Citrus Sinensis ID: 007126


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
ccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHcccHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcc
ccHHHHHHHHHHccccccccccHHHccccccccccHHHHHHHHHcccHcccccHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccHcHHHHHHHHHHHcccccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHEEEHHcccHHHHHHHHHHHHHHHHHHHcc
MSGARLCALLCElgyggadsldpdsfewpfqyddarpiLDWICsslrpsnvlslSELSQFEQFLQEEKLLEGEDLESAFDSISafssrrddqeavfgseegLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHyhsgdedgiylaysdfhpyllgdsssMKELNQWFSKqldsgpfrlvaeegkskcswvslgdesniLVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSqvasdeayihLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDvqeqgavddrdtfLHGVRDLLSIHSNaqaglstyvsapgiVQQISGLRADLTALQSDlenslpgdrnrCINELCTLIQSLQQLLFassttaqpiltprplmkELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISafssrrddqeavfgseeglkDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAAsdvqeqgavDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKneiikhhsqevglqrrVFVDFFCNPERLRSQVRELTARVRALQVS
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVlslselsqfeqflqeekllegeDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAqlqrqlrhlqcqFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
****RLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQF*******************************************************LQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADL*************LRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTP**L******MEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLR****************
***ARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLS***********************************************************************************************************************************************************************W**************************************************************************************************************************************************************************RHQFL***********************************************************************************************************************ELCTLIQSLQQ*************************************************************RVFVDFFCNPERLRSQVR*****V******
MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSIS*************GSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
*SGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRA****
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MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKExxxxxxxxxxxxxxxxxxxxxHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query617 2.2.26 [Sep-21-2011]
Q68CZ6603 HAUS augmin-like complex yes no 0.802 0.820 0.223 2e-19
Q6DCY9597 HAUS augmin-like complex N/A no 0.920 0.951 0.230 4e-18
Q8QZX2570 HAUS augmin-like complex yes no 0.766 0.829 0.208 7e-15
>sp|Q68CZ6|HAUS3_HUMAN HAUS augmin-like complex subunit 3 OS=Homo sapiens GN=HAUS3 PE=1 SV=1 Back     alignment and function desciption
 Score = 98.2 bits (243), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/554 (22%), Positives = 237/554 (42%), Gaps = 59/554 (10%)

Query: 3   GARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQ 62
           G      L ++GY  AD+L+ + F+W F+  +    L W C ++   NVLS  EL  F  
Sbjct: 4   GNEFVETLKKIGYPKADNLNGEDFDWLFEGVEDESFLKWFCGNVNEQNVLSERELEAF-S 62

Query: 63  FLQE--EKLLEGEDLESAFDSISAF---SSRRDDQEAVFGSEEGLKDIREATQAYRDEAA 117
            LQ+  + +LEG  L+ A  +       + R DD+E      E L+D  E     + +  
Sbjct: 63  ILQKSGKPILEGAALDEALKTCKTSDLKTPRLDDKEL-----EKLED--EVQTLLKLKNL 115

Query: 118 QLQRQLRHLQCQF-DMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVL 176
           ++QR+ +   CQ    +T+H S  +  +     AT  +     IL+  ++  + ++  + 
Sbjct: 116 KIQRRNK---CQLMASVTSHKSLRLNAKEEE--ATKKLKQSQGILNAMITKISNELQALT 170

Query: 177 GRIASTAQELAHYH--SGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLV 234
             +        H +   G    ++L+      YL  +  S   L  +  KQ   G   +V
Sbjct: 171 DEVTQLMMFFRHSNLGQGTNPLVFLSQFSLEKYLSQEEQSTAALTLYTKKQFFQGIHEVV 230

Query: 235 AEEGKSKCSWV-----SLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQV 289
               +     +     S+ D   IL          +R  E+ RL+  +  ++ Q +  + 
Sbjct: 231 ESSNEDNFQLLDIQTPSICDNQEIL---------EERRLEMARLQLAYICAQHQLIHLKA 281

Query: 290 ENAKQQAILMTLKSQVASDEAYIH------LDFHSLKRKHVELVGELSNLHHKEEKLLSE 343
            N+       ++KS +   E  +H      +D  +L  K   L  E+  L  +  ++   
Sbjct: 282 SNS-------SMKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKDR 334

Query: 344 TIPDLCWELAQLQDTYILQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLE 403
           ++P +  E AQL +  +++GD+DL++ +Q+ Y +RQ+  +N LI Q A  + L+L+  +E
Sbjct: 335 SLPAVVRENAQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIE 394

Query: 404 KRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAAS---DVQEQGAVDDRDTFLHG 460
            R     Y  L+ +  E    LS +   + + L ++   S    +  +  +D +D   H 
Sbjct: 395 LRKHRDIYRQLENLVQE----LSQSNMMLYKQLEMLTDPSVSQQINPRNTIDTKDYSTHR 450

Query: 461 VRDLLSIHSNAQAGLSTYVSAPGIVQQIS---GLRADLTALQSDLENSLPGDRNRCINEL 517
           +  +L   +  +    T+ +   + +++     L  D  A+ +   +     RN+ ++ L
Sbjct: 451 LYQVLEGENKKKELFLTHGNLEEVAEKLKQNISLVQDQLAVSAQEHSFFLSKRNKDVDML 510

Query: 518 C-TLIQSLQQLLFA 530
           C TL Q   QLL +
Sbjct: 511 CDTLYQGGNQLLLS 524




Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.
Homo sapiens (taxid: 9606)
>sp|Q6DCY9|HAUS3_XENLA HAUS augmin-like complex subunit 3 OS=Xenopus laevis GN=haus3 PE=2 SV=1 Back     alignment and function description
>sp|Q8QZX2|HAUS3_MOUSE HAUS augmin-like complex subunit 3 OS=Mus musculus GN=Haus3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
255572632616 conserved hypothetical protein [Ricinus 0.998 1.0 0.865 0.0
449465240615 PREDICTED: HAUS augmin-like complex subu 0.995 0.998 0.861 0.0
356563368618 PREDICTED: HAUS augmin-like complex subu 0.998 0.996 0.812 0.0
79531960617 uncharacterized protein [Arabidopsis tha 0.996 0.996 0.792 0.0
224129494661 predicted protein [Populus trichocarpa] 0.987 0.921 0.771 0.0
297792035617 hypothetical protein ARALYDRAFT_494914 [ 0.996 0.996 0.789 0.0
8777382671 unnamed protein product [Arabidopsis tha 0.998 0.918 0.713 0.0
413943938617 hypothetical protein ZEAMMB73_378778 [Ze 0.996 0.996 0.693 0.0
218197720617 hypothetical protein OsI_21951 [Oryza sa 0.996 0.996 0.688 0.0
357124996617 PREDICTED: HAUS augmin-like complex subu 0.996 0.996 0.688 0.0
>gi|255572632|ref|XP_002527249.1| conserved hypothetical protein [Ricinus communis] gi|223533342|gb|EEF35093.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1099 bits (2843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/617 (86%), Positives = 573/617 (92%), Gaps = 1/617 (0%)

Query: 1   MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQF 60
           MSGARLCALL E+GY GA++LD DSFEWPFQYDDARPILDWICSSLRPSNVLSL+ELSQ 
Sbjct: 1   MSGARLCALLGEIGYEGANTLDADSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSQC 60

Query: 61  EQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAQLQ 120
           EQFLQE KLLEGEDL+ A+DSISAFSS RD+QEAVFG+EEGLK+IR+AT AYR EA +LQ
Sbjct: 61  EQFLQEGKLLEGEDLDFAYDSISAFSSSRDNQEAVFGAEEGLKEIRDATVAYRAEALELQ 120

Query: 121 RQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIA 180
           RQLRHL  QFDMLTA AS L+QGRRARVAATSTVNG+L+ +DD LSARNL+MN+VLGRI 
Sbjct: 121 RQLRHLLSQFDMLTAQASALIQGRRARVAATSTVNGYLTAIDDSLSARNLRMNEVLGRIV 180

Query: 181 STAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKS 240
           STA+ELAHYHSGDEDG+YLAYSDFHPYLLGDSS  +E+NQWFSKQLD+      AEEGKS
Sbjct: 181 STAEELAHYHSGDEDGLYLAYSDFHPYLLGDSSCTREINQWFSKQLDTTQ-DXXAEEGKS 239

Query: 241 KCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMT 300
           KCSWVSL D SNILVRADLEKSHHQRVSELQRLRS+FGTSERQWVEAQV NAKQQAILMT
Sbjct: 240 KCSWVSLDDISNILVRADLEKSHHQRVSELQRLRSIFGTSERQWVEAQVGNAKQQAILMT 299

Query: 301 LKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYI 360
           LKSQ+ SDEA+IHLD H+L+RKH ELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYI
Sbjct: 300 LKSQITSDEAHIHLDLHTLRRKHSELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYI 359

Query: 361 LQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESE 420
           LQGDYDLKVMRQE YI+RQKA+INHLINQLARHQFL++AC LEK+NML A+SLLKVIESE
Sbjct: 360 LQGDYDLKVMRQEYYINRQKAYINHLINQLARHQFLKIACQLEKKNMLGAFSLLKVIESE 419

Query: 421 LQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVS 480
           LQGYLSATK RVGRCLAL +AASD+QEQGAVDDRD  LHGVRDLLSIHSNAQAGLSTYVS
Sbjct: 420 LQGYLSATKGRVGRCLALTQAASDIQEQGAVDDRDNLLHGVRDLLSIHSNAQAGLSTYVS 479

Query: 481 APGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILT 540
           APGIVQQIS L +DL  LQSDLENSLP DRN+CINELCTLIQSLQQLLFASSTTAQPILT
Sbjct: 480 APGIVQQISALHSDLMTLQSDLENSLPEDRNKCINELCTLIQSLQQLLFASSTTAQPILT 539

Query: 541 PRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERL 600
           PRPLMKELDEMEKINAKLS AVEEVTLEHCKKNEI+KHH+QEVGLQRRVFVDFFCNPERL
Sbjct: 540 PRPLMKELDEMEKINAKLSAAVEEVTLEHCKKNEIVKHHAQEVGLQRRVFVDFFCNPERL 599

Query: 601 RSQVRELTARVRALQVS 617
           RSQVRELTARVRALQVS
Sbjct: 600 RSQVRELTARVRALQVS 616




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465240|ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356563368|ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|79531960|ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] gi|110737416|dbj|BAF00652.1| hypothetical protein [Arabidopsis thaliana] gi|332008298|gb|AED95681.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224129494|ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297792035|ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|8777382|dbj|BAA96972.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|413943938|gb|AFW76587.1| hypothetical protein ZEAMMB73_378778 [Zea mays] Back     alignment and taxonomy information
>gi|218197720|gb|EEC80147.1| hypothetical protein OsI_21951 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|357124996|ref|XP_003564182.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
TAIR|locus:2166071617 AUG3 "AT5G48520" [Arabidopsis 0.996 0.996 0.755 2.5e-248
UNIPROTKB|Q6DCY9597 haus3 "HAUS augmin-like comple 0.698 0.721 0.229 6.4e-22
UNIPROTKB|Q68CZ6603 HAUS3 "HAUS augmin-like comple 0.753 0.771 0.195 1.8e-18
UNIPROTKB|F1NCU4610 HAUS3 "Uncharacterized protein 0.949 0.960 0.195 2.2e-18
UNIPROTKB|F1PDJ8603 HAUS3 "Uncharacterized protein 0.748 0.766 0.200 6e-17
UNIPROTKB|B4DF64489 HAUS3 "cDNA FLJ52073" [Homo sa 0.525 0.662 0.196 1.1e-14
UNIPROTKB|F1MNN1601 HAUS3 "Uncharacterized protein 0.935 0.960 0.181 5.4e-14
UNIPROTKB|I3LEU5555 HAUS3 "Uncharacterized protein 0.633 0.704 0.189 7.4e-14
RGD|1591723533 Haus3 "HAUS augmin-like comple 0.761 0.881 0.199 5.4e-13
MGI|MGI:2387633570 Haus3 "HAUS augmin-like comple 0.481 0.521 0.192 6.6e-12
TAIR|locus:2166071 AUG3 "AT5G48520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2392 (847.1 bits), Expect = 2.5e-248, P = 2.5e-248
 Identities = 466/617 (75%), Positives = 526/617 (85%)

Query:     1 MSGARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVXXXXXXXXX 60
             MS ARLC+L+ ELGY GA  LDPDSFEWPFQYDDARPILDWICSSLRPSNV         
Sbjct:     1 MSSARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLY 60

Query:    61 XXXXXXXXXXXXXDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIREATQAYRDEAAXXX 120
                          DL+ A+DSISAFSSRR++QEAVFG+EE +K++R+AT A++ EA    
Sbjct:    61 EQFQRDGKLLEGDDLDQAYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQ 120

Query:   121 XXXXXXXXXFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIA 180
                      +D+LT  +S L+QGRRARVAATS V+G ++ ++D LSARNLQMN VLGR+A
Sbjct:   121 RQLRRLQTQYDLLTGQSSALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLA 180

Query:   181 STAQELAHYHSGDEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKS 240
             ST+QELAHYHSG+EDGIYLAYSDFH YL GDS+  KELNQWF+KQLD+GP+RLVAEEGKS
Sbjct:   181 STSQELAHYHSGEEDGIYLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEGKS 240

Query:   241 KCSWVSLGDESNILVRADLEKSHHQRVSELQRLRSVFGTSERQWVEAQVENAKQQAILMT 300
             KCSWVSL D SN+L   DLEKS HQRV+ELQRLRS+FGTSERQW+EAQVENAKQQAIL+T
Sbjct:   241 KCSWVSLDDTSNML--RDLEKSQHQRVAELQRLRSIFGTSERQWIEAQVENAKQQAILLT 298

Query:   301 LKSQVASDEAYIHLDFHSLKRKHVELVGELSNLHHKEEKLLSETIPDLCWELAQLQDTYI 360
             LKSQV S EA+IH D HSL+RKH +LV E+S L+ KEEKLLSETIP+LCWELAQLQDTYI
Sbjct:   299 LKSQVTSVEAHIHFDLHSLRRKHADLVEEISTLYQKEEKLLSETIPELCWELAQLQDTYI 358

Query:   361 LQGDYDLKVMRQELYISRQKAFINHLINQLARHQFLRLACHLEKRNMLAAYSLLKVIESE 420
             LQGDYDLKVMRQELYIS+QK FINHL+NQLARHQFL+LAC LEK+NML A+SLLKVIESE
Sbjct:   359 LQGDYDLKVMRQELYISKQKVFINHLVNQLARHQFLKLACQLEKKNMLGAFSLLKVIESE 418

Query:   421 LQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVS 480
             LQGYLSAT+SRVGRC ALI+AASDVQEQGAVDDRD+FLHGVRDLLSIHSN QAGLSTYVS
Sbjct:   419 LQGYLSATRSRVGRCSALIQAASDVQEQGAVDDRDSFLHGVRDLLSIHSNTQAGLSTYVS 478

Query:   481 APGIVQQISGLRADLTALQSDLENSLPGDRNRCINELCTLIQSLQQLLFASSTTAQPILT 540
             AP I+QQI  L++DL++LQSDLENSLP DRNRCINELCT IQ+LQQLLFASSTTAQPILT
Sbjct:   479 APAIIQQIVALQSDLSSLQSDLENSLPDDRNRCINELCTHIQNLQQLLFASSTTAQPILT 538

Query:   541 PRPLMKELDEMEKINAKLSVAVEEVTLEHCKKNEIIKHHSQEVGLQRRVFVDFFCNPERL 600
             P PLMKELDEM KIN+KLS AVEEVTLEH  K EI+KHH+++V LQRRVFVDFFCNPERL
Sbjct:   539 PWPLMKELDEMGKINSKLSTAVEEVTLEHRNKREIVKHHAKDVELQRRVFVDFFCNPERL 598

Query:   601 RSQVRELTARVRALQVS 617
             R+QVREL A VRA Q S
Sbjct:   599 RNQVRELNALVRARQAS 615




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0005819 "spindle" evidence=IDA
GO:0009524 "phragmoplast" evidence=IDA
GO:0080175 "phragmoplast microtubule organization" evidence=IMP
UNIPROTKB|Q6DCY9 haus3 "HAUS augmin-like complex subunit 3" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q68CZ6 HAUS3 "HAUS augmin-like complex subunit 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NCU4 HAUS3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PDJ8 HAUS3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B4DF64 HAUS3 "cDNA FLJ52073" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MNN1 HAUS3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LEU5 HAUS3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1591723 Haus3 "HAUS augmin-like complex, subunit 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2387633 Haus3 "HAUS augmin-like complex, subunit 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 617
PF14932256 HAUS-augmin3: HAUS augmin-like complex subunit 3 100.0
PRK11637428 AmiB activator; Provisional 93.94
PF00038312 Filament: Intermediate filament protein; InterPro: 90.2
PF14932256 HAUS-augmin3: HAUS augmin-like complex subunit 3 89.39
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 85.71
PRK11637428 AmiB activator; Provisional 84.18
PF12128 1201 DUF3584: Protein of unknown function (DUF3584); In 81.15
>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3 Back     alignment and domain information
Probab=100.00  E-value=4.8e-56  Score=454.34  Aligned_cols=250  Identities=31%  Similarity=0.418  Sum_probs=225.3

Q ss_pred             ccCCCCCchhHHHHHhccCCCCCCCCHHHHhHHHHHHhcccCCChhhHHHHHhhcccccCCCCchhhhccchhhhhHHHH
Q 007126           28 WPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEKLLEGEDLESAFDSISAFSSRRDDQEAVFGSEEGLKDIRE  107 (617)
Q Consensus        28 Wlf~~~e~~~FL~Wfc~nV~~~NVLS~~EL~~f~~L~~sGkiLeg~~Ld~aL~~i~~~~~~~~~~ed~~~~ee~lE~l~~  107 (617)
                      |||++|+++|||+|||+||+++||||++|+++|++|+++||||+|+|||+||++|++++.+..++++            .
T Consensus         1 Wlf~~~e~~~FL~W~c~~V~~~NvLS~~El~~~~~L~~~GkiLeg~~Ld~aL~~~~~~~~~~~~~~e------------~   68 (256)
T PF14932_consen    1 WLFDDEEFESFLDWFCSNVNESNVLSEEELQAFEELQKSGKILEGEALDEALKTISAFSPKLLELEE------------E   68 (256)
T ss_pred             CCCCCccHHHHHHHHHccCChhccCCHHHHHHHHHHHHcCCcCCHHHHHHHHHHcccccCCccccch------------H
Confidence            9999999999999999999999999999999999999999999999999999999986666555543            4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhhhhhhhhhhhhhhhhhHHhHHhHHHHHHHHHHHHHHh
Q 007126          108 ATQAYRDEAAQLQRQLRHLQCQFDMLTAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELA  187 (617)
Q Consensus       108 ~~e~Le~e~~~lqk~~~~l~~~~n~L~~~as~l~~~~~~l~~~~~~~~~~L~~~~~~L~~~n~k~n~~L~~l~~~v~~L~  187 (617)
                      ++++|+++++.++++++..++++|+|+.+++.+.+....+....+++++.+++....+.+.+.++|++++.+++.|.+++
T Consensus        69 ~le~Le~el~~l~~~~~~~~~~~~~lq~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~k~~~~l~~l~~~v~~l~  148 (256)
T PF14932_consen   69 DLEALEEELEALQEYKELYEQLRNKLQQLDSSLSQELSELEGKEEEAQKKLKKAQKELSAECSKLNNELNQLLGEVSKLA  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68888999999999999999999999999999999999888888999999999988888877777777777777777665


Q ss_pred             hh----ccC--CCCcccccccCChhhhhhcchhHHHHHHHHHhhccCCcccccccccCccccccccCCccccccccchhh
Q 007126          188 HY----HSG--DEDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDSGPFRLVAEEGKSKCSWVSLGDESNILVRADLEK  261 (617)
Q Consensus       188 ~~----~s~--~~~gvflsq~~le~Yl~qee~~t~~Lt~y~kKqF~~G~~~lv~~e~~s~~~~~qL~D~~~~l~~~~~e~  261 (617)
                      .+    +++  ++||+|||||||++|+++|++||+|||+|||||||+|++++|  |+++.++|+ +.|+++|.++|+.++
T Consensus       149 ~~~~~~~~~~~~~~~~flsq~~l~~Y~~~ee~~t~~L~~y~kKqF~~g~~~~~--e~s~~~~~~-lld~~~~~~~~d~~e  225 (256)
T PF14932_consen  149 SELAHAHSGQQQNPPVFLSQMPLEQYLSQEEQFTKYLTSYTKKQFFQGISELV--ESSNEDNFQ-LLDISNPSIRGDEEE  225 (256)
T ss_pred             HHHHHhcccccCCCCchhhhCCHHHHHHHHHHHHHHHHHHHHHhcccccchhh--ccccchhhH-HhhccccccccchHH
Confidence            54    454  678899999999999999999999999999999999999999  676667666 788999999988777


Q ss_pred             hHHhhHHHHHHhHhhHhhhHHHHHHHHHHHH
Q 007126          262 SHHQRVSELQRLRSVFGTSERQWVEAQVENA  292 (617)
Q Consensus       262 ~~e~r~~EL~RLq~~y~~aq~q~I~a~ae~~  292 (617)
                      .+++|+.||+|||++|+||+||||.|+|+++
T Consensus       226 ~~~~~~~EL~rLq~~~~~aq~q~I~~ka~~~  256 (256)
T PF14932_consen  226 VLEERRSELARLQSAYICAQHQLIQAKAEVA  256 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8888888999999999999999999999863



>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>PF14932 HAUS-augmin3: HAUS augmin-like complex subunit 3 Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.7 bits (154), Expect = 1e-10
 Identities = 75/578 (12%), Positives = 160/578 (27%), Gaps = 149/578 (25%)

Query: 5   RLCALLCELGYGGA-----DSLDPDSFEW---PFQYDDARPILDWIC------------S 44
           RL   L             + L  + +++   P + +  +P +                 
Sbjct: 66  RLFWTLLSKQEEMVQKFVEEVLRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 45  SLRPSNVLSLSELSQFEQFLQEEK-----LLEG----------------EDLESAFDS-- 81
                NV  L    +  Q L E +     L++G                  ++   D   
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 82  --ISAFSSRRDD------QEAVFGSEEGLKDIREATQAYRDEAAQLQRQLRHLQCQFDML 133
             ++  +    +      Q+ ++  +       + +   +     +Q +LR L       
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS---- 240

Query: 134 TAHASTLMQGRRARVAATSTVNGHLSILDDGLSARNLQMNDVLGRIASTAQELAHYHSGD 193
                                   L +L +  +A+     ++  +I  T +         
Sbjct: 241 -------KPYENC-----------LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282

Query: 194 EDGIYLAYSDFHPYLLGDSSSMKELNQWFSKQLDS--------GPFR--LVAEEGKS-KC 242
                    D H   L        L ++   +            P R  ++AE  +    
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 243 SW----VSLGDESNILVRADLEKSHHQRVSELQRL---RSVF--------GTSERQWVEA 287
           +W        D+   ++ + L        +E +++    SVF              W + 
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLN---VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399

Query: 288 QVENAKQQAILMTLKSQVASDEAYIHLDFHSLKRKHVELVGELSNL--HHKEEKLLSETI 345
              +       +   S V        +   S+   ++EL  +L N    H+   ++    
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELKVKLENEYALHR--SIVDHYN 454

Query: 346 PDLCWELAQL----QDTYILQ--GDYDLKVMRQ-ELYISRQKAFIN-HLINQLARHQFLR 397
               ++   L     D Y     G + LK +   E     +  F++   + Q  RH    
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIG-HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513

Query: 398 LACHLEKRNMLAAYSLLKVIESELQGYLSATKSRVGRCLALIEAASDVQEQGAVDDRDTF 457
                   N L           +L+ Y    K  +          +D + +  V+    F
Sbjct: 514 WNASGSILNTL----------QQLKFY----KPYICD--------NDPKYERLVNAILDF 551

Query: 458 LHGVRDLL--SIHSN-AQAGLST-----YVSAPGIVQQ 487
           L  + + L  S +++  +  L       +  A   VQ+
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00