Citrus Sinensis ID: 007822

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------59
MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEEKRRMRESKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPRTNGGVNGTPSRRLSLNAHQNGSRSTTKEGKRESTGSIRPAAPVNYVAISKEDSASHVSVSDAVPASP
cccccccccccHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccc
mavtdtenpllgetTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGeksiaglgipektsgTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEiagnlslgdqapsvdesdltLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVtevhpslndstgvqsksisNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLwnlmdtpseerrlfdhvtcnisayvdgvtvpgALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLidsgnvepaeLLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEeswledynrdenrynasrgahlnLKRAEKARILVNKIPALVETLVAKTRAWeedhgisftydgvpLLAMLDEYAMLRQEREEEKRRMRESKKfheqqsseqesifgsrpsparpagpkkvvgprtnggvngtpsrrlslnahqngsrsttkegkrestgsirpaapvnyvaiskedsashvsvsdavpasp
mavtdtenpllgetTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHpslndstgvqsksisndTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRynasrgahlnlkraeKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEEKRRMREskkfheqqsseqesifgsrpsparpagpkkvvgprtnggvngtpsrrlslnahqngsrsttkegkrestgsirpaapvNYVAISKedsashvsvsdavpasp
MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLrqereeekrrmreSKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPRTNGGVNGTPSRRLSLNAHQNGSRSTTKEGKRESTGSIRPAAPVNYVAISKEdsashvsvsdavpasp
*************TTCSSLLHKLQEIWDEVG*******KMLLQIEKECLDVYKRKVEQAA**RAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQ*******FSDVQSQIQKICGEIAGNL************************************LHKVLEFVSTVHDLCGVLGMDFFSTVTEVH******************LARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNV**************************LDKVEKWMSACEEESWLEDYNR****YN**RGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAML*******************************************************************************************************************
*************TTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVE*******************************************TIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLS***********DLTLKKLDEYQAQLQE***E*SDRLHKVLEFVSTVHDLCGVLGMDFF********************ISNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVT******************DLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLE**********************************LVETLVAKTRAWEEDHGISFTYDGVPLLAMLD************************************************************************************************************************
*********LLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIA*********KEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQE******************************************GPRTNGGVNGTPSRRLSL*********************IRPAAPVNYVAISK*****************
*********LLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAG*******SGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGN******APSVDESDLTLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLND*****SKSISNDTLARLAKTVLALKEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEEKRRMRESKKFHEQQSSEQESIF**************************************************************************************
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MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECxxxxxxxxxxxxxxxxxxxxxxxxxxxxLASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDExxxxxxxxxxxxxxxxxxxxxxxxxxxxVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLALxxxxxxxxxxxxxxxxxxxxxWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLxxxxxxxxxxxxxxxxxxxxxIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSSEQESIFGSRPSPARPAGPKKVVGPRTNGGVNGTPSRRLSLNAHQNGSRSTTKEGKRESTGSIRPAAPVNYVAISKEDSASHVSVSDAVPASP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query588 2.2.26 [Sep-21-2011]
Q9FLP0587 65-kDa microtubule-associ yes no 0.988 0.989 0.791 0.0
Q8LEG3578 65-kDa microtubule-associ no no 0.981 0.998 0.747 0.0
Q8L836603 65-kDa microtubule-associ no no 0.960 0.936 0.482 1e-151
Q9SIS3608 65-kDa microtubule-associ no no 0.954 0.922 0.461 1e-146
Q9ZVJ3550 65-kDa microtubule-associ no no 0.913 0.976 0.479 1e-137
Q9FHM4 707 65-kDa microtubule-associ no no 0.925 0.769 0.484 1e-133
Q9C7G0562 65-kDa microtubule-associ no no 0.916 0.959 0.471 1e-131
Q9LZY0677 65-kDa microtubule-associ no no 0.877 0.762 0.449 1e-123
Q4PSA3549 65-kDa microtubule-associ no no 0.869 0.930 0.438 1e-102
Q99K43603 Protein regulator of cyto yes no 0.812 0.792 0.252 7e-20
>sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1 Back     alignment and function desciption
 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/594 (79%), Positives = 528/594 (88%), Gaps = 13/594 (2%)

Query: 1   MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAA 60
           MAVTDTE+P LGE TC +LL KLQEIWDEVGE+D+ERDK+LLQIE+ECLDVYKRKVEQAA
Sbjct: 1   MAVTDTESPHLGEITCGTLLEKLQEIWDEVGESDDERDKLLLQIEQECLDVYKRKVEQAA 60

Query: 61  KSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQK 120
           KSRA+LLQ LSDA  EL+SL  +LG+KS+  +GIP+K+SGTIKEQLAAIAPALEQLW+QK
Sbjct: 61  KSRAELLQTLSDANAELSSLTMSLGDKSL--VGIPDKSSGTIKEQLAAIAPALEQLWQQK 118

Query: 121 EERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSD 180
           EERV+EFSDVQSQIQKICG+IAG LS  ++ P VDESDL+LKKLD++Q+QLQELQKEKSD
Sbjct: 119 EERVREFSDVQSQIQKICGDIAGGLS--NEVPIVDESDLSLKKLDDFQSQLQELQKEKSD 176

Query: 181 RLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLAL 240
           RL KVLEFVSTVHDLC VLG+DF STVTEVHPSL++ T VQSKSISN+TL+RLAKTVL L
Sbjct: 177 RLRKVLEFVSTVHDLCAVLGLDFLSTVTEVHPSLDEDTSVQSKSISNETLSRLAKTVLTL 236

Query: 241 KEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLI 300
           K+DKKQRL KLQELATQLIDLWNLMDTP EER LFDHVTCNIS+ VD VTVPGALA DLI
Sbjct: 237 KDDKKQRLQKLQELATQLIDLWNLMDTPDEERELFDHVTCNISSSVDEVTVPGALARDLI 296

Query: 301 EQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEP 360
           EQAEVEV+RLDQLKASRMKEIAFK+Q ELEEI+ARAH+E++P +ARE+IM+LIDSGNVEP
Sbjct: 297 EQAEVEVDRLDQLKASRMKEIAFKKQSELEEIYARAHVEVNPESARERIMSLIDSGNVEP 356

Query: 361 AELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLN 420
            ELLADMD+QI+KAKEEA SRK+ILD+VEKWMSACEEESWLEDYNRD+NRY+ASRGAHLN
Sbjct: 357 TELLADMDSQISKAKEEAFSRKDILDRVEKWMSACEEESWLEDYNRDQNRYSASRGAHLN 416

Query: 421 LKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEE 480
           LKRAEKARILV+KIPA+V+TLVAKTRAWEE+H +SF YDGVPLLAMLDEY MLRQEREEE
Sbjct: 417 LKRAEKARILVSKIPAMVDTLVAKTRAWEEEHSMSFAYDGVPLLAMLDEYGMLRQEREEE 476

Query: 481 KRRMRESKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPR-TNGGVNGTPSRRLSLNAH 539
           KRR+RE KK  EQ   EQES F +RPSPARP   KK VGPR  NGG NGT +RRLSLNA+
Sbjct: 477 KRRLREQKKVQEQPHVEQESAFSTRPSPARPVSAKKTVGPRANNGGANGTHNRRLSLNAN 536

Query: 540 QNGSRSTTKE-GKRESTGSIRPAAPVNYVAISKEDSASHVSVSDA----VPASP 588
           QNGSRST KE G+RE+    RPAAP NYVAISKE++AS   VS A    VPASP
Sbjct: 537 QNGSRSTAKEAGRRETLN--RPAAPTNYVAISKEEAASS-PVSGAADHQVPASP 587
Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Enhances MT nucleation. Can also bind to tubulin dimers and promotes their polymerization. Confers MT resistance to the drug propyzamide and cold conditions. Plays a role in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. Represses metaphase spindle organization and the transition to anaphase in dephosphorylated active form. Promotes the formation of a planar network of antiparallel microtubules. May be involved in stomatal movement modulation by regulating the dynamic and arrangement of cortical MT.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8LEG3|MA652_ARATH 65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana GN=MAP65-2 PE=1 SV=1 Back     alignment and function description
>sp|Q8L836|MA657_ARATH 65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana GN=MAP65-7 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIS3|MA656_ARATH 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana GN=MAP65-6 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZVJ3|MA655_ARATH 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2 Back     alignment and function description
>sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1 Back     alignment and function description
>sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZY0|MA654_ARATH 65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2 Back     alignment and function description
>sp|Q4PSA3|MA659_ARATH 65-kDa microtubule-associated protein 9 OS=Arabidopsis thaliana GN=MAP65-9 PE=2 SV=1 Back     alignment and function description
>sp|Q99K43|PRC1_MOUSE Protein regulator of cytokinesis 1 OS=Mus musculus GN=Prc1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query588
359494079582 PREDICTED: LOW QUALITY PROTEIN: 65-kDa m 0.989 1.0 0.855 0.0
356552809582 PREDICTED: 65-kDa microtubule-associated 0.989 1.0 0.852 0.0
356552811590 PREDICTED: 65-kDa microtubule-associated 0.989 0.986 0.852 0.0
255580760583 Protein regulator of cytokinesis, putati 0.991 1.0 0.860 0.0
356501572582 PREDICTED: 65-kDa microtubule-associated 0.989 1.0 0.846 0.0
147781093623 hypothetical protein VITISV_007561 [Viti 0.962 0.908 0.851 0.0
224114485581 predicted protein [Populus trichocarpa] 0.988 1.0 0.829 0.0
224056361581 predicted protein [Populus trichocarpa] 0.988 1.0 0.840 0.0
357494709582 Microtubule-associated protein MAP65-1a 0.988 0.998 0.830 0.0
356553539627 PREDICTED: LOW QUALITY PROTEIN: 65-kDa m 0.989 0.928 0.828 0.0
>gi|359494079|ref|XP_002277391.2| PREDICTED: LOW QUALITY PROTEIN: 65-kDa microtubule-associated protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1028 bits (2657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/588 (85%), Positives = 543/588 (92%), Gaps = 6/588 (1%)

Query: 1   MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAA 60
           MAV D E PLLGETTC SLL KLQ+IWDEVGE+DEERDKMLLQ+E+ECLDVYKRKV+QA 
Sbjct: 1   MAVADAEIPLLGETTCGSLLQKLQQIWDEVGESDEERDKMLLQLEQECLDVYKRKVDQAV 60

Query: 61  KSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQK 120
           KSRA LLQAL+DA++EL+ LLSALGEKS   +GIP+KTSGTIKEQLAAIAP LEQLWKQK
Sbjct: 61  KSRAHLLQALADAQLELSRLLSALGEKSF--VGIPDKTSGTIKEQLAAIAPTLEQLWKQK 118

Query: 121 EERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSD 180
           EERVKEFSDVQ+QIQKICGEIAGN +L  + P VDE+DL+LKKLDE+Q QLQELQKEKSD
Sbjct: 119 EERVKEFSDVQTQIQKICGEIAGNSNLS-EVPVVDEADLSLKKLDEFQGQLQELQKEKSD 177

Query: 181 RLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLAL 240
           RLHKVLEFVSTVHDLC VLGMDFF+TVTEVHPSLNDSTGVQSKSISNDTL+RLAKTVLAL
Sbjct: 178 RLHKVLEFVSTVHDLCAVLGMDFFNTVTEVHPSLNDSTGVQSKSISNDTLSRLAKTVLAL 237

Query: 241 KEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLI 300
           KEDKKQRL KLQELATQLIDLWNLMDTP EER LFDHVTCNISA VD VT+PGALALDLI
Sbjct: 238 KEDKKQRLQKLQELATQLIDLWNLMDTPEEERSLFDHVTCNISASVDEVTIPGALALDLI 297

Query: 301 EQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEP 360
           EQAEVEVERLDQLKASRMKEIAFKRQ ELEEIFARAHIEIDP AAR KIM+LIDSG+VEP
Sbjct: 298 EQAEVEVERLDQLKASRMKEIAFKRQAELEEIFARAHIEIDPEAARAKIMSLIDSGDVEP 357

Query: 361 AELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLN 420
           +ELLADMDNQI KAKEEA SRK+ILDKVEKWMSACEEESWLEDYNRDENRYN+SRGAHLN
Sbjct: 358 SELLADMDNQITKAKEEAFSRKDILDKVEKWMSACEEESWLEDYNRDENRYNSSRGAHLN 417

Query: 421 LKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEE 480
           LKRAEKARILVNKIPALV+TLVAKT AWEEDHGI FTYDGVPLLAMLDEYAMLR +REEE
Sbjct: 418 LKRAEKARILVNKIPALVDTLVAKTGAWEEDHGIPFTYDGVPLLAMLDEYAMLRHDREEE 477

Query: 481 KRRMRESKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPRTNGGVNGTPSRRLSLNAHQ 540
           KRRMR+ KKFHE  ++EQE+IFGSRPSP RP GPKKVVGPR NGG NGTPSRRLSLNA+Q
Sbjct: 478 KRRMRDQKKFHELLNTEQEAIFGSRPSPGRPLGPKKVVGPRANGGANGTPSRRLSLNANQ 537

Query: 541 NGSRSTTKEGKRESTGSIRPAAPVNYVAISKEDSASHVSVSDAVPASP 588
           NG+RST+K+GKR++T   RP APVNYVAISKED+ASHVS ++ VPASP
Sbjct: 538 NGARSTSKDGKRDNT---RPVAPVNYVAISKEDAASHVSGTEPVPASP 582

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356552809|ref|XP_003544755.1| PREDICTED: 65-kDa microtubule-associated protein 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356552811|ref|XP_003544756.1| PREDICTED: 65-kDa microtubule-associated protein 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|255580760|ref|XP_002531201.1| Protein regulator of cytokinesis, putative [Ricinus communis] gi|223529203|gb|EEF31178.1| Protein regulator of cytokinesis, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356501572|ref|XP_003519598.1| PREDICTED: 65-kDa microtubule-associated protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|147781093|emb|CAN73840.1| hypothetical protein VITISV_007561 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224114485|ref|XP_002316774.1| predicted protein [Populus trichocarpa] gi|222859839|gb|EEE97386.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224056361|ref|XP_002298820.1| predicted protein [Populus trichocarpa] gi|222846078|gb|EEE83625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357494709|ref|XP_003617643.1| Microtubule-associated protein MAP65-1a [Medicago truncatula] gi|355518978|gb|AET00602.1| Microtubule-associated protein MAP65-1a [Medicago truncatula] Back     alignment and taxonomy information
>gi|356553539|ref|XP_003545112.1| PREDICTED: LOW QUALITY PROTEIN: 65-kDa microtubule-associated protein 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query588
TAIR|locus:2116267578 MAP65-2 "AT4G26760" [Arabidops 0.954 0.970 0.732 1.1e-213
TAIR|locus:2153152 707 PLE "AT5G51600" [Arabidopsis t 0.925 0.769 0.466 3.3e-132
TAIR|locus:2059713608 ATMAP65-6 [Arabidopsis thalian 0.948 0.917 0.464 8.1e-131
TAIR|locus:2006737603 MAP65-7 "AT1G14690" [Arabidops 0.945 0.922 0.471 1.3e-130
TAIR|locus:2167978549 MAP65-9 "microtubule-associate 0.901 0.965 0.421 9.2e-107
MGI|MGI:1858961603 Prc1 "protein regulator of cyt 0.408 0.398 0.266 1.7e-21
UNIPROTKB|F1P6J7621 PRC1 "Uncharacterized protein" 0.370 0.351 0.256 1.4e-20
RGD|1311754606 Prc1 "protein regulator of cyt 0.404 0.392 0.252 4.4e-18
ZFIN|ZDB-GENE-040426-777606 prc1b "protein regulator of cy 0.321 0.311 0.255 6.5e-17
UNIPROTKB|F1MRT3605 PRC1 "Uncharacterized protein" 0.403 0.391 0.231 1.1e-16
TAIR|locus:2116267 MAP65-2 "AT4G26760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2065 (732.0 bits), Expect = 1.1e-213, P = 1.1e-213
 Identities = 420/573 (73%), Positives = 480/573 (83%)

Query:     1 MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAA 60
             MAVT+ ENPLLGE TC +LL KLQEIWDEVGE+DEERDK+LLQIE+ECL+VYK+KVE AA
Sbjct:     1 MAVTEAENPLLGEITCGTLLQKLQEIWDEVGESDEERDKLLLQIEEECLNVYKKKVELAA 60

Query:    61 KSRAQLLQALSDAKIELASLLSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQK 120
             KSRA+LLQ LSDA +EL++L +ALGEKS   + IP+KTSGTIKEQL+AIAPALEQLW+QK
Sbjct:    61 KSRAELLQTLSDATVELSNLTTALGEKSY--IDIPDKTSGTIKEQLSAIAPALEQLWQQK 118

Query:   121 EERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLTLKKLDEYQAQLQELQKEKSD 180
             EERV+ FSDVQSQIQKIC EIAG L+ G     VDE+DL+LK+LD++Q +LQELQKEKSD
Sbjct:   119 EERVRAFSDVQSQIQKICEEIAGGLNNGPHV--VDETDLSLKRLDDFQRKLQELQKEKSD 176

Query:   181 RLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLAL 240
             RL KVLEFVSTVHDLC VL +DF STVTEVHPSL+++ GVQ+KSISN+TLARLAKTVL L
Sbjct:   177 RLQKVLEFVSTVHDLCAVLRLDFLSTVTEVHPSLDEANGVQTKSISNETLARLAKTVLTL 236

Query:   241 KEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLI 300
             KEDK QRL KLQELATQL DLWNLMDT  EER LFDHVT NISA V  VT  GALALDLI
Sbjct:   237 KEDKMQRLKKLQELATQLTDLWNLMDTSDEERELFDHVTSNISASVHEVTASGALALDLI 296

Query:   301 EQAEVEVERLDQLKASRMKEIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEP 360
             EQAEVEV+RLDQLK+SRMKEIAFK+Q ELEEI+ARAHIEI P   RE+IM+LID+GN EP
Sbjct:   297 EQAEVEVDRLDQLKSSRMKEIAFKKQSELEEIYARAHIEIKPEVVRERIMSLIDAGNTEP 356

Query:   361 AELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLN 420
              ELLADMD+QIAKAKEEA SRKEILD+VEKWMSACEEESWLEDYNRD+NRY+ASRGAHLN
Sbjct:   357 TELLADMDSQIAKAKEEAFSRKEILDRVEKWMSACEEESWLEDYNRDQNRYSASRGAHLN 416

Query:   421 LKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLXXXXXXX 480
             LKRAEKARILV+KI A+V+TL+AKTRAWEE++ +SF YDGVPLLAMLDEY ML       
Sbjct:   417 LKRAEKARILVSKITAMVDTLIAKTRAWEEENSMSFEYDGVPLLAMLDEYTMLRQEREDE 476

Query:   481 XXXXXXSKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPRTNGG-VNGTPSRRLSLNAH 539
                    KK  EQ  ++QES FGS+PSPARP   KK VG R NGG +N TP RRLS+N++
Sbjct:   477 KRRLKEQKKQQEQPHTDQESAFGSKPSPARPVSAKKPVGTRVNGGGLNETPMRRLSMNSN 536

Query:   540 QNGSRSTTKEGKRESTGSIRPAAPVNYVAISKE 572
             QNGS+S     KR+S   I  A+P N VA +K+
Sbjct:   537 QNGSKS-----KRDSLNKI--ASPSNIVANTKD 562
GO:0003674 "molecular_function" evidence=ND
GO:0009524 "phragmoplast" evidence=IDA
GO:0009574 "preprophase band" evidence=IDA
GO:0055028 "cortical microtubule" evidence=IDA
GO:0000910 "cytokinesis" evidence=IGI
GO:0005819 "spindle" evidence=IDA
GO:0005874 "microtubule" evidence=IDA
GO:0008283 "cell proliferation" evidence=IGI;RCA
GO:0048528 "post-embryonic root development" evidence=IGI
GO:0072686 "mitotic spindle" evidence=IDA
GO:0051302 "regulation of cell division" evidence=IGI
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000278 "mitotic cell cycle" evidence=RCA
GO:0000280 "nuclear division" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0006275 "regulation of DNA replication" evidence=RCA
GO:0007000 "nucleolus organization" evidence=RCA
GO:0007067 "mitosis" evidence=RCA
GO:0007129 "synapsis" evidence=RCA
GO:0007131 "reciprocal meiotic recombination" evidence=RCA
GO:0009909 "regulation of flower development" evidence=RCA
GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA
GO:0010564 "regulation of cell cycle process" evidence=RCA
GO:0016458 "gene silencing" evidence=RCA
GO:0016572 "histone phosphorylation" evidence=RCA
GO:0034968 "histone lysine methylation" evidence=RCA
GO:0042023 "DNA endoreduplication" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0051225 "spindle assembly" evidence=RCA
GO:0051258 "protein polymerization" evidence=RCA
TAIR|locus:2153152 PLE "AT5G51600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059713 ATMAP65-6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006737 MAP65-7 "AT1G14690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167978 MAP65-9 "microtubule-associated protein 65-9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1858961 Prc1 "protein regulator of cytokinesis 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P6J7 PRC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1311754 Prc1 "protein regulator of cytokinesis 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-777 prc1b "protein regulator of cytokinesis 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MRT3 PRC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLP0MA651_ARATHNo assigned EC number0.79120.98800.9897yesno
Q8LEG3MA652_ARATHNo assigned EC number0.74700.98120.9982nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query588
pfam03999619 pfam03999, MAP65_ASE1, Microtubule associated prot 1e-63
>gnl|CDD|217835 pfam03999, MAP65_ASE1, Microtubule associated protein (MAP65/ASE1 family) Back     alignment and domain information 
 Score =  220 bits (561), Expect = 1e-63
 Identities = 141/546 (25%), Positives = 239/546 (43%), Gaps = 42/546 (7%)

Query: 36  ERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASLLSALGEKSIAGLGIP 95
            ++  L  I+       K   E+++  +  +L+ ++  + E+  L +  G +      + 
Sbjct: 1   LQNLNLADIKIHYSSFEKDLKEESSTKKQAILKDIAVLRAEIKRLSAENGIEQDISNSLL 60

Query: 96  EKTSGTIKEQLAAIAPA---------------LEQLWKQKEERVKEFSDVQSQIQKICGE 140
            K    +  +   +                  LE L KQK ER  E  ++  Q+ ++C E
Sbjct: 61  HKEPLQLLSEKDILQRPKSFPLGVWLLKLRDQLESLRKQKAERRAEIKELLHQLLQLCNE 120

Query: 141 IAGNLSLGDQAPSVDESDL-TLKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVL 199
           + G   L       D   L  L++L+ ++ +L EL++EK  RL +V     ++  LC +L
Sbjct: 121 L-GEPPLSLLRKDADPLSLPNLEELEHFRERLGELREEKVRRLEEVDSLKQSIKSLCSLL 179

Query: 200 GMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLALKEDKKQRLHKLQELATQLI 259
           G     T  E    L+         ++ +T+ +L K +  L   KKQR  K+ +L  Q+ 
Sbjct: 180 GTPPARTDFE-QDVLSYGEIPNDHCVTRETIDKLDKMLENLAAQKKQRADKIDDLREQIQ 238

Query: 260 DLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMK 319
           +LWN +    EE++ F      +S            ++  +E+   EVERL+ LK   +K
Sbjct: 239 ELWNRLQISDEEQKRFVREATILSQE----------SIKRLEE---EVERLEALKKQNLK 285

Query: 320 EIAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAH 379
           +     + E++E++       +    R+      +    E  +LL   +N+I + KEE  
Sbjct: 286 KFIEDLRIEIQELWDLLFYSEE---QRKSFTPYYEELYTE--QLLEQHENEIKRLKEEYS 340

Query: 380 SRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVE 439
           S KEIL+ +EKW S  E    LE    D NR+N +RG HL LK  ++ + L  K+P + E
Sbjct: 341 SNKEILELIEKWESLWERMEELEAKANDPNRFN-NRGGHL-LKEEKERKRLTRKLPKVEE 398

Query: 440 TLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEEKRRMRESKKFHEQQSSEQE 499
            L AK  AWE + G  F   GVPLL  + +     +   +EK+R +  KK   + S+  E
Sbjct: 399 QLTAKVTAWEGEFGTPFLVHGVPLLERMAQIEAQWERHRQEKQRAKARKKLANKTSTVME 458

Query: 500 SIFGSRPSPARPAGPKKVVGPRTNGGVNGTPSRRLSLNAHQNGSRSTTKEGKRESTGSIR 559
             +GS  S   P+ P      R       TPS + + N  ++ S S       +STG+  
Sbjct: 459 PPYGSTESSV-PSTPSTRRNDRNITS--NTPSLKRTPNLTKS-SLSQEASLISKSTGNTH 514

Query: 560 PAAPVN 565
             +   
Sbjct: 515 KHSTPR 520

Length = 619

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 588
KOG4302660 consensus Microtubule-associated protein essential 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 100.0
PF03999619 MAP65_ASE1: Microtubule associated protein (MAP65/ 99.91
KOG4302 660 consensus Microtubule-associated protein essential 99.9
PF06160560 EzrA: Septation ring formation regulator, EzrA ; I 94.33
PRK04778569 septation ring formation regulator EzrA; Provision 94.17
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 92.68
PRK02224 880 chromosome segregation protein; Provisional 92.64
PF15070617 GOLGA2L5: Putative golgin subfamily A member 2-lik 91.32
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 90.57
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 90.52
KOG09331174 consensus Structural maintenance of chromosome pro 90.42
PHA02562562 46 endonuclease subunit; Provisional 89.51
KOG0250 1074 consensus DNA repair protein RAD18 (SMC family pro 89.41
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 88.54
KOG09331174 consensus Structural maintenance of chromosome pro 88.33
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 87.18
KOG4674 1822 consensus Uncharacterized conserved coiled-coil pr 86.95
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 86.82
KOG0612 1317 consensus Rho-associated, coiled-coil containing p 86.26
PHA02562562 46 endonuclease subunit; Provisional 85.27
PRK11637428 AmiB activator; Provisional 84.96
TIGR00634563 recN DNA repair protein RecN. All proteins in this 83.88
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 82.55
KOG09961293 consensus Structural maintenance of chromosome pro 80.89
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 80.49
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=7.3e-112  Score=928.74  Aligned_cols=567  Identities=53%  Similarity=0.781  Sum_probs=514.0

Q ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHhHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007822            1 MAVTDTENPLLGETTCSSLLHKLQEIWDEVGENDEERDKMLLQIEKECLDVYKRKVEQAAKSRAQLLQALSDAKIELASL   80 (588)
Q Consensus         1 ~~~~~~~~~~~~~~~c~~ll~eL~~IWdeIG~~e~er~~~l~~le~e~~~v~~~~V~e~~~~r~~L~q~I~~~~~El~~L   80 (588)
                      |+.++...+....+||++++.+|+.|||+||+++++|++++..|++||+++|+++|+++...+++|+++|++++++++.|
T Consensus         1 ~~~~~~~~~~~~~~t~~~~~~eL~~IW~~igE~~~e~d~~l~~le~e~~~~y~~kve~a~~~~~~L~~~ia~~eael~~l   80 (660)
T KOG4302|consen    1 TVMMDSEVSLQIEATCGNLLNELQKIWDEIGESETERDKKLLRLEQECLEIYKRKVEEASESKARLLQEIAVIEAELNDL   80 (660)
T ss_pred             CCccccchhhhhHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45555555666699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCCCCCCCCCCCCCCCCC
Q 007822           81 LSALGEKSIAGLGIPEKTSGTIKEQLAAIAPALEQLWKQKEERVKEFSDVQSQIQKICGEIAGNLSLGDQAPSVDESDLT  160 (588)
Q Consensus        81 ~~eLge~~~~~~~~~~~~~~tL~eql~~l~~~le~Lr~~K~eR~~ef~~l~~qI~~l~~eL~~~~~~~~~~~~v~~~dlS  160 (588)
                      |++||++++.+. .+++..+||++++..|.+.++.|+++|++|+++|.+++.||+.||.+|||...... ++.+|+.|||
T Consensus        81 ~s~l~~~~~~~~-~~~k~e~tLke~l~~l~~~le~lr~qk~eR~~ef~el~~qie~l~~~l~g~~~~~~-~~~~D~~dls  158 (660)
T KOG4302|consen   81 CSALGEPSIIGE-ISDKIEGTLKEQLESLKPYLEGLRKQKDERRAEFKELYHQIEKLCEELGGPEDLPS-FLIADESDLS  158 (660)
T ss_pred             HHHhCCcccccc-cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCc-ccccCccccc
Confidence            999999887641 24578889999999999999999999999999999999999999999999821111 3566889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccccccCCCCCCCCCccCCCCHHHHHHHHHHHHHH
Q 007822          161 LKKLDEYQAQLQELQKEKSDRLHKVLEFVSTVHDLCGVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLAL  240 (588)
Q Consensus       161 ~~~L~~l~~~L~~Lq~Ek~~R~~kv~~l~~~I~~L~~~Lgid~~~~v~evhpsl~d~~~~~~~~lS~~~L~~L~~~l~~L  240 (588)
                      +++|++|+.+|.+|++||..|+++|.+++.+|+.||.+||++|..+|.++||+|.+..+.++++||++||++|..++..|
T Consensus       159 l~kLeelr~~L~~L~~ek~~Rlekv~~~~~~I~~l~~~Lg~~~~~~vt~~~~sL~~~~~~~~~~is~etl~~L~~~v~~l  238 (660)
T KOG4302|consen  159 LEKLEELREHLNELQKEKSDRLEKVLELKEEIKSLCSVLGLDFSMTVTDVEPSLVDHDGEQSRSISDETLDRLDKMVKKL  238 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhhhhhccCcccccCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhHHHhhhcccccccCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 007822          241 KEDKKQRLHKLQELATQLIDLWNLMDTPSEERRLFDHVTCNISAYVDGVTVPGALALDLIEQAEVEVERLDQLKASRMKE  320 (588)
Q Consensus       241 ~e~K~~R~~ki~~l~~~l~~LW~~L~~p~eEr~~F~~~~~~i~~s~~e~~~~~~lS~~~I~~~e~Ev~RLe~lK~~~mke  320 (588)
                      +++|.+|++++++|+.+|.+|||+|++|++||..|.+++      ++|++.++++|.++|.+++.||.||++||+++||+
T Consensus       239 ~~~k~qr~~kl~~l~~~~~~LWn~l~ts~Ee~~~f~~~t------~~e~t~~~~ls~d~I~~ve~Ev~Rl~qlK~s~mKe  312 (660)
T KOG4302|consen  239 KEEKKQRLQKLQDLRTKLLELWNLLDTSDEERQRFVHVT------ESEATEPNSLSLDIIEQVEKEVDRLEQLKASNMKE  312 (660)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHcccc------HHHhhccccccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            999999999999999999999999999999999999986      78999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCCCcchHHHHHHhHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHH
Q 007822          321 IAFKRQGELEEIFARAHIEIDPVAAREKIMTLIDSGNVEPAELLADMDNQIAKAKEEAHSRKEILDKVEKWMSACEEESW  400 (588)
Q Consensus       321 li~k~r~eLeelw~~~~~~~e~r~~~~~~~~~i~s~~~~~e~lL~~~E~eI~~lke~~~~~k~Il~~vekw~~l~~ee~~  400 (588)
                      ||+++|.||++||+.+||+.+......+++.++++|..|+.++|+.++.+|.++|+++.+||+|+++|++|+++|+++.|
T Consensus       313 li~k~r~Eleel~~~~h~s~~~e~~~~f~~~~~ds~~~d~~ell~~~d~~i~k~keea~srk~il~~ve~W~sa~EeE~~  392 (660)
T KOG4302|consen  313 LIEKKRSELEELWRLLHYSEENESRRRFITYLIDSGTEDVLELLENIDNLIKKYKEEALSRKEILERVEKWESACEEESW  392 (660)
T ss_pred             HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            99999999999999999999433334446678899999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCchhhhccccchhhchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHcCCceEEcCccHHHHHHHHHHHHHHHHHH
Q 007822          401 LEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEE  480 (588)
Q Consensus       401 Le~~~~D~nR~~~~RG~~~~LlreEK~Rk~i~KlPkl~~~L~~~l~~wE~e~g~~Fl~dG~~ll~~l~e~~~~r~eKE~e  480 (588)
                      |++|++|.|||+++||||++|+||||+|++|+|||+|++.|+.++.+||.++|+||+|||++|++|+++|..||++||++
T Consensus       393 lee~n~D~nR~~~~Rg~h~lLkreekar~~vsKlP~~~~~L~~k~~~wE~e~~~~FL~~g~~ll~m~~e~~~~r~~ke~~  472 (660)
T KOG4302|consen  393 LEEYNRDSNRYNAGRGAHLLLKREEKARKLVSKLPKMVEALTAKVTAWEEEKGRPFLVDGVPLLEMLEEYEEHRQEKEQE  472 (660)
T ss_pred             HhcccchhhhHhccccchhHHHHHHHHHHHhhhCchhhHHHHHHHHHHHHhcCCceeecCccHHHHHHHHHHHHHHHHHH
Confidence            99999999999988999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhHHhhhhhhhhhhhhhcccCCCCCCCCCCCCCccCCCCCC--CCC-CCCCCCCccccccCCCCCCCccccCccccC-
Q 007822          481 KRRMRESKKFHEQQSSEQESIFGSRPSPARPAGPKKVVGPRTN--GGV-NGTPSRRLSLNAHQNGSRSTTKEGKRESTG-  556 (588)
Q Consensus       481 k~~~R~~kk~~~~~~~e~e~~~gs~psp~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  556 (588)
                      |+|+|++|+.++|+.++++..|||+|||.+|+|.||..|+++|  ++. .+|..|+.|.|.....+.+.....+  -++ 
T Consensus       473 k~r~rd~kk~s~q~~~~~~~~~~sk~sp~~p~s~rk~~~~~t~~~~~~~~~ps~~~~s~~~~~~s~~~~~~~~s--~r~~  550 (660)
T KOG4302|consen  473 KARQRDQKKTSGQLKPEQEGRYGSKPSPSKPNSPRKNRGRSTPPNGSLSKTPSKRPLSGGNSAASTQNRTTPLS--PRRL  550 (660)
T ss_pred             HHhcccccccccccCccccccccCCCCCCCCCccccCCCCCCCCCCCCCCCCccCcCCCCCCCCCcccCCCCCC--cccc
Confidence            9999999999999999999999999999999999999998875  444 4444444444333222222211111  122 


Q ss_pred             CCCCCCCCcccccccCCcccc
Q 007822          557 SIRPAAPVNYVAISKEDSASH  577 (588)
Q Consensus       557 ~~~~~~~~~~~~~~~~~~~~~  577 (588)
                      +..+++|.||++..+.++.++
T Consensus       551 ~~~st~p~n~~~~~~~~~l~s  571 (660)
T KOG4302|consen  551 RASSTTPANKVARQKIESLNS  571 (660)
T ss_pred             cCCCCCCchhhhccccccccc
Confidence            456778999999999988653

>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins Back     alignment and domain information
>KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>TIGR00634 recN DNA repair protein RecN Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query588
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 8e-37
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-04
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Length = 130 Back     alignment and structure
 Score =  132 bits (333), Expect = 8e-37
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 372 AKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILV 431
           A  K      KE+ + V+KW          E    D NR+    G   NL + EK R  +
Sbjct: 3   AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFTNRGG---NLLKEEKQRAKL 59

Query: 432 NK-IPALVETLVAKTRAWEEDHGISFTYDGVPLLAMLDEYAMLRQEREEEKRRMRESKKF 490
            K +P L E L A+   WE++H  +F  +G   +  + E     +    EK R ++ ++ 
Sbjct: 60  QKMLPKLEEELKARIELWEQEHSKAFMVNGQKFMEYVAEQ---WEMHRLEKERAKQERQL 116

Query: 491 HEQQSSEQESIFGS 504
             ++ +E E ++GS
Sbjct: 117 KNKKQTETEMLYGS 130
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query588
3nrx_A130 Protein regulator of cytokinesis 1; spectrin fold, 100.0
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A Back     alignment and structure
Probab=100.00  E-value=1.2e-38  Score=286.90  Aligned_cols=126  Identities=32%  Similarity=0.532  Sum_probs=117.1

Q ss_pred             HHHHHHHHhhhHHHHHHHHHHHHhHHHHHHHHHcCCchhhhccccchhhchHHHHHHHHhhh-hHHHHHHHHHHHHHHHH
Q 007822          372 AKAKEEAHSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNK-IPALVETLVAKTRAWEE  450 (588)
Q Consensus       372 ~~lke~~~~~k~Il~~vekw~~l~~ee~~Le~~~~D~nR~~~~RG~~~~LlreEK~Rk~i~K-lPkl~~~L~~~l~~wE~  450 (588)
                      ++|+++|.+|++||++|++|..+|.+...||+|++|||||+ ||||  +|++|||+|++|+| ||+|++.|+++|.+||.
T Consensus         3 ~rLk~~y~~~k~Ile~vekweelw~~~~eLE~~~~D~sR~~-~Rgg--~LlreEK~Rk~i~k~lP~l~~~L~~~i~~wE~   79 (130)
T 3nrx_A            3 AALKNYYEVHKELFEGVQKWEETWRLFLEFERKASDPNRFT-NRGG--NLLKEEKQRAKLQKMLPKLEEELKARIELWEQ   79 (130)
T ss_dssp             CHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHcCChhhhh-ccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999 8999  99999999999999 99999999999999999


Q ss_pred             HcCCceEEcCccHHHHHH-HHHHHHHHHHHHHHHhHHhhhhhhhhhhhhhcccCC
Q 007822          451 DHGISFTYDGVPLLAMLD-EYAMLRQEREEEKRRMRESKKFHEQQSSEQESIFGS  504 (588)
Q Consensus       451 e~g~~Fl~dG~~ll~~l~-e~~~~r~eKE~ek~~~R~~kk~~~~~~~e~e~~~gs  504 (588)
                      ++|.||+|||++|+++|+ +|+.+|++||+||++ |++||..   ++|+||+|||
T Consensus        80 e~g~~Flv~G~~~le~l~eqw~~~r~~KE~eK~~-R~~kk~~---~~e~e~~~gs  130 (130)
T 3nrx_A           80 EHSKAFMVNGQKFMEYVAEQWEMHRLEKERAKQE-RQLKNKK---QTETEMLYGS  130 (130)
T ss_dssp             HHTSCCEETTEEHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHCC
T ss_pred             HcCCeeeEcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHhccCC
Confidence            999999999999999998 599999999999999 9999984   8999999998

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00