Query:   281 EEKWWLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLP 340
             ++KWWLP+ +VP  GL E  ++ L  +R+C  Q+L +AMAINS  L +ME+PESY +SLP
Sbjct:   274 DDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQVLNSAMAINSQVLTEMEIPESYIDSLP 333

Query:   341 KNGRVSLGDLIYRYISSDQFSPE-YLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKP 399
             K GR SLGD+IYR I+ + F  E +LLE +DLSSEH+  ++ N+ EA++ +W+++     
Sbjct:   334 KKGRASLGDMIYRMITLEMFDAEQFLLE-MDLSSEHKILDLKNKFEASVVIWQRKI---- 388

Query:   400 ANXXXXXXXXXXWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYN 459
                         W       +  +KR+ L +RA ++L  +KQ FPG+ Q+TLD+SKIQ+N
Sbjct:   389 --VQIDNKSSSPWSTN----LSMDKRQQLEERAATILQLIKQEFPGISQSTLDISKIQFN 442

Query:   460 KDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD 499
             +D+G +I+ESYSR+LESLA  +++RI+D+L  D LT++ +
Sbjct:   443 RDIGLAIVESYSRILESLAHTVMSRIEDVLEADQLTQNPE 482

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2028701 ROPGEF14 "ROP (rho of plants) guanine nucleotide exchange factor 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 161/375 (42%), Positives = 242/375 (64%)

Query:   129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
             DVE MKE+F+KLLLGED++G   GV  ALA+SNA+T+L  ++FG+LW+LEPL  EKK  W
Sbjct:   136 DVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKW 195

Query:   189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
             RREM+W L  +++++EL PS Q   +G  LE+MT + R+D+++NLPAL+KLD+ML+E LD
Sbjct:   196 RREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLD 255

Query:   249 SFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHKR 308
             S  NTEFWY + G  A   + STS       + ++WWLP P+VP  GL  + RK+L  K 
Sbjct:   256 SMVNTEFWYSEIGSRAEGKNKSTS-------ESKRWWLPSPQVPKPGLSNSGRKKLLDKG 308

Query:   309 DCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLEC 368
                 Q+ KA  AIN   L +M VP    E++PK+G+ SLGD +Y+ ++ +  + + +   
Sbjct:   309 KVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESATVDEIFIS 368

Query:   369 LDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKRELL 428
             L+L +EH A E  N++E+AM+ W++R   + +N          W   K+ + +  + E L
Sbjct:   369 LNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRAS--WSFAKDPLSEIGRNESL 426

Query:   429 ADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDL 488
              +RAE+L   +K   P LP + LD +KIQY+KD+G ++LE+YSR L +LAF I++R+ ++
Sbjct:   427 LNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRILSRMGEI 486

Query:   489 LYVDDLTKHSDSFSP 503
             L  D L+  +    P
Sbjct:   487 LKEDSLSNPNSPAPP 501

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0080092 "regulation of pollen tube growth" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	634
pfam03759	360	pfam03759, PRONE, PRONE (Plant-specific Rop nucleo	0.0

>gnl|CDD|217715 pfam03759, PRONE, PRONE (Plant-specific Rop nucleotide exchanger)

 Score =  666 bits (1721), Expect = 0.0
 Identities = 274/374 (73%), Positives = 319/374 (85%), Gaps = 16/374 (4%)

Query: 127 LPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKA 186
             ++E+MKERFAKLLLGEDMSG G GVSTALA+SNAITNL AT+FG+LWRLEPL  EKKA
Sbjct: 2   PSEMELMKERFAKLLLGEDMSGGGKGVSTALALSNAITNLAATVFGELWRLEPLAPEKKA 61

Query: 187 MWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEI 246
           MWRREM+W L V+D+IVE  PS QT PDG+ +EVMT RPRSDLY+NLPALRKLD MLLEI
Sbjct: 62  MWRREMDWLLSVTDYIVEFVPSKQTLPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLLEI 121

Query: 247 LDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQH 306
           LDSF++TEFWYVDQG L+       SFRR  QRQEEKWWLPVP+VP GGL E++RK+LQH
Sbjct: 122 LDSFKDTEFWYVDQGSLS-------SFRRKSQRQEEKWWLPVPKVPPGGLSESSRKKLQH 174

Query: 307 KRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLL 366
           KRDC NQILKAAMAINS  LA+ME+PESY ESLPKNGR SLGD IYRYI+SDQFSP+ LL
Sbjct: 175 KRDCVNQILKAAMAINSQVLAEMEIPESYIESLPKNGRASLGDAIYRYITSDQFSPDQLL 234

Query: 367 ECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWG-LVKEFVVDTEKR 425
           +CLDLSSEH+A E+ANR+EA+MY+WR++ ++K         SKSSWG  VK+ + D EKR
Sbjct: 235 DCLDLSSEHKALELANRIEASMYIWRRKAHTKD--------SKSSWGSAVKDLMADGEKR 286

Query: 426 ELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARI 485
           ELLA+RAE+LLLCLKQ FPGLPQT+LD+SKIQYNKDVG++ILESYSRVLESLAFNI++RI
Sbjct: 287 ELLAERAETLLLCLKQRFPGLPQTSLDISKIQYNKDVGQAILESYSRVLESLAFNIMSRI 346

Query: 486 DDLLYVDDLTKHSD 499
           DD+LY DDL K S+
Sbjct: 347 DDVLYADDLAKKSE 360

This is a functional guanine exchange factor (GEF) of plant Rho GTPase. Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	634
PF03759	365	PRONE: PRONE (Plant-specific Rop nucleotide exchan	100.0

>PF03759 PRONE: PRONE (Plant-specific Rop nucleotide exchanger); InterPro: IPR005512 In plants, the small GTP-binding proteins called Rops work as signalling switches that control growth, development and plant responses to various environmental stimuli

Probab=100.00  E-value=1.5e-199  Score=1490.60  Aligned_cols=363  Identities=77%  Similarity=1.221  Sum_probs=290.8

Q ss_pred             chhHHHHHHHHHHhhhccCCCCCCCchhhHHHHHHHHHHHHHhhhcceeccCCCChhHHhhhhhccceeeeccCeeEEee
Q 006718          127 LPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVELT  206 (634)
Q Consensus       127 ~sevEmMKERFAKLLLGEDMSGgGKGV~TALAiSNAITNL~AtVFGelwrLEPL~~ekK~mWrREmdwLLSVsD~IVElv  206 (634)
                      .+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+||||||||||||||||||||
T Consensus         2 ~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AtvFGe~~rLEPl~~ekk~~WrrEm~wLLsv~d~iVE~v   81 (365)
T PF03759_consen    2 PSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLAATVFGELWRLEPLSPEKKAMWRREMDWLLSVTDYIVELV   81 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTTBTTSSS-S--HHHHHHHHHHHHHHHHHTT--SSS---HHHHHHHHHHHHHHHGGGGG-EEEE
T ss_pred             chHHHHHHHHHHHHhccCCCCCCCCcccHHHHHHHHHHHHHHHHhhhhhccCCCChHHHHHHHHhcceeecchhhhhhcc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCCCCCEEEEEecccCcccccCchhHHhhHHHHHHHHhcCCCCeeEeeecCcccccCCCCcccccccccccccccc
Q 006718          207 PSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWL  286 (634)
Q Consensus       207 PS~Q~~~dG~~~EVMttrpRsDL~~NLPALrKLD~MLle~LDSF~dtEFWYvd~g~~~~~~d~~~s~r~~~~R~eeKWWL  286 (634)
                      |+||++|||+++|||+||||+|||||||||||||+||||+||||+|||||||++|+++ ++++++++|+..+||++||||
T Consensus        82 Ps~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLie~LDsf~dtEFwYv~~g~~~-~~~~~~~~~~~~~r~~~KWWL  160 (365)
T PF03759_consen   82 PSKQTFPDGTTMEVMTTRPRSDLYMNLPALRKLDAMLIEILDSFKDTEFWYVDQGIVA-DSDSSSSFRRSSQRQEEKWWL  160 (365)
T ss_dssp             EEEEE-TTS-EEEEEEEEE-HHHHTHHHHHHHHHHHHHHHHHTTCS-SSEE--TT-------SHHHHT------CCCTTS
T ss_pred             cceeecCCCceEEEEecCccchhhcCcHHHHHHHHHHHHHHHhCCCCeeEEecCCccc-ccccCccccCcccccCCcccC
Confidence            9999999999999999999999999999999999999999999999999999999988 778889999999999999999


Q ss_pred             cCCcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHhhhhhhccCCCchhHHhhcccCCCcchhhHHHHhhccCCCChHHHH
Q 006718          287 PVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLL  366 (634)
Q Consensus       287 P~P~VPp~GLSe~~RK~Lq~qrd~~nQIlKAAmAINs~vL~EMeVPe~Y~esLPKnGrasLGD~iYr~iT~d~Fspe~lL  366 (634)
                      |+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.||||||+|+|||||||
T Consensus       161 P~p~VP~~GLse~~rK~L~~~rd~~~QilKAAmaIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~~~Fspe~ll  240 (365)
T PF03759_consen  161 PVPRVPPNGLSEESRKWLQHQRDCVNQILKAAMAINSQVLAEMEIPESYLESLPKNGRASLGDSIYRYITSEQFSPEQLL  240 (365)
T ss_dssp             --EE--TT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---HHHHHCS-SSHHHHHHHHHHHHCTSSS--HHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhcccccHHHHHHHHhccCcCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCchhhhHHHHhhhHHHHHHHHHhhhcCCCCCCCCCCCCCCCc-ccccccccchhHHHHHHHHHHHHHHHHHhhCCC
Q 006718          367 ECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSW-GLVKEFVVDTEKRELLADRAESLLLCLKQWFPG  445 (634)
Q Consensus       367 ~~LdLsSEH~aLe~aNRvEAai~vWrrK~~~k~~~~~~~s~~ksSW-~~vKd~~~~~dKrellaeRAEtlL~~LKqRfPg  445 (634)
                      +||||||||+|||+||||||||||||||+++|        ++|+|| ++|||++++.|||++|++|||+||+||||||||
T Consensus       241 ~~ldlssEH~~le~~NRvEAai~vWrrK~~~k--------~~ksSWg~~vkdl~~~~dK~e~l~eRAEtlL~~LK~RfPg  312 (365)
T PF03759_consen  241 DCLDLSSEHKALELANRVEAAIYVWRRKICEK--------DSKSSWGSMVKDLMSDGDKRELLAERAETLLLCLKQRFPG  312 (365)
T ss_dssp             HTS--SSHHHHHHHHHHHHHHHHHHCH-----------------------------HHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             HhcccccHHHHHHHHHHHHHHHHHHHHHhcCC--------CCccchhhhcccccccchHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999986        578999 699999999999999999999999999999999


Q ss_pred             CCcchhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccCC
Q 006718          446 LPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHS  498 (634)
Q Consensus       446 LpQTsLD~sKIQyNKDVG~AILESYSRVLESLAfnI~sRIdDVL~~D~l~k~~  498 (634)
                      ||||+||++|||||||||||||||||||||||||||++|||||||+|++++++
T Consensus       313 l~QT~LD~~KIQyNkDVG~aILESYSRVLEsLAfnI~sRIdDVL~~D~~~~~~  365 (365)
T PF03759_consen  313 LPQTSLDISKIQYNKDVGQAILESYSRVLESLAFNILSRIDDVLYADDLTKNS  365 (365)
T ss_dssp             ----HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             CCchHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence            99999999999999999999999999999999999999999999999999753

Rop proteins (Rho of plants, Rac-like and atRac in Arabidopsis thaliana (Mouse-ear cress)) belong to the Rho family of Ras-related GTP-binding proteins that turn on signalling pathways by switching from a GDP-bound inactive to a GTP-bound active conformation. Activation depends on guanine nucleotide exchange factors (GEFs) that catalyse the otherwise slow GDP dissociation for subsequent GTP binding. The plant-specific RopGEFs represent a unique family of exchange factor that display no homology to any known RhoGEFs from animals and fungi. They comprise a highly conserved catalytic domain termed PRONE (plant-specific Rop nucleotide exchanger) with exclusive substrate specificity for members of the Rop family. The PRONE domain has been shown to be necessary and sufficient to promote nucleotide release from Rop [, , ]. The PRONE domain can be divided into three highly conserved subdomains separated by two short stretches of variable amino acid residues [, ]. It is approximately 370 residues in length and displays an almost all alpha-helical structure except for a beta-turn that protrudes from the main body of the molecule. The overall structure of the PRONE domain can be divided into two subdomains, the first one including helices alpha1-5 and alpha13, the second alpha6-12 [].; GO: 0005089 Rho guanyl-nucleotide exchange factor activity; PDB: 2NTX_B 2NTY_B 2WBL_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	634
2nty_A	365	Rop4-Gdp-Prone8 Length = 365		1e-109
2ntx_A	365	Prone8 Length = 365		1e-97

>pdb|2NTY|A Chain A, Rop4-Gdp-Prone8 Length = 365

Iteration: 1
 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/367 (51%), Positives = 263/367 (71%), Gaps = 20/367 (5%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
           D+EMMK+RFAKLLLGEDMSG G GVS+ALA+SNAITNL A++FG+  +L+P+P +++A W
Sbjct: 10  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARW 69
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
           ++E++W L V+DHIVE  PS QT  DG   E+M  R R DL +N+PALRKLD ML++ LD
Sbjct: 70  KKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLD 129
Query: 249 SFE-NTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
           +F  + EFWYV +       D     +    R  +KWWLP  +VP GGL E +R+ L  +
Sbjct: 130 NFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQ 182
Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
           +D   Q+ KAAMAIN+  L++ME+PESY +SLPKNGR SLGD IY+ I+ + F PE  L 
Sbjct: 183 KDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLA 242
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKREL 427
            LD+S+EH+  ++ NR+EA++ +W+++ ++K             WG      V  EKREL
Sbjct: 243 MLDMSTEHKVLDLKNRIEASVVIWKRKLHTKDTK--------SSWG----SAVSLEKREL 290
Query: 428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
             +RAE++L+ LKQ FPGLPQ++LD+SKIQ+NKDVG+++LESYSR+LESLA+ +++RI+D
Sbjct: 291 FEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIED 350
Query: 488 LLYVDDL 494
           +LY D L
Sbjct: 351 VLYTDTL 357

>pdb|2NTX|A Chain A, Prone8 Length = 365

Iteration: 1
 Score =  354 bits (908), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 182/367 (49%), Positives = 251/367 (68%), Gaps = 20/367 (5%)
Query: 129 DVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMW 188
           D E  K+RFAKLLLGED SG G GVS+ALA+SNAITNL A++FG+  +L+P P +++A W
Sbjct: 10  DXEXXKDRFAKLLLGEDXSGGGKGVSSALALSNAITNLAASIFGEQTKLQPXPQDRQARW 69
Query: 189 RREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILD 248
           ++E++W L V+DHIVE  PS QT  DG   E+   R R DL  N+PALRKLD  L++ LD
Sbjct: 70  KKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIXVTRQRGDLLXNIPALRKLDAXLIDTLD 129
Query: 249 SFE-NTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHENTRKQLQHK 307
           +F  + EFWYV +       D     +    R  +KWWLP  +VP GGL E +R+ L  +
Sbjct: 130 NFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRXLYFQ 182
Query: 308 RDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEYLLE 367
           +D   Q+ KAA AIN+  L++ E+PESY +SLPKNGR SLGD IY+ I+ + F PE  L 
Sbjct: 183 KDSVTQVQKAAXAINAQVLSEXEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLA 242
Query: 368 CLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANXXXXXXXXXXWGLVKEFVVDTEKREL 427
            LD S+EH+  ++ NR+EA++ +W+++ ++K             WG      V  EKREL
Sbjct: 243 XLDXSTEHKVLDLKNRIEASVVIWKRKLHTKDTK--------SSWG----SAVSLEKREL 290
Query: 428 LADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDD 487
             +RAE++L+ LKQ FPGLPQ++LD+SKIQ+NKDVG+++LESYSR+LESLA+ + +RI+D
Sbjct: 291 FEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVXSRIED 350
Query: 488 LLYVDDL 494
           +LY D L
Sbjct: 351 VLYTDTL 357

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	634
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	0.0
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A Length = 365

 Score =  572 bits (1474), Expect = 0.0
 Identities = 192/383 (50%), Positives = 270/383 (70%), Gaps = 20/383 (5%)

Query: 121 EKKGSTLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPL 180
           ++      D+EMMK+RFAKLLLGEDMSG G GVS+ALA+SNAITNL A++FG+  +L+P+
Sbjct: 2   KRSERQQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPM 61

Query: 181 PLEKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLD 240
           P +++A W++E++W L V+DHIVE  PS QT  DG   E+M  R R DL +N+PALRKLD
Sbjct: 62  PQDRQARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLD 121

Query: 241 NMLLEILDSF-ENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLHEN 299
            ML++ LD+F  + EFWYV +       D     +    R  +KWWLP  +VP GGL E 
Sbjct: 122 AMLIDTLDNFRGHNEFWYVSR-------DSEEGQQARNDRTNDKWWLPPVKVPPGGLSEP 174

Query: 300 TRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQ 359
           +R+ L  ++D   Q+ KAAMAIN+  L++ME+PESY +SLPKNGR SLGD IY+ I+ + 
Sbjct: 175 SRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEW 234

Query: 360 FSPEYLLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFV 419
           F PE  L  LD+S+EH+  ++ NR+EA++ +W+++ ++K         +KSSWG      
Sbjct: 235 FDPEQFLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTKD--------TKSSWG----SA 282

Query: 420 VDTEKRELLADRAESLLLCLKQWFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAF 479
           V  EKREL  +RAE++L+ LKQ FPGLPQ++LD+SKIQ+NKDVG+++LESYSR+LESLA+
Sbjct: 283 VSLEKRELFEERAETILVLLKQKFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAY 342

Query: 480 NIVARIDDLLYVDDLTKHSDSFS 502
            +++RI+D+LY D L       +
Sbjct: 343 TVMSRIEDVLYTDTLALKQTLLA 365

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 79.9 bits (196), Expect = 1e-15
 Identities = 80/485 (16%), Positives = 159/485 (32%), Gaps = 96/485 (19%)

Query: 15  VEEELATMEGLNVEKTEGIEEIKHEEFRENVSR-----VETFGESIEEKGRESSSSSD-- 67
           V++        ++   E I+ I   +   + +      + +  E + +K  E     +  
Sbjct: 38  VQDMP-----KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 68  FLTSETTGHEEQSHSSSEESSSPPLGWPVQKAEAQDSSSVDGNEKIEK---SRLDLEKKG 124
           FL S              E   P +    +    Q     + N+   K   SRL    K 
Sbjct: 93  FLMSPI----------KTEQRQPSM--MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK- 139

Query: 125 STLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPL-- 182
             L    +++ R AK +L + + G G          +     C   F   W    L L  
Sbjct: 140 --LRQA-LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV-QCKMDFKIFW----LNLKN 191

Query: 183 EKKAMWRREMEWFLCVSDHIVELTPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNM 242
                   EM   L       ++ P+W +  D S    +           L   +  +N 
Sbjct: 192 CNSPETVLEMLQKLL-----YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 243 LLEILDSFENTEFW-YVDQG--ILASEADGS-TSFRRALQRQEEKWWLPVPRVPLGGLHE 298
           LL +L + +N + W   +    IL +      T F  A         + +    +    +
Sbjct: 247 LL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH----ISLDHHSMTLTPD 301

Query: 299 NTRKQLQHKRDCTNQIL-KAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISS 357
             +  L    DC  Q L +  +  N   L+ + + ES  + L            +++++ 
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLS-I-IAESIRDGLATWDN-------WKHVNC 352

Query: 358 DQFSP--EYLLECLDLSSEHQATEIANRVEAAMY----VWRKRTNSK-PANSTTRSSSKS 410
           D+ +   E  L  L+  +E++           M+    V+    ++  P    +      
Sbjct: 353 DKLTTIIESSLNVLE-PAEYR----------KMFDRLSVFPP--SAHIPTILLSL----- 394

Query: 411 SWGLVKEFVVDTEKRELLADRAESLLLCLKQWFPG---LPQTTLDMS-KIQYNKDVGKSI 466
            W  V +  V      ++ ++     L  KQ       +P   L++  K++    + +SI
Sbjct: 395 IWFDVIKSDV-----MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449

Query: 467 LESYS 471
           ++ Y+
Sbjct: 450 VDHYN 454

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 6e-08
 Identities = 71/458 (15%), Positives = 132/458 (28%), Gaps = 152/458 (33%)

Query: 213 PDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFENT--EF----------WYVDQ 260
            D  K  +++      + ++  A+     +   +L   E    +F          + +  
Sbjct: 39  QDMPK-SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97

Query: 261 GILASEADGSTSFRRALQRQEEKWW--------LPVPRVPLGGLHENTRKQLQHKRDCTN 312
             + +E    +   R    Q ++ +          V R+     +   R+ L   R   N
Sbjct: 98  --IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP---YLKLRQALLELRPAKN 152

Query: 313 QIL-------KAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYIS-SDQFSPEY 364
            ++       K  +A++       +V +   +             I+ +++  +  SPE 
Sbjct: 153 VLIDGVLGSGKTWVALD--VCLSYKV-QCKMD----FK-------IF-WLNLKNCNSPET 197

Query: 365 LLE-----CLDLSSE-----HQATEIANRVEAA-----------MY---------VWRKR 394
           +LE        +          ++ I  R+ +             Y         V    
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ--- 254

Query: 395 TNSKPANS---------TTRSSSKS---SWGLVKEFVVDTEKRELLADRAESLLL-CLKQ 441
            N+K  N+         TTR    +   S        +D     L  D  +SLLL  L  
Sbjct: 255 -NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 442 WFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSDSF 501
               LP+   ++     N      I ES          + +A  D+  +V+      D  
Sbjct: 314 RPQDLPR---EVLTT--NPRRLSIIAESIR--------DGLATWDNWKHVN-----CDKL 355

Query: 502 SPMSKGGMIAHKSISIPYSVPFSSTPYKSAFATPTLSPALVSPAKGDISPFRTSSKIP-- 559
           +            I    +V               L PA        +S F  S+ IP  
Sbjct: 356 T----------TIIESSLNV---------------LEPAEYRKMFDRLSVFPPSAHIPTI 390

Query: 560 -----------QRGMGVKKALTDYLSIENKGKDYSNSI 586
                         M V   L  Y  +E + K+ + SI
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 75/571 (13%), Positives = 153/571 (26%), Gaps = 157/571 (27%)

Query: 7   VFCSTPE-----LVEEELAT-----MEGLNVE-KTEGIEEIKHEEFRE------------ 43
              S  E      VEE L       M  +  E +   +    + E R+            
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129

Query: 44  NVSRVETFGESIEEKGRESSSSSDF------------LTSETTGHEEQSHSSSEESSSPP 91
           NVSR++ +   + +   E   + +             +  +          S +      
Sbjct: 130 NVSRLQPY-LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC-------LSYKVQCKMD 181

Query: 92  LG--WPVQKAEAQDSSSVDGNEKIEKSRLDLEKKGSTLPD--------VEMMKERFAKLL 141
               W +         +V   E ++K    ++   ++  D        +  ++    +LL
Sbjct: 182 FKIFW-LNLKNCNSPETV--LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 142 LGEDMSGC----GNGVSTALAISNAITNLCATLF------------GQLWRLEPLPLEKK 185
             +    C     N V  A A  NA    C  L                     L     
Sbjct: 239 KSKPYENCLLVLLN-VQNAKAW-NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 186 AMWRRE-MEWFLCVSDHIVELTPS--WQTFPD-----GSKLEVMTCRPRSDLYINLPALR 237
            +   E     L   D   +  P     T P         +        +  ++N   L 
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 238 KLDNMLLEILDSFENTEFWYVDQGILASEADGSTSFRRALQRQEEKWWLPVPRVPLGGLH 297
            +    L +L+  E  +  +    +    A   T     L      W+  +    +  ++
Sbjct: 357 TIIESSLNVLEPAEYRKM-FDRLSVFPPSAHIPTI---LLSLI---WFDVIKSDVMVVVN 409

Query: 298 ENTRKQLQHKRDCTNQILKAAMAINSITLADMEVP------------ESY--FESLPKNG 343
           +  +  L  K+   + I     +I SI L +++V             + Y   ++   + 
Sbjct: 410 KLHKYSLVEKQPKESTI-----SIPSIYL-ELKVKLENEYALHRSIVDHYNIPKTFDSDD 463

Query: 344 RV--SLGDLIYRYIS-----------SDQFSPEYLLECLDLSSEHQATEIANRVEAAMYV 390
            +   L    Y +I               F   +    LD         +  ++      
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF----LDFRF------LEQKIRHDSTA 513

Query: 391 WRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKR--ELLAD------RAESLLLCLKQW 442
           W    +        +          K ++ D + +   L+        + E  L+C K  
Sbjct: 514 WNASGSILNTLQQLK--------FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY- 564

Query: 443 FPGLPQTTLDMSKIQYNKDVGKSILESYSRV 473
                    D+ +I    +      E++ +V
Sbjct: 565 --------TDLLRIALMAEDEAIFEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	634
2ntx_A	365	EMB|CAB41934.1, prone8; dimer, guanine nucleotide	100.0

>2ntx_A EMB|CAB41934.1, prone8; dimer, guanine nucleotide exchange factor, signaling protein; HET: MSE; 2.20A {Arabidopsis thaliana} PDB: 2nty_A* 2wbl_A

Probab=100.00  E-value=7.9e-196  Score=1459.07  Aligned_cols=355  Identities=54%  Similarity=0.950  Sum_probs=307.3

Q ss_pred             CchhHHHHHHHHHHhhhccCCCCCCCchhhHHHHHHHHHHHHHhhhcceeccCCCChhHHhhhhhccceeeeccCeeEEe
Q 006718          126 TLPDVEMMKERFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLEPLPLEKKAMWRREMEWFLCVSDHIVEL  205 (634)
Q Consensus       126 ~~sevEmMKERFAKLLLGEDMSGgGKGV~TALAiSNAITNL~AtVFGelwrLEPL~~ekK~mWrREmdwLLSVsD~IVEl  205 (634)
                      ..+|+||||||||||||||||||||||||||||||||||||||||||||||||||++|||+|||||||||||||||||||
T Consensus         7 ~~se~e~mKErFaKLLLGEDmSG~gkGV~tAlAiSNAITNL~AsvFGe~~rLEPl~~ekK~~WrrEmdwLLsv~d~IVE~   86 (365)
T 2ntx_A            7 QQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQARWKKEIDWLLSVTDHIVEF   86 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTSSCCSCCHHHHHHHHHHHHHHHHHTTC-CCCCCCHHHHHHHHHHHHHHHGGGGGCEEE
T ss_pred             CchHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHhhhhHHHHHHhhhhhccCCCChHHHHHHHHhcceeeeccceeEEe
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCCCCCEEEEEecccCcccccCchhHHhhHHHHHHHHhcCCC-CeeEeeecCcccccCCCCcccccccccccccc
Q 006718          206 TPSWQTFPDGSKLEVMTCRPRSDLYINLPALRKLDNMLLEILDSFEN-TEFWYVDQGILASEADGSTSFRRALQRQEEKW  284 (634)
Q Consensus       206 vPS~Q~~~dG~~~EVMttrpRsDL~~NLPALrKLD~MLle~LDSF~d-tEFWYvd~g~~~~~~d~~~s~r~~~~R~eeKW  284 (634)
                      |||||++|||+++|||+||||+|||||||||||||+||||+||||+| ||||||++|+     ++  +.++..|||++||
T Consensus        87 vPs~Q~~~dG~~~EvM~~r~RsDl~~NlPALrKLD~MLle~LDsf~d~tEFWYv~~g~-----~~--~~~~~~~r~eeKW  159 (365)
T 2ntx_A           87 VPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDS-----EE--GQQARNDRTNDKW  159 (365)
T ss_dssp             EEC----------CCEEEEECHHHHTHHHHHHHHHHHHHHHHHGGGSCCCCEEC--------------------------
T ss_pred             ccccccCCCCceEEEeeccccchhhcCcHHHHHHHHHHHHHHHhCCCCCeeEEecCCC-----Cc--cccCCcccccccc
Confidence            99999999999999999999999999999999999999999999999 9999999985     22  2367789999999


Q ss_pred             cccCCcCCCCCCChHHHHHHhhhhhhHHHHHHHHHHhhhhhhccCCCchhHHhhcccCCCcchhhHHHHhhccCCCChHH
Q 006718          285 WLPVPRVPLGGLHENTRKQLQHKRDCTNQILKAAMAINSITLADMEVPESYFESLPKNGRVSLGDLIYRYISSDQFSPEY  364 (634)
Q Consensus       285 WLP~P~VPp~GLSe~~RK~Lq~qrd~~nQIlKAAmAINs~vL~EMeVPe~Y~esLPKnGrasLGD~iYr~iT~d~Fspe~  364 (634)
                      |||+|||||+||||++||+|||||||||||||||||||++||+|||||++|+|+||||||+||||.||||||+|+|||||
T Consensus       160 WLP~p~VP~~GLSe~~RK~L~~qrd~~~QIlKAAmAIN~~vL~EMeiP~~y~esLPKnGrasLGd~iYr~it~d~Fspe~  239 (365)
T 2ntx_A          160 WLPPVKVPPGGLSEPSRRMLYFQKDSVTQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQ  239 (365)
T ss_dssp             -CCCEECCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHSCSCHHHHHCHHHHHHHTCSSCCHHH
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhHhHhhcCCCcHHHHHhcccccccccHHHHHHHHhhccCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCchhhhHHHHhhhHHHHHHHHHhhhcCCCCCCCCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHhhCC
Q 006718          365 LLECLDLSSEHQATEIANRVEAAMYVWRKRTNSKPANSTTRSSSKSSWGLVKEFVVDTEKRELLADRAESLLLCLKQWFP  444 (634)
Q Consensus       365 lL~~LdLsSEH~aLe~aNRvEAai~vWrrK~~~k~~~~~~~s~~ksSW~~vKd~~~~~dKrellaeRAEtlL~~LKqRfP  444 (634)
                      ||+||||||||+|||+|||||||||+||||++.|        ++|+||+++    ++.|||++|++|||+||+|||||||
T Consensus       240 ll~~ldlssEH~~le~anRiEAsi~vWrrk~~~k--------~~kssW~~~----~~~dK~~~l~eRAEtlL~~LKqRfP  307 (365)
T 2ntx_A          240 FLAMLDMSTEHKVLDLKNRIEASVVIWKRKLHTK--------DTKSSWGSA----VSLEKRELFEERAETILVLLKQKFP  307 (365)
T ss_dssp             HHHTSCCCSHHHHHHHHHHHHHHHHHHHHC--------------------------CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHhccCccHHHHHHHHHHHHHHHHHHHHhhcCC--------CCCCCCccc----cchhHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999875        478999985    5789999999999999999999999


Q ss_pred             CCCcchhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccCCC
Q 006718          445 GLPQTTLDMSKIQYNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD  499 (634)
Q Consensus       445 gLpQTsLD~sKIQyNKDVG~AILESYSRVLESLAfnI~sRIdDVL~~D~l~k~~~  499 (634)
                      |||||+||++|||||||||||||||||||||||||||++|||||||+|+++|++.
T Consensus       308 glpQTsLD~sKIQyNkDVG~aILESYSRvLesLAf~I~sRIdDvL~~D~~~~~~~  362 (365)
T 2ntx_A          308 GLPQSSLDISKIQFNKDVGQAVLESYSRILESLAYTVMSRIEDVLYTDTLALKQT  362 (365)
T ss_dssp             TCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCchHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc
Confidence            9999999999999999999999999999999999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00