Citrus Sinensis ID: 007622

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-----
MASFQSPITMRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQRQREKKKVQSQVVVEQENVFGSRPGSSNRRIPNRSLNGSFSNANPLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFARFGHASHFRDETASVVSTFSGPLSP
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccEEEccccccccEEccccccccc
masfqspitmrSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLgerslpgrpekmtgTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAglseyddsstnvivnendlSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWnlmgtpyndrrkfsHVTSLLSvssaevsepgsltHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICnnshmeipsqskmDKITSLLnsgeidhadLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEysmdenrysvsrgahrNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKvflydevplLAMLEEYNMARQEREEEKQRQREKKKVQSQVVVEQenvfgsrpgssnrripnrslngsfsnanplnrrISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFarfghashfrdetasvvstfsgplsp
masfqspitmrssALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSlgerslpgrpekMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGlseyddsstnviVNENDLSLKKLEEYQIELqglhnekndrlqRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSsaevsepgslTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNShmeipsqskMDKITSLLNSGEIDHADLLTSMDEQISRakeeassrkvimekverwmlardeerwleeysmdenrysvsrgahrnlrraerarvtvkkipaLVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQrqrekkkvqsqvvveqenvfgsrpgssnrripnrslngsfsnanpLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFARfghashfrdetasvvstfsgplsp
MASFQSPITMRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESleeekkkrleklHQLGKALTNLWNLMGTPYNDRRKFSHVTsllsvssaevsePGSLTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMArqereeekqrqrekkkvqsqvvveqeNVFGSRPGSSNRRIPNRSLNGSFSNANPLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFARFGHASHFRDETASVVSTFSGPLSP
*************ALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLH********EFTHLLL******************************************FRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKL*****************LHQLGKALTNLWNLMGTPYNDRRKFSHVTSLL*****************************************************************************************************IMEKVERWMLARDEERWLEEY********************ERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEY***************************************************************MGIQQLGTYSINSATQGISFIK*************************************
**************LLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFT********************TLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAG***************NDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVH***********NISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSL*************LTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWL***************************V*VKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAM******************************************************************************************************************************
*********MRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTS************GSLTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDE***********RKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMA*********************VVEQEN*********NRRIPNRSLNGSFSNANPLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFARFGHASHFRDETA************
**************LLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLGERSLPGR***MTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGL*******TNVIVNENDLSLKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSEL*GISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTHNIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQRQREKKKVQSQVVVEQENVF***************************************************************FAR*******R*ET*************
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MASFQSPITMRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKxxxxxxxxxxxxxxxxxxxxxFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNExxxxxxxxxxxxxxxxxxxxxxxxxxxxVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTHNIxxxxxxxxxxxxxxxxxxxxxLFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVVVEQENVFGSRPGSSNRRIPNRSLNGSFSNANPLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQEQKKFARFGHASHFRDETASVVSTFSGPLSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query595 2.2.26 [Sep-21-2011]
Q9C7G0562 65-kDa microtubule-associ yes no 0.937 0.992 0.685 0.0
Q9FLP0587 65-kDa microtubule-associ no no 0.889 0.901 0.521 1e-144
Q8LEG3578 65-kDa microtubule-associ no no 0.884 0.910 0.501 1e-140
Q9SIS3608 65-kDa microtubule-associ no no 0.875 0.856 0.439 1e-124
Q8L836603 65-kDa microtubule-associ no no 0.988 0.975 0.393 1e-120
Q9ZVJ3550 65-kDa microtubule-associ no no 0.852 0.921 0.456 1e-119
Q9FHM4 707 65-kDa microtubule-associ no no 0.880 0.741 0.443 1e-112
Q9LZY0677 65-kDa microtubule-associ no no 0.855 0.751 0.387 5e-96
Q4PSA3549 65-kDa microtubule-associ no no 0.843 0.914 0.388 4e-84
O43663620 Protein regulator of cyto no no 0.784 0.753 0.263 5e-11
>sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2 Back     alignment and function desciption
 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/563 (68%), Positives = 462/563 (82%), Gaps = 5/563 (0%)

Query: 1   MASFQSPITMRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKV 60
           M S Q+PI MRSS+LL+TSCGYLL+ELQMIWDEVGED+FEREKVLLD+EQEC++ YRRKV
Sbjct: 1   MGSLQTPIEMRSSSLLDTSCGYLLRELQMIWDEVGEDKFEREKVLLDIEQECVEAYRRKV 60

Query: 61  DRANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRL 120
           D AN+SR+RLHQELAESEAE TH LL LGERS+PGRPEK  GTL+EQLDSI PALREMRL
Sbjct: 61  DHANVSRSRLHQELAESEAELTHFLLCLGERSVPGRPEKKGGTLREQLDSIAPALREMRL 120

Query: 121 RKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHN 180
           RK+ERV QFR+V+ +IQKISAEIAG S Y+DS+  + +++NDLS KKLEEYQ EL  LH+
Sbjct: 121 RKDERVKQFRSVKGEIQKISAEIAGRSTYEDSTRKITIDDNDLSNKKLEEYQNELHRLHD 180

Query: 181 EKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTV 240
           EKN+RLQ+V+ YI A+R LSATLG E+SMIITK+HPSL++L+GISKNISD+IL KLN TV
Sbjct: 181 EKNERLQKVDIYICAIRDLSATLGTEASMIITKIHPSLNDLYGISKNISDDILKKLNGTV 240

Query: 241 ESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTH 300
            SLEEEK KRLEKLH LG+AL+NLWNLM   Y DR+KF HV  LLS + ++V  PGS+T 
Sbjct: 241 VSLEEEKHKRLEKLHHLGRALSNLWNLMDASYEDRQKFFHVIDLLSSAPSDVCAPGSITL 300

Query: 301 NIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGE 360
           +II+QAEAEVKRLDQLKAS+++ELF+KKQKELED CN SHME PS ++M  IT+L++SGE
Sbjct: 301 DIIQQAEAEVKRLDQLKASRIKELFIKKQKELEDTCNMSHMETPS-TEMGNITNLVDSGE 359

Query: 361 IDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGA 420
           +DH DLL +MDE+I+RAKEEA+SRK I+EKV+RWMLA DEERWLEEY  DENRYSVSR A
Sbjct: 360 VDHVDLLAAMDEKIARAKEEAASRKGIIEKVDRWMLASDEERWLEEYDQDENRYSVSRNA 419

Query: 421 HRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQER 480
           HRNLRRAERAR+TV KI  LV+S+    KSWE ER+KVFLY+EVPL+AML+EYN  RQE+
Sbjct: 420 HRNLRRAERARITVSKISGLVESILVKAKSWEVERQKVFLYNEVPLVAMLQEYNKLRQEK 479

Query: 481 EEEKQRQREKKKVQ-SQVVVEQENVFGSRPGSSNRRIPNRSLNGSFSNANPLNRRISMGI 539
           E EKQR RE KK+   Q V E +N + +RP SSNRRI NRS+NG F + +P+NR+ S G 
Sbjct: 480 EMEKQRLREMKKMSIPQPVAEGDNFYMARPASSNRRISNRSMNGGFGSGSPINRKYSGGF 539

Query: 540 QQLGTYSINSATQGISFIKEGRK 562
                   N    G S  +E RK
Sbjct: 540 NNTNN---NYTALGTSIRRESRK 559

Arabidopsis thaliana (taxid: 3702)
>sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LEG3|MA652_ARATH 65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana GN=MAP65-2 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana GN=MAP65-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8L836|MA657_ARATH 65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana GN=MAP65-7 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZVJ3|MA655_ARATH 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2 Back     alignment and function description
>sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZY0|MA654_ARATH 65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2 Back     alignment and function description
>sp|Q4PSA3|MA659_ARATH 65-kDa microtubule-associated protein 9 OS=Arabidopsis thaliana GN=MAP65-9 PE=2 SV=1 Back     alignment and function description
>sp|O43663|PRC1_HUMAN Protein regulator of cytokinesis 1 OS=Homo sapiens GN=PRC1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query595
359473742595 PREDICTED: 65-kDa microtubule-associated 1.0 1.0 0.833 0.0
359473744582 PREDICTED: 65-kDa microtubule-associated 0.978 1.0 0.811 0.0
255547734583 PLE, putative [Ricinus communis] gi|2235 0.978 0.998 0.820 0.0
297738446567 unnamed protein product [Vitis vinifera] 0.952 1.0 0.834 0.0
224057715581 predicted protein [Populus trichocarpa] 0.954 0.977 0.787 0.0
449452905582 PREDICTED: 65-kDa microtubule-associated 0.978 1.0 0.747 0.0
356538089594 PREDICTED: 65-kDa microtubule-associated 0.994 0.996 0.725 0.0
357463023628 Microtubule-associated protein MAP65-1a 0.996 0.944 0.682 0.0
356569180551 PREDICTED: 65-kDa microtubule-associated 0.904 0.976 0.747 0.0
224072602486 predicted protein [Populus trichocarpa] 0.816 1.0 0.829 0.0
>gi|359473742|ref|XP_002271779.2| PREDICTED: 65-kDa microtubule-associated protein 8-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1011 bits (2613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/595 (83%), Positives = 538/595 (90%)

Query: 1   MASFQSPITMRSSALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKV 60
           M S Q+PITMRSSA+LE+SCGYLLQELQMIWDEVGEDQ+EREKVLLDLEQECL+VYRRKV
Sbjct: 1   MGSIQTPITMRSSAILESSCGYLLQELQMIWDEVGEDQYEREKVLLDLEQECLEVYRRKV 60

Query: 61  DRANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRL 120
           D ANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKM GTLKEQLDSITP LREM+L
Sbjct: 61  DSANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMAGTLKEQLDSITPVLREMQL 120

Query: 121 RKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHN 180
           RKEER+NQFRAVQ QIQKISAEIAG SEYDDSS+ VIVNENDLSLKKLEEYQIELQ LH 
Sbjct: 121 RKEERMNQFRAVQGQIQKISAEIAGQSEYDDSSSTVIVNENDLSLKKLEEYQIELQRLHK 180

Query: 181 EKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGISKNISDNILAKLNSTV 240
           EK+DRLQRVEKYI  V++LS TLGM+SS+IITKVHPSL+EL GISKNISD+ILAKLNSTV
Sbjct: 181 EKSDRLQRVEKYISTVQNLSTTLGMDSSVIITKVHPSLNELCGISKNISDSILAKLNSTV 240

Query: 241 ESLEEEKKKRLEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTH 300
           ESLEEEKK RLEKLH LGKALTNLWNLM TPY DR+ FSHVT LLSVSSAE+S PGSLT 
Sbjct: 241 ESLEEEKKTRLEKLHHLGKALTNLWNLMDTPYEDRQLFSHVTKLLSVSSAEISNPGSLTL 300

Query: 301 NIIEQAEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGE 360
           + I+QAEAEV+RLD LKASKM+ELFLKKQ ELE+ICN SHMEIPSQS+MD I +L+NSGE
Sbjct: 301 DTIKQAEAEVERLDHLKASKMKELFLKKQIELEEICNRSHMEIPSQSEMDNIMNLINSGE 360

Query: 361 IDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGA 420
           IDHADLL SMDEQISRA+EEASSRK IMEKVE+WMLARDEERWLEEY  DENRYSVSRGA
Sbjct: 361 IDHADLLMSMDEQISRAREEASSRKTIMEKVEKWMLARDEERWLEEYMRDENRYSVSRGA 420

Query: 421 HRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQER 480
           HRNL+RAERAR+TV K+PALVD L A TKSWEEER KVFLYDEVPLLAMLEEYN++RQER
Sbjct: 421 HRNLKRAERARITVNKLPALVDLLIAKTKSWEEERTKVFLYDEVPLLAMLEEYNLSRQER 480

Query: 481 EEEKQRQREKKKVQSQVVVEQENVFGSRPGSSNRRIPNRSLNGSFSNANPLNRRISMGIQ 540
           EEEKQRQREKKKVQSQVVVEQEN+FGSRP +S+RR+ N SLNG FS A  LNRR+S+GIQ
Sbjct: 481 EEEKQRQREKKKVQSQVVVEQENLFGSRPSTSSRRLSNMSLNGGFSTATALNRRLSLGIQ 540

Query: 541 QLGTYSINSATQGISFIKEGRKVQEQKKFARFGHASHFRDETASVVSTFSGPLSP 595
           QLG+ SINS TQG+SFIKEG+K Q QK   R    SH R+ETASVV TFSGPLSP
Sbjct: 541 QLGSNSINSPTQGLSFIKEGKKAQGQKMSVRLSLVSHPREETASVVPTFSGPLSP 595

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359473744|ref|XP_003631354.1| PREDICTED: 65-kDa microtubule-associated protein 8-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255547734|ref|XP_002514924.1| PLE, putative [Ricinus communis] gi|223545975|gb|EEF47478.1| PLE, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297738446|emb|CBI27647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224057715|ref|XP_002299300.1| predicted protein [Populus trichocarpa] gi|222846558|gb|EEE84105.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449452905|ref|XP_004144199.1| PREDICTED: 65-kDa microtubule-associated protein 8-like [Cucumis sativus] gi|449489247|ref|XP_004158258.1| PREDICTED: 65-kDa microtubule-associated protein 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538089|ref|XP_003537537.1| PREDICTED: 65-kDa microtubule-associated protein 8-like [Glycine max] Back     alignment and taxonomy information
>gi|357463023|ref|XP_003601793.1| Microtubule-associated protein MAP65-1a [Medicago truncatula] gi|355490841|gb|AES72044.1| Microtubule-associated protein MAP65-1a [Medicago truncatula] Back     alignment and taxonomy information
>gi|356569180|ref|XP_003552783.1| PREDICTED: 65-kDa microtubule-associated protein 8-like [Glycine max] Back     alignment and taxonomy information
>gi|224072602|ref|XP_002303801.1| predicted protein [Populus trichocarpa] gi|222841233|gb|EEE78780.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query595
TAIR|locus:2116267578 MAP65-2 "AT4G26760" [Arabidops 0.895 0.922 0.448 5.2e-113
TAIR|locus:2059713608 ATMAP65-6 [Arabidopsis thalian 0.873 0.855 0.410 1.6e-104
TAIR|locus:2006737603 MAP65-7 "AT1G14690" [Arabidops 0.899 0.887 0.385 1.2e-99
TAIR|locus:2153152 707 PLE "AT5G51600" [Arabidopsis t 0.887 0.746 0.398 1e-98
TAIR|locus:2167978549 MAP65-9 "microtubule-associate 0.774 0.839 0.379 1.5e-87
ZFIN|ZDB-GENE-020801-3598 prc1a "protein regulator of cy 0.282 0.280 0.248 6.9e-11
UNIPROTKB|F8W9B5566 PRC1 "Protein regulator of cyt 0.278 0.293 0.239 3.1e-10
UNIPROTKB|F1NGV8607 PRC1 "Uncharacterized protein" 0.240 0.235 0.25 3.2e-10
DICTYBASE|DDB_G0280249 771 DDB_G0280249 "MAP65/ASE1 famil 0.727 0.561 0.182 4.9e-10
UNIPROTKB|H9KV59606 PRC1 "Protein regulator of cyt 0.278 0.273 0.239 6.4e-10
TAIR|locus:2116267 MAP65-2 "AT4G26760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
 Identities = 245/546 (44%), Positives = 344/546 (63%)

Query:     8 ITMRSSALL-ETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANIS 66
             +T   + LL E +CG LLQ+LQ IWDEVGE   ER+K+LL +E+ECL+VY++KV+ A  S
Sbjct:     3 VTEAENPLLGEITCGTLLQKLQEIWDEVGESDEERDKLLLQIEEECLNVYKKKVELAAKS 62

Query:    67 RARLHQELAESEAEFTHLLLSLGERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERV 126
             RA L Q L+++  E ++L  +LGE+S    P+K +GT+KEQL +I PAL ++  +KEERV
Sbjct:    63 RAELLQTLSDATVELSNLTTALGEKSYIDIPDKTSGTIKEQLSAIAPALEQLWQQKEERV 122

Query:   127 NQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEYQIELQGLHNEKNDRL 186
               F  VQ+QIQKI  EIAG     ++  +V V+E DLSLK+L+++Q +LQ L  EK+DRL
Sbjct:   123 RAFSDVQSQIQKICEEIAGGL---NNGPHV-VDETDLSLKRLDDFQRKLQELQKEKSDRL 178

Query:   187 QRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFGI-SKNISDNILAKLNSTVESXXX 245
             Q+V +++  V  L A L ++    +T+VHPSL E  G+ +K+IS+  LA+L  TV +   
Sbjct:   179 QKVLEFVSTVHDLCAVLRLDFLSTVTEVHPSLDEANGVQTKSISNETLARLAKTVLTLKE 238

Query:   246 XXXXXXXXXHQLGKALTNLWNLMGTPYNDRRKFSHVTXXXXXXXXXXXXPGSLTHNIIEQ 305
                       +L   LT+LWNLM T   +R  F HVT             G+L  ++IEQ
Sbjct:   239 DKMQRLKKLQELATQLTDLWNLMDTSDEERELFDHVTSNISASVHEVTASGALALDLIEQ 298

Query:   306 AEAEVKRLDQLKASKMQELFLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHAD 365
             AE EV RLDQLK+S+M+E+  KKQ ELE+I   +H+EI  +   ++I SL+++G  +  +
Sbjct:   299 AEVEVDRLDQLKSSRMKEIAFKKQSELEEIYARAHIEIKPEVVRERIMSLIDAGNTEPTE 358

Query:   366 LLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLR 425
             LL  MD QI++AKEEA SRK I+++VE+WM A +EE WLE+Y+ D+NRYS SRGAH NL+
Sbjct:   359 LLADMDSQIAKAKEEAFSRKEILDRVEKWMSACEEESWLEDYNRDQNRYSASRGAHLNLK 418

Query:   426 RAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMAXXXXXXXXX 485
             RAE+AR+ V KI A+VD+L A T++WEEE    F YD VPLLAML+EY M          
Sbjct:   419 RAEKARILVSKITAMVDTLIAKTRAWEEENSMSFEYDGVPLLAMLDEYTMLRQEREDEKR 478

Query:   486 XXXXXXXXXXXXXXXXXNVFGSRPG-----SSNRRIPNRSLNGSFSNANPLNRRISMGIQ 540
                              + FGS+P      S+ + +  R +NG   N  P+ RR+SM   
Sbjct:   479 RLKEQKKQQEQPHTDQESAFGSKPSPARPVSAKKPVGTR-VNGGGLNETPM-RRLSMNSN 536

Query:   541 QLGTYS 546
             Q G+ S
Sbjct:   537 QNGSKS 542
GO:0003674 "molecular_function" evidence=ND
GO:0009524 "phragmoplast" evidence=IDA
GO:0009574 "preprophase band" evidence=IDA
GO:0055028 "cortical microtubule" evidence=IDA
GO:0000910 "cytokinesis" evidence=IGI
GO:0005819 "spindle" evidence=IDA
GO:0005874 "microtubule" evidence=IDA
GO:0008283 "cell proliferation" evidence=IGI;RCA
GO:0048528 "post-embryonic root development" evidence=IGI
GO:0072686 "mitotic spindle" evidence=IDA
GO:0051302 "regulation of cell division" evidence=IGI
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000278 "mitotic cell cycle" evidence=RCA
GO:0000280 "nuclear division" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0006275 "regulation of DNA replication" evidence=RCA
GO:0007000 "nucleolus organization" evidence=RCA
GO:0007067 "mitosis" evidence=RCA
GO:0007129 "synapsis" evidence=RCA
GO:0007131 "reciprocal meiotic recombination" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA
GO:0010564 "regulation of cell cycle process" evidence=RCA
GO:0016458 "gene silencing" evidence=RCA
GO:0016572 "histone phosphorylation" evidence=RCA
GO:0034968 "histone lysine methylation" evidence=RCA
GO:0042023 "DNA endoreduplication" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0051225 "spindle assembly" evidence=RCA
GO:0051258 "protein polymerization" evidence=RCA
TAIR|locus:2059713 ATMAP65-6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006737 MAP65-7 "AT1G14690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153152 PLE "AT5G51600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167978 MAP65-9 "microtubule-associated protein 65-9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020801-3 prc1a "protein regulator of cytokinesis 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F8W9B5 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGV8 PRC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280249 DDB_G0280249 "MAP65/ASE1 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|H9KV59 PRC1 "Protein regulator of cytokinesis 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C7G0MA658_ARATHNo assigned EC number0.68560.93780.9928yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query595
pfam03999619 pfam03999, MAP65_ASE1, Microtubule associated prot 6e-36
>gnl|CDD|217835 pfam03999, MAP65_ASE1, Microtubule associated protein (MAP65/ASE1 family) Back     alignment and domain information 
 Score =  142 bits (359), Expect = 6e-36
 Identities = 113/513 (22%), Positives = 216/513 (42%), Gaps = 45/513 (8%)

Query: 45  LLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLG--------------- 89
           L D++       +   + ++  +  + +++A   AE   L    G               
Sbjct: 6   LADIKIHYSSFEKDLKEESSTKKQAILKDIAVLRAEIKRLSAENGIEQDISNSLLHKEPL 65

Query: 90  ----ERSLPGRPEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAG 145
               E+ +  RP+     L   L  +   L  +R +K ER  + + +  Q+ ++  E   
Sbjct: 66  QLLSEKDILQRPKSFP--LGVWLLKLRDQLESLRKQKAERRAEIKELLHQLLQLCNE--- 120

Query: 146 LSEYDDSSTNVIVNENDLS-LKKLEEYQIELQGLHNEKNDRLQRVEKYIDAVRSLSATLG 204
           L E   S      +   L  L++LE ++  L  L  EK  RL+ V+    +++SL + LG
Sbjct: 121 LGEPPLSLLRKDADPLSLPNLEELEHFRERLGELREEKVRRLEEVDSLKQSIKSLCSLLG 180

Query: 205 MESSMIITKVHPSLSELFGISKNISDNILAKLNSTVESLEEEKKKRLEKLHQLGKALTNL 264
              +    +              ++   + KL+  +E+L  +KK+R +K+  L + +  L
Sbjct: 181 TPPARTDFEQDVLSYGEIPNDHCVTRETIDKLDKMLENLAAQKKQRADKIDDLREQIQEL 240

Query: 265 WNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTHNIIEQAEAEVKRLDQLKASKMQEL 324
           WN +     ++++F    ++LS  S +               E EV+RL+ LK   +++ 
Sbjct: 241 WNRLQISDEEQKRFVREATILSQESIKR-------------LEEEVERLEALKKQNLKKF 287

Query: 325 FLKKQKELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSR 384
               + E++++ +       S+ +    T      E+    LL   + +I R KEE SS 
Sbjct: 288 IEDLRIEIQELWDLLFY---SEEQRKSFTPYYE--ELYTEQLLEQHENEIKRLKEEYSSN 342

Query: 385 KVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKKIPALVDSL 444
           K I+E +E+W    +    LE  + D NR++ +RG H  L+  +  +   +K+P + + L
Sbjct: 343 KEILELIEKWESLWERMEELEAKANDPNRFN-NRGGHL-LKEEKERKRLTRKLPKVEEQL 400

Query: 445 FAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQRQREKKKVQSQVVVEQENV 504
            A   +WE E    FL   VPLL  + +     +   +EKQR + +KK+ ++     E  
Sbjct: 401 TAKVTAWEGEFGTPFLVHGVPLLERMAQIEAQWERHRQEKQRAKARKKLANKTSTVMEPP 460

Query: 505 FGSRPGSSNRRIPNRSLNGSFSNANPLNRRISM 537
           +GS   S       R  + + ++  P  +R   
Sbjct: 461 YGSTESSVPSTPSTRRNDRNITSNTPSLKRTPN 493

Length = 619

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 595
KOG4302660 consensus Microtubule-associated protein essential 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 99.92
KOG4302660 consensus Microtubule-associated protein essential 99.9
PRK04778569 septation ring formation regulator EzrA; Provision 95.29
KOG09961293 consensus Structural maintenance of chromosome pro 93.37
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 92.96
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 92.36
PHA02562562 46 endonuclease subunit; Provisional 91.77
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 89.77
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 89.04
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 88.7
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 84.35
KOG2129552 consensus Uncharacterized conserved protein H4 [Fu 84.15
TIGR00634563 recN DNA repair protein RecN. All proteins in this 83.7
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 82.81
KOG09941758 consensus Extracellular matrix glycoprotein Lamini 82.52
PHA02562562 46 endonuclease subunit; Provisional 81.78
PF10174 775 Cast: RIM-binding protein of the cytomatrix active 81.28
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 81.18
PRK11637428 AmiB activator; Provisional 80.84
KOG0995581 consensus Centromere-associated protein HEC1 [Cell 80.09
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=5.5e-109  Score=908.88  Aligned_cols=560  Identities=45%  Similarity=0.679  Sum_probs=506.1

Q ss_pred             cccccchHHHHHHHHHHHHhHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 007622           13 SALLETSCGYLLQELQMIWDEVGEDQFEREKVLLDLEQECLDVYRRKVDRANISRARLHQELAESEAEFTHLLLSLGERS   92 (595)
Q Consensus        13 ~~~~~~~c~~ll~eLq~IWdEIG~~e~eR~~~l~~leqe~l~vy~~kV~e~~~~k~~L~q~Ia~~~~El~~L~~eLge~~   92 (595)
                      ++...+||++++.+|+.|||+||+++++|++++..|+++|+++|+++|+++...+++|+++|+.+++|++.||++||+++
T Consensus         9 ~~~~~~t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~~kve~a~~~~~~L~~~ia~~eael~~l~s~l~~~~   88 (660)
T KOG4302|consen    9 SLQIEATCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYKRKVEEASESKARLLQEIAVIEAELNDLCSALGEPS   88 (660)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            45568999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCHHHHHHH
Q 007622           93 LPGR-PEKMTGTLKEQLDSITPALREMRLRKEERVNQFRAVQAQIQKISAEIAGLSEYDDSSTNVIVNENDLSLKKLEEY  171 (595)
Q Consensus        93 ~~~~-~~~~~~tL~eql~~l~~~LE~Lrk~K~eR~~ef~~l~~qi~~lc~eL~~~~~~~~~~~~~~vd~~dlS~~~L~~l  171 (595)
                      +.+. +++..+||++++..|.+.++.|+++|++|+++|.++..||+.||.+|+|.  +. .+..+.+|+.|||+++|++|
T Consensus        89 ~~~~~~~k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~~qie~l~~~l~g~--~~-~~~~~~~D~~dlsl~kLeel  165 (660)
T KOG4302|consen   89 IIGEISDKIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELYHQIEKLCEELGGP--ED-LPSFLIADESDLSLEKLEEL  165 (660)
T ss_pred             cccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cc-CCcccccCcccccHHHHHHH
Confidence            7643 66788999999999999999999999999999999999999999999987  11 12234578899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhccCccccccc-cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 007622          172 QIELQGLHNEKNDRLQRVEKYIDAVRSLSATLGMESSMIITKVHPSLSELFG-ISKNISDNILAKLNSTVESLEEEKKKR  250 (595)
Q Consensus       172 ~~~L~~Lq~EK~~Rl~kv~~l~~~I~~L~~~Lg~d~~~~~~evh~sl~~~~~-~~~~lS~~~L~~L~~~~~~L~e~K~~R  250 (595)
                      +.+|.+|++||..|+++|.+++.+|+.||++||++|..++.+|||++.+..+ ++++||+++|++|..++..|+++|.+|
T Consensus       166 r~~L~~L~~ek~~Rlekv~~~~~~I~~l~~~Lg~~~~~~vt~~~~sL~~~~~~~~~~is~etl~~L~~~v~~l~~~k~qr  245 (660)
T KOG4302|consen  166 REHLNELQKEKSDRLEKVLELKEEIKSLCSVLGLDFSMTVTDVEPSLVDHDGEQSRSISDETLDRLDKMVKKLKEEKKQR  245 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhhhhhccCcccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999988766 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCChhHHhhHHHHhhhcccCccccCCCCCCcHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 007622          251 LEKLHQLGKALTNLWNLMGTPYNDRRKFSHVTSLLSVSSAEVSEPGSLTHNIIEQAEAEVKRLDQLKASKMQELFLKKQK  330 (595)
Q Consensus       251 ~~kl~~L~~~L~~LW~~L~~p~eer~~F~~~~~~i~~s~~e~~~~~~LS~~~I~~~e~Ev~RLe~lK~~~mkelI~k~r~  330 (595)
                      ++++++|+.+|.+|||+|++|++||..|.+++      ++|+|.+++||.++|.+++.||.||++||+++||+||+++|.
T Consensus       246 ~~kl~~l~~~~~~LWn~l~ts~Ee~~~f~~~t------~~e~t~~~~ls~d~I~~ve~Ev~Rl~qlK~s~mKeli~k~r~  319 (660)
T KOG4302|consen  246 LQKLQDLRTKLLELWNLLDTSDEERQRFVHVT------ESEATEPNSLSLDIIEQVEKEVDRLEQLKASNMKELIEKKRS  319 (660)
T ss_pred             HHHHHHHHHHHHHHHHhccCCHHHHHHHcccc------HHHhhccccccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999986      899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcchhhHHHHHhhhccCCCCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhHHHHHHHHcCC
Q 007622          331 ELEDICNNSHMEIPSQSKMDKITSLLNSGEIDHADLLTSMDEQISRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMD  410 (595)
Q Consensus       331 eL~elw~~~~~~~~~~~~~~~~~~~~~s~~~d~eelL~~~E~eI~~lk~~~~~~k~Ile~vekw~~~~~Ee~wLE~~~~D  410 (595)
                      ||++||+.+||+.+......++..++++|..|+.++|+.++.+|.++|+++.+||+|+++|++|+++|+++.||++|++|
T Consensus       320 Eleel~~~~h~s~~~e~~~~f~~~~~ds~~~d~~ell~~~d~~i~k~keea~srk~il~~ve~W~sa~EeE~~lee~n~D  399 (660)
T KOG4302|consen  320 ELEELWRLLHYSEENESRRRFITYLIDSGTEDVLELLENIDNLIKKYKEEALSRKEILERVEKWESACEEESWLEEYNRD  399 (660)
T ss_pred             HHHHHHHHHhccccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccch
Confidence            99999999999995445555577788999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCchhhhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHcCCeeEEcCccHHHHHHHHHHHHHhHHHHHHHHHHH
Q 007622          411 ENRYSVSRGAHRNLRRAERARVTVKKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQRQREK  490 (595)
Q Consensus       411 ~nR~~~~RG~h~~LlreEK~Rk~i~KlPkl~~~L~~~l~~wE~e~g~~Fl~dG~~ll~~l~e~~~~r~eKE~ek~r~r~~  490 (595)
                      .|||++|||||++|+||||+|++|+|||+|++.|+.++.+||.++|+||+|||+||++|+++|..||++||++|+|+|++
T Consensus       400 ~nR~~~~Rg~h~lLkreekar~~vsKlP~~~~~L~~k~~~wE~e~~~~FL~~g~~ll~m~~e~~~~r~~ke~~k~r~rd~  479 (660)
T KOG4302|consen  400 SNRYNAGRGAHLLLKREEKARKLVSKLPKMVEALTAKVTAWEEEKGRPFLVDGVPLLEMLEEYEEHRQEKEQEKARQRDQ  479 (660)
T ss_pred             hhhHhccccchhHHHHHHHHHHHhhhCchhhHHHHHHHHHHHHhcCCceeecCccHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhhhhcccCCCCCCCC----CCCCCCCCC-CCCCCCCCCCCcccccccccCcCCCCccccCccccccchhhhh
Q 007622          491 KKVQSQVVVEQENVFGSRPGSSN----RRIPNRSLN-GSFSNANPLNRRISMGIQQLGTYSINSATQGISFIKEGRKVQE  565 (595)
Q Consensus       491 kk~q~~~~~e~e~~~gs~p~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  565 (595)
                      |+.|+|+.++++..|||+|+|++    +++.+.+.+ +..++++|..|+++.|.....+.+   .....|    +++..+
T Consensus       480 kk~s~q~~~~~~~~~~sk~sp~~p~s~rk~~~~~t~~~~~~~~~ps~~~~s~~~~~~s~~~---~~~~~s----~r~~~~  552 (660)
T KOG4302|consen  480 KKTSGQLKPEQEGRYGSKPSPSKPNSPRKNRGRSTPPNGSLSKTPSKRPLSGGNSAASTQN---RTTPLS----PRRLRA  552 (660)
T ss_pred             cccccccCccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCccCcCCCCCCCCCccc---CCCCCC----cccccC
Confidence            99999999999999999999844    222333332 122346777777776654433322   111111    255555


Q ss_pred             ccccCCCccccccCccccccccc
Q 007622          566 QKKFARFGHASHFRDETASVVST  588 (595)
Q Consensus       566 ~~~~~~~~~~~~~~~~~~~~~~~  588 (595)
                      .+..|.||++..+.+..++-.++
T Consensus       553 ~st~p~n~~~~~~~~~l~s~~~~  575 (660)
T KOG4302|consen  553 SSTTPANKVARQKIESLNSNNSS  575 (660)
T ss_pred             CCCCCchhhhcccccccccCCCC
Confidence            66779999999999988764433

>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] Back     alignment and domain information
>TIGR00634 recN DNA repair protein RecN Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query595
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 7e-28
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 6e-05
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Length = 130 Back     alignment and structure
 Score =  107 bits (269), Expect = 7e-28
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 375 SRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTV 434
           +  K      K + E V++W          E  + D NR++   G   NL + E+ R  +
Sbjct: 3   AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGG---NLLKEEKQRAKL 59

Query: 435 -KKIPALVDSLFAMTKSWEEERKKVFLYDEVPLLAMLEEYNMARQEREEEKQRQREKKKV 493
            K +P L + L A  + WE+E  K F+ +    +  + E     +    EK+R ++++++
Sbjct: 60  QKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQ---WEMHRLEKERAKQERQL 116

Query: 494 QSQVVVEQENVFGS 507
           +++   E E ++GS
Sbjct: 117 KNKKQTETEMLYGS 130
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query595
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 100.0
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 82.98
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Back     alignment and structure
Probab=100.00  E-value=5.8e-38  Score=283.58  Aligned_cols=126  Identities=30%  Similarity=0.477  Sum_probs=113.1

Q ss_pred             HHHHHHHhhchHHHHHHHHHHHHhhHHHHHHHHcCCccccccccCchhhhHHHHHHHHhhhh-hhHHHHHHHHHHHHHHH
Q 007622          375 SRAKEEASSRKVIMEKVERWMLARDEERWLEEYSMDENRYSVSRGAHRNLRRAERARVTVKK-IPALVDSLFAMTKSWEE  453 (595)
Q Consensus       375 ~~lk~~~~~~k~Ile~vekw~~~~~Ee~wLE~~~~D~nR~~~~RG~h~~LlreEK~Rk~i~K-lPkl~~~L~~~l~~wE~  453 (595)
                      ++|+++|++|++||++|++|..+|.+...||+|++|||||+| |||  +|++|||+|++|+| ||+|++.|+++|.+||.
T Consensus         3 ~rLk~~y~~~k~Ile~vekweelw~~~~eLE~~~~D~sR~~~-Rgg--~LlreEK~Rk~i~k~lP~l~~~L~~~i~~wE~   79 (130)
T 3nrx_A            3 AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTN-RGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQ   79 (130)
T ss_dssp             CHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhc-cch--hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            579999999999999999997777777779999999999998 999  99999999999999 99999999999999999


Q ss_pred             HcCCeeEEcCccHHHHHHH-HHHHHHhHHHHHHHHHHHHhhhhhhhhhhhcccCC
Q 007622          454 ERKKVFLYDEVPLLAMLEE-YNMARQEREEEKQRQREKKKVQSQVVVEQENVFGS  507 (595)
Q Consensus       454 e~g~~Fl~dG~~ll~~l~e-~~~~r~eKE~ek~r~r~~kk~q~~~~~e~e~~~gs  507 (595)
                      ++|.||+|||++|+++|++ |+.+|++||+||++ |++||.   +.+|+||+|||
T Consensus        80 e~g~~Flv~G~~~le~l~eqw~~~r~~KE~eK~~-R~~kk~---~~~e~e~~~gs  130 (130)
T 3nrx_A           80 EHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQE-RQLKNK---KQTETEMLYGS  130 (130)
T ss_dssp             HHTSCCEETTEEHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHHCC
T ss_pred             HcCCeeeEcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHhccCC
Confidence            9999999999999999988 99999999999999 555554   44799999998
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00