Citrus Sinensis ID: 007210

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--

MDFVGALTQKPKLLFLRFLVLSLISLLSSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV

cccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEccccHHHHHHccccccccEEEEccccccccccHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHcccccccccHHHHHHHccccccccccccccHHHHHHHHHcccccccccccccccEEEEEEEEccccccccHHcccccccccccEEEEccEEEEEEEEccccccEEEEEEEEEccccEEEEEEccccccEEEEcccccHHHHHHHHcccccHHHHHHcccccccccccccccccccccccEEEEcccccccHHHHHHcHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccccc

cccEHHccccHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccEcEEEEccccccccccHHHHHEEEHHHcccEEEEEEEEEcccccHHHHHHHHcccccEEEEcccEcHHHcHHHHEHHHHcccccccccccccccEEcccccEEEEEcEccHHHHccccEEcEccccccccccccHHHHHHHHHHHHHHHcEcccccHHHHHHHHHHHHcccccEEEEccEcccEEEEcEEcEccccEEccHHHHHHHcccccEEEEEccEEEEEEEcccccccEEEEEEEEEcccccEEEEEEEEEEEEEEEccHHHHHHHHHHHccEEcHHHHHHccccccEEcccccEEEEccEEEEEEEccccccccccccEEEEcHHHHHHHccccccccccccccccccccHHcccEEEcccccccccHEEEEcccccccccccccEEEEEEccccccccEEEEEEcccccccccEcccccccHHHHHHHHHHHHHHHHHHHccccHHccccccccHHHHHHcEEcccccccccccccHHHHHHHHHHHcEEccccEEcccEcccEccccEEcccEcEEEccHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHccc

mdfvgaltqkpkLLFLRFLVLSLISLLSSSqaaasgagaknnlykyrypfikeassftsppppssssfsprngdhhhhsaFDYIVvgggtagcplaATLSQNFTVLLLErggvpfsdvnVSFLQNFHmtladtspqsasqyFISTDGVLNARARVlgggssinagfytRASSQFIERMGwdaklvnesfpwverqivhqpkqeGWQKALRDSLldvgvspfngftydhiygtkiggtifdrfgRRHTAAELLASANPQKITVLIRATVQKIVfdtsgkrpkavgvifkdengnqhqaflagnpksevilscgaigtpqmlklsgvgpkaeleKLNISVVldnahigkgmadnpmnavfvpsnrpveqsLIETVGITKLGVYIEassgfgesrdsihchhgimsaeigqlstippkqrtpEAIQDYIRnkrtlpheafkggfilekiaspistgelslintnvddnpsvsfnyfshpldlkrcVDGVRMAAKIVQSkhflnytqCDQKSVEAILNASVRANvnlvpkhtndtksLEQFCKDTVITIWHyhggchvgkvVSTEYKvlgidrlrvvdgstydespgtnpqgtvLMMGRYMGVKILRQRLGKAAGV

MDFVGALTQKPKLLFLRFLVLSLISLLSSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELlasanpqkiTVLIRATVQKivfdtsgkrpKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEigqlstippkQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVpkhtndtkslEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRvvdgstydespgtnpqgtvlMMGRYMGVKILRQrlgkaagv

MDFVGALTQKPKllflrflvlslisllsssqaaasgagaKNNLYKYRYPFIKEAssftsppppssssfspRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV

****GALTQKPKLLFLRFLVLSLISLLSS*******AGAKNNLYKYRYPFIK****************************FDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQL************IQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTY*********GTVLMMGRYMGVKILR*********

***V***TQKPKLLFLRFLVLSLISLLSSS************LYKYRYPFIKEASSFTSPPP*************HHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLG*****

MDFVGALTQKPKLLFLRFLVLSLISLLS*********GAKNNLYKYRYPFIKEA*******************DHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV

iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		612	2.2.26 [Sep-21-2011]
Q9S746		594	Protein HOTHEAD OS=Arabid	yes	no	0.942	0.971	0.704	0.0
Q9SSM2		552	(R)-mandelonitrile lyase-	no	no	0.833	0.923	0.449	1e-127
P52707		573	(R)-mandelonitrile lyase	N/A	no	0.820	0.876	0.383	1e-107
Q945K2		563	(R)-mandelonitrile lyase	N/A	no	0.818	0.889	0.394	1e-106
O50048		576	(R)-mandelonitrile lyase	N/A	no	0.807	0.857	0.395	1e-105
P52706		563	(R)-mandelonitrile lyase	N/A	no	0.807	0.877	0.393	1e-105
O82784		574	(R)-mandelonitrile lyase	N/A	no	0.805	0.858	0.388	1e-104
O24243		559	(R)-mandelonitrile lyase	N/A	no	0.805	0.881	0.384	1e-101
C3MIE4		549	Choline dehydrogenase OS=	yes	no	0.797	0.888	0.255	8e-25
Q7MF12		560	Choline dehydrogenase OS=	no	no	0.774	0.846	0.256	1e-24

>sp\|Q9S746\|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1	Back alignment and function desciption

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/586 (70%), Positives = 480/586 (81%), Gaps = 9/586 (1%)

Query: 28  SSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVG 87
           S S  A+ G   K+    YRY FI +AS+F+S    SSSS    NG     S++DYIV+G
Sbjct: 17  SLSSTASKGKEKKSKFNPYRYTFIDKASTFSS----SSSSSFSSNG---QDSSYDYIVIG 69

Query: 88  GGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDG 147
           GGTAGCPLAATLSQNF+VL+LERGGVPF++ NVSFL+NFH+ LAD S  SASQ F+STDG
Sbjct: 70  GGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSASQAFVSTDG 129

Query: 148 VLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQK 207
           V NARARVLGGGS INAGFY+RA + F++R GWD KLV ES+PWVER+IVHQPK   WQK
Sbjct: 130 VYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVHQPKLTLWQK 189

Query: 208 ALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRAT 267
           ALRDSLL+VGV PFNGFTYDH+ GTKIGGTIFDRFGRRHTAAELLA ANPQK+ VLI AT
Sbjct: 190 ALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYAT 249

Query: 268 VQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGP 327
           VQKIVFDTSG RP+  GVIFKDE GNQHQA L+    SEVILS GAIG+PQML LSG+GP
Sbjct: 250 VQKIVFDTSGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGP 309

Query: 328 KAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSG 387
           K EL++L I VVL+N H+GKGMADNPMN + VPS  P+EQSLI+TVGITK+GVY+EAS+G
Sbjct: 310 KKELQRLKIPVVLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITKMGVYVEASTG 369

Query: 388 FGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYI-RNKRTLPHEAFKGGFILEKI 446
           FG+S +SIH H+GIMS +    STIP KQR PEA Q YI RNK  L HEAF G FILEK+
Sbjct: 370 FGQSPESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQL-HEAFNGSFILEKL 428

Query: 447 ASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQ 506
           A PIS G LSL+NTNVDDNPSV+FNYF HP+DL+RCV+ +R+ +K+V S  FLNYTQCD+
Sbjct: 429 AYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDK 488

Query: 507 KSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLG 566
           ++V  +L+ SV+AN+NL PK  NDTKS+ QFCKDTV+TIWHYHGGC VGKVVS   KVLG
Sbjct: 489 QNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLG 548

Query: 567 IDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV 612
           +DRLRV+DGST+DESPGTNPQ T++MMGRYMGVKILR+RLG  AGV
Sbjct: 549 VDRLRVIDGSTFDESPGTNPQATMMMMGRYMGVKILRERLGNKAGV 594

Probable FAD-dependent enzyme. Involved in regulating post-genital organ fusion. Required to limit cellular interactions between contacting epidermal cells during floral development.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9SSM2\|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050 PE=2 SV=1	Back alignment and function description

>sp\|P52707\|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1	Back alignment and function description

>sp\|Q945K2\|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1	Back alignment and function description

>sp\|O50048\|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1	Back alignment and function description

>sp\|P52706\|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1	Back alignment and function description

>sp\|O82784\|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1	Back alignment and function description

>sp\|O24243\|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1	Back alignment and function description

>sp\|C3MIE4\|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3 SV=1	Back alignment and function description

>sp\|Q7MF12\|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		612
224128496		591	predicted protein [Populus trichocarpa]	0.934	0.967	0.759	0.0
255572947		597	glucose-methanol-choline (gmc) oxidoredu	0.915	0.938	0.783	0.0
224134567		554	predicted protein [Populus trichocarpa]	0.877	0.969	0.771	0.0
449458173		595	PREDICTED: protein HOTHEAD-like [Cucumis	0.916	0.942	0.748	0.0
225442275		584	PREDICTED: protein HOTHEAD-like [Vitis v	0.933	0.977	0.737	0.0
297743084		593	unnamed protein product [Vitis vinifera]	0.924	0.954	0.740	0.0
449448100		588	PREDICTED: protein HOTHEAD-like [Cucumis	0.921	0.959	0.726	0.0
356550436		585	PREDICTED: protein HOTHEAD-like [Glycine	0.898	0.940	0.732	0.0
356526015		591	PREDICTED: protein HOTHEAD-like [Glycine	0.913	0.945	0.743	0.0
356556753		585	PREDICTED: protein HOTHEAD-like [Glycine	0.898	0.940	0.732	0.0

>gi\|224128496\|ref\|XP_002329018.1\| predicted protein [Populus trichocarpa] gi\|222839689\|gb\|EEE78012.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/586 (75%), Positives = 516/586 (88%), Gaps = 14/586 (2%)

Query: 27  LSSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVV 86
           LSSSQA        ++  ++RYPFI++ASSF S    SSS  S   GDH    A+DYIVV
Sbjct: 20  LSSSQAG-------HHYSEFRYPFIRKASSFPSS---SSSFSSSGGGDH----AYDYIVV 65

Query: 87  GGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTD 146
           GGGTAGCPLAATLSQ F+VLLLERGGVPF++ NVSF +NFH+ LADTS  SASQYFISTD
Sbjct: 66  GGGTAGCPLAATLSQRFSVLLLERGGVPFANANVSFSKNFHIALADTSSTSASQYFISTD 125

Query: 147 GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQ 206
           GVLNARARVLGGG+ INAGFYTRAS +FI ++GWDAKLVN+S+PWVE+QIVH+PK   WQ
Sbjct: 126 GVLNARARVLGGGTCINAGFYTRASKRFIHKVGWDAKLVNKSYPWVEKQIVHRPKVAPWQ 185

Query: 207 KALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRA 266
             +RDSLLD+GV+PFNGFTYDHIYGTK GGTIFD+FGRR TAAELLASA+P+K+TVL+ A
Sbjct: 186 VVVRDSLLDLGVAPFNGFTYDHIYGTKFGGTIFDQFGRRQTAAELLASADPRKLTVLVHA 245

Query: 267 TVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326
           TVQK++FD SGKRPKAVGV+FKDENGNQHQAFL+ + +SE+ILSCGAIGTPQML LSG+G
Sbjct: 246 TVQKVLFDISGKRPKAVGVLFKDENGNQHQAFLSNSQRSEIILSCGAIGTPQMLLLSGIG 305

Query: 327 PKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASS 386
           PK ELE+  ISVVL N  +GKGMADNPMNA+FVP  RPV+QSLI+TVGITK+GVYIEASS
Sbjct: 306 PKDELEEKKISVVLHNKFVGKGMADNPMNAIFVPFKRPVQQSLIQTVGITKMGVYIEASS 365

Query: 387 GFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKI 446
           GFG+S+DSI CHHGIMSAEIGQLST+PPKQRTPEAIQ YI+ K+ +PHEAFKGGFILEKI
Sbjct: 366 GFGQSKDSIQCHHGIMSAEIGQLSTLPPKQRTPEAIQAYIKRKKDIPHEAFKGGFILEKI 425

Query: 447 ASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQ 506
           A+PISTG+L LI+TNV+DNPSV+FNYF HP DL+RCVDG+RMA K+VQS+HF N+TQCD+
Sbjct: 426 ANPISTGQLRLISTNVEDNPSVTFNYFKHPRDLQRCVDGIRMATKMVQSEHFRNFTQCDK 485

Query: 507 KSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLG 566
           ++ + ILN SV ANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVV+++YKVLG
Sbjct: 486 QTTDKILNMSVSANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVNSDYKVLG 545

Query: 567 IDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV 612
           ++RLR+VDGS +DESPGTNPQ TV+MMGRYMG+KILR RLGK AGV
Sbjct: 546 VNRLRIVDGSVFDESPGTNPQATVMMMGRYMGLKILRDRLGKGAGV 591

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255572947\|ref\|XP_002527404.1\| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] gi\|223533214\|gb\|EEF34970.1\| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224134567\|ref\|XP_002327436.1\| predicted protein [Populus trichocarpa] gi\|222835990\|gb\|EEE74411.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449458173\|ref\|XP_004146822.1\| PREDICTED: protein HOTHEAD-like [Cucumis sativus] gi\|449515708\|ref\|XP_004164890.1\| PREDICTED: protein HOTHEAD-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225442275\|ref\|XP_002275841.1\| PREDICTED: protein HOTHEAD-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297743084\|emb\|CBI35951.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449448100\|ref\|XP_004141804.1\| PREDICTED: protein HOTHEAD-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356550436\|ref\|XP_003543593.1\| PREDICTED: protein HOTHEAD-like [Glycine max]	Back alignment and taxonomy information

>gi\|356526015\|ref\|XP_003531615.1\| PREDICTED: protein HOTHEAD-like [Glycine max]	Back alignment and taxonomy information

>gi\|356556753\|ref\|XP_003546687.1\| PREDICTED: protein HOTHEAD-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		612
TAIR\|locus:2032627		594	HTH "HOTHEAD" [Arabidopsis tha	0.923	0.951	0.700	5e-218
TAIR\|locus:2034705		572	AT1G12570 [Arabidopsis thalian	0.851	0.910	0.545	5.5e-148
TAIR\|locus:2173068		586	AT5G51950 [Arabidopsis thalian	0.852	0.890	0.529	8.4e-145
TAIR\|locus:2078441		577	AT3G56060 [Arabidopsis thalian	0.851	0.902	0.516	7e-141
TAIR\|locus:2173053		582	AT5G51930 [Arabidopsis thalian	0.834	0.878	0.496	6.4e-131
TAIR\|locus:2032642		552	AT1G73050 [Arabidopsis thalian	0.496	0.550	0.520	3.2e-119
TAIR\|locus:2035830		501	AT1G14190 [Arabidopsis thalian	0.478	0.584	0.453	3.9e-104
TAIR\|locus:505006121		503	AT1G14185 [Arabidopsis thalian	0.566	0.689	0.410	3.9e-104
UNIPROTKB\|Q945K2		563	MDL2 "(R)-mandelonitrile lyase	0.478	0.520	0.448	3.2e-100
FB\|FBgn0030591		865	CG9517 [Drosophila melanogaste	0.607	0.430	0.270	2e-24

TAIR\|locus:2032627 HTH "HOTHEAD" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2106 (746.4 bits), Expect = 5.0e-218, P = 5.0e-218
 Identities = 402/574 (70%), Positives = 466/574 (81%)

Query:    40 KNNLYKYRYPFIKEAXXXXXXXXXXXXXXXXRNGDHHHHSAFDYIVVGGGTAGCPLAATL 99
             K+    YRY FI +A                 NG     S++DYIV+GGGTAGCPLAATL
Sbjct:    29 KSKFNPYRYTFIDKASTFSSSSSSSFSS----NGQD---SSYDYIVIGGGTAGCPLAATL 81

Query:   100 SQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGG 159
             SQNF+VL+LERGGVPF++ NVSFL+NFH+ LAD S  SASQ F+STDGV NARARVLGGG
Sbjct:    82 SQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSASQAFVSTDGVYNARARVLGGG 141

Query:   160 SSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVS 219
             S INAGFY+RA + F++R GWD KLV ES+PWVER+IVHQPK   WQKALRDSLL+VGV 
Sbjct:   142 SCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVHQPKLTLWQKALRDSLLEVGVR 201

Query:   220 PFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKR 279
             PFNGFTYDH+ GTKIGGTIFDRFGRRHTAAELLA ANPQK+ VLI ATVQKIVFDTSG R
Sbjct:   202 PFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYATVQKIVFDTSGTR 261

Query:   280 PKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVV 339
             P+  GVIFKDE GNQHQA L+    SEVILS GAIG+PQML LSG+GPK EL++L I VV
Sbjct:   262 PRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVV 321

Query:   340 LDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHH 399
             L+N H+GKGMADNPMN + VPS  P+EQSLI+TVGITK+GVY+EAS+GFG+S +SIH H+
Sbjct:   322 LENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITKMGVYVEASTGFGQSPESIHTHY 381

Query:   400 GIMSAEIGQLSTIPPKQRTPEAIQDYI-RNKRTLPHEAFKGGFILEKIASPISTGELSLI 458
             GIMS +    STIP KQR PEA Q YI RNK  L HEAF G FILEK+A PIS G LSL+
Sbjct:   382 GIMSNKNELFSTIPAKQRRPEATQAYITRNKYQL-HEAFNGSFILEKLAYPISRGHLSLV 440

Query:   459 NTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVR 518
             NTNVDDNPSV+FNYF HP+DL+RCV+ +R+ +K+V S  FLNYTQCD+++V  +L+ SV+
Sbjct:   441 NTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSLSVK 500

Query:   519 ANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTY 578
             AN+NL PK  NDTKS+ QFCKDTV+TIWHYHGGC VGKVVS   KVLG+DRLRV+DGST+
Sbjct:   501 ANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTF 560

Query:   579 DESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV 612
             DESPGTNPQ T++MMGRYMGVKILR+RLG  AGV
Sbjct:   561 DESPGTNPQATMMMMGRYMGVKILRERLGNKAGV 594

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0006066 "alcohol metabolic process" evidence=IEA

GO:0008812 "choline dehydrogenase activity" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA

GO:0016832 "aldehyde-lyase activity" evidence=ISS

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IMP

GO:0046593 "mandelonitrile lyase activity" evidence=ISS

GO:0009553 "embryo sac development" evidence=IMP

GO:0010430 "fatty acid omega-oxidation" evidence=IMP

TAIR\|locus:2034705 AT1G12570 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2173068 AT5G51950 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078441 AT3G56060 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2173053 AT5G51930 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2032642 AT1G73050 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2035830 AT1G14190 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:505006121 AT1G14185 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q945K2 MDL2 "(R)-mandelonitrile lyase 2" [Prunus dulcis (taxid:3755)]	Back alignment and assigned GO terms

FB\|FBgn0030591 CG9517 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S746	HTH_ARATH	No assigned EC number	0.7047	0.9428	0.9713	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		612
PLN02785		587	PLN02785, PLN02785, Protein HOTHEAD	0.0
COG2303		542	COG2303, BetA, Choline dehydrogenase and related f	1e-40
TIGR01810		532	TIGR01810, betA, choline dehydrogenase	4e-31
pfam05199		139	pfam05199, GMC_oxred_C, GMC oxidoreductase	1e-23
TIGR03970		487	TIGR03970, Rv0697, dehydrogenase, Rv0697 family	1e-22
pfam00732		218	pfam00732, GMC_oxred_N, GMC oxidoreductase	5e-17
PRK02106		560	PRK02106, PRK02106, choline dehydrogenase; Validat	7e-17
PRK02106		560	PRK02106, PRK02106, choline dehydrogenase; Validat	3e-11
PRK02106		560	PRK02106, PRK02106, choline dehydrogenase; Validat	2e-08
COG0644		396	COG0644, FixC, Dehydrogenases (flavoproteins) [Ene	3e-04
PTZ00367		567	PTZ00367, PTZ00367, squalene epoxidase; Provisiona	0.003
PTZ00383		497	PTZ00383, PTZ00383, malate:quinone oxidoreductase;	0.004
pfam00890		401	pfam00890, FAD_binding_2, FAD binding domain	0.004

>gnl\|CDD\|215420 PLN02785, PLN02785, Protein HOTHEAD	Back alignment and domain information

 Score = 1098 bits (2842), Expect = 0.0
 Identities = 451/595 (75%), Positives = 510/595 (85%), Gaps = 13/595 (2%)

Query: 18  FLVLSLISLLSSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHH 77
           FL L L+ L +SS +       K++   YRYPFI +ASSF      SSSS S  +G    
Sbjct: 6   FLFLLLLCLPTSSSSQG-----KSHFTPYRYPFIDKASSF-----SSSSSSSSSSGGDS- 54

Query: 78  HSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQS 137
             A+DYIVVGGGTAGCPLAATLSQNF+VLLLERGGVPF + NVSFL+NFH+ LADTSP S
Sbjct: 55  --AYDYIVVGGGTAGCPLAATLSQNFSVLLLERGGVPFGNANVSFLENFHIGLADTSPTS 112

Query: 138 ASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIV 197
           ASQ FISTDGV+NARARVLGGG+ INAGFY+RAS++FI++ GWDAKLVNES+PWVERQIV
Sbjct: 113 ASQAFISTDGVINARARVLGGGTCINAGFYSRASTRFIQKAGWDAKLVNESYPWVERQIV 172

Query: 198 HQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANP 257
           H PK   WQ ALRDSLL+VGVSPFNGFTYDH+YGTK+GGTIFD FGRRHTAAELLA+ NP
Sbjct: 173 HWPKVAPWQAALRDSLLEVGVSPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNP 232

Query: 258 QKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTP 317
            K+ VL+ ATVQKIVFDTSGKRP+A GVIFKDENGNQHQAFL+ N  SE+ILS GAIG+P
Sbjct: 233 NKLRVLLHATVQKIVFDTSGKRPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSP 292

Query: 318 QMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITK 377
           QML LSG+GPK EL+K  I VVL N H+GKGMADNPMN++FVPS  PVEQSLI+TVGITK
Sbjct: 293 QMLLLSGIGPKKELKKHKIPVVLHNEHVGKGMADNPMNSIFVPSKAPVEQSLIQTVGITK 352

Query: 378 LGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAF 437
           +GVYIEASSGFG+S DSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQ YI  K+ LPHEAF
Sbjct: 353 MGVYIEASSGFGQSPDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQAYIHRKKNLPHEAF 412

Query: 438 KGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKH 497
            GGFILEKIA PISTG LSLINTNVDDNPSV+FNYF HP DL+RCV G+R   KIV++ H
Sbjct: 413 NGGFILEKIAGPISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNH 472

Query: 498 FLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKV 557
           F N+TQCD++++E +LN SV+AN+NL+PKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKV
Sbjct: 473 FTNFTQCDKQTMEKVLNMSVKANINLIPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKV 532

Query: 558 VSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV 612
           V   YKVLG+ RLRV+DGST+DESPGTNPQ TV+MMGRYMGVKILR+RLG+AAGV
Sbjct: 533 VDQNYKVLGVSRLRVIDGSTFDESPGTNPQATVMMMGRYMGVKILRERLGRAAGV 587

Length = 587

>gnl\|CDD\|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|233581 TIGR01810, betA, choline dehydrogenase	Back alignment and domain information

>gnl\|CDD\|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase	Back alignment and domain information

>gnl\|CDD\|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family	Back alignment and domain information

>gnl\|CDD\|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase	Back alignment and domain information

>gnl\|CDD\|235000 PRK02106, PRK02106, choline dehydrogenase; Validated	Back alignment and domain information

>gnl\|CDD\|235000 PRK02106, PRK02106, choline dehydrogenase; Validated	Back alignment and domain information

>gnl\|CDD\|235000 PRK02106, PRK02106, choline dehydrogenase; Validated	Back alignment and domain information

>gnl\|CDD\|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|240384 PTZ00367, PTZ00367, squalene epoxidase; Provisional	Back alignment and domain information

>gnl\|CDD\|240393 PTZ00383, PTZ00383, malate:quinone oxidoreductase; Provisional	Back alignment and domain information

>gnl\|CDD\|216176 pfam00890, FAD_binding_2, FAD binding domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		612
PLN02785		587	Protein HOTHEAD	100.0
KOG1238		623	consensus Glucose dehydrogenase/choline dehydrogen	100.0
PRK02106		560	choline dehydrogenase; Validated	100.0
TIGR01810		532	betA choline dehydrogenase. This enzyme is a membe	100.0
COG2303		542	BetA Choline dehydrogenase and related flavoprotei	100.0
TIGR02462		544	pyranose_ox pyranose oxidase. Pyranose oxidase (al	100.0
PF00732		296	GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001	100.0
PF05199		144	GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078	99.98
PRK06481		506	fumarate reductase flavoprotein subunit; Validated	99.79
PRK12845		564	3-ketosteroid-delta-1-dehydrogenase; Reviewed	99.7
PRK07121		492	hypothetical protein; Validated	99.68
PRK12835		584	3-ketosteroid-delta-1-dehydrogenase; Reviewed	99.67
PRK12844		557	3-ketosteroid-delta-1-dehydrogenase; Reviewed	99.63
PRK12834		549	putative FAD-binding dehydrogenase; Reviewed	99.63
PRK12837		513	3-ketosteroid-delta-1-dehydrogenase; Provisional	99.62
PF00890		417	FAD_binding_2: FAD binding domain of the Pfam fami	99.59
PRK08274		466	tricarballylate dehydrogenase; Validated	99.59
PTZ00306		1167	NADH-dependent fumarate reductase; Provisional	99.58
PRK12839		572	hypothetical protein; Provisional	99.58
PRK07573		640	sdhA succinate dehydrogenase flavoprotein subunit;	99.57
TIGR01813		439	flavo_cyto_c flavocytochrome c. This model describ	99.55
PRK07843		557	3-ketosteroid-delta-1-dehydrogenase; Reviewed	99.55
PRK12843		578	putative FAD-binding dehydrogenase; Reviewed	99.54
PRK06175		433	L-aspartate oxidase; Provisional	99.54
PLN00128		635	Succinate dehydrogenase [ubiquinone] flavoprotein	99.53
PRK06452		566	sdhA succinate dehydrogenase flavoprotein subunit;	99.53
PRK12842		574	putative succinate dehydrogenase; Reviewed	99.51
PRK06263		543	sdhA succinate dehydrogenase flavoprotein subunit;	99.51
PLN02815		594	L-aspartate oxidase	99.51
PRK09078		598	sdhA succinate dehydrogenase flavoprotein subunit;	99.5
PTZ00139		617	Succinate dehydrogenase [ubiquinone] flavoprotein	99.5
PRK08958		588	sdhA succinate dehydrogenase flavoprotein subunit;	99.49
PRK07395		553	L-aspartate oxidase; Provisional	99.49
PRK06134		581	putative FAD-binding dehydrogenase; Reviewed	99.47
PRK09077		536	L-aspartate oxidase; Provisional	99.46
PRK09231		582	fumarate reductase flavoprotein subunit; Validated	99.45
PRK08641		589	sdhA succinate dehydrogenase flavoprotein subunit;	99.44
PRK07804		541	L-aspartate oxidase; Provisional	99.44
PRK07057		591	sdhA succinate dehydrogenase flavoprotein subunit;	99.44
PRK08626		657	fumarate reductase flavoprotein subunit; Provision	99.43
PRK08071		510	L-aspartate oxidase; Provisional	99.42
TIGR01176		580	fum_red_Fp fumarate reductase, flavoprotein subuni	99.41
PRK05945		575	sdhA succinate dehydrogenase flavoprotein subunit;	99.41
PRK06069		577	sdhA succinate dehydrogenase flavoprotein subunit;	99.4
PRK07803		626	sdhA succinate dehydrogenase flavoprotein subunit;	99.4
TIGR00551		488	nadB L-aspartate oxidase. L-aspartate oxidase is t	99.38
PRK08205		583	sdhA succinate dehydrogenase flavoprotein subunit;	99.37
TIGR01812		566	sdhA_frdA_Gneg succinate dehydrogenase or fumarate	99.36
TIGR01811		603	sdhA_Bsu succinate dehydrogenase or fumarate reduc	99.34
COG2081		408	Predicted flavoproteins [General function predicti	99.33
PRK07512		513	L-aspartate oxidase; Provisional	99.32
PRK08275		554	putative oxidoreductase; Provisional	99.32
TIGR02061		614	aprA adenosine phosphosulphate reductase, alpha su	99.3
PF03486		409	HI0933_like: HI0933-like protein; InterPro: IPR004	99.29
PRK06854		608	adenylylsulfate reductase subunit alpha; Validated	99.28
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	99.24
COG1053		562	SdhA Succinate dehydrogenase/fumarate reductase, f	99.19
TIGR02485		432	CobZ_N-term precorrin 3B synthase CobZ. CobZ is es	99.17
PRK04176		257	ribulose-1,5-biphosphate synthetase; Provisional	99.16
PF01946		230	Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.	99.14
PRK11101		546	glpA sn-glycerol-3-phosphate dehydrogenase subunit	99.12
COG1635		262	THI4 Ribulose 1,5-bisphosphate synthetase, convert	99.12
PLN02661		357	Putative thiazole synthesis	99.1
TIGR00292		254	thiazole biosynthesis enzyme. This enzyme is invol	99.1
PRK08401		466	L-aspartate oxidase; Provisional	99.08
COG0029		518	NadB Aspartate oxidase [Coenzyme metabolism]	99.04
PF01266		358	DAO: FAD dependent oxidoreductase; InterPro: IPR00	99.02
KOG2404		477	consensus Fumarate reductase, flavoprotein subunit	99.01
COG3573		552	Predicted oxidoreductase [General function predict	99.01
COG0579		429	Predicted dehydrogenase [General function predicti	98.98
PLN02464		627	glycerol-3-phosphate dehydrogenase	98.97
PF12831		428	FAD_oxidored: FAD dependent oxidoreductase; PDB: 3	98.96
PRK12266		508	glpD glycerol-3-phosphate dehydrogenase; Reviewed	98.92
TIGR01320		483	mal_quin_oxido malate:quinone-oxidoreductase. This	98.9
TIGR01373		407	soxB sarcosine oxidase, beta subunit family, heter	98.86
PTZ00383		497	malate:quinone oxidoreductase; Provisional	98.85
PRK13369		502	glycerol-3-phosphate dehydrogenase; Provisional	98.82
PRK13977		576	myosin-cross-reactive antigen; Provisional	98.82
COG0644		396	FixC Dehydrogenases (flavoproteins) [Energy produc	98.8
PRK05257		494	malate:quinone oxidoreductase; Validated	98.79
PRK10157		428	putative oxidoreductase FixC; Provisional	98.79
PTZ00363		443	rab-GDP dissociation inhibitor; Provisional	98.78
TIGR03329		460	Phn_aa_oxid putative aminophosphonate oxidoreducta	98.76
KOG2415		621	consensus Electron transfer flavoprotein ubiquinon	98.75
PRK05192		618	tRNA uridine 5-carboxymethylaminomethyl modificati	98.75
TIGR01377		380	soxA_mon sarcosine oxidase, monomeric form. Sarcos	98.74
PRK11259		376	solA N-methyltryptophan oxidase; Provisional	98.73
PRK05675		570	sdhA succinate dehydrogenase flavoprotein subunit;	98.72
PRK12409		410	D-amino acid dehydrogenase small subunit; Provisio	98.72
PRK10015		429	oxidoreductase; Provisional	98.71
PRK13339		497	malate:quinone oxidoreductase; Reviewed	98.7
TIGR02730		493	carot_isom carotene isomerase. Members of this fam	98.66
COG0578		532	GlpA Glycerol-3-phosphate dehydrogenase [Energy pr	98.62
PRK00711		416	D-amino acid dehydrogenase small subunit; Validate	98.62
TIGR00275		400	flavoprotein, HI0933 family. The model when search	98.6
PRK11728		393	hydroxyglutarate oxidase; Provisional	98.59
TIGR03364		365	HpnW_proposed FAD dependent oxidoreductase TIGR033	98.56
KOG1298		509	consensus Squalene monooxygenase [Lipid transport	98.55
PRK06185		407	hypothetical protein; Provisional	98.55
COG1233		487	Phytoene dehydrogenase and related proteins [Secon	98.54
KOG0042		680	consensus Glycerol-3-phosphate dehydrogenase [Ener	98.51
PF01134		392	GIDA: Glucose inhibited division protein A; InterP	98.5
PF06039		488	Mqo: Malate:quinone oxidoreductase (Mqo); InterPro	98.5
PRK07364		415	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	98.48
PLN02172		461	flavin-containing monooxygenase FMO GS-OX	98.48
PRK07208		479	hypothetical protein; Provisional	98.48
TIGR01816		565	sdhA_forward succinate dehydrogenase, flavoprotein	98.45
PF13738		203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	98.45
PLN02985		514	squalene monooxygenase	98.43
PRK01747		662	mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans	98.4
PRK08773		392	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	98.36
COG3380		331	Predicted NAD/FAD-dependent oxidoreductase [Genera	98.35
TIGR02023		388	BchP-ChlP geranylgeranyl reductase. This model rep	98.33
TIGR00136		617	gidA glucose-inhibited division protein A. GidA, t	98.32
PRK08244		493	hypothetical protein; Provisional	98.28
PRK06126		545	hypothetical protein; Provisional	98.28
PLN02697		529	lycopene epsilon cyclase	98.27
TIGR02734		502	crtI_fam phytoene desaturase. Phytoene is converte	98.27
COG2072		443	TrkA Predicted flavoprotein involved in K+ transpo	98.27
COG0665		387	DadA Glycine/D-amino acid oxidases (deaminating) [	98.27
PRK06847		375	hypothetical protein; Provisional	98.27
PRK07333		403	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	98.25
COG0445		621	GidA Flavin-dependent tRNA uridine 5-carboxymethyl	98.25
PRK07608		388	ubiquinone biosynthesis hydroxylase family protein	98.24
COG2509		486	Uncharacterized FAD-dependent dehydrogenases [Gene	98.23
PRK07045		388	putative monooxygenase; Reviewed	98.2
KOG2820		399	consensus FAD-dependent oxidoreductase [General fu	98.19
TIGR01988		385	Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub	98.19
PRK06184		502	hypothetical protein; Provisional	98.19
PRK07190		487	hypothetical protein; Provisional	98.18
PRK06183		538	mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va	98.17
TIGR03378		419	glycerol3P_GlpB glycerol-3-phosphate dehydrogenase	98.16
KOG4254		561	consensus Phytoene desaturase [Coenzyme transport	98.14
TIGR01790		388	carotene-cycl lycopene cyclase family protein. Thi	98.13
PRK08243		392	4-hydroxybenzoate 3-monooxygenase; Validated	98.12
PRK08013		400	oxidoreductase; Provisional	98.12
PRK06834		488	hypothetical protein; Provisional	98.11
PRK11445		351	putative oxidoreductase; Provisional	98.06
PF00743		531	FMO-like: Flavin-binding monooxygenase-like; Inter	98.01
COG0654		387	UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and	98.0
PRK08132		547	FAD-dependent oxidoreductase; Provisional	97.99
TIGR01372		985	soxA sarcosine oxidase, alpha subunit family, hete	97.99
PF13450		68	NAD_binding_8: NAD(P)-binding Rossmann-like domain	97.97
PRK08163		396	salicylate hydroxylase; Provisional	97.97
PRK15317		517	alkyl hydroperoxide reductase subunit F; Provision	97.96
COG0562		374	Glf UDP-galactopyranose mutase [Cell envelope biog	97.94
KOG1399		448	consensus Flavin-containing monooxygenase [Seconda	97.94
PRK07588		391	hypothetical protein; Provisional	97.94
TIGR01421		450	gluta_reduc_1 glutathione-disulfide reductase, ani	97.91
TIGR03140		515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	97.91
KOG2960		328	consensus Protein involved in thiamine biosynthesi	97.91
PRK07236		386	hypothetical protein; Provisional	97.9
PF05834		374	Lycopene_cycl: Lycopene cyclase protein; InterPro:	97.87
PRK06370		463	mercuric reductase; Validated	97.86
COG1249		454	Lpd Pyruvate/2-oxoglutarate dehydrogenase complex,	97.86
PLN00093		450	geranylgeranyl diphosphate reductase; Provisional	97.86
KOG2665		453	consensus Predicted FAD-dependent oxidoreductase [	97.86
TIGR01424		446	gluta_reduc_2 glutathione-disulfide reductase, pla	97.85
KOG2311		679	consensus NAD/FAD-utilizing protein possibly invol	97.85
PRK05976		472	dihydrolipoamide dehydrogenase; Validated	97.84
PRK06115		466	dihydrolipoamide dehydrogenase; Reviewed	97.84
PRK06467		471	dihydrolipoamide dehydrogenase; Reviewed	97.83
PRK06116		450	glutathione reductase; Validated	97.81
PTZ00058		561	glutathione reductase; Provisional	97.81
PRK05249		461	soluble pyridine nucleotide transhydrogenase; Prov	97.81
PF01494		356	FAD_binding_3: FAD binding domain; InterPro: IPR00	97.8
TIGR02032		295	GG-red-SF geranylgeranyl reductase family. This mo	97.79
PRK07818		466	dihydrolipoamide dehydrogenase; Reviewed	97.78
PLN02546		558	glutathione reductase	97.73
PRK08010		441	pyridine nucleotide-disulfide oxidoreductase; Prov	97.72
PRK06416		462	dihydrolipoamide dehydrogenase; Reviewed	97.72
PRK08020		391	ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin	97.71
PRK07251		438	pyridine nucleotide-disulfide oxidoreductase; Prov	97.69
PRK06327		475	dihydrolipoamide dehydrogenase; Validated	97.69
PF06100		500	Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross	97.68
KOG2844		856	consensus Dimethylglycine dehydrogenase precursor	97.68
PRK06292		460	dihydrolipoamide dehydrogenase; Validated	97.66
PRK09126		392	hypothetical protein; Provisional	97.65
PRK07494		388	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	97.65
TIGR02028		398	ChlP geranylgeranyl reductase. This model represen	97.64
PTZ00153		659	lipoamide dehydrogenase; Provisional	97.64
PRK07845		466	flavoprotein disulfide reductase; Reviewed	97.64
TIGR00031		377	UDP-GALP_mutase UDP-galactopyranose mutase. The ge	97.64
PLN02463		447	lycopene beta cyclase	97.61
COG0492		305	TrxB Thioredoxin reductase [Posttranslational modi	97.61
PRK05868		372	hypothetical protein; Validated	97.61
PRK05714		405	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	97.6
PRK09897		534	hypothetical protein; Provisional	97.6
TIGR01423		486	trypano_reduc trypanothione-disulfide reductase. T	97.59
TIGR01350		461	lipoamide_DH dihydrolipoamide dehydrogenase. The m	97.59
KOG2853		509	consensus Possible oxidoreductase [General functio	97.58
PRK13748		561	putative mercuric reductase; Provisional	97.58
PRK08849		384	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	97.57
TIGR03143		555	AhpF_homolog putative alkyl hydroperoxide reductas	97.56
KOG0029		501	consensus Amine oxidase [Secondary metabolites bio	97.55
PLN02507		499	glutathione reductase	97.55
PRK08850		405	2-octaprenyl-6-methoxyphenol hydroxylase; Validate	97.55
TIGR02053		463	MerA mercuric reductase. This model represents the	97.54
TIGR02733		492	desat_CrtD C-3',4' desaturase CrtD. Members of thi	97.51
PRK14694		468	putative mercuric reductase; Provisional	97.51
PTZ00052		499	thioredoxin reductase; Provisional	97.5
PF04820		454	Trp_halogenase: Tryptophan halogenase; InterPro: I	97.48
TIGR03377		516	glycerol3P_GlpA glycerol-3-phosphate dehydrogenase	97.45
TIGR01292		300	TRX_reduct thioredoxin-disulfide reductase. This m	97.45
TIGR02360		390	pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase.	97.42
PLN02676		487	polyamine oxidase	97.42
PRK14727		479	putative mercuric reductase; Provisional	97.41
TIGR01984		382	UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T	97.38
PRK06617		374	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	97.38
COG2907		447	Predicted NAD/FAD-binding protein [General functio	97.38
PTZ00367		567	squalene epoxidase; Provisional	97.36
TIGR01438		484	TGR thioredoxin and glutathione reductase selenopr	97.33
PLN02268		435	probable polyamine oxidase	97.33
PRK05329		422	anaerobic glycerol-3-phosphate dehydrogenase subun	97.32
PF13434		341	K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi	97.31
PRK05732		395	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	97.3
PLN02576		496	protoporphyrinogen oxidase	97.28
TIGR01989		437	COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T	97.28
PRK06996		398	hypothetical protein; Provisional	97.27
KOG1335		506	consensus Dihydrolipoamide dehydrogenase [Energy p	97.27
PRK11883		451	protoporphyrinogen oxidase; Reviewed	97.26
PRK07233		434	hypothetical protein; Provisional	97.25
PRK10262		321	thioredoxin reductase; Provisional	97.25
COG1231		450	Monoamine oxidase [Amino acid transport and metabo	97.25
TIGR03452		452	mycothione_red mycothione reductase. Mycothiol, a	97.23
TIGR01789		370	lycopene_cycl lycopene cyclase. This model represe	97.21
PRK08294		634	phenol 2-monooxygenase; Provisional	97.19
PRK06753		373	hypothetical protein; Provisional	97.18
PRK07846		451	mycothione reductase; Reviewed	97.17
PLN02568		539	polyamine oxidase	97.15
PF07992		201	Pyr_redox_2: Pyridine nucleotide-disulphide oxidor	97.15
KOG0405		478	consensus Pyridine nucleotide-disulphide oxidoredu	97.14
PRK07538		413	hypothetical protein; Provisional	97.06
PLN02927		668	antheraxanthin epoxidase/zeaxanthin epoxidase	97.05
PRK05335		436	tRNA (uracil-5-)-methyltransferase Gid; Reviewed	97.02
COG3349		485	Uncharacterized conserved protein [Function unknow	96.98
TIGR00562		462	proto_IX_ox protoporphyrinogen oxidase. This prote	96.97
COG1148		622	HdrA Heterodisulfide reductase, subunit A and rela	96.87
TIGR03315		1012	Se_ygfK putative selenate reductase, YgfK subunit.	96.86
KOG4716		503	consensus Thioredoxin reductase [Posttranslational	96.86
TIGR02731		453	phytoene_desat phytoene desaturase. Plants and cya	96.84
PRK12416		463	protoporphyrinogen oxidase; Provisional	96.83
COG3075		421	GlpB Anaerobic glycerol-3-phosphate dehydrogenase	96.79
KOG2614		420	consensus Kynurenine 3-monooxygenase and related f	96.77
PRK12831		464	putative oxidoreductase; Provisional	96.76
KOG2852		380	consensus Possible oxidoreductase [General functio	96.75
PRK06912		458	acoL dihydrolipoamide dehydrogenase; Validated	96.72
PF13454		156	NAD_binding_9: FAD-NAD(P)-binding	96.69
PF00996		438	GDI: GDP dissociation inhibitor; InterPro: IPR0182	96.69
PRK06475		400	salicylate hydroxylase; Provisional	96.68
TIGR00137		433	gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo	96.65
PLN02529		738	lysine-specific histone demethylase 1	96.62
PRK12810		471	gltD glutamate synthase subunit beta; Reviewed	96.59
TIGR03862		376	flavo_PP4765 uncharacterized flavoprotein, PP_4765	96.58
PLN02328		808	lysine-specific histone demethylase 1 homolog	96.56
PLN02487		569	zeta-carotene desaturase	96.52
COG1232		444	HemY Protoporphyrinogen oxidase [Coenzyme metaboli	96.48
TIGR01316		449	gltA glutamate synthase (NADPH), homotetrameric. T	96.46
PLN02612		567	phytoene desaturase	96.44
KOG0685		498	consensus Flavin-containing amine oxidase [Coenzym	96.43
TIGR02732		474	zeta_caro_desat carotene 7,8-desaturase. Carotene	96.41
KOG3855		481	consensus Monooxygenase involved in coenzyme Q (ub	96.39
PRK12779		944	putative bifunctional glutamate synthase subunit b	96.34
TIGR03219		414	salicylate_mono salicylate 1-monooxygenase. Member	96.33
PRK12778		752	putative bifunctional 2-polyprenylphenol hydroxyla	96.31
PF00070		80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.3
PRK12769		654	putative oxidoreductase Fe-S binding subunit; Revi	96.28
PRK09853		1019	putative selenate reductase subunit YgfK; Provisio	96.26
PRK11749		457	dihydropyrimidine dehydrogenase subunit A; Provisi	96.24
TIGR02352		337	thiamin_ThiO glycine oxidase ThiO. This family con	96.23
PRK12775		1006	putative trifunctional 2-polyprenylphenol hydroxyl	96.22
PLN02852		491	ferredoxin-NADP+ reductase	96.22
TIGR01350		461	lipoamide_DH dihydrolipoamide dehydrogenase. The m	96.21
KOG2403		642	consensus Succinate dehydrogenase, flavoprotein su	96.09
PRK07818		466	dihydrolipoamide dehydrogenase; Reviewed	96.05
PRK04965		377	NADH:flavorubredoxin oxidoreductase; Provisional	96.02
PLN03000		881	amine oxidase	95.97
PRK05976		472	dihydrolipoamide dehydrogenase; Validated	95.96
PRK12814		652	putative NADPH-dependent glutamate synthase small	95.88
COG4529		474	Uncharacterized protein conserved in bacteria [Fun	95.86
PRK06327		475	dihydrolipoamide dehydrogenase; Validated	95.86
PLN02976		1713	amine oxidase	95.78
PRK09754		396	phenylpropionate dioxygenase ferredoxin reductase	95.78
PRK12770		352	putative glutamate synthase subunit beta; Provisio	95.77
PRK08255		765	salicylyl-CoA 5-hydroxylase; Reviewed	95.75
PRK15317		517	alkyl hydroperoxide reductase subunit F; Provision	95.74
PRK14989		847	nitrite reductase subunit NirD; Provisional	95.73
TIGR01318		467	gltD_gamma_fam glutamate synthase small subunit fa	95.73
TIGR03140		515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	95.71
TIGR01316		449	gltA glutamate synthase (NADPH), homotetrameric. T	95.57
TIGR01317		485	GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal	95.54
TIGR02374		785	nitri_red_nirB nitrite reductase [NAD(P)H], large	95.52
PRK09564		444	coenzyme A disulfide reductase; Reviewed	95.47
TIGR02053		463	MerA mercuric reductase. This model represents the	95.46
PRK12809		639	putative oxidoreductase Fe-S binding subunit; Revi	95.46
PRK12831		464	putative oxidoreductase; Provisional	95.46
TIGR01292		300	TRX_reduct thioredoxin-disulfide reductase. This m	95.46
PTZ00188		506	adrenodoxin reductase; Provisional	95.44
PRK06567		1028	putative bifunctional glutamate synthase subunit b	95.41
TIGR02374		785	nitri_red_nirB nitrite reductase [NAD(P)H], large	95.35
KOG1276		491	consensus Protoporphyrinogen oxidase [Coenzyme tra	95.31
COG3634		520	AhpF Alkyl hydroperoxide reductase, large subunit	95.29
PRK12771		564	putative glutamate synthase (NADPH) small subunit;	95.28
TIGR03197		381	MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri	95.26
PRK06416		462	dihydrolipoamide dehydrogenase; Reviewed	95.22
PRK06467		471	dihydrolipoamide dehydrogenase; Reviewed	95.15
PRK10262		321	thioredoxin reductase; Provisional	95.13
PRK06370		463	mercuric reductase; Validated	95.13
PRK05249		461	soluble pyridine nucleotide transhydrogenase; Prov	95.07
PRK06116		450	glutathione reductase; Validated	94.94
TIGR01421		450	gluta_reduc_1 glutathione-disulfide reductase, ani	94.85
TIGR03385		427	CoA_CoA_reduc CoA-disulfide reductase. Members of	94.78
PRK13984		604	putative oxidoreductase; Provisional	94.74
COG1249		454	Lpd Pyruvate/2-oxoglutarate dehydrogenase complex,	94.68
PRK07846		451	mycothione reductase; Reviewed	94.58
PRK07845		466	flavoprotein disulfide reductase; Reviewed	94.51
KOG1439		440	consensus RAB proteins geranylgeranyltransferase c	94.5
PRK06115		466	dihydrolipoamide dehydrogenase; Reviewed	94.46
PRK09564		444	coenzyme A disulfide reductase; Reviewed	94.41
PRK09754		396	phenylpropionate dioxygenase ferredoxin reductase	94.38
PRK13512		438	coenzyme A disulfide reductase; Provisional	94.33
KOG4405		547	consensus GDP dissociation inhibitor [Signal trans	94.27
PLN02507		499	glutathione reductase	94.23
COG4716		587	Myosin-crossreactive antigen [Function unknown]	94.09
TIGR01424		446	gluta_reduc_2 glutathione-disulfide reductase, pla	93.83
KOG1800		468	consensus Ferredoxin/adrenodoxin reductase [Nucleo	93.78
PTZ00318		424	NADH dehydrogenase-like protein; Provisional	93.44
PRK14727		479	putative mercuric reductase; Provisional	93.25
PTZ00058		561	glutathione reductase; Provisional	93.22
PRK11749		457	dihydropyrimidine dehydrogenase subunit A; Provisi	93.16
COG5044		434	MRS6 RAB proteins geranylgeranyltransferase compon	92.78
COG0493		457	GltD NADPH-dependent glutamate synthase beta chain	92.77
TIGR01423		486	trypano_reduc trypanothione-disulfide reductase. T	92.73
COG1206		439	Gid NAD(FAD)-utilizing enzyme possibly involved in	92.55
PRK12769		654	putative oxidoreductase Fe-S binding subunit; Revi	92.4
TIGR03169		364	Nterm_to_SelD pyridine nucleotide-disulfide oxidor	92.21
PRK12778		752	putative bifunctional 2-polyprenylphenol hydroxyla	92.21
TIGR01318		467	gltD_gamma_fam glutamate synthase small subunit fa	92.11
PRK04965		377	NADH:flavorubredoxin oxidoreductase; Provisional	91.99
KOG3851		446	consensus Sulfide:quinone oxidoreductase/flavo-bin	91.91
COG3634		520	AhpF Alkyl hydroperoxide reductase, large subunit	91.9
KOG1336		478	consensus Monodehydroascorbate/ferredoxin reductas	91.76
KOG2755		334	consensus Oxidoreductase [General function predict	91.29
PRK05329		422	anaerobic glycerol-3-phosphate dehydrogenase subun	90.87
KOG0404		322	consensus Thioredoxin reductase [Posttranslational	90.8
KOG0399		2142	consensus Glutamate synthase [Amino acid transport	90.65
COG0446		415	HcaD Uncharacterized NAD(FAD)-dependent dehydrogen	90.61
PRK12779		944	putative bifunctional glutamate synthase subunit b	90.09
COG1252		405	Ndh NADH dehydrogenase, FAD-containing subunit [En	89.09
TIGR02731		453	phytoene_desat phytoene desaturase. Plants and cya	88.83
TIGR02733		492	desat_CrtD C-3',4' desaturase CrtD. Members of thi	88.79
PRK06567		1028	putative bifunctional glutamate synthase subunit b	88.72
COG0569		225	TrkA K+ transport systems, NAD-binding component [	88.3
PRK12775		1006	putative trifunctional 2-polyprenylphenol hydroxyl	88.22
COG1252		405	Ndh NADH dehydrogenase, FAD-containing subunit [En	88.03
PF02558		151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	87.36
PF13434		341	K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi	87.04
PF03721		185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	86.59
PRK07251		438	pyridine nucleotide-disulfide oxidoreductase; Prov	86.07
PF01210		157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	85.97
PRK06912		458	acoL dihydrolipoamide dehydrogenase; Validated	84.73
COG3486		436	IucD Lysine/ornithine N-monooxygenase [Secondary m	84.32
PRK14989		847	nitrite reductase subunit NirD; Provisional	83.97
PF13738		203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	83.62
TIGR02732		474	zeta_caro_desat carotene 7,8-desaturase. Carotene	83.46
PRK01438		480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	82.95
PRK02705		459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	82.54
PRK05708		305	2-dehydropantoate 2-reductase; Provisional	82.23
PRK13512		438	coenzyme A disulfide reductase; Provisional	82.22
PF02737		180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	81.89
PF01593		450	Amino_oxidase: Flavin containing amine oxidoreduct	81.37
PRK06292		460	dihydrolipoamide dehydrogenase; Validated	81.19
TIGR03452		452	mycothione_red mycothione reductase. Mycothiol, a	81.01
PF02254		116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	80.66
COG0281		432	SfcA Malic enzyme [Energy production and conversio	80.32
PLN02487		569	zeta-carotene desaturase	80.29
PRK06249		313	2-dehydropantoate 2-reductase; Provisional	80.05

>PLN02785 Protein HOTHEAD	Back alignment and domain information

Probab=100.00  E-value=6.4e-89  Score=740.92  Aligned_cols=563  Identities=78%  Similarity=1.262  Sum_probs=415.2

Q ss_pred             cccccCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcccEEEECCCCchHHHHHhhhccCeeeEeecCCCCCCCCcch
Q 007210           42 NLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVS  121 (612)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~~~~~~~~~~  121 (612)
                      .-+.+.|+|+..+...+....    +..  .  ...+.+|||||||+|.+||++|.+|+++.+|||||+|+....++.+.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~----~~~--~--~~~~~~yD~IIVG~G~aG~~lA~~Ls~~~~VLllE~G~~~~~~~~~~   96 (587)
T PLN02785         25 HFTPYRYPFIDKASSFSSSSS----SSS--S--SGGDSAYDYIVVGGGTAGCPLAATLSQNFSVLLLERGGVPFGNANVS   96 (587)
T ss_pred             cCCccCCchhhcccccccccc----ccc--c--ccccccCCEEEECcCHHHHHHHHHHhcCCcEEEEecCCCCCCCchhh
Confidence            345667889888776544110    000  1  11234699999999999999999999988999999998654444444


Q ss_pred             hHHHHHHHhcCCCCCCccccccCCCceeecccceecccccccceeeecCChhhhcCCCCChhhhcccchhhhhccccCCC
Q 007210          122 FLQNFHMTLADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPK  201 (612)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~  201 (612)
                      ....+.....++.+.+..|....++.+.++|||+|||+|.+|+|+|.|+++++++..||+|+.+.++|++.|+.....|.
T Consensus        97 ~~~~~~~~~~d~~~~~~~q~~~~~~~~~~~rGr~LGGsS~iN~~~y~Rg~~~d~~~~GW~~~~~~~~~~~~e~~~~~~~~  176 (587)
T PLN02785         97 FLENFHIGLADTSPTSASQAFISTDGVINARARVLGGGTCINAGFYSRASTRFIQKAGWDAKLVNESYPWVERQIVHWPK  176 (587)
T ss_pred             hHHhhCCcccccCCccccccccCCCceeccccceecchhhhcCeEEEeCCHHHhccCCCCcccccchHHHHhcccccCCC
Confidence            43333333445666666777777888999999999999999999999999999988899999999999999987655666


Q ss_pred             CchhHHHHHHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecHHHhhhhcCCCCcEEEeccEEEEEEecCCCCCCe
Q 007210          202 QEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPK  281 (612)
Q Consensus       202 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~  281 (612)
                      ..++...+.+++.++|+++++++..+...|...+.++++..|.|+++..+++.+.+.|++|++++.|+||++++++...+
T Consensus       177 ~~~~~~~~~~a~~e~G~~~~n~~~~d~~~G~~~g~~i~~~~g~R~saa~l~~~~~~~nl~Vl~~a~V~rIl~~~~~~~~r  256 (587)
T PLN02785        177 VAPWQAALRDSLLEVGVSPFNGFTYDHVYGTKVGGTIFDEFGRRHTAAELLAAGNPNKLRVLLHATVQKIVFDTSGKRPR  256 (587)
T ss_pred             cChHHHHHHHHHHHcCCCccCCCCCCCccceeeeEEEeCCCCEEcCHHHHHhhcCCCCeEEEeCCEEEEEEEcCCCCCce
Confidence            77889999999999999888876666666666666776778999998887777788999999999999999986432248


Q ss_pred             EEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCCCceEEeec
Q 007210          282 AVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPS  361 (612)
Q Consensus       282 v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~~~~~~~~~  361 (612)
                      ++||++.+.+|+.++++....++|+||||||+|+||+|||+|||||+++|+++||+++.|+|+||+||+|||...+.+..
T Consensus       257 a~GV~~~~~~g~~~~~~~~~~~~~eVILsAGai~sP~lL~~SGIGp~~~L~~~gIpvv~dlP~VG~NL~DHp~~~i~~~~  336 (587)
T PLN02785        257 ATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPVVLHNEHVGKGMADNPMNSIFVPS  336 (587)
T ss_pred             EEEEEEEECCCceEEEEeecccCceEEecccccCCHHHHHHcCCCCHHHHHHcCCCeeecCCCcccchhhCcccceEEEe
Confidence            99999987778765543221256899999999999999999999999999999999999999999999999999888877


Q ss_pred             CCCccchhhhhhccchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCCChHHHHHHhhhccCCCCCccccee
Q 007210          362 NRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGF  441 (612)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (612)
                      +.+......+.++....+.|.....++......+...++.+....+.+...++....++.+..+......++...+..++
T Consensus       337 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (587)
T PLN02785        337 KAPVEQSLIQTVGITKMGVYIEASSGFGQSPDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQAYIHRKKNLPHEAFNGGF  416 (587)
T ss_pred             CCCchhhhHhhhhhhccccceecccccccCchhhhhhccccccccccccccCcccccchhhhhhccCcccccccccccce
Confidence            65543222222222222223221122211100000111111111111112222222233222222111111111122234


Q ss_pred             EEEeecCCCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccchhHHHHHhhhhcccc
Q 007210          442 ILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANV  521 (612)
Q Consensus       442 ~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  521 (612)
                      ++..+++|.|||+|+|.|+||++.|.|++||+.++.|++.++++++.+++++++..+..+......+..++++.....|.
T Consensus       417 ~~~~l~~P~SrG~V~L~ssdp~~~P~i~~ny~~~p~Dl~~~~~g~r~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (587)
T PLN02785        417 ILEKIAGPISTGHLSLINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNHFTNFTQCDKQTMEKVLNMSVKANI  496 (587)
T ss_pred             EEEEecCCCcceEEEecCCCCCcCCccccccCCCHHHHHHHHHHHHHHHHHHcChhhhhhcccccccccccccccccccc
Confidence            55677899999999999999999999999999999999999999999999999988776652111000111111111222


Q ss_pred             cCCCCCCCCHHHHHHHHHhccccccccccccccCCccCCCCeEeCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHHH
Q 007210          522 NLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKI  601 (612)
Q Consensus       522 ~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i  601 (612)
                      +..|...+++++|++|+|+...+.||++|||+||+|||+++||||++||||||+||||.+|++||++|+||||||+|++|
T Consensus       497 ~~~p~~~~~d~~l~~~ir~~~~t~~H~~GTc~MG~VVD~~lrV~GV~~LRVvDaSi~P~~p~~np~atv~miaer~A~~I  576 (587)
T PLN02785        497 NLIPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVDQNYKVLGVSRLRVIDGSTFDESPGTNPQATVMMMGRYMGVKI  576 (587)
T ss_pred             ccCCCCCCCHHHHHHHHHHhcccccCCcccccCCCeECCCCeEeccCCeEEeecccCCCCCCCccHHHHHHHHHHHHHHH
Confidence            33455567889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCC
Q 007210          602 LRQRLGKAAGV  612 (612)
Q Consensus       602 ~~~~~~~~~~~  612 (612)
                      +++++++.++|
T Consensus       577 l~~~~~~~~~~  587 (587)
T PLN02785        577 LRERLGRAAGV  587 (587)
T ss_pred             HHHhhhhhcCC
Confidence            99999999876

>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only]	Back alignment and domain information

>PRK02106 choline dehydrogenase; Validated	Back alignment and domain information

>TIGR01810 betA choline dehydrogenase	Back alignment and domain information

>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR02462 pyranose_ox pyranose oxidase	Back alignment and domain information

>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ]	Back alignment and domain information

>PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ]	Back alignment and domain information

>PRK06481 fumarate reductase flavoprotein subunit; Validated	Back alignment and domain information

>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed	Back alignment and domain information

>PRK07121 hypothetical protein; Validated	Back alignment and domain information

>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed	Back alignment and domain information

>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed	Back alignment and domain information

>PRK12834 putative FAD-binding dehydrogenase; Reviewed	Back alignment and domain information

>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional	Back alignment and domain information

>PF00890 FAD_binding_2: FAD binding domain of the Pfam family	Back alignment and domain information

>PRK08274 tricarballylate dehydrogenase; Validated	Back alignment and domain information

>PTZ00306 NADH-dependent fumarate reductase; Provisional	Back alignment and domain information

>PRK12839 hypothetical protein; Provisional	Back alignment and domain information

>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>TIGR01813 flavo_cyto_c flavocytochrome c	Back alignment and domain information

>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed	Back alignment and domain information

>PRK12843 putative FAD-binding dehydrogenase; Reviewed	Back alignment and domain information

>PRK06175 L-aspartate oxidase; Provisional	Back alignment and domain information

>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit	Back alignment and domain information

>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK12842 putative succinate dehydrogenase; Reviewed	Back alignment and domain information

>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PLN02815 L-aspartate oxidase	Back alignment and domain information

>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional	Back alignment and domain information

>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK07395 L-aspartate oxidase; Provisional	Back alignment and domain information

>PRK06134 putative FAD-binding dehydrogenase; Reviewed	Back alignment and domain information

>PRK09077 L-aspartate oxidase; Provisional	Back alignment and domain information

>PRK09231 fumarate reductase flavoprotein subunit; Validated	Back alignment and domain information

>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK07804 L-aspartate oxidase; Provisional	Back alignment and domain information

>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK08626 fumarate reductase flavoprotein subunit; Provisional	Back alignment and domain information

>PRK08071 L-aspartate oxidase; Provisional	Back alignment and domain information

>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit	Back alignment and domain information

>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>TIGR00551 nadB L-aspartate oxidase	Back alignment and domain information

>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup	Back alignment and domain information

>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup	Back alignment and domain information

>COG2081 Predicted flavoproteins [General function prediction only]	Back alignment and domain information

>PRK07512 L-aspartate oxidase; Provisional	Back alignment and domain information

>PRK08275 putative oxidoreductase; Provisional	Back alignment and domain information

>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit	Back alignment and domain information

>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases	Back alignment and domain information

>PRK06854 adenylylsulfate reductase subunit alpha; Validated	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]	Back alignment and domain information

>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ	Back alignment and domain information

>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional	Back alignment and domain information

>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K	Back alignment and domain information

>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional	Back alignment and domain information

>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02661 Putative thiazole synthesis	Back alignment and domain information

>TIGR00292 thiazole biosynthesis enzyme	Back alignment and domain information

>PRK08401 L-aspartate oxidase; Provisional	Back alignment and domain information

>COG0029 NadB Aspartate oxidase [Coenzyme metabolism]	Back alignment and domain information

>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1	Back alignment and domain information

>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion]	Back alignment and domain information

>COG3573 Predicted oxidoreductase [General function prediction only]	Back alignment and domain information

>COG0579 Predicted dehydrogenase [General function prediction only]	Back alignment and domain information

>PLN02464 glycerol-3-phosphate dehydrogenase	Back alignment and domain information

>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A	Back alignment and domain information

>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed	Back alignment and domain information

>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase	Back alignment and domain information

>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form	Back alignment and domain information

>PTZ00383 malate:quinone oxidoreductase; Provisional	Back alignment and domain information

>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PRK13977 myosin-cross-reactive antigen; Provisional	Back alignment and domain information

>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]	Back alignment and domain information

>PRK05257 malate:quinone oxidoreductase; Validated	Back alignment and domain information

>PRK10157 putative oxidoreductase FixC; Provisional	Back alignment and domain information

>PTZ00363 rab-GDP dissociation inhibitor; Provisional	Back alignment and domain information

>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase	Back alignment and domain information

>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion]	Back alignment and domain information

>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated	Back alignment and domain information

>TIGR01377 soxA_mon sarcosine oxidase, monomeric form	Back alignment and domain information

>PRK11259 solA N-methyltryptophan oxidase; Provisional	Back alignment and domain information

>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed	Back alignment and domain information

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional	Back alignment and domain information

>PRK10015 oxidoreductase; Provisional	Back alignment and domain information

>PRK13339 malate:quinone oxidoreductase; Reviewed	Back alignment and domain information

>TIGR02730 carot_isom carotene isomerase	Back alignment and domain information

>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	Back alignment and domain information

>PRK00711 D-amino acid dehydrogenase small subunit; Validated	Back alignment and domain information

>TIGR00275 flavoprotein, HI0933 family	Back alignment and domain information

>PRK11728 hydroxyglutarate oxidase; Provisional	Back alignment and domain information

>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364	Back alignment and domain information

>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]	Back alignment and domain information

>PRK06185 hypothetical protein; Provisional	Back alignment and domain information

>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	Back alignment and domain information

>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria	Back alignment and domain information

>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle	Back alignment and domain information

>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	Back alignment and domain information

>PLN02172 flavin-containing monooxygenase FMO GS-OX	Back alignment and domain information

>PRK07208 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E	Back alignment and domain information

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A	Back alignment and domain information

>PLN02985 squalene monooxygenase	Back alignment and domain information

>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed	Back alignment and domain information

>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated	Back alignment and domain information

>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]	Back alignment and domain information

>TIGR02023 BchP-ChlP geranylgeranyl reductase	Back alignment and domain information

>TIGR00136 gidA glucose-inhibited division protein A	Back alignment and domain information

>PRK08244 hypothetical protein; Provisional	Back alignment and domain information

>PRK06126 hypothetical protein; Provisional	Back alignment and domain information

>PLN02697 lycopene epsilon cyclase	Back alignment and domain information

>TIGR02734 crtI_fam phytoene desaturase	Back alignment and domain information

>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	Back alignment and domain information

>PRK06847 hypothetical protein; Provisional	Back alignment and domain information

>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional	Back alignment and domain information

>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional	Back alignment and domain information

>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]	Back alignment and domain information

>PRK07045 putative monooxygenase; Reviewed	Back alignment and domain information

>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only]	Back alignment and domain information

>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family	Back alignment and domain information

>PRK06184 hypothetical protein; Provisional	Back alignment and domain information

>PRK07190 hypothetical protein; Provisional	Back alignment and domain information

>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated	Back alignment and domain information

>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit	Back alignment and domain information

>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism]	Back alignment and domain information

>TIGR01790 carotene-cycl lycopene cyclase family protein	Back alignment and domain information

>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated	Back alignment and domain information

>PRK08013 oxidoreductase; Provisional	Back alignment and domain information

>PRK06834 hypothetical protein; Provisional	Back alignment and domain information

>PRK11445 putative oxidoreductase; Provisional	Back alignment and domain information

>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []	Back alignment and domain information

>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	Back alignment and domain information

>PRK08132 FAD-dependent oxidoreductase; Provisional	Back alignment and domain information

>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form	Back alignment and domain information

>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G	Back alignment and domain information

>PRK08163 salicylate hydroxylase; Provisional	Back alignment and domain information

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional	Back alignment and domain information

>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PRK07588 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial	Back alignment and domain information

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit	Back alignment and domain information

>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only]	Back alignment and domain information

>PRK07236 hypothetical protein; Provisional	Back alignment and domain information

>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins	Back alignment and domain information

>PRK06370 mercuric reductase; Validated	Back alignment and domain information

>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>PLN00093 geranylgeranyl diphosphate reductase; Provisional	Back alignment and domain information

>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown]	Back alignment and domain information

>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant	Back alignment and domain information

>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK05976 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PRK06115 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK06467 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK06116 glutathione reductase; Validated	Back alignment and domain information

>PTZ00058 glutathione reductase; Provisional	Back alignment and domain information

>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional	Back alignment and domain information

>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways	Back alignment and domain information

>TIGR02032 GG-red-SF geranylgeranyl reductase family	Back alignment and domain information

>PRK07818 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PLN02546 glutathione reductase	Back alignment and domain information

>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional	Back alignment and domain information

>PRK06416 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed	Back alignment and domain information

>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional	Back alignment and domain information

>PRK06327 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis []	Back alignment and domain information

>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism]	Back alignment and domain information

>PRK06292 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PRK09126 hypothetical protein; Provisional	Back alignment and domain information

>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional	Back alignment and domain information

>TIGR02028 ChlP geranylgeranyl reductase	Back alignment and domain information

>PTZ00153 lipoamide dehydrogenase; Provisional	Back alignment and domain information

>PRK07845 flavoprotein disulfide reductase; Reviewed	Back alignment and domain information

>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase	Back alignment and domain information

>PLN02463 lycopene beta cyclase	Back alignment and domain information

>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK05868 hypothetical protein; Validated	Back alignment and domain information

>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional	Back alignment and domain information

>PRK09897 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01423 trypano_reduc trypanothione-disulfide reductase	Back alignment and domain information

>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase	Back alignment and domain information

>KOG2853 consensus Possible oxidoreductase [General function prediction only]	Back alignment and domain information

>PRK13748 putative mercuric reductase; Provisional	Back alignment and domain information

>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional	Back alignment and domain information

>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit	Back alignment and domain information

>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PLN02507 glutathione reductase	Back alignment and domain information

>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated	Back alignment and domain information

>TIGR02053 MerA mercuric reductase	Back alignment and domain information

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD	Back alignment and domain information

>PRK14694 putative mercuric reductase; Provisional	Back alignment and domain information

>PTZ00052 thioredoxin reductase; Provisional	Back alignment and domain information

>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan	Back alignment and domain information

>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit	Back alignment and domain information

>TIGR01292 TRX_reduct thioredoxin-disulfide reductase	Back alignment and domain information

>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase	Back alignment and domain information

>PLN02676 polyamine oxidase	Back alignment and domain information

>PRK14727 putative mercuric reductase; Provisional	Back alignment and domain information

>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase	Back alignment and domain information

>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	Back alignment and domain information

>COG2907 Predicted NAD/FAD-binding protein [General function prediction only]	Back alignment and domain information

>PTZ00367 squalene epoxidase; Provisional	Back alignment and domain information

>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein	Back alignment and domain information

>PLN02268 probable polyamine oxidase	Back alignment and domain information

>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated	Back alignment and domain information

>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B	Back alignment and domain information

>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	Back alignment and domain information

>PLN02576 protoporphyrinogen oxidase	Back alignment and domain information

>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6	Back alignment and domain information

>PRK06996 hypothetical protein; Provisional	Back alignment and domain information

>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion]	Back alignment and domain information

>PRK11883 protoporphyrinogen oxidase; Reviewed	Back alignment and domain information

>PRK07233 hypothetical protein; Provisional	Back alignment and domain information

>PRK10262 thioredoxin reductase; Provisional	Back alignment and domain information

>COG1231 Monoamine oxidase [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR03452 mycothione_red mycothione reductase	Back alignment and domain information

>TIGR01789 lycopene_cycl lycopene cyclase	Back alignment and domain information

>PRK08294 phenol 2-monooxygenase; Provisional	Back alignment and domain information

>PRK06753 hypothetical protein; Provisional	Back alignment and domain information

>PRK07846 mycothione reductase; Reviewed	Back alignment and domain information

>PLN02568 polyamine oxidase	Back alignment and domain information

>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Back alignment and domain information

>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>PRK07538 hypothetical protein; Provisional	Back alignment and domain information

>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase	Back alignment and domain information

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed	Back alignment and domain information

>COG3349 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR00562 proto_IX_ox protoporphyrinogen oxidase	Back alignment and domain information

>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]	Back alignment and domain information

>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit	Back alignment and domain information

>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>TIGR02731 phytoene_desat phytoene desaturase	Back alignment and domain information

>PRK12416 protoporphyrinogen oxidase; Provisional	Back alignment and domain information

>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	Back alignment and domain information

>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only]	Back alignment and domain information

>PRK12831 putative oxidoreductase; Provisional	Back alignment and domain information

>KOG2852 consensus Possible oxidoreductase [General function prediction only]	Back alignment and domain information

>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PF13454 NAD_binding_9: FAD-NAD(P)-binding	Back alignment and domain information

>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function	Back alignment and domain information

>PRK06475 salicylate hydroxylase; Provisional	Back alignment and domain information

>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase	Back alignment and domain information

>PLN02529 lysine-specific histone demethylase 1	Back alignment and domain information

>PRK12810 gltD glutamate synthase subunit beta; Reviewed	Back alignment and domain information

>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family	Back alignment and domain information

>PLN02328 lysine-specific histone demethylase 1 homolog	Back alignment and domain information

>PLN02487 zeta-carotene desaturase	Back alignment and domain information

>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]	Back alignment and domain information

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric	Back alignment and domain information

>PLN02612 phytoene desaturase	Back alignment and domain information

>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism]	Back alignment and domain information

>TIGR02732 zeta_caro_desat carotene 7,8-desaturase	Back alignment and domain information

>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion]	Back alignment and domain information

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional	Back alignment and domain information

>TIGR03219 salicylate_mono salicylate 1-monooxygenase	Back alignment and domain information

>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional	Back alignment and domain information

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Back alignment and domain information

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed	Back alignment and domain information

>PRK09853 putative selenate reductase subunit YgfK; Provisional	Back alignment and domain information

>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional	Back alignment and domain information

>TIGR02352 thiamin_ThiO glycine oxidase ThiO	Back alignment and domain information

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional	Back alignment and domain information

>PLN02852 ferredoxin-NADP+ reductase	Back alignment and domain information

>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase	Back alignment and domain information

>KOG2403 consensus Succinate dehydrogenase, flavoprotein subunit [Energy production and conversion]	Back alignment and domain information

>PRK07818 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional	Back alignment and domain information

>PLN03000 amine oxidase	Back alignment and domain information

>PRK05976 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional	Back alignment and domain information

>COG4529 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PRK06327 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>PLN02976 amine oxidase	Back alignment and domain information

>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	Back alignment and domain information

>PRK12770 putative glutamate synthase subunit beta; Provisional	Back alignment and domain information

>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed	Back alignment and domain information

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional	Back alignment and domain information

>PRK14989 nitrite reductase subunit NirD; Provisional	Back alignment and domain information

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial	Back alignment and domain information

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit	Back alignment and domain information

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric	Back alignment and domain information

>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit	Back alignment and domain information

>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit	Back alignment and domain information

>PRK09564 coenzyme A disulfide reductase; Reviewed	Back alignment and domain information

>TIGR02053 MerA mercuric reductase	Back alignment and domain information

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed	Back alignment and domain information

>PRK12831 putative oxidoreductase; Provisional	Back alignment and domain information

>TIGR01292 TRX_reduct thioredoxin-disulfide reductase	Back alignment and domain information

>PTZ00188 adrenodoxin reductase; Provisional	Back alignment and domain information

>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated	Back alignment and domain information

>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit	Back alignment and domain information

>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism]	Back alignment and domain information

>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional	Back alignment and domain information

>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain	Back alignment and domain information

>PRK06416 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK06467 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK10262 thioredoxin reductase; Provisional	Back alignment and domain information

>PRK06370 mercuric reductase; Validated	Back alignment and domain information

>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional	Back alignment and domain information

>PRK06116 glutathione reductase; Validated	Back alignment and domain information

>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial	Back alignment and domain information

>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase	Back alignment and domain information

>PRK13984 putative oxidoreductase; Provisional	Back alignment and domain information

>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>PRK07846 mycothione reductase; Reviewed	Back alignment and domain information

>PRK07845 flavoprotein disulfide reductase; Reviewed	Back alignment and domain information

>KOG1439 consensus RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK06115 dihydrolipoamide dehydrogenase; Reviewed	Back alignment and domain information

>PRK09564 coenzyme A disulfide reductase; Reviewed	Back alignment and domain information

>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	Back alignment and domain information

>PRK13512 coenzyme A disulfide reductase; Provisional	Back alignment and domain information

>KOG4405 consensus GDP dissociation inhibitor [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PLN02507 glutathione reductase	Back alignment and domain information

>COG4716 Myosin-crossreactive antigen [Function unknown]	Back alignment and domain information

>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant	Back alignment and domain information

>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism]	Back alignment and domain information

>PTZ00318 NADH dehydrogenase-like protein; Provisional	Back alignment and domain information

>PRK14727 putative mercuric reductase; Provisional	Back alignment and domain information

>PTZ00058 glutathione reductase; Provisional	Back alignment and domain information

>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional	Back alignment and domain information

>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only]	Back alignment and domain information

>TIGR01423 trypano_reduc trypanothione-disulfide reductase	Back alignment and domain information

>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed	Back alignment and domain information

>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein	Back alignment and domain information

>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional	Back alignment and domain information

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial	Back alignment and domain information

>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional	Back alignment and domain information

>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion]	Back alignment and domain information

>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]	Back alignment and domain information

>KOG2755 consensus Oxidoreductase [General function prediction only]	Back alignment and domain information

>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated	Back alignment and domain information

>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	Back alignment and domain information

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional	Back alignment and domain information

>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	Back alignment and domain information

>TIGR02731 phytoene_desat phytoene desaturase	Back alignment and domain information

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD	Back alignment and domain information

>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated	Back alignment and domain information

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional	Back alignment and domain information

>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	Back alignment and domain information

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1	Back alignment and domain information

>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B	Back alignment and domain information

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]	Back alignment and domain information

>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional	Back alignment and domain information

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate	Back alignment and domain information

>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PRK14989 nitrite reductase subunit NirD; Provisional	Back alignment and domain information

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A	Back alignment and domain information

>TIGR02732 zeta_caro_desat carotene 7,8-desaturase	Back alignment and domain information

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	Back alignment and domain information

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional	Back alignment and domain information

>PRK05708 2-dehydropantoate 2-reductase; Provisional	Back alignment and domain information

>PRK13512 coenzyme A disulfide reductase; Provisional	Back alignment and domain information

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1	Back alignment and domain information

>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO)	Back alignment and domain information

>PRK06292 dihydrolipoamide dehydrogenase; Validated	Back alignment and domain information

>TIGR03452 mycothione_red mycothione reductase	Back alignment and domain information

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus	Back alignment and domain information

>COG0281 SfcA Malic enzyme [Energy production and conversion]	Back alignment and domain information

>PLN02487 zeta-carotene desaturase	Back alignment and domain information

>PRK06249 2-dehydropantoate 2-reductase; Provisional	Back alignment and domain information

Homologous Structure Templates